PDB Short entry for 5EP2 HEADER TRANSCRIPTION/TRANSCRIPTION INHIBITOR 11-NOV-15 5EP2 TITLE QUORUM-SENSING SIGNAL INTEGRATOR LUXO - CATALYTIC DOMAIN IN COMPLEX TITLE 2 WITH AZAU INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE REPRESSOR PROTEIN LUXO; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: AAA+ CATALYTIC DOMAIN (UNP RESIDUES 141-387); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHOTOBACTERIUM ANGUSTUM; SOURCE 3 ORGANISM_TAXID: 661; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS QUORUM SENSING, AAA+ PROTEIN, CATALYTIC DOMAIN, ATPASE, INHIBITOR, KEYWDS 2 TRANSCRIPTION-TRANSCRIPTION INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.SHAH,H.B.SELCUK,P.D.JEFFREY,F.M.HUGHSON REVDAT 5 06-MAR-24 5EP2 1 REMARK REVDAT 4 11-DEC-19 5EP2 1 REMARK REVDAT 3 27-SEP-17 5EP2 1 REMARK REVDAT 2 08-JUN-16 5EP2 1 JRNL REVDAT 1 20-APR-16 5EP2 0 JRNL AUTH H.BOYACI,T.SHAH,A.HURLEY,B.KOKONA,Z.LI,C.VENTOCILLA, JRNL AUTH 2 P.D.JEFFREY,M.F.SEMMELHACK,R.FAIRMAN,B.L.BASSLER,F.M.HUGHSON JRNL TITL STRUCTURE, REGULATION, AND INHIBITION OF THE QUORUM-SENSING JRNL TITL 2 SIGNAL INTEGRATOR LUXO. JRNL REF PLOS BIOL. V. 14 02464 2016 JRNL REFN ESSN 1545-7885 JRNL PMID 27219477 JRNL DOI 10.1371/JOURNAL.PBIO.1002464 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX PHENIX.REFINE: 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 51066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2592 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.9403 - 3.7890 0.97 2543 137 0.1570 0.1508 REMARK 3 2 3.7890 - 3.0080 1.00 2590 122 0.1592 0.1953 REMARK 3 3 3.0080 - 2.6279 1.00 2575 123 0.1640 0.1893 REMARK 3 4 2.6279 - 2.3877 1.00 2558 145 0.1561 0.2277 REMARK 3 5 2.3877 - 2.2166 1.00 2566 156 0.1530 0.1603 REMARK 3 6 2.2166 - 2.0859 1.00 2563 130 0.1497 0.1621 REMARK 3 7 2.0859 - 1.9814 1.00 2575 127 0.1556 0.1753 REMARK 3 8 1.9814 - 1.8952 1.00 2566 130 0.1499 0.1656 REMARK 3 9 1.8952 - 1.8222 1.00 2556 130 0.1571 0.2039 REMARK 3 10 1.8222 - 1.7594 1.00 2581 120 0.1557 0.1825 REMARK 3 11 1.7594 - 1.7044 1.00 2542 135 0.1582 0.2167 REMARK 3 12 1.7044 - 1.6556 1.00 2555 141 0.1576 0.1926 REMARK 3 13 1.6556 - 1.6121 1.00 2554 147 0.1663 0.1891 REMARK 3 14 1.6121 - 1.5727 1.00 2569 130 0.1680 0.2396 REMARK 3 15 1.5727 - 1.5370 1.00 2511 138 0.1653 0.1940 REMARK 3 16 1.5370 - 1.5043 1.00 2571 156 0.1828 0.2421 REMARK 3 17 1.5043 - 1.4742 1.00 2497 155 0.1901 0.2136 REMARK 3 18 1.4742 - 1.4463 1.00 2573 144 0.2061 0.2397 REMARK 3 19 1.4463 - 1.4205 0.96 2429 126 0.2321 0.2583 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2102 REMARK 3 ANGLE : 1.580 2860 REMARK 3 CHIRALITY : 0.099 317 REMARK 3 PLANARITY : 0.008 377 REMARK 3 DIHEDRAL : 12.994 804 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 141:201) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1350 64.7628 33.4885 REMARK 3 T TENSOR REMARK 3 T11: 0.1826 T22: 0.1130 REMARK 3 T33: 0.1487 T12: 0.0132 REMARK 3 T13: -0.0041 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.5287 L22: 1.0069 REMARK 3 L33: 2.3590 L12: 0.0856 REMARK 3 L13: 0.2177 L23: -0.6644 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.0301 S13: -0.0179 REMARK 3 S21: -0.0200 S22: 0.0238 S23: 0.0446 REMARK 3 S31: 0.0188 S32: -0.0627 S33: 0.0009 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 202:220) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5529 57.9140 17.4627 REMARK 3 T TENSOR REMARK 3 T11: 0.3656 T22: 0.3708 REMARK 3 T33: 0.3095 T12: 0.1883 REMARK 3 T13: 0.0291 T23: -0.0472 REMARK 3 L TENSOR REMARK 3 L11: 3.9501 L22: 3.0201 REMARK 3 L33: 3.7467 L12: 0.2040 REMARK 3 L13: -0.6570 L23: -0.6574 REMARK 3 S TENSOR REMARK 3 S11: 0.0218 S12: 0.4754 S13: -0.7667 REMARK 3 S21: -0.3463 S22: -0.0147 S23: -0.4902 REMARK 3 S31: 0.8896 S32: 0.8505 S33: -0.0231 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 221:227) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7143 53.3688 11.7814 REMARK 3 T TENSOR REMARK 3 T11: 0.7273 T22: 0.4960 REMARK 3 T33: 0.6770 T12: 0.1704 REMARK 3 T13: 0.0729 T23: -0.2912 REMARK 3 L TENSOR REMARK 3 L11: 4.2581 L22: 7.0165 REMARK 3 L33: 7.3812 L12: -1.5916 REMARK 3 L13: -0.8947 L23: 2.2010 REMARK 3 S TENSOR REMARK 3 S11: -0.2140 S12: 0.2871 S13: -0.7261 REMARK 3 S21: -0.3290 S22: 0.1443 S23: -0.5486 REMARK 3 S31: 0.8663 S32: 0.7727 S33: 0.0906 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 228:245) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2738 63.1543 23.4021 REMARK 3 T TENSOR REMARK 3 T11: 0.2205 T22: 0.1496 REMARK 3 T33: 0.1785 T12: 0.0507 REMARK 3 T13: -0.0028 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 3.2404 L22: 1.8307 REMARK 3 L33: 2.4395 L12: 0.1358 REMARK 3 L13: 0.7250 L23: 0.4110 REMARK 3 S TENSOR REMARK 3 S11: 0.1935 S12: 0.0045 S13: 0.0068 REMARK 3 S21: -0.0780 S22: -0.0868 S23: -0.2739 REMARK 3 S31: 0.4371 S32: 0.2466 S33: -0.1241 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 246:269) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7427 69.8224 17.7769 REMARK 3 T TENSOR REMARK 3 T11: 0.2101 T22: 0.2650 REMARK 3 T33: 0.2036 T12: 0.0192 REMARK 3 T13: 0.0089 T23: 0.0507 REMARK 3 L TENSOR REMARK 3 L11: 3.4128 L22: 2.2012 REMARK 3 L33: 3.9088 L12: -0.0330 REMARK 3 L13: 1.5954 L23: 0.8789 REMARK 3 S TENSOR REMARK 3 S11: -0.1283 S12: 0.4868 S13: 0.2895 REMARK 3 S21: -0.2110 S22: -0.0651 S23: -0.3093 REMARK 3 S31: -0.0509 S32: 0.7065 S33: 0.1589 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 270:282) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7061 68.3453 19.6221 REMARK 3 T TENSOR REMARK 3 T11: 0.1779 T22: 0.1562 REMARK 3 T33: 0.1629 T12: 0.0295 REMARK 3 T13: -0.0011 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.9464 L22: 1.9027 REMARK 3 L33: 7.1765 L12: 0.2444 REMARK 3 L13: 0.5476 L23: -0.6124 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: 0.1718 S13: 0.0219 REMARK 3 S21: -0.0434 S22: -0.1045 S23: -0.1695 REMARK 3 S31: -0.0987 S32: 0.5526 S33: 0.1182 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 283:292) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9063 71.8290 38.8634 REMARK 3 T TENSOR REMARK 3 T11: 0.5618 T22: 0.4062 REMARK 3 T33: 0.3151 T12: -0.0107 REMARK 3 T13: -0.1277 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 4.9397 L22: 5.7067 REMARK 3 L33: 4.5808 L12: 5.2689 REMARK 3 L13: -4.6583 L23: -4.9966 REMARK 3 S TENSOR REMARK 3 S11: 0.4748 S12: -0.8848 S13: -0.2614 REMARK 3 S21: 1.2943 S22: -0.2664 S23: -0.3355 REMARK 3 S31: 0.1105 S32: 0.6312 S33: -0.1680 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 293:305) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3055 75.9560 30.6419 REMARK 3 T TENSOR REMARK 3 T11: 0.1728 T22: 0.1766 REMARK 3 T33: 0.2094 T12: -0.0020 REMARK 3 T13: -0.0032 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 6.5327 L22: 4.0198 REMARK 3 L33: 4.4174 L12: -1.3751 REMARK 3 L13: 0.2949 L23: 0.1039 REMARK 3 S TENSOR REMARK 3 S11: -0.0478 S12: -0.0388 S13: 0.0185 REMARK 3 S21: 0.0980 S22: 0.0398 S23: -0.3668 REMARK 3 S31: -0.0306 S32: 0.5038 S33: 0.0045 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 306:378) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9243 49.2102 48.4187 REMARK 3 T TENSOR REMARK 3 T11: 0.1289 T22: 0.1390 REMARK 3 T33: 0.1465 T12: 0.0149 REMARK 3 T13: 0.0144 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.6281 L22: 1.9620 REMARK 3 L33: 0.7839 L12: 0.0217 REMARK 3 L13: 0.0716 L23: -0.7538 REMARK 3 S TENSOR REMARK 3 S11: 0.0205 S12: -0.0522 S13: -0.1401 REMARK 3 S21: 0.0764 S22: -0.0271 S23: -0.0012 REMARK 3 S31: -0.0139 S32: -0.0677 S33: 0.0070 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 379:392) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4646 46.0453 58.3357 REMARK 3 T TENSOR REMARK 3 T11: 0.3503 T22: 0.2986 REMARK 3 T33: 0.2887 T12: -0.0464 REMARK 3 T13: -0.0618 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 5.9521 L22: 7.1443 REMARK 3 L33: 6.5931 L12: 1.4987 REMARK 3 L13: 0.3021 L23: 2.9171 REMARK 3 S TENSOR REMARK 3 S11: 0.2383 S12: -0.5557 S13: 0.1441 REMARK 3 S21: 0.5785 S22: 0.0005 S23: -0.9213 REMARK 3 S31: -0.7070 S32: 0.6463 S33: -0.1619 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EP2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215292. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51124 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.40 REMARK 200 R MERGE FOR SHELL (I) : 0.73100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS BUFFER PH 8.0, 4 M REMARK 280 AMMONIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.41833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.83667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.12750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 68.54583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.70917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 140 REMARK 465 HIS A 393 REMARK 465 HIS A 394 REMARK 465 HIS A 395 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 223 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 319 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 222 77.30 -69.89 REMARK 500 SER A 338 44.71 -145.44 REMARK 500 ASN A 358 -136.07 51.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZU A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EP0 RELATED DB: PDB REMARK 900 RELATED ID: 5EP1 RELATED DB: PDB REMARK 900 RELATED ID: 5EP3 RELATED DB: PDB REMARK 900 RELATED ID: 5EP4 RELATED DB: PDB DBREF 5EP2 A 141 387 UNP Q1ZS18 Q1ZS18_PHOAS 141 387 SEQADV 5EP2 MET A 140 UNP Q1ZS18 INITIATING METHIONINE SEQADV 5EP2 LEU A 388 UNP Q1ZS18 EXPRESSION TAG SEQADV 5EP2 GLU A 389 UNP Q1ZS18 EXPRESSION TAG SEQADV 5EP2 HIS A 390 UNP Q1ZS18 EXPRESSION TAG SEQADV 5EP2 HIS A 391 UNP Q1ZS18 EXPRESSION TAG SEQADV 5EP2 HIS A 392 UNP Q1ZS18 EXPRESSION TAG SEQADV 5EP2 HIS A 393 UNP Q1ZS18 EXPRESSION TAG SEQADV 5EP2 HIS A 394 UNP Q1ZS18 EXPRESSION TAG SEQADV 5EP2 HIS A 395 UNP Q1ZS18 EXPRESSION TAG SEQRES 1 A 256 MET GLY PHE ILE GLY ASN SER LEU PRO MET GLN ALA VAL SEQRES 2 A 256 TYR ARG VAL ILE GLU SER ALA ALA SER SER LYS ALA THR SEQRES 3 A 256 VAL PHE ILE THR GLY GLU SER GLY THR GLY LYS GLU VAL SEQRES 4 A 256 CYS ALA GLU ALA ILE HIS ALA ALA SER PRO ARG HIS ASP SEQRES 5 A 256 LYS PRO PHE ILE ALA LEU ASN CYS ALA ALA ILE PRO LYS SEQRES 6 A 256 ASP LEU ILE GLU SER GLU LEU PHE GLY HIS VAL LYS GLY SEQRES 7 A 256 ALA PHE THR GLY ALA SER THR GLU ARG GLN GLY ALA VAL SEQRES 8 A 256 GLU MET ALA HIS ASN GLY THR LEU MET LEU ASP GLU LEU SEQRES 9 A 256 CYS GLU MET ASP LEU ASP LEU GLN SER LYS LEU LEU ARG SEQRES 10 A 256 PHE ILE GLN THR GLY THR TYR GLN LYS VAL GLY SER SER SEQRES 11 A 256 LYS MET SER SER VAL ASP VAL ARG PHE VAL CYS ALA THR SEQRES 12 A 256 ASN ARG ASN PRO TRP GLU GLU VAL GLN GLU GLY ARG PHE SEQRES 13 A 256 ARG GLU ASP LEU TYR TYR ARG LEU HIS VAL ILE PRO ILE SEQRES 14 A 256 SER LEU PRO PRO LEU ARG GLU ARG GLY GLY ASP ILE ILE SEQRES 15 A 256 GLU ILE ALA HIS ALA LEU LEU GLY LEU MET SER LEU GLU SEQRES 16 A 256 GLU GLY LYS SER PHE SER ARG PHE SER GLU PRO VAL LEU SEQRES 17 A 256 ARG LEU PHE GLU SER TYR SER TRP PRO GLY ASN VAL ARG SEQRES 18 A 256 GLU LEU GLN ASN VAL ILE ARG ASN ILE VAL VAL LEU ASN SEQRES 19 A 256 THR ASP ASP GLU VAL LYS LEU GLU MET VAL PRO PRO PRO SEQRES 20 A 256 ILE LEU GLU HIS HIS HIS HIS HIS HIS HET AZU A 401 18 HET ACT A 402 4 HET ACT A 403 4 HET ACT A 404 4 HETNAM AZU 2,2-DIMETHYLPROPYL 2-[[3,5-BIS(OXIDANYLIDENE)-2~{H}-1, HETNAM 2 AZU 2,4-TRIAZIN-6-YL]SULFANYL]ETHANOATE HETNAM ACT ACETATE ION FORMUL 2 AZU C10 H15 N3 O4 S FORMUL 3 ACT 3(C2 H3 O2 1-) FORMUL 6 HOH *237(H2 O) HELIX 1 AA1 SER A 146 SER A 161 1 16 HELIX 2 AA2 GLY A 175 SER A 187 1 13 HELIX 3 AA3 PRO A 203 ASP A 205 5 3 HELIX 4 AA4 LEU A 206 PHE A 212 1 7 HELIX 5 AA5 GLY A 228 ALA A 233 1 6 HELIX 6 AA6 LEU A 243 MET A 246 5 4 HELIX 7 AA7 ASP A 247 GLY A 261 1 15 HELIX 8 AA8 ASN A 285 GLU A 292 1 8 HELIX 9 AA9 ARG A 296 HIS A 304 1 9 HELIX 10 AB1 PRO A 312 GLY A 317 5 6 HELIX 11 AB2 GLY A 318 GLY A 336 1 19 HELIX 12 AB3 SER A 343 TYR A 353 1 11 HELIX 13 AB4 GLY A 357 ASN A 373 1 17 HELIX 14 AB5 LYS A 379 VAL A 383 5 5 HELIX 15 AB6 PRO A 386 HIS A 392 1 7 SHEET 1 AA1 5 PHE A 194 ASN A 198 0 SHEET 2 AA1 5 THR A 237 ASP A 241 1 O MET A 239 N LEU A 197 SHEET 3 AA1 5 ARG A 277 THR A 282 1 O ARG A 277 N LEU A 238 SHEET 4 AA1 5 VAL A 166 THR A 169 1 N VAL A 166 O CYS A 280 SHEET 5 AA1 5 ILE A 306 SER A 309 1 O ILE A 308 N THR A 169 SHEET 1 AA2 2 GLY A 213 HIS A 214 0 SHEET 2 AA2 2 ARG A 226 GLN A 227 -1 O ARG A 226 N HIS A 214 SHEET 1 AA3 2 THR A 262 TYR A 263 0 SHEET 2 AA3 2 SER A 272 SER A 273 -1 O SER A 272 N TYR A 263 SHEET 1 AA4 2 ARG A 341 PHE A 342 0 SHEET 2 AA4 2 GLU A 377 VAL A 378 1 O VAL A 378 N ARG A 341 CISPEP 1 PRO A 385 PRO A 386 0 0.12 SITE 1 AC1 10 PHE A 142 ILE A 143 GLY A 175 VAL A 178 SITE 2 AC1 10 ARG A 316 ILE A 323 LEU A 327 VAL A 359 SITE 3 AC1 10 GLN A 363 HOH A 549 SITE 1 AC2 6 LYS A 163 ALA A 164 ARG A 348 ARG A 367 SITE 2 AC2 6 HOH A 538 HOH A 555 SITE 1 AC3 3 ILE A 258 ARG A 302 HOH A 511 SITE 1 AC4 5 SER A 343 LYS A 379 LEU A 380 HOH A 530 SITE 2 AC4 5 HOH A 558 CRYST1 76.403 76.403 82.255 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013088 0.007557 0.000000 0.00000 SCALE2 0.000000 0.015113 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012157 0.00000