PDB Short entry for 5EEA
HEADER    TRANSCRIPTION                           22-OCT-15   5EEA              
TITLE     STRUCTURE OF HOXB13-DNA(CAA) COMPLEX                                  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-                                                   
COMPND   3 D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*TP*TP*GP*GP*GP*TP*CP*C)-3');       
COMPND   4 CHAIN: D, C, H, K;                                                   
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: DNA (5'-                                                   
COMPND   8 D(P*GP*GP*AP*CP*CP*CP*AP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3');       
COMPND   9 CHAIN: E, F, I, L;                                                   
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: HOMEOBOX PROTEIN HOX-B13;                                  
COMPND  13 CHAIN: B, A, G, J;                                                   
COMPND  14 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE   4 ORGANISM_TAXID: 32630;                                               
SOURCE   5 MOL_ID: 2;                                                           
SOURCE   6 SYNTHETIC: YES;                                                      
SOURCE   7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE   8 ORGANISM_TAXID: 32630;                                               
SOURCE   9 MOL_ID: 3;                                                           
SOURCE  10 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  11 ORGANISM_COMMON: HUMAN;                                              
SOURCE  12 ORGANISM_TAXID: 9606;                                                
SOURCE  13 GENE: HOXB13;                                                        
SOURCE  14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE  15 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE  16 EXPRESSION_SYSTEM_VARIANT: ROSETTA;                                  
SOURCE  17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  18 EXPRESSION_SYSTEM_PLASMID: PETG20A                                   
KEYWDS    TRANSCRIPTION FACTOR, DNA, COMPLEX, TRANSCRIPTION                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    E.MORGUNOVA,Y.YIN,A.JOLMA,A.POPOV,J.TAIPALE                           
REVDAT   4   10-JAN-24 5EEA    1       REMARK                                   
REVDAT   3   30-OCT-19 5EEA    1       REMARK LINK                              
REVDAT   2   15-AUG-18 5EEA    1       JRNL                                     
REVDAT   1   26-OCT-16 5EEA    0                                                
JRNL        AUTH   E.MORGUNOVA,Y.YIN,P.K.DAS,A.JOLMA,F.ZHU,A.POPOV,Y.XU,        
JRNL        AUTH 2 L.NILSSON,J.TAIPALE                                          
JRNL        TITL   TWO DISTINCT DNA SEQUENCES RECOGNIZED BY TRANSCRIPTION       
JRNL        TITL 2 FACTORS REPRESENT ENTHALPY AND ENTROPY OPTIMA.               
JRNL        REF    ELIFE                         V.   7       2018              
JRNL        REFN                   ESSN 2050-084X                               
JRNL        PMID   29638214                                                     
JRNL        DOI    10.7554/ELIFE.32963                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.20 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.9_1692                                      
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 45.95                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 97.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 85430                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.252                           
REMARK   3   R VALUE            (WORKING SET) : 0.251                           
REMARK   3   FREE R VALUE                     : 0.297                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 2.880                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2458                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 45.9551 -  5.7489    0.97     4631   137  0.2095 0.2476        
REMARK   3     2  5.7489 -  4.5644    1.00     4743   139  0.2072 0.2215        
REMARK   3     3  4.5644 -  3.9878    0.99     4731   129  0.2196 0.2435        
REMARK   3     4  3.9878 -  3.6234    0.99     4698   135  0.2217 0.2568        
REMARK   3     5  3.6234 -  3.3637    0.97     4635   126  0.2100 0.2713        
REMARK   3     6  3.3637 -  3.1655    0.96     4562   140  0.2330 0.2758        
REMARK   3     7  3.1655 -  3.0070    0.98     4610   168  0.2625 0.3256        
REMARK   3     8  3.0070 -  2.8761    0.98     4688   140  0.2722 0.3771        
REMARK   3     9  2.8761 -  2.7654    0.99     4679   141  0.3001 0.4258        
REMARK   3    10  2.7654 -  2.6700    0.98     4658   136  0.3008 0.3821        
REMARK   3    11  2.6700 -  2.5865    0.98     4673   135  0.2788 0.3020        
REMARK   3    12  2.5865 -  2.5126    0.99     4710   130  0.2933 0.3366        
REMARK   3    13  2.5126 -  2.4464    0.97     4653   154  0.2971 0.3886        
REMARK   3    14  2.4464 -  2.3867    0.98     4629   132  0.3024 0.3517        
REMARK   3    15  2.3867 -  2.3325    0.98     4664   125  0.3118 0.3160        
REMARK   3    16  2.3325 -  2.2829    0.97     4572   144  0.3444 0.4682        
REMARK   3    17  2.2829 -  2.2372    0.99     4666   160  0.3487 0.3554        
REMARK   3    18  2.2372 -  2.1950    0.78     3770    87  0.3943 0.3641        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.350            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.640           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.011           5451                                  
REMARK   3   ANGLE     :  1.264           7925                                  
REMARK   3   CHIRALITY :  0.076            879                                  
REMARK   3   PLANARITY :  0.007            496                                  
REMARK   3   DIHEDRAL  : 28.466           2320                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5EEA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-OCT-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000214775.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 06-JUL-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8                                  
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID23-1                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.972420                           
REMARK 200  MONOCHROMATOR                  : SI(111) CRYSTAL                    
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : PSI PILATUS 6M                     
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : SCALA                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 44173                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.190                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 46.020                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.5                               
REMARK 200  DATA REDUNDANCY                : 5.600                              
REMARK 200  R MERGE                    (I) : 0.14300                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 5.9000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.31                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 90.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.60                               
REMARK 200  R MERGE FOR SHELL          (I) : 1.13500                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.200                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 5EDN                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 58.80                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 5000, POTASSIUM CHLORIDE,            
REMARK 280  MAGNESIUM CHLORIDE, PEG 400, PH 8, VAPOR DIFFUSION, SITTING DROP,   
REMARK 280  TEMPERATURE 293K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2, 3, 4                                              
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3590 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 9970 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, B                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3700 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 9980 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F, A                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 3                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3640 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 9970 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, I, G                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 4                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3580 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 10010 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L, J                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     VAL B   278                                                      
REMARK 465     LYS B   279                                                      
REMARK 465     LYS A   279                                                      
REMARK 465     VAL J   278                                                      
REMARK 465     LYS J   279                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS G 279    CG   CD   CE   NZ                                   
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   P     DG E     1     O    HOH E   101              0.27            
REMARK 500   N4    DC D    18     O6    DG E     1              0.36            
REMARK 500   N3    DC D    18     N1    DG E     1              1.03            
REMARK 500   C4    DC D    18     O6    DG E     1              1.04            
REMARK 500   N2    DG I     1     O    HOH I   101              1.15            
REMARK 500   N4    DC D    18     C6    DG E     1              1.18            
REMARK 500   OP1   DG E     1     O    HOH E   101              1.25            
REMARK 500   OP2   DG E     1     O    HOH E   101              1.50            
REMARK 500   OG   SER J   224     O    HOH J   301              1.64            
REMARK 500   C4    DC D    18     C6    DG E     1              1.64            
REMARK 500   O    HOH J   324     O    HOH J   332              1.71            
REMARK 500   N3    DC D    18     C6    DG E     1              1.79            
REMARK 500   C2    DG I     1     O    HOH I   101              1.84            
REMARK 500   O5'   DG E     1     O    HOH E   101              1.84            
REMARK 500   C5'   DG E     1     O    HOH E   106              1.94            
REMARK 500   C4    DC D    18     N1    DG E     1              1.97            
REMARK 500   N4    DC H    18     O6    DG I     1              1.97            
REMARK 500   N3    DC D    18     O6    DG E     1              2.07            
REMARK 500   O    HOH K   107     O    HOH J   332              2.07            
REMARK 500   N    GLN J   227     O    HOH J   301              2.08            
REMARK 500   C5    DC D    18     O6    DG E     1              2.11            
REMARK 500   OP2   DA E    11     O    HOH E   102              2.13            
REMARK 500   C2    DC D    18     N1    DG E     1              2.14            
REMARK 500   OP2   DC H    18     O    HOH H   101              2.14            
REMARK 500   N1    DG I     1     O    HOH I   101              2.15            
REMARK 500   OP2   DA L    11     O    HOH L   101              2.15            
REMARK 500   OP2   DA F    11     O    HOH F   101              2.15            
REMARK 500   N2    DG L     1     O    HOH L   102              2.16            
REMARK 500   O2    DC D    18     N2    DG E     1              2.16            
REMARK 500   NH1  ARG B   229     O    HOH B   301              2.17            
REMARK 500   OP2   DA E    12     O    HOH E   103              2.18            
REMARK 500   O    LYS J   243     O    HOH J   302              2.18            
REMARK 500   N4    DC D    18     C5    DG E     1              2.19            
REMARK 500   NE2  GLN J   265     O    HOH J   303              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O4'   DG I     1     O4'   DC K    18     2545     0.71            
REMARK 500   N3    DG I     1     C2'   DC K    18     2545     1.66            
REMARK 500   C1'   DG I     1     C3'   DC K    18     2545     1.72            
REMARK 500   O4'   DG I     1     C4'   DC K    18     2545     1.73            
REMARK 500   C1'   DG I     1     O4'   DC K    18     2545     1.79            
REMARK 500   O4'   DG I     1     C1'   DC K    18     2545     1.89            
REMARK 500   C4'   DG I     1     O4'   DC K    18     2545     2.01            
REMARK 500   C1'   DG I     1     C4'   DC K    18     2545     2.05            
REMARK 500   C8    DG I     1     C6    DC K    18     2545     2.06            
REMARK 500   C1'   DG I     1     C2'   DC K    18     2545     2.15            
REMARK 500   C4    DG I     1     C2'   DC K    18     2545     2.17            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC D  18   O4' -  C1' -  N1  ANGL. DEV. =   4.0 DEGREES          
REMARK 500     DC E  16   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DC F  16   O4' -  C1' -  N1  ANGL. DEV. =   2.6 DEGREES          
REMARK 500     DA F  17   O4' -  C1' -  N9  ANGL. DEV. =   2.0 DEGREES          
REMARK 500     DC H  18   O4' -  C1' -  N1  ANGL. DEV. =   4.0 DEGREES          
REMARK 500     DC I  16   O4' -  C1' -  N1  ANGL. DEV. =   2.6 DEGREES          
REMARK 500     DC K  18   O4' -  C4' -  C3' ANGL. DEV. =  -3.0 DEGREES          
REMARK 500     DC K  18   C1' -  O4' -  C4' ANGL. DEV. =  -6.3 DEGREES          
REMARK 500     DC K  18   O4' -  C1' -  N1  ANGL. DEV. =   3.5 DEGREES          
REMARK 500     DC L  16   O4' -  C1' -  N1  ANGL. DEV. =   2.2 DEGREES          
REMARK 500    ARG B 220   NE  -  CZ  -  NH2 ANGL. DEV. =  -4.5 DEGREES          
REMARK 500    ARG B 246   NE  -  CZ  -  NH1 ANGL. DEV. =   3.3 DEGREES          
REMARK 500    ARG A 220   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.6 DEGREES          
REMARK 500    ARG A 246   NE  -  CZ  -  NH1 ANGL. DEV. =   3.4 DEGREES          
REMARK 500    ARG G 220   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.7 DEGREES          
REMARK 500    ARG G 246   NE  -  CZ  -  NH1 ANGL. DEV. =   3.4 DEGREES          
REMARK 500    ARG J 220   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LYS A 277      110.09   -160.11                                   
REMARK 500    LEU G 275      -82.47    -67.64                                   
REMARK 500    LYS G 277       86.22   -167.78                                   
REMARK 500    LYS J 218      -70.01    -93.00                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 LEU G  275     ALA G  276                   60.21                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH B 350        DISTANCE =  6.39 ANGSTROMS                       
DBREF  5EEA D    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA E    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA C    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA F    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA H    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA I    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA K    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA L    1    18  PDB    5EEA     5EEA             1     18             
DBREF  5EEA B  217   279  UNP    Q92826   HXB13_HUMAN    217    279             
DBREF  5EEA A  217   279  UNP    Q92826   HXB13_HUMAN    217    279             
DBREF  5EEA G  217   279  UNP    Q92826   HXB13_HUMAN    217    279             
DBREF  5EEA J  217   279  UNP    Q92826   HXB13_HUMAN    217    279             
SEQRES   1 D   18   DT  DT  DG  DT  DG  DT  DT  DT  DT  DA  DT  DT  DG          
SEQRES   2 D   18   DG  DG  DT  DC  DC                                          
SEQRES   1 E   18   DG  DG  DA  DC  DC  DC  DA  DA  DT  DA  DA  DA  DA          
SEQRES   2 E   18   DC  DA  DC  DA  DA                                          
SEQRES   1 C   18   DT  DT  DG  DT  DG  DT  DT  DT  DT  DA  DT  DT  DG          
SEQRES   2 C   18   DG  DG  DT  DC  DC                                          
SEQRES   1 F   18   DG  DG  DA  DC  DC  DC  DA  DA  DT  DA  DA  DA  DA          
SEQRES   2 F   18   DC  DA  DC  DA  DA                                          
SEQRES   1 H   18   DT  DT  DG  DT  DG  DT  DT  DT  DT  DA  DT  DT  DG          
SEQRES   2 H   18   DG  DG  DT  DC  DC                                          
SEQRES   1 I   18   DG  DG  DA  DC  DC  DC  DA  DA  DT  DA  DA  DA  DA          
SEQRES   2 I   18   DC  DA  DC  DA  DA                                          
SEQRES   1 K   18   DT  DT  DG  DT  DG  DT  DT  DT  DT  DA  DT  DT  DG          
SEQRES   2 K   18   DG  DG  DT  DC  DC                                          
SEQRES   1 L   18   DG  DG  DA  DC  DC  DC  DA  DA  DT  DA  DA  DA  DA          
SEQRES   2 L   18   DC  DA  DC  DA  DA                                          
SEQRES   1 B   63  ARG LYS LYS ARG ILE PRO TYR SER LYS GLY GLN LEU ARG          
SEQRES   2 B   63  GLU LEU GLU ARG GLU TYR ALA ALA ASN LYS PHE ILE THR          
SEQRES   3 B   63  LYS ASP LYS ARG ARG LYS ILE SER ALA ALA THR SER LEU          
SEQRES   4 B   63  SER GLU ARG GLN ILE THR ILE TRP PHE GLN ASN ARG ARG          
SEQRES   5 B   63  VAL LYS GLU LYS LYS VAL LEU ALA LYS VAL LYS                  
SEQRES   1 A   63  ARG LYS LYS ARG ILE PRO TYR SER LYS GLY GLN LEU ARG          
SEQRES   2 A   63  GLU LEU GLU ARG GLU TYR ALA ALA ASN LYS PHE ILE THR          
SEQRES   3 A   63  LYS ASP LYS ARG ARG LYS ILE SER ALA ALA THR SER LEU          
SEQRES   4 A   63  SER GLU ARG GLN ILE THR ILE TRP PHE GLN ASN ARG ARG          
SEQRES   5 A   63  VAL LYS GLU LYS LYS VAL LEU ALA LYS VAL LYS                  
SEQRES   1 G   63  ARG LYS LYS ARG ILE PRO TYR SER LYS GLY GLN LEU ARG          
SEQRES   2 G   63  GLU LEU GLU ARG GLU TYR ALA ALA ASN LYS PHE ILE THR          
SEQRES   3 G   63  LYS ASP LYS ARG ARG LYS ILE SER ALA ALA THR SER LEU          
SEQRES   4 G   63  SER GLU ARG GLN ILE THR ILE TRP PHE GLN ASN ARG ARG          
SEQRES   5 G   63  VAL LYS GLU LYS LYS VAL LEU ALA LYS VAL LYS                  
SEQRES   1 J   63  ARG LYS LYS ARG ILE PRO TYR SER LYS GLY GLN LEU ARG          
SEQRES   2 J   63  GLU LEU GLU ARG GLU TYR ALA ALA ASN LYS PHE ILE THR          
SEQRES   3 J   63  LYS ASP LYS ARG ARG LYS ILE SER ALA ALA THR SER LEU          
SEQRES   4 J   63  SER GLU ARG GLN ILE THR ILE TRP PHE GLN ASN ARG ARG          
SEQRES   5 J   63  VAL LYS GLU LYS LYS VAL LEU ALA LYS VAL LYS                  
FORMUL  13  HOH   *518(H2 O)                                                    
HELIX    1 AA1 SER B  224  ASN B  238  1                                  15    
HELIX    2 AA2 THR B  242  SER B  254  1                                  13    
HELIX    3 AA3 SER B  256  ALA B  276  1                                  21    
HELIX    4 AA4 SER A  224  ASN A  238  1                                  15    
HELIX    5 AA5 THR A  242  SER A  254  1                                  13    
HELIX    6 AA6 SER A  256  ALA A  276  1                                  21    
HELIX    7 AA7 SER G  224  ASN G  238  1                                  15    
HELIX    8 AA8 THR G  242  SER G  254  1                                  13    
HELIX    9 AA9 SER G  256  LEU G  275  1                                  20    
HELIX   10 AB1 SER J  224  ASN J  238  1                                  15    
HELIX   11 AB2 THR J  242  SER J  254  1                                  13    
HELIX   12 AB3 SER J  256  LEU J  275  1                                  20    
CISPEP   1 ARG A  217    LYS A  218          0         5.41                     
CISPEP   2 LYS A  218    LYS A  219          0        12.53                     
CISPEP   3 ARG G  217    LYS G  218          0        -8.71                     
CISPEP   4 LYS G  218    LYS G  219          0        21.00                     
CISPEP   5 LYS G  277    VAL G  278          0       -20.09                     
CISPEP   6 ARG J  217    LYS J  218          0         9.44                     
CISPEP   7 LYS J  218    LYS J  219          0        10.42                     
CRYST1   77.356   57.918  101.278  90.00 101.57  90.00 P 1 2 1       8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.012927  0.000000  0.002647        0.00000                         
SCALE2      0.000000  0.017266  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.010079        0.00000