PDB Short entry for 5ED1 HEADER HYDROLASE/RNA 20-OCT-15 5ED1 TITLE HUMAN ADENOSINE DEAMINASE ACTING ON DSRNA (ADAR2) MUTANT E488Q BOUND TITLE 2 TO DSRNA SEQUENCE DERIVED FROM S. CEREVISIAE BDF2 GENE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: A TO I EDITASE (UNP RESIDUES 327-729); COMPND 5 SYNONYM: ADENOSINE DEAMINASE ACTING ON RNA; COMPND 6 EC: 3.5.4.37; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: RNA (5'-R(*UP*UP*CP*CP*CP*CP*AP*CP*AP*UP*UP*(8AZ) COMPND 11 P*GP*AP*CP*GP*UP*UP*CP*AP*GP*UP*C)-3'); COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: RNA (5'- COMPND 16 R(*GP*AP*CP*UP*GP*AP*AP*CP*GP*AP*CP*CP*AP*AP*UP*GP*UP*GP*GP*GP*GP*AP* COMPND 17 A)-3'); COMPND 18 CHAIN: C; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADAR2, DRADA2, RED1; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_COMMON: YEAST; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BCY123; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSC; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 15 ORGANISM_COMMON: YEAST; SOURCE 16 ORGANISM_TAXID: 4932; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 20 ORGANISM_COMMON: YEAST; SOURCE 21 ORGANISM_TAXID: 4932 KEYWDS DEAMINASE, HUMAN, HYDROLASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.M.MATTHEWS,A.J.FISHER,P.A.BEAL REVDAT 8 27-SEP-23 5ED1 1 REMARK REVDAT 7 10-FEB-21 5ED1 1 REMARK REVDAT 6 14-OCT-20 5ED1 1 HETSYN LINK REVDAT 5 25-DEC-19 5ED1 1 REMARK REVDAT 4 13-SEP-17 5ED1 1 REMARK REVDAT 3 18-MAY-16 5ED1 1 JRNL REVDAT 2 27-APR-16 5ED1 1 JRNL REVDAT 1 13-APR-16 5ED1 0 JRNL AUTH M.M.MATTHEWS,J.M.THOMAS,Y.ZHENG,K.TRAN,K.J.PHELPS,A.I.SCOTT, JRNL AUTH 2 J.HAVEL,A.J.FISHER,P.A.BEAL JRNL TITL STRUCTURES OF HUMAN ADAR2 BOUND TO DSRNA REVEAL JRNL TITL 2 BASE-FLIPPING MECHANISM AND BASIS FOR SITE SELECTIVITY. JRNL REF NAT.STRUCT.MOL.BIOL. V. 23 426 2016 JRNL REFN ESSN 1545-9985 JRNL PMID 27065196 JRNL DOI 10.1038/NSMB.3203 REMARK 2 REMARK 2 RESOLUTION. 2.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 27153 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1352 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 80.4262 - 5.9671 0.92 2593 156 0.1468 0.1996 REMARK 3 2 5.9671 - 4.7364 0.95 2576 136 0.1449 0.1801 REMARK 3 3 4.7364 - 4.1377 0.97 2581 139 0.1275 0.1943 REMARK 3 4 4.1377 - 3.7594 0.96 2522 151 0.1458 0.2183 REMARK 3 5 3.7594 - 3.4899 0.98 2597 122 0.1675 0.2361 REMARK 3 6 3.4899 - 3.2842 0.99 2596 138 0.1795 0.2580 REMARK 3 7 3.2842 - 3.1197 0.98 2579 134 0.1969 0.2725 REMARK 3 8 3.1197 - 2.9839 0.97 2554 128 0.2321 0.3172 REMARK 3 9 2.9839 - 2.8690 0.99 2601 126 0.2406 0.3175 REMARK 3 10 2.8690 - 2.7700 0.99 2602 122 0.2529 0.3049 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7492 REMARK 3 ANGLE : 1.342 10365 REMARK 3 CHIRALITY : 0.052 1195 REMARK 3 PLANARITY : 0.007 1151 REMARK 3 DIHEDRAL : 15.826 2950 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 305:315) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8184 -19.9286 16.8133 REMARK 3 T TENSOR REMARK 3 T11: 0.8983 T22: 0.9546 REMARK 3 T33: 0.4970 T12: -0.0107 REMARK 3 T13: -0.1805 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 8.9628 L22: 2.0014 REMARK 3 L33: 2.0067 L12: 9.4785 REMARK 3 L13: 5.1305 L23: 7.5236 REMARK 3 S TENSOR REMARK 3 S11: -0.5714 S12: -0.0773 S13: 1.4697 REMARK 3 S21: -0.0854 S22: -0.3554 S23: -0.2389 REMARK 3 S31: -0.1182 S32: -0.3546 S33: 0.9202 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 316:405) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9089 -22.4565 39.9318 REMARK 3 T TENSOR REMARK 3 T11: 0.3546 T22: 0.6212 REMARK 3 T33: 0.4068 T12: -0.0959 REMARK 3 T13: 0.0228 T23: 0.0753 REMARK 3 L TENSOR REMARK 3 L11: 2.6742 L22: 4.1592 REMARK 3 L33: 3.4135 L12: -0.2697 REMARK 3 L13: 0.8819 L23: 1.3413 REMARK 3 S TENSOR REMARK 3 S11: 0.0708 S12: -0.1278 S13: 0.0510 REMARK 3 S21: -0.1072 S22: -0.2381 S23: 0.8598 REMARK 3 S31: 0.4292 S32: -0.9734 S33: 0.1549 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 406:466) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0317 -29.7852 32.3149 REMARK 3 T TENSOR REMARK 3 T11: 0.4919 T22: 0.5464 REMARK 3 T33: 0.3362 T12: -0.2224 REMARK 3 T13: -0.0131 T23: 0.0480 REMARK 3 L TENSOR REMARK 3 L11: 2.4304 L22: 7.9904 REMARK 3 L33: 2.1772 L12: -1.5191 REMARK 3 L13: 0.0554 L23: 0.2216 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: 0.0082 S13: -0.5182 REMARK 3 S21: -0.3289 S22: 0.0223 S23: 0.8322 REMARK 3 S31: 0.6188 S32: -0.5003 S33: -0.0924 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 467:497) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7537 -2.3855 29.3692 REMARK 3 T TENSOR REMARK 3 T11: 0.3948 T22: 0.3046 REMARK 3 T33: 0.3961 T12: -0.0771 REMARK 3 T13: -0.0260 T23: 0.1113 REMARK 3 L TENSOR REMARK 3 L11: 4.5291 L22: 8.3295 REMARK 3 L33: 9.2631 L12: -2.0280 REMARK 3 L13: -0.3298 L23: -1.9721 REMARK 3 S TENSOR REMARK 3 S11: -0.1444 S12: 0.4536 S13: 0.3843 REMARK 3 S21: -0.5145 S22: 0.3445 S23: 0.5178 REMARK 3 S31: -0.0078 S32: -0.1626 S33: -0.2594 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 498:587) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4973 -17.9129 30.7696 REMARK 3 T TENSOR REMARK 3 T11: 0.2658 T22: 0.3323 REMARK 3 T33: 0.2651 T12: -0.0544 REMARK 3 T13: 0.0122 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 1.1125 L22: 2.7267 REMARK 3 L33: 2.9331 L12: 0.3538 REMARK 3 L13: 0.8440 L23: 0.0470 REMARK 3 S TENSOR REMARK 3 S11: -0.1012 S12: 0.0996 S13: 0.0599 REMARK 3 S21: -0.3801 S22: 0.1441 S23: 0.1596 REMARK 3 S31: -0.0575 S32: -0.2972 S33: -0.0382 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 588:644) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2264 -23.9115 48.8138 REMARK 3 T TENSOR REMARK 3 T11: 0.4187 T22: 0.5308 REMARK 3 T33: 0.4063 T12: -0.0758 REMARK 3 T13: 0.0708 T23: 0.0960 REMARK 3 L TENSOR REMARK 3 L11: 2.5158 L22: 3.3799 REMARK 3 L33: 3.8027 L12: -1.9135 REMARK 3 L13: -0.0693 L23: 1.6088 REMARK 3 S TENSOR REMARK 3 S11: -0.1854 S12: -0.3986 S13: -0.2774 REMARK 3 S21: 0.2123 S22: 0.2211 S23: 0.5132 REMARK 3 S31: 0.3072 S32: -0.6638 S33: 0.0002 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 645:700) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1579 -23.7691 37.4308 REMARK 3 T TENSOR REMARK 3 T11: 0.3050 T22: 0.3918 REMARK 3 T33: 0.3672 T12: 0.0253 REMARK 3 T13: 0.0477 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.5428 L22: 3.8573 REMARK 3 L33: 5.6168 L12: -0.5527 REMARK 3 L13: 1.3506 L23: -0.8372 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: 0.1881 S13: -0.1412 REMARK 3 S21: -0.0164 S22: -0.1000 S23: -0.2654 REMARK 3 S31: 0.7065 S32: 0.1660 S33: 0.0869 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN D AND RESID 304:405) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3194 -45.3035 -1.5402 REMARK 3 T TENSOR REMARK 3 T11: 0.6882 T22: 0.4032 REMARK 3 T33: 0.4280 T12: -0.0368 REMARK 3 T13: -0.1431 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 4.8325 L22: 1.9081 REMARK 3 L33: 6.5539 L12: -0.2214 REMARK 3 L13: -0.0302 L23: 0.5626 REMARK 3 S TENSOR REMARK 3 S11: -0.1450 S12: 0.8637 S13: 0.2852 REMARK 3 S21: -0.5990 S22: 0.0745 S23: 0.0926 REMARK 3 S31: -0.5007 S32: 0.2426 S33: 0.0553 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN D AND RESID 406:462) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6287 -45.0325 -8.2264 REMARK 3 T TENSOR REMARK 3 T11: 0.8009 T22: 0.6557 REMARK 3 T33: 0.5210 T12: 0.0992 REMARK 3 T13: -0.2604 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 6.5286 L22: 2.2477 REMARK 3 L33: 3.2193 L12: -2.3651 REMARK 3 L13: 2.4662 L23: -1.3003 REMARK 3 S TENSOR REMARK 3 S11: 0.1175 S12: 0.7157 S13: 0.6153 REMARK 3 S21: -0.9109 S22: -0.3789 S23: 0.3053 REMARK 3 S31: -0.4202 S32: -0.4573 S33: 0.2361 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN D AND RESID 463:468) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0932 -76.1758 -4.7161 REMARK 3 T TENSOR REMARK 3 T11: 1.7616 T22: 0.7069 REMARK 3 T33: 1.1612 T12: -0.1179 REMARK 3 T13: -0.2513 T23: -0.2153 REMARK 3 L TENSOR REMARK 3 L11: 0.4024 L22: 7.7585 REMARK 3 L33: 3.6428 L12: -1.6032 REMARK 3 L13: -0.0605 L23: 2.4747 REMARK 3 S TENSOR REMARK 3 S11: -0.1724 S12: 0.1678 S13: -0.4435 REMARK 3 S21: -1.9091 S22: -0.3963 S23: 0.8846 REMARK 3 S31: 0.9670 S32: -0.4015 S33: 0.5148 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN D AND RESID 469:475) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5430 -82.3116 0.1310 REMARK 3 T TENSOR REMARK 3 T11: 2.3295 T22: 1.1112 REMARK 3 T33: 1.2469 T12: 0.0989 REMARK 3 T13: -0.5680 T23: -0.3406 REMARK 3 L TENSOR REMARK 3 L11: 3.2966 L22: 1.7450 REMARK 3 L33: 2.7304 L12: 2.3799 REMARK 3 L13: 0.4727 L23: 0.6381 REMARK 3 S TENSOR REMARK 3 S11: 0.8938 S12: -0.1528 S13: -1.2336 REMARK 3 S21: 1.1713 S22: 0.2454 S23: -0.5864 REMARK 3 S31: 2.3690 S32: 0.6047 S33: -1.1148 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN D AND RESID 476:496) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6391 -63.6179 12.5074 REMARK 3 T TENSOR REMARK 3 T11: 0.5648 T22: 0.4203 REMARK 3 T33: 0.4628 T12: 0.0120 REMARK 3 T13: -0.0408 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 8.4043 L22: 6.5196 REMARK 3 L33: 2.0673 L12: 2.3411 REMARK 3 L13: -1.9199 L23: -0.9700 REMARK 3 S TENSOR REMARK 3 S11: 0.0896 S12: -0.6393 S13: -0.4166 REMARK 3 S21: 1.0365 S22: -0.0491 S23: -0.2325 REMARK 3 S31: 0.2625 S32: 0.3030 S33: -0.0599 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN D AND RESID 497:562) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1711 -55.8259 3.3030 REMARK 3 T TENSOR REMARK 3 T11: 0.5767 T22: 0.4064 REMARK 3 T33: 0.4373 T12: -0.0371 REMARK 3 T13: -0.2056 T23: -0.0823 REMARK 3 L TENSOR REMARK 3 L11: 5.6953 L22: 2.7937 REMARK 3 L33: 2.6575 L12: -0.7058 REMARK 3 L13: -0.9788 L23: 0.7463 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: 0.1699 S13: -0.1593 REMARK 3 S21: -0.0111 S22: -0.2454 S23: 0.3807 REMARK 3 S31: 0.1889 S32: -0.3235 S33: 0.3147 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN D AND RESID 563:700) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8011 -48.2567 4.2320 REMARK 3 T TENSOR REMARK 3 T11: 0.5201 T22: 0.5651 REMARK 3 T33: 0.5442 T12: 0.1011 REMARK 3 T13: -0.1994 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 2.7365 L22: 2.8285 REMARK 3 L33: 3.6298 L12: -0.4177 REMARK 3 L13: 0.3807 L23: 0.9128 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: -0.1142 S13: 0.2530 REMARK 3 S21: -0.3397 S22: -0.2409 S23: 0.6474 REMARK 3 S31: -0.5821 S32: -0.9568 S33: 0.2949 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0007 8.2196 17.7963 REMARK 3 T TENSOR REMARK 3 T11: 1.0845 T22: 0.6077 REMARK 3 T33: 0.5160 T12: -0.2105 REMARK 3 T13: -0.0974 T23: -0.0652 REMARK 3 L TENSOR REMARK 3 L11: 7.2840 L22: 9.3886 REMARK 3 L33: 7.7888 L12: -5.3586 REMARK 3 L13: -3.8448 L23: 5.3229 REMARK 3 S TENSOR REMARK 3 S11: 1.6581 S12: -1.2385 S13: 0.8295 REMARK 3 S21: -0.0730 S22: -1.5833 S23: 0.1421 REMARK 3 S31: 0.3523 S32: -1.0945 S33: -0.0636 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 5:8) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7640 16.7400 29.0435 REMARK 3 T TENSOR REMARK 3 T11: 1.2131 T22: 0.8025 REMARK 3 T33: 0.7874 T12: -0.1095 REMARK 3 T13: 0.1084 T23: -0.0812 REMARK 3 L TENSOR REMARK 3 L11: 6.3930 L22: 2.0067 REMARK 3 L33: 6.0601 L12: 2.7379 REMARK 3 L13: 6.1055 L23: 1.0560 REMARK 3 S TENSOR REMARK 3 S11: -0.1919 S12: -0.5422 S13: 0.7720 REMARK 3 S21: 0.8482 S22: 0.2379 S23: 0.7259 REMARK 3 S31: -0.7101 S32: 1.3787 S33: -0.1152 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN B AND RESID 9:14) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3351 0.8120 39.8303 REMARK 3 T TENSOR REMARK 3 T11: 0.5363 T22: 0.5684 REMARK 3 T33: 0.4982 T12: 0.1400 REMARK 3 T13: 0.1315 T23: 0.1094 REMARK 3 L TENSOR REMARK 3 L11: 7.7771 L22: 8.3302 REMARK 3 L33: 9.2535 L12: -0.4430 REMARK 3 L13: 3.0246 L23: -2.5941 REMARK 3 S TENSOR REMARK 3 S11: -0.0537 S12: 0.1179 S13: 0.7165 REMARK 3 S21: 0.2075 S22: 0.4701 S23: 0.5913 REMARK 3 S31: -1.3100 S32: -1.2643 S33: -0.2564 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN B AND RESID 15:19) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7585 5.3932 58.1944 REMARK 3 T TENSOR REMARK 3 T11: 1.1695 T22: 0.9930 REMARK 3 T33: 0.7526 T12: 0.3697 REMARK 3 T13: 0.2889 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.3473 L22: 4.3390 REMARK 3 L33: 8.4442 L12: 1.4884 REMARK 3 L13: -1.5849 L23: 2.4371 REMARK 3 S TENSOR REMARK 3 S11: -0.0244 S12: -0.2339 S13: 0.3185 REMARK 3 S21: 2.0996 S22: -0.1607 S23: 1.5619 REMARK 3 S31: -1.2681 S32: -0.7663 S33: 0.1354 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN B AND RESID 20:23) REMARK 3 ORIGIN FOR THE GROUP (A): -34.7884 -7.1153 64.5784 REMARK 3 T TENSOR REMARK 3 T11: 1.4173 T22: 1.4249 REMARK 3 T33: 0.6736 T12: 0.2085 REMARK 3 T13: 0.1878 T23: 0.1623 REMARK 3 L TENSOR REMARK 3 L11: 6.6058 L22: 7.3617 REMARK 3 L33: 8.7448 L12: 1.5461 REMARK 3 L13: -1.0927 L23: 7.4865 REMARK 3 S TENSOR REMARK 3 S11: 1.0475 S12: 1.4897 S13: 0.7752 REMARK 3 S21: -1.0780 S22: -0.2341 S23: 0.3773 REMARK 3 S31: -0.4833 S32: -2.0112 S33: -0.8047 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN C AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3983 -7.9216 62.8814 REMARK 3 T TENSOR REMARK 3 T11: 1.3466 T22: 1.4318 REMARK 3 T33: 0.6267 T12: 0.0834 REMARK 3 T13: 0.1962 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 7.7242 L22: 9.1414 REMARK 3 L33: 9.3978 L12: -4.3238 REMARK 3 L13: 6.0184 L23: -4.7971 REMARK 3 S TENSOR REMARK 3 S11: 1.0271 S12: 1.5350 S13: 0.4277 REMARK 3 S21: -1.9912 S22: -1.1428 S23: -0.4609 REMARK 3 S31: -1.2815 S32: 0.6307 S33: 0.0924 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: (CHAIN C AND RESID 5:9) REMARK 3 ORIGIN FOR THE GROUP (A): -31.4188 3.6750 52.0829 REMARK 3 T TENSOR REMARK 3 T11: 1.4149 T22: 2.0351 REMARK 3 T33: 0.8831 T12: 0.7000 REMARK 3 T13: 0.2336 T23: 0.4156 REMARK 3 L TENSOR REMARK 3 L11: 4.4841 L22: 6.8647 REMARK 3 L33: 2.0106 L12: -1.4245 REMARK 3 L13: 3.1478 L23: -9.0733 REMARK 3 S TENSOR REMARK 3 S11: 0.5366 S12: 1.4657 S13: 0.7522 REMARK 3 S21: -0.6666 S22: 1.6807 S23: 1.2652 REMARK 3 S31: 0.0583 S32: -2.4432 S33: -2.1839 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: (CHAIN C AND RESID 10:13) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9016 7.8585 44.0085 REMARK 3 T TENSOR REMARK 3 T11: 0.7007 T22: 0.5799 REMARK 3 T33: 0.6792 T12: 0.1632 REMARK 3 T13: 0.1300 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 2.0140 L22: 7.2833 REMARK 3 L33: 2.0055 L12: 4.3514 REMARK 3 L13: 5.6104 L23: -3.7090 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: -0.9310 S13: 1.3690 REMARK 3 S21: 0.0841 S22: -0.0098 S23: 1.1439 REMARK 3 S31: -1.5667 S32: -1.0068 S33: 0.0541 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: (CHAIN C AND RESID 14:19) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8848 8.4501 26.1642 REMARK 3 T TENSOR REMARK 3 T11: 0.8822 T22: 0.6310 REMARK 3 T33: 0.7419 T12: 0.1759 REMARK 3 T13: -0.1406 T23: 0.2572 REMARK 3 L TENSOR REMARK 3 L11: 4.9658 L22: 5.8150 REMARK 3 L33: 8.3662 L12: -3.2136 REMARK 3 L13: 3.9628 L23: -5.9588 REMARK 3 S TENSOR REMARK 3 S11: 0.1709 S12: 0.0392 S13: 0.8237 REMARK 3 S21: -0.7306 S22: 0.3314 S23: 1.1779 REMARK 3 S31: -0.8648 S32: -0.9258 S33: -0.5006 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: (CHAIN C AND RESID 20:23) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9779 17.0198 14.9487 REMARK 3 T TENSOR REMARK 3 T11: 1.5551 T22: 0.6884 REMARK 3 T33: 0.7188 T12: -0.1550 REMARK 3 T13: -0.0069 T23: 0.1091 REMARK 3 L TENSOR REMARK 3 L11: 8.2566 L22: 8.3948 REMARK 3 L33: 4.5835 L12: -4.4943 REMARK 3 L13: -0.3588 L23: 5.2080 REMARK 3 S TENSOR REMARK 3 S11: -0.5180 S12: 0.9490 S13: 1.2178 REMARK 3 S21: 0.1730 S22: 0.7310 S23: -0.1679 REMARK 3 S31: -0.1871 S32: -0.8286 S33: -0.2381 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ED1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000213768. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27727 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 2.930 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.01 REMARK 200 R MERGE FOR SHELL (I) : 0.68500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.520 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.9_1692 REMARK 200 STARTING MODEL: PDB ENTRY 1ZY7 REMARK 200 REMARK 200 REMARK: CUBE-LIKE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES/NAOH, PH 6.5, 9% W/V REMARK 280 PEG3350, 13% GLYCEROL, 0.015 M NAD, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.18100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.54850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.74900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.54850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.18100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.74900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -148.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 53.74900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 60.54850 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 299 REMARK 465 HIS A 300 REMARK 465 LEU A 301 REMARK 465 ASP A 302 REMARK 465 GLN A 303 REMARK 465 THR A 304 REMARK 465 PRO A 701 REMARK 465 LEU D 299 REMARK 465 HIS D 300 REMARK 465 LEU D 301 REMARK 465 ASP D 302 REMARK 465 GLN D 303 REMARK 465 PRO D 701 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 305 CG CD REMARK 470 ARG A 307 CG CD NE CZ NH1 NH2 REMARK 470 THR D 304 OG1 CG2 REMARK 470 PRO D 305 CG CD REMARK 470 SER D 306 OG REMARK 470 ARG D 307 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 465 CG CD OE1 OE2 REMARK 470 ASN D 473 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O24 IHP A 801 O HOH A 901 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 485 NH2 ARG D 590 3555 2.09 REMARK 500 NH1 ARG A 423 O GLU D 313 2445 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 307 46.39 -95.51 REMARK 500 SER A 312 -97.81 -76.19 REMARK 500 LEU A 315 115.59 167.10 REMARK 500 ASP A 362 99.19 -60.62 REMARK 500 SER A 458 82.26 42.62 REMARK 500 ALA A 468 -159.10 -66.82 REMARK 500 ASN A 496 75.22 -101.38 REMARK 500 TYR A 561 -33.30 -163.61 REMARK 500 LEU A 573 -11.96 80.40 REMARK 500 ASN A 656 53.46 -99.67 REMARK 500 ARG D 307 39.52 -96.57 REMARK 500 LEU D 464 40.41 -154.46 REMARK 500 GLU D 465 -83.66 -64.42 REMARK 500 ARG D 470 136.09 -37.31 REMARK 500 ASN D 473 -100.49 -100.13 REMARK 500 TYR D 561 -34.19 -161.30 REMARK 500 LEU D 573 -13.94 80.80 REMARK 500 ASN D 656 -65.10 -105.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS D 475 ALA D 476 34.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 394 ND1 REMARK 620 2 CYS A 451 SG 115.9 REMARK 620 3 CYS A 516 SG 105.3 112.2 REMARK 620 4 8AZ B 12 O6 110.7 115.2 95.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 394 ND1 REMARK 620 2 CYS D 451 SG 110.5 REMARK 620 3 CYS D 516 SG 105.9 111.6 REMARK 620 4 HOH D 905 O 121.9 96.8 110.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IHP A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IHP D 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ED2 RELATED DB: PDB DBREF 5ED1 A 299 701 UNP P78563 RED1_HUMAN 327 729 DBREF 5ED1 B 1 23 PDB 5ED1 5ED1 1 23 DBREF 5ED1 C 1 23 PDB 5ED1 5ED1 1 23 DBREF 5ED1 D 299 701 UNP P78563 RED1_HUMAN 327 729 SEQADV 5ED1 GLN A 488 UNP P78563 GLU 516 ENGINEERED MUTATION SEQADV 5ED1 GLN D 488 UNP P78563 GLU 516 ENGINEERED MUTATION SEQRES 1 A 403 LEU HIS LEU ASP GLN THR PRO SER ARG GLN PRO ILE PRO SEQRES 2 A 403 SER GLU GLY LEU GLN LEU HIS LEU PRO GLN VAL LEU ALA SEQRES 3 A 403 ASP ALA VAL SER ARG LEU VAL LEU GLY LYS PHE GLY ASP SEQRES 4 A 403 LEU THR ASP ASN PHE SER SER PRO HIS ALA ARG ARG LYS SEQRES 5 A 403 VAL LEU ALA GLY VAL VAL MET THR THR GLY THR ASP VAL SEQRES 6 A 403 LYS ASP ALA LYS VAL ILE SER VAL SER THR GLY THR LYS SEQRES 7 A 403 CYS ILE ASN GLY GLU TYR MET SER ASP ARG GLY LEU ALA SEQRES 8 A 403 LEU ASN ASP CYS HIS ALA GLU ILE ILE SER ARG ARG SER SEQRES 9 A 403 LEU LEU ARG PHE LEU TYR THR GLN LEU GLU LEU TYR LEU SEQRES 10 A 403 ASN ASN LYS ASP ASP GLN LYS ARG SER ILE PHE GLN LYS SEQRES 11 A 403 SER GLU ARG GLY GLY PHE ARG LEU LYS GLU ASN VAL GLN SEQRES 12 A 403 PHE HIS LEU TYR ILE SER THR SER PRO CYS GLY ASP ALA SEQRES 13 A 403 ARG ILE PHE SER PRO HIS GLU PRO ILE LEU GLU GLU PRO SEQRES 14 A 403 ALA ASP ARG HIS PRO ASN ARG LYS ALA ARG GLY GLN LEU SEQRES 15 A 403 ARG THR LYS ILE GLU SER GLY GLN GLY THR ILE PRO VAL SEQRES 16 A 403 ARG SER ASN ALA SER ILE GLN THR TRP ASP GLY VAL LEU SEQRES 17 A 403 GLN GLY GLU ARG LEU LEU THR MET SER CYS SER ASP LYS SEQRES 18 A 403 ILE ALA ARG TRP ASN VAL VAL GLY ILE GLN GLY SER LEU SEQRES 19 A 403 LEU SER ILE PHE VAL GLU PRO ILE TYR PHE SER SER ILE SEQRES 20 A 403 ILE LEU GLY SER LEU TYR HIS GLY ASP HIS LEU SER ARG SEQRES 21 A 403 ALA MET TYR GLN ARG ILE SER ASN ILE GLU ASP LEU PRO SEQRES 22 A 403 PRO LEU TYR THR LEU ASN LYS PRO LEU LEU SER GLY ILE SEQRES 23 A 403 SER ASN ALA GLU ALA ARG GLN PRO GLY LYS ALA PRO ASN SEQRES 24 A 403 PHE SER VAL ASN TRP THR VAL GLY ASP SER ALA ILE GLU SEQRES 25 A 403 VAL ILE ASN ALA THR THR GLY LYS ASP GLU LEU GLY ARG SEQRES 26 A 403 ALA SER ARG LEU CYS LYS HIS ALA LEU TYR CYS ARG TRP SEQRES 27 A 403 MET ARG VAL HIS GLY LYS VAL PRO SER HIS LEU LEU ARG SEQRES 28 A 403 SER LYS ILE THR LYS PRO ASN VAL TYR HIS GLU SER LYS SEQRES 29 A 403 LEU ALA ALA LYS GLU TYR GLN ALA ALA LYS ALA ARG LEU SEQRES 30 A 403 PHE THR ALA PHE ILE LYS ALA GLY LEU GLY ALA TRP VAL SEQRES 31 A 403 GLU LYS PRO THR GLU GLN ASP GLN PHE SER LEU THR PRO SEQRES 1 B 23 U U C C C C A C A U U 8AZ G SEQRES 2 B 23 A C G U U C A G U C SEQRES 1 C 23 G A C U G A A C G A C C A SEQRES 2 C 23 A U G U G G G G A A SEQRES 1 D 403 LEU HIS LEU ASP GLN THR PRO SER ARG GLN PRO ILE PRO SEQRES 2 D 403 SER GLU GLY LEU GLN LEU HIS LEU PRO GLN VAL LEU ALA SEQRES 3 D 403 ASP ALA VAL SER ARG LEU VAL LEU GLY LYS PHE GLY ASP SEQRES 4 D 403 LEU THR ASP ASN PHE SER SER PRO HIS ALA ARG ARG LYS SEQRES 5 D 403 VAL LEU ALA GLY VAL VAL MET THR THR GLY THR ASP VAL SEQRES 6 D 403 LYS ASP ALA LYS VAL ILE SER VAL SER THR GLY THR LYS SEQRES 7 D 403 CYS ILE ASN GLY GLU TYR MET SER ASP ARG GLY LEU ALA SEQRES 8 D 403 LEU ASN ASP CYS HIS ALA GLU ILE ILE SER ARG ARG SER SEQRES 9 D 403 LEU LEU ARG PHE LEU TYR THR GLN LEU GLU LEU TYR LEU SEQRES 10 D 403 ASN ASN LYS ASP ASP GLN LYS ARG SER ILE PHE GLN LYS SEQRES 11 D 403 SER GLU ARG GLY GLY PHE ARG LEU LYS GLU ASN VAL GLN SEQRES 12 D 403 PHE HIS LEU TYR ILE SER THR SER PRO CYS GLY ASP ALA SEQRES 13 D 403 ARG ILE PHE SER PRO HIS GLU PRO ILE LEU GLU GLU PRO SEQRES 14 D 403 ALA ASP ARG HIS PRO ASN ARG LYS ALA ARG GLY GLN LEU SEQRES 15 D 403 ARG THR LYS ILE GLU SER GLY GLN GLY THR ILE PRO VAL SEQRES 16 D 403 ARG SER ASN ALA SER ILE GLN THR TRP ASP GLY VAL LEU SEQRES 17 D 403 GLN GLY GLU ARG LEU LEU THR MET SER CYS SER ASP LYS SEQRES 18 D 403 ILE ALA ARG TRP ASN VAL VAL GLY ILE GLN GLY SER LEU SEQRES 19 D 403 LEU SER ILE PHE VAL GLU PRO ILE TYR PHE SER SER ILE SEQRES 20 D 403 ILE LEU GLY SER LEU TYR HIS GLY ASP HIS LEU SER ARG SEQRES 21 D 403 ALA MET TYR GLN ARG ILE SER ASN ILE GLU ASP LEU PRO SEQRES 22 D 403 PRO LEU TYR THR LEU ASN LYS PRO LEU LEU SER GLY ILE SEQRES 23 D 403 SER ASN ALA GLU ALA ARG GLN PRO GLY LYS ALA PRO ASN SEQRES 24 D 403 PHE SER VAL ASN TRP THR VAL GLY ASP SER ALA ILE GLU SEQRES 25 D 403 VAL ILE ASN ALA THR THR GLY LYS ASP GLU LEU GLY ARG SEQRES 26 D 403 ALA SER ARG LEU CYS LYS HIS ALA LEU TYR CYS ARG TRP SEQRES 27 D 403 MET ARG VAL HIS GLY LYS VAL PRO SER HIS LEU LEU ARG SEQRES 28 D 403 SER LYS ILE THR LYS PRO ASN VAL TYR HIS GLU SER LYS SEQRES 29 D 403 LEU ALA ALA LYS GLU TYR GLN ALA ALA LYS ALA ARG LEU SEQRES 30 D 403 PHE THR ALA PHE ILE LYS ALA GLY LEU GLY ALA TRP VAL SEQRES 31 D 403 GLU LYS PRO THR GLU GLN ASP GLN PHE SER LEU THR PRO HET 8AZ B 12 22 HET IHP A 801 36 HET ZN A 802 1 HET IHP D 801 36 HET ZN D 802 1 HETNAM 8AZ 8-AZA-NEBULARINE-5'-MONOPHOSPHATE HETNAM IHP INOSITOL HEXAKISPHOSPHATE HETNAM ZN ZINC ION HETSYN IHP MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6- HETSYN 2 IHP HEXAKISPHOSPHATE FORMUL 2 8AZ C9 H14 N5 O8 P FORMUL 5 IHP 2(C6 H18 O24 P6) FORMUL 6 ZN 2(ZN 2+) FORMUL 9 HOH *33(H2 O) HELIX 1 AA1 LEU A 319 THR A 339 1 21 HELIX 2 AA2 ASN A 379 MET A 383 5 5 HELIX 3 AA3 HIS A 394 ASN A 417 1 24 HELIX 4 AA4 ASN A 417 LYS A 422 1 6 HELIX 5 AA5 THR A 501 GLY A 508 1 8 HELIX 6 AA6 SER A 515 GLY A 527 1 13 HELIX 7 AA7 GLN A 529 ILE A 535 1 7 HELIX 8 AA8 HIS A 552 TYR A 561 1 10 HELIX 9 AA9 GLN A 562 SER A 565 5 4 HELIX 10 AB1 CYS A 628 VAL A 643 1 16 HELIX 11 AB2 PRO A 644 LEU A 648 5 5 HELIX 12 AB3 VAL A 657 ALA A 664 1 8 HELIX 13 AB4 ALA A 665 ALA A 682 1 18 HELIX 14 AB5 PRO A 691 GLN A 696 5 6 HELIX 15 AB6 THR D 304 GLN D 308 5 5 HELIX 16 AB7 LEU D 319 THR D 339 1 21 HELIX 17 AB8 SER D 344 ARG D 348 5 5 HELIX 18 AB9 ASN D 379 MET D 383 5 5 HELIX 19 AC1 ALA D 395 ASN D 417 1 23 HELIX 20 AC2 LYS D 418 GLN D 421 5 4 HELIX 21 AC3 GLY D 452 ILE D 456 5 5 HELIX 22 AC4 THR D 501 LEU D 506 1 6 HELIX 23 AC5 SER D 515 GLY D 527 1 13 HELIX 24 AC6 GLN D 529 SER D 534 1 6 HELIX 25 AC7 HIS D 552 TYR D 561 1 10 HELIX 26 AC8 GLN D 562 SER D 565 5 4 HELIX 27 AC9 CYS D 628 VAL D 643 1 16 HELIX 28 AD1 PRO D 644 LEU D 648 5 5 HELIX 29 AD2 VAL D 657 ALA D 664 1 8 HELIX 30 AD3 ALA D 665 ALA D 682 1 18 HELIX 31 AD4 PRO D 691 GLN D 696 5 6 SHEET 1 AA1 7 LEU A 580 GLY A 583 0 SHEET 2 AA1 7 PHE A 542 LEU A 547 1 N SER A 543 O LEU A 580 SHEET 3 AA1 7 GLN A 441 ILE A 446 1 N LEU A 444 O ILE A 546 SHEET 4 AA1 7 LEU A 352 THR A 358 -1 N GLY A 354 O TYR A 445 SHEET 5 AA1 7 LYS A 367 THR A 373 -1 O LYS A 367 N MET A 357 SHEET 6 AA1 7 PHE A 598 THR A 603 -1 O TRP A 602 N VAL A 371 SHEET 7 AA1 7 GLU A 610 ASN A 613 -1 O ILE A 612 N SER A 599 SHEET 1 AA2 2 PHE A 426 LYS A 428 0 SHEET 2 AA2 2 PHE A 434 LEU A 436 -1 O ARG A 435 N GLN A 427 SHEET 1 AA3 3 THR A 490 PRO A 492 0 SHEET 2 AA3 3 ARG A 481 ILE A 484 -1 N THR A 482 O ILE A 491 SHEET 3 AA3 3 LEU A 512 MET A 514 -1 O THR A 513 N LYS A 483 SHEET 1 AA4 7 LEU D 580 GLY D 583 0 SHEET 2 AA4 7 PHE D 542 LEU D 547 1 N ILE D 545 O LEU D 580 SHEET 3 AA4 7 GLN D 441 ILE D 446 1 N LEU D 444 O ILE D 546 SHEET 4 AA4 7 LEU D 352 THR D 358 -1 N GLY D 354 O TYR D 445 SHEET 5 AA4 7 LYS D 367 THR D 373 -1 O SER D 372 N ALA D 353 SHEET 6 AA4 7 PHE D 598 THR D 603 -1 O TRP D 602 N VAL D 371 SHEET 7 AA4 7 GLU D 610 ASN D 613 -1 O ILE D 612 N SER D 599 SHEET 1 AA5 2 THR D 375 CYS D 377 0 SHEET 2 AA5 2 ASP D 392 HIS D 394 -1 O CYS D 393 N LYS D 376 SHEET 1 AA6 2 PHE D 426 LYS D 428 0 SHEET 2 AA6 2 PHE D 434 LEU D 436 -1 O ARG D 435 N GLN D 427 SHEET 1 AA7 3 THR D 490 PRO D 492 0 SHEET 2 AA7 3 ARG D 481 ILE D 484 -1 N THR D 482 O ILE D 491 SHEET 3 AA7 3 LEU D 512 MET D 514 -1 O THR D 513 N LYS D 483 LINK O3' U B 11 P 8AZ B 12 1555 1555 1.60 LINK O3' 8AZ B 12 P G B 13 1555 1555 1.60 LINK ND1 HIS A 394 ZN ZN A 802 1555 1555 1.95 LINK SG CYS A 451 ZN ZN A 802 1555 1555 2.37 LINK SG CYS A 516 ZN ZN A 802 1555 1555 2.27 LINK ZN ZN A 802 O6 8AZ B 12 1555 1555 2.08 LINK ND1 HIS D 394 ZN ZN D 802 1555 1555 2.03 LINK SG CYS D 451 ZN ZN D 802 1555 1555 2.33 LINK SG CYS D 516 ZN ZN D 802 1555 1555 2.28 LINK ZN ZN D 802 O HOH D 905 1555 1555 1.96 SITE 1 AC1 19 ASN A 391 ILE A 397 ARG A 400 ARG A 401 SITE 2 AC1 19 THR A 513 LYS A 519 ARG A 522 GLY A 530 SITE 3 AC1 19 SER A 531 LYS A 629 TYR A 658 LYS A 662 SITE 4 AC1 19 TYR A 668 LYS A 672 TRP A 687 GLU A 689 SITE 5 AC1 19 LYS A 690 HOH A 901 HOH A 917 SITE 1 AC2 5 HIS A 394 CYS A 451 LYS A 483 CYS A 516 SITE 2 AC2 5 8AZ B 12 SITE 1 AC3 17 ASN D 391 ILE D 397 ARG D 400 ARG D 401 SITE 2 AC3 17 THR D 513 LYS D 519 ARG D 522 GLY D 530 SITE 3 AC3 17 SER D 531 LYS D 629 TYR D 658 LYS D 662 SITE 4 AC3 17 TYR D 668 LYS D 672 TRP D 687 GLU D 689 SITE 5 AC3 17 LYS D 690 SITE 1 AC4 5 HIS D 394 CYS D 451 LYS D 483 CYS D 516 SITE 2 AC4 5 HOH D 905 CRYST1 82.362 107.498 121.097 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012142 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009302 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008258 0.00000