PDB Short entry for 5DAL HEADER TRANSFERASE 20-AUG-15 5DAL TITLE CRYSTAL STRUCTURE OF HUMAN GLUTATHIONE TRANSFERASE PI COMPLEXED WITH A TITLE 2 METALLOID IN THE PRESENCE OF GLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE P; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GST CLASS-PI,GSTP1-1; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GLUTATHIONE S-TRANSFERASE P; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: GST CLASS-PI,GSTP1-1; COMPND 11 EC: 2.5.1.18; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSTP1, FAEES3, GST3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: GSTP1, FAEES3, GST3; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, METALLOID, ANTI-CANCER EXPDTA X-RAY DIFFRACTION AUTHOR L.J.PARKER,M.W.PARKER,C.J.MORTON REVDAT 3 15-NOV-23 5DAL 1 REMARK REVDAT 2 27-SEP-23 5DAL 1 REMARK REVDAT 1 07-DEC-16 5DAL 0 JRNL AUTH L.J.PARKER,M.W.PARKER,C.J.MORTON,A.BOCEDI,D.B.ASCHER, JRNL AUTH 2 J.B.AITKEN,H.H.HARRIS,M.LO BELLO,G.RICCI JRNL TITL VISUALISATION OF ORGANOARSENIC HUMAN GLUTATHIONE TRANSFERASE JRNL TITL 2 P1-1 COMPLEXES: METABOLISM OF ARSENIC-BASED THERAPEUTICS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 74359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.0087 - 4.4406 0.94 2660 131 0.2043 0.1842 REMARK 3 2 4.4406 - 3.5258 1.00 2722 147 0.1552 0.1960 REMARK 3 3 3.5258 - 3.0804 1.00 2742 155 0.1695 0.2052 REMARK 3 4 3.0804 - 2.7989 1.00 2753 137 0.1743 0.2195 REMARK 3 5 2.7989 - 2.5984 1.00 2735 144 0.1622 0.1991 REMARK 3 6 2.5984 - 2.4453 1.00 2731 143 0.1502 0.1992 REMARK 3 7 2.4453 - 2.3228 1.00 2759 131 0.1569 0.2126 REMARK 3 8 2.3228 - 2.2217 1.00 2695 156 0.1569 0.2105 REMARK 3 9 2.2217 - 2.1362 1.00 2729 141 0.1612 0.1897 REMARK 3 10 2.1362 - 2.0625 1.00 2714 132 0.1748 0.1846 REMARK 3 11 2.0625 - 1.9980 1.00 2780 137 0.1802 0.2262 REMARK 3 12 1.9980 - 1.9409 1.00 2727 137 0.1725 0.2104 REMARK 3 13 1.9409 - 1.8898 1.00 2694 141 0.1773 0.2058 REMARK 3 14 1.8898 - 1.8437 1.00 2694 169 0.1891 0.2001 REMARK 3 15 1.8437 - 1.8018 1.00 2686 139 0.1866 0.2544 REMARK 3 16 1.8018 - 1.7635 1.00 2724 153 0.1975 0.2530 REMARK 3 17 1.7635 - 1.7282 1.00 2728 132 0.1924 0.2194 REMARK 3 18 1.7282 - 1.6956 1.00 2711 139 0.1998 0.2294 REMARK 3 19 1.6956 - 1.6653 1.00 2691 166 0.2035 0.2607 REMARK 3 20 1.6653 - 1.6371 1.00 2718 132 0.2112 0.2518 REMARK 3 21 1.6371 - 1.6107 1.00 2725 123 0.2260 0.2475 REMARK 3 22 1.6107 - 1.5859 1.00 2751 147 0.2304 0.2577 REMARK 3 23 1.5859 - 1.5626 0.99 2683 127 0.2296 0.2593 REMARK 3 24 1.5626 - 1.5406 0.99 2768 135 0.2507 0.2619 REMARK 3 25 1.5406 - 1.5197 0.99 2647 137 0.2641 0.3192 REMARK 3 26 1.5197 - 1.5000 0.99 2719 142 0.2782 0.2938 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3535 REMARK 3 ANGLE : 1.396 4792 REMARK 3 CHIRALITY : 0.112 521 REMARK 3 PLANARITY : 0.007 622 REMARK 3 DIHEDRAL : 20.074 1375 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DAL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212935. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74367 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 35.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.78700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.3 REMARK 200 STARTING MODEL: PDB ENTRY 5GSS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES, PH 6.0, 28% (W/V) PEG 8000, REMARK 280 20MM CACL2, 10MM DTT, 10MM GSH. SOAKED IN 2MM PAO DISSOLVED IN REMARK 280 DMSO, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.77500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.11000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.77500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.11000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 613 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 52 HN15 5AU A 302 1.54 REMARK 500 O LEU B 52 HN15 5AU B 303 1.59 REMARK 500 HE22 GLN A 137 O HOH A 404 1.59 REMARK 500 O HOH B 413 O HOH B 495 2.06 REMARK 500 O HOH B 404 O HOH B 521 2.13 REMARK 500 O HOH A 531 O HOH A 549 2.16 REMARK 500 O HOH A 565 O HOH A 602 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 599 O HOH B 502 4747 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 74 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 74 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 64 110.54 90.45 REMARK 500 TYR A 79 37.07 -142.27 REMARK 500 ASN A 110 34.92 -160.52 REMARK 500 THR A 141 -100.84 -120.30 REMARK 500 GLN B 64 111.03 84.05 REMARK 500 TYR B 79 34.89 -142.03 REMARK 500 ASN B 110 40.29 -162.35 REMARK 500 THR B 141 -100.44 -118.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 634 DISTANCE = 6.43 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PA0 A 304 REMARK 610 PA0 B 305 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5AU A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PA0 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5AU B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PA0 B 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DAK RELATED DB: PDB REMARK 900 RELATED ID: 5DCG RELATED DB: PDB REMARK 900 RELATED ID: 5DDL RELATED DB: PDB DBREF 5DAL A 0 209 UNP P09211 GSTP1_HUMAN 1 210 DBREF 5DAL B 0 209 UNP P09211 GSTP1_HUMAN 1 210 SEQRES 1 A 210 MET PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY SEQRES 2 A 210 ARG CSO ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY SEQRES 3 A 210 GLN SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP SEQRES 4 A 210 GLN GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN SEQRES 5 A 210 LEU PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SEQRES 6 A 210 SER ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY SEQRES 7 A 210 LEU TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP SEQRES 8 A 210 MET VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR SEQRES 9 A 210 ILE SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP SEQRES 10 A 210 ASP TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE SEQRES 11 A 210 GLU THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE SEQRES 12 A 210 ILE VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU SEQRES 13 A 210 LEU ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY SEQRES 14 A 210 CYS LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY SEQRES 15 A 210 ARG LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SEQRES 16 A 210 SER PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY SEQRES 17 A 210 LYS GLN SEQRES 1 B 210 MET PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY SEQRES 2 B 210 ARG CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY SEQRES 3 B 210 GLN SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP SEQRES 4 B 210 GLN GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN SEQRES 5 B 210 LEU PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SEQRES 6 B 210 SER ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY SEQRES 7 B 210 LEU TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP SEQRES 8 B 210 MET VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR SEQRES 9 B 210 ILE SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP SEQRES 10 B 210 ASP TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE SEQRES 11 B 210 GLU THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE SEQRES 12 B 210 ILE VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU SEQRES 13 B 210 LEU ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY SEQRES 14 B 210 CYS LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY SEQRES 15 B 210 ARG LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SEQRES 16 B 210 SER PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY SEQRES 17 B 210 LYS GLN MODRES 5DAL CSO A 14 CYS MODIFIED RESIDUE HET CSO A 14 7 HET MES A 301 25 HET 5AU A 302 80 HET GSH A 303 35 HET PA0 A 304 12 HET MES B 301 25 HET SO4 B 302 5 HET 5AU B 303 80 HET GSH B 304 35 HET PA0 B 305 12 HETNAM CSO S-HYDROXYCYSTEINE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM 5AU DI-GLUTATHIONE-PHENYLARSINE HETNAM GSH GLUTATHIONE HETNAM PA0 PHENYLARSINE OXIDE HETNAM SO4 SULFATE ION HETSYN PA0 OXO(PHENYL)ARSANE FORMUL 1 CSO C3 H7 N O3 S FORMUL 3 MES 2(C6 H13 N O4 S) FORMUL 4 5AU 2(C26 H37 AS N6 O12 S2) FORMUL 5 GSH 2(C10 H17 N3 O6 S) FORMUL 6 PA0 2(C6 H5 AS O) FORMUL 8 SO4 O4 S 2- FORMUL 12 HOH *480(H2 O) HELIX 1 AA1 ARG A 11 ARG A 13 5 3 HELIX 2 AA2 CSO A 14 GLN A 24 1 11 HELIX 3 AA3 THR A 34 GLU A 40 1 7 HELIX 4 AA4 GLY A 41 CYS A 47 1 7 HELIX 5 AA5 GLN A 64 LEU A 76 1 13 HELIX 6 AA6 ASP A 82 ASN A 110 1 29 HELIX 7 AA7 ASN A 110 GLN A 135 1 26 HELIX 8 AA8 ASN A 136 LYS A 140 5 5 HELIX 9 AA9 SER A 149 ALA A 166 1 18 HELIX 10 AB1 GLY A 168 ALA A 172 5 5 HELIX 11 AB2 PHE A 173 ALA A 185 1 13 HELIX 12 AB3 ARG A 186 SER A 195 1 10 HELIX 13 AB4 SER A 195 ASN A 200 1 6 HELIX 14 AB5 ARG B 11 ARG B 13 5 3 HELIX 15 AB6 CYS B 14 GLN B 24 1 11 HELIX 16 AB7 THR B 34 GLY B 41 1 8 HELIX 17 AB8 GLY B 41 CYS B 47 1 7 HELIX 18 AB9 GLN B 64 GLY B 77 1 14 HELIX 19 AC1 ASP B 82 ASN B 110 1 29 HELIX 20 AC2 ASN B 110 GLN B 135 1 26 HELIX 21 AC3 ASN B 136 LYS B 140 5 5 HELIX 22 AC4 SER B 149 ALA B 166 1 18 HELIX 23 AC5 PHE B 173 ALA B 185 1 13 HELIX 24 AC6 ARG B 186 SER B 195 1 10 HELIX 25 AC7 SER B 195 ASN B 200 1 6 SHEET 1 AA1 4 TRP A 28 VAL A 32 0 SHEET 2 AA1 4 TYR A 3 TYR A 7 1 N VAL A 5 O GLU A 31 SHEET 3 AA1 4 LYS A 54 ASP A 57 -1 O LYS A 54 N VAL A 6 SHEET 4 AA1 4 LEU A 60 TYR A 63 -1 O LEU A 62 N PHE A 55 SHEET 1 AA2 4 TRP B 28 VAL B 32 0 SHEET 2 AA2 4 TYR B 3 TYR B 7 1 N VAL B 5 O GLU B 31 SHEET 3 AA2 4 LYS B 54 ASP B 57 -1 O LYS B 54 N VAL B 6 SHEET 4 AA2 4 LEU B 60 TYR B 63 -1 O LEU B 62 N PHE B 55 LINK C ARG A 13 N CSO A 14 1555 1555 1.34 LINK C CSO A 14 N ALA A 15 1555 1555 1.33 CISPEP 1 LEU A 52 PRO A 53 0 7.82 CISPEP 2 PRO B 1 PRO B 2 0 0.55 CISPEP 3 LEU B 52 PRO B 53 0 7.39 SITE 1 AC1 5 ALA A 22 TRP A 28 GLU A 197 HOH A 401 SITE 2 AC1 5 HOH A 457 SITE 1 AC2 23 TYR A 7 PHE A 8 VAL A 10 ARG A 13 SITE 2 AC2 23 TRP A 38 LYS A 44 GLN A 51 LEU A 52 SITE 3 AC2 23 PRO A 53 GLN A 64 SER A 65 ILE A 104 SITE 4 AC2 23 TYR A 108 GSH A 303 PA0 A 304 HOH A 412 SITE 5 AC2 23 HOH A 415 HOH A 460 HOH A 469 HOH A 481 SITE 6 AC2 23 HOH A 509 HOH A 527 ASP B 98 SITE 1 AC3 13 PHE A 8 ARG A 13 TRP A 38 LYS A 44 SITE 2 AC3 13 GLN A 51 LEU A 52 PRO A 53 GLN A 64 SITE 3 AC3 13 SER A 65 5AU A 302 HOH A 469 HOH A 481 SITE 4 AC3 13 ASP B 98 SITE 1 AC4 2 CYS A 101 5AU A 302 SITE 1 AC5 6 HOH A 402 ALA B 22 TRP B 28 GLU B 197 SITE 2 AC5 6 SO4 B 302 HOH B 476 SITE 1 AC6 3 SER B 27 TRP B 28 MES B 301 SITE 1 AC7 22 ASP A 98 TYR B 7 PHE B 8 VAL B 10 SITE 2 AC7 22 ARG B 13 TRP B 38 LYS B 44 GLN B 51 SITE 3 AC7 22 LEU B 52 PRO B 53 GLN B 64 SER B 65 SITE 4 AC7 22 ILE B 104 TYR B 108 GLY B 205 GSH B 304 SITE 5 AC7 22 PA0 B 305 HOH B 420 HOH B 421 HOH B 455 SITE 6 AC7 22 HOH B 485 HOH B 504 SITE 1 AC8 15 ASP A 98 ARG B 13 TRP B 38 LYS B 44 SITE 2 AC8 15 GLY B 50 GLN B 51 LEU B 52 PRO B 53 SITE 3 AC8 15 GLN B 64 SER B 65 5AU B 303 HOH B 421 SITE 4 AC8 15 HOH B 485 HOH B 504 HOH B 548 SITE 1 AC9 2 CYS B 101 5AU B 303 CRYST1 77.550 90.220 68.670 90.00 98.01 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012895 0.000000 0.001815 0.00000 SCALE2 0.000000 0.011084 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014706 0.00000