PDB Short entry for 5EWF
HEADER    TRANSFERASE/DNA                         20-NOV-15   5EWF              
TITLE     TERNARY COMPLEX OF HUMAN DNA POLYMERASE ETA INSERTING RCTP OPPOSITE AN
TITLE    2 8-OXODEOXYGUANOSINE LESION                                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE ETA;                                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 1-432;                                        
COMPND   5 SYNONYM: RAD30 HOMOLOG A,XERODERMA PIGMENTOSUM VARIANT TYPE PROTEIN; 
COMPND   6 EC: 2.7.7.7;                                                         
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: DNA (5'-D(*CP*AP*TP*(8OG)P*AP*TP*GP*AP*CP*GP*CP*T)-3');    
COMPND  10 CHAIN: T;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3');                    
COMPND  14 CHAIN: P;                                                            
COMPND  15 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: POLH, RAD30, RAD30A, XPV;                                      
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG';        
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 866768;                                     
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 SYNTHETIC: YES;                                                      
SOURCE  10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  11 ORGANISM_TAXID: 32630;                                               
SOURCE  12 MOL_ID: 3;                                                           
SOURCE  13 SYNTHETIC: YES;                                                      
SOURCE  14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  15 ORGANISM_TAXID: 32630                                                
KEYWDS    POLYMERASE-DNA COMPLEX, RIBONUCLEOTIDE INCORPORATION, TRANSFERASE-DNA 
KEYWDS   2 COMPLEX                                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.SU,M.EGLI,F.P.GUENGERICH                                            
REVDAT   5   04-DEC-19 5EWF    1       REMARK                                   
REVDAT   4   13-SEP-17 5EWF    1       JRNL   REMARK                            
REVDAT   3   02-MAR-16 5EWF    1       JRNL                                     
REVDAT   2   20-JAN-16 5EWF    1       JRNL                                     
REVDAT   1   13-JAN-16 5EWF    0                                                
JRNL        AUTH   Y.SU,M.EGLI,F.P.GUENGERICH                                   
JRNL        TITL   MECHANISM OF RIBONUCLEOTIDE INCORPORATION BY HUMAN DNA       
JRNL        TITL 2 POLYMERASE ETA.                                              
JRNL        REF    J.BIOL.CHEM.                  V. 291  3747 2016              
JRNL        REFN                   ESSN 1083-351X                               
JRNL        PMID   26740629                                                     
JRNL        DOI    10.1074/JBC.M115.706226                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.78 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.10_2155                                     
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 42.92                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.120                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 43080                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.181                           
REMARK   3   R VALUE            (WORKING SET) : 0.180                           
REMARK   3   FREE R VALUE                     : 0.216                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.720                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2043                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 42.9344 -  5.4706    0.97     2741   129  0.1871 0.2005        
REMARK   3     2  5.4706 -  4.3435    0.98     2751   136  0.1562 0.1427        
REMARK   3     3  4.3435 -  3.7948    0.98     2777   116  0.1408 0.1484        
REMARK   3     4  3.7948 -  3.4480    0.99     2753   158  0.1484 0.2041        
REMARK   3     5  3.4480 -  3.2010    0.99     2743   140  0.1573 0.1934        
REMARK   3     6  3.2010 -  3.0123    0.99     2795   148  0.1793 0.2126        
REMARK   3     7  3.0123 -  2.8615    0.99     2785   118  0.1890 0.3072        
REMARK   3     8  2.8615 -  2.7369    0.99     2811   128  0.1831 0.2044        
REMARK   3     9  2.7369 -  2.6316    0.99     2803   146  0.1829 0.2609        
REMARK   3    10  2.6316 -  2.5408    0.99     2776   108  0.1848 0.2179        
REMARK   3    11  2.5408 -  2.4614    0.99     2830   106  0.1796 0.2158        
REMARK   3    12  2.4614 -  2.3910    1.00     2801   130  0.1847 0.2284        
REMARK   3    13  2.3910 -  2.3281    1.00     2811   120  0.1731 0.2822        
REMARK   3    14  2.3281 -  2.2713    1.00     2823   140  0.1783 0.2219        
REMARK   3    15  2.2713 -  2.2196    0.99     2770   142  0.1873 0.2240        
REMARK   3    16  2.2196 -  2.1724    1.00     2785   166  0.1850 0.2185        
REMARK   3    17  2.1724 -  2.1289    1.00     2808   122  0.1883 0.2555        
REMARK   3    18  2.1289 -  2.0888    1.00     2805   152  0.1819 0.2422        
REMARK   3    19  2.0888 -  2.0515    1.00     2775   162  0.1861 0.2260        
REMARK   3    20  2.0515 -  2.0167    1.00     2791   140  0.1965 0.2370        
REMARK   3    21  2.0167 -  1.9842    1.00     2767   158  0.2015 0.2393        
REMARK   3    22  1.9842 -  1.9536    1.00     2791   146  0.2056 0.2360        
REMARK   3    23  1.9536 -  1.9249    0.99     2791   156  0.2231 0.3004        
REMARK   3    24  1.9249 -  1.8978    1.00     2798   140  0.2257 0.2863        
REMARK   3    25  1.8978 -  1.8721    0.99     2790   146  0.2367 0.2585        
REMARK   3    26  1.8721 -  1.8478    1.00     2713   152  0.2523 0.2975        
REMARK   3    27  1.8478 -  1.8247    0.99     2856   128  0.2606 0.3279        
REMARK   3    28  1.8247 -  1.8028    0.99     2796   108  0.2672 0.3042        
REMARK   3    29  1.8028 -  1.7818    0.98     2715   160  0.2739 0.3040        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.190            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.500           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.008           3921                                  
REMARK   3   ANGLE     :  1.146           5435                                  
REMARK   3   CHIRALITY :  0.057            617                                  
REMARK   3   PLANARITY :  0.006            621                                  
REMARK   3   DIHEDRAL  : 17.062           2328                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5EWF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-NOV-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000215582.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 31-OCT-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 21-ID-F                            
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97872                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 225 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 43104                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.780                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.2                               
REMARK 200  DATA REDUNDANCY                : 8.800                              
REMARK 200  R MERGE                    (I) : 0.11500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 18.5000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.81                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.1                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 7.80                               
REMARK 200  R MERGE FOR SHELL          (I) : 1.22900                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 4O3P                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 41.68                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: NAMES (PH 6.0), POLYETHYLENE GLYCOL      
REMARK 280  MONOMETHYL ETHER 2000, AND CALCIUM CHLORIDE, VAPOR DIFFUSION,       
REMARK 280  HANGING DROP, TEMPERATURE 291K                                      
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+5/6                                            
REMARK 290       6555   X-Y,X,Z+1/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       27.12800            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       54.25600            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       40.69200            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       67.82000            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       13.56400            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 6000 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 20550 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     PRO A   154                                                      
REMARK 465     THR A   155                                                      
REMARK 465     THR A   156                                                      
REMARK 465     ALA A   157                                                      
REMARK 465     GLU A   158                                                      
REMARK 465     GLU A   159                                                      
REMARK 465     THR A   160                                                      
REMARK 465     GLY A   410                                                      
REMARK 465     ILE A   411                                                      
REMARK 465     GLN A   412                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     MET A   1    CG   SD   CE                                        
REMARK 470     LYS A  40    CG   CD   CE   NZ                                   
REMARK 470     VAL A 108    CG1  CG2                                            
REMARK 470     GLN A 126    CD   OE1  NE2                                       
REMARK 470     GLU A 127    CG   CD   OE1  OE2                                  
REMARK 470     GLN A 130    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 131    CG   CD   CE   NZ                                   
REMARK 470     LEU A 132    CG   CD1  CD2                                       
REMARK 470     GLN A 133    CG   CD   OE1  NE2                                  
REMARK 470     GLN A 135    CG   CD   OE1  NE2                                  
REMARK 470     VAL A 161    CB   CG1  CG2                                       
REMARK 470     GLN A 162    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 168    CE   NZ                                             
REMARK 470     GLN A 169    CG   CD   OE1  NE2                                  
REMARK 470     GLN A 179    CG   CD   OE1  NE2                                  
REMARK 470     ASP A 181    CG   OD1  OD2                                       
REMARK 470     GLU A 268    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 293    CD   CE   NZ                                        
REMARK 470     LYS A 328    CG   CD   CE   NZ                                   
REMARK 470     ARG A 334    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 350    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 354    CG   CD   CE   NZ                                   
REMARK 470     LYS A 376    CG   CD   CE   NZ                                   
REMARK 470     LEU A 378    CG   CD1  CD2                                       
REMARK 470     ARG A 389    CD   NE   CZ   NH1  NH2                             
REMARK 470     SER A 416    OG                                                  
REMARK 470     LYS A 428    CG   CD   CE   NZ                                   
REMARK 470      DC T   1    O5'  C5'  C4'  O4'  C3'  C2'  C1'                   
REMARK 470      DC T   1    N1   C2   O2   N3   C4   N4   C5                    
REMARK 470      DC T   1    C6                                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DT T   3   O4' -  C1' -  N1  ANGL. DEV. =   2.3 DEGREES          
REMARK 500     DG T   7   O4' -  C1' -  N9  ANGL. DEV. =   2.5 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    CYS A  16       67.70     19.37                                   
REMARK 500    TYR A  39     -174.30     65.87                                   
REMARK 500    LYS A  40      -34.64   -162.78                                   
REMARK 500    SER A  62      -13.43     80.30                                   
REMARK 500    GLN A 133      -85.26    -42.64                                   
REMARK 500    SER A 217     -156.66   -155.91                                   
REMARK 500    SER A 257       -6.93     93.07                                   
REMARK 500    THR A 408       45.36    -88.28                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 502  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A  13   OD1                                                    
REMARK 620 2 MET A  14   O    85.3                                              
REMARK 620 3 ASP A 115   OD2  94.7  87.8                                        
REMARK 620 4 CTP T 101   O1G  98.0  92.6 167.3                                  
REMARK 620 5 CTP T 101   O1A 101.7 171.9  95.5  82.5                            
REMARK 620 6 CTP T 101   O1B 175.7  91.1  87.4  79.9  81.7                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 502                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CTP T 101                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5EWE   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5EWG   RELATED DB: PDB                                   
DBREF  5EWF A    1   432  UNP    Q9Y253   POLH_HUMAN       1    432             
DBREF  5EWF T    1    12  PDB    5EWF     5EWF             1     12             
DBREF  5EWF P    1     8  PDB    5EWF     5EWF             1      8             
SEQADV 5EWF GLY A   -2  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 5EWF PRO A   -1  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 5EWF HIS A    0  UNP  Q9Y253              EXPRESSION TAG                 
SEQRES   1 A  435  GLY PRO HIS MET ALA THR GLY GLN ASP ARG VAL VAL ALA          
SEQRES   2 A  435  LEU VAL ASP MET ASP CYS PHE PHE VAL GLN VAL GLU GLN          
SEQRES   3 A  435  ARG GLN ASN PRO HIS LEU ARG ASN LYS PRO CYS ALA VAL          
SEQRES   4 A  435  VAL GLN TYR LYS SER TRP LYS GLY GLY GLY ILE ILE ALA          
SEQRES   5 A  435  VAL SER TYR GLU ALA ARG ALA PHE GLY VAL THR ARG SER          
SEQRES   6 A  435  MET TRP ALA ASP ASP ALA LYS LYS LEU CYS PRO ASP LEU          
SEQRES   7 A  435  LEU LEU ALA GLN VAL ARG GLU SER ARG GLY LYS ALA ASN          
SEQRES   8 A  435  LEU THR LYS TYR ARG GLU ALA SER VAL GLU VAL MET GLU          
SEQRES   9 A  435  ILE MET SER ARG PHE ALA VAL ILE GLU ARG ALA SER ILE          
SEQRES  10 A  435  ASP GLU ALA TYR VAL ASP LEU THR SER ALA VAL GLN GLU          
SEQRES  11 A  435  ARG LEU GLN LYS LEU GLN GLY GLN PRO ILE SER ALA ASP          
SEQRES  12 A  435  LEU LEU PRO SER THR TYR ILE GLU GLY LEU PRO GLN GLY          
SEQRES  13 A  435  PRO THR THR ALA GLU GLU THR VAL GLN LYS GLU GLY MET          
SEQRES  14 A  435  ARG LYS GLN GLY LEU PHE GLN TRP LEU ASP SER LEU GLN          
SEQRES  15 A  435  ILE ASP ASN LEU THR SER PRO ASP LEU GLN LEU THR VAL          
SEQRES  16 A  435  GLY ALA VAL ILE VAL GLU GLU MET ARG ALA ALA ILE GLU          
SEQRES  17 A  435  ARG GLU THR GLY PHE GLN CYS SER ALA GLY ILE SER HIS          
SEQRES  18 A  435  ASN LYS VAL LEU ALA LYS LEU ALA CYS GLY LEU ASN LYS          
SEQRES  19 A  435  PRO ASN ARG GLN THR LEU VAL SER HIS GLY SER VAL PRO          
SEQRES  20 A  435  GLN LEU PHE SER GLN MET PRO ILE ARG LYS ILE ARG SER          
SEQRES  21 A  435  LEU GLY GLY LYS LEU GLY ALA SER VAL ILE GLU ILE LEU          
SEQRES  22 A  435  GLY ILE GLU TYR MET GLY GLU LEU THR GLN PHE THR GLU          
SEQRES  23 A  435  SER GLN LEU GLN SER HIS PHE GLY GLU LYS ASN GLY SER          
SEQRES  24 A  435  TRP LEU TYR ALA MET CYS ARG GLY ILE GLU HIS ASP PRO          
SEQRES  25 A  435  VAL LYS PRO ARG GLN LEU PRO LYS THR ILE GLY CYS SER          
SEQRES  26 A  435  LYS ASN PHE PRO GLY LYS THR ALA LEU ALA THR ARG GLU          
SEQRES  27 A  435  GLN VAL GLN TRP TRP LEU LEU GLN LEU ALA GLN GLU LEU          
SEQRES  28 A  435  GLU GLU ARG LEU THR LYS ASP ARG ASN ASP ASN ASP ARG          
SEQRES  29 A  435  VAL ALA THR GLN LEU VAL VAL SER ILE ARG VAL GLN GLY          
SEQRES  30 A  435  ASP LYS ARG LEU SER SER LEU ARG ARG CYS CYS ALA LEU          
SEQRES  31 A  435  THR ARG TYR ASP ALA HIS LYS MET SER HIS ASP ALA PHE          
SEQRES  32 A  435  THR VAL ILE LYS ASN CYS ASN THR SER GLY ILE GLN THR          
SEQRES  33 A  435  GLU TRP SER PRO PRO LEU THR MET LEU PHE LEU CYS ALA          
SEQRES  34 A  435  THR LYS PHE SER ALA SER                                      
SEQRES   1 T   12   DC  DA  DT 8OG  DA  DT  DG  DA  DC  DG  DC  DT              
SEQRES   1 P    8   DA  DG  DC  DG  DT  DC  DA  DT                              
HET    8OG  T   4      46                                                       
HET    GOL  A 501       6                                                       
HET     CA  A 502       1                                                       
HET    CTP  T 101      29                                                       
HETNAM     8OG 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE                        
HETNAM     GOL GLYCEROL                                                         
HETNAM      CA CALCIUM ION                                                      
HETNAM     CTP CYTIDINE-5'-TRIPHOSPHATE                                         
HETSYN     8OG 8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE            
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   2  8OG    C10 H14 N5 O8 P                                              
FORMUL   4  GOL    C3 H8 O3                                                     
FORMUL   5   CA    CA 2+                                                        
FORMUL   6  CTP    C9 H16 N3 O14 P3                                             
FORMUL   7  HOH   *387(H2 O)                                                    
HELIX    1 AA1 CYS A   16  ASN A   26  1                                  11    
HELIX    2 AA2 PRO A   27  ARG A   30  5                                   4    
HELIX    3 AA3 SER A   51  ALA A   56  1                                   6    
HELIX    4 AA4 TRP A   64  CYS A   72  1                                   9    
HELIX    5 AA5 LEU A   89  SER A  104  1                                  16    
HELIX    6 AA6 LEU A  121  LEU A  132  1                                  12    
HELIX    7 AA7 SER A  138  LEU A  142  5                                   5    
HELIX    8 AA8 GLN A  162  LEU A  178  1                                  17    
HELIX    9 AA9 SER A  185  GLY A  209  1                                  25    
HELIX   10 AB1 ASN A  219  ASN A  230  1                                  12    
HELIX   11 AB2 SER A  242  GLN A  249  1                                   8    
HELIX   12 AB3 MET A  250  ILE A  255  5                                   6    
HELIX   13 AB4 GLY A  260  GLY A  271  1                                  12    
HELIX   14 AB5 TYR A  274  PHE A  281  5                                   8    
HELIX   15 AB6 THR A  282  GLY A  291  1                                  10    
HELIX   16 AB7 GLY A  291  CYS A  302  1                                  12    
HELIX   17 AB8 PRO A  326  ALA A  330  5                                   5    
HELIX   18 AB9 ARG A  334  ASP A  360  1                                  27    
HELIX   19 AC1 ASP A  391  LYS A  404  1                                  14    
HELIX   20 AC2 ASN A  405  ASN A  407  5                                   3    
SHEET    1 AA1 6 ILE A 109  ARG A 111  0                                        
SHEET    2 AA1 6 GLU A 116  ASP A 120 -1  O  TYR A 118   N  GLU A 110           
SHEET    3 AA1 6 VAL A   9  MET A  14 -1  N  ALA A  10   O  VAL A 119           
SHEET    4 AA1 6 CYS A 212  SER A 217 -1  O  SER A 217   N  VAL A   9           
SHEET    5 AA1 6 GLN A 235  LEU A 237  1  O  THR A 236   N  ILE A 216           
SHEET    6 AA1 6 THR A 145  ILE A 147  1  N  TYR A 146   O  LEU A 237           
SHEET    1 AA2 3 GLY A  46  VAL A  50  0                                        
SHEET    2 AA2 3 CYS A  34  GLN A  38 -1  N  VAL A  36   O  ILE A  48           
SHEET    3 AA2 3 LEU A  76  GLN A  79  1  O  ALA A  78   N  VAL A  37           
SHEET    1 AA3 2 GLU A  82  SER A  83  0                                        
SHEET    2 AA3 2 LYS A  86  ALA A  87 -1  O  LYS A  86   N  SER A  83           
SHEET    1 AA4 3 ILE A 319  ASN A 324  0                                        
SHEET    2 AA4 3 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3 AA4 3 LEU A 331  THR A 333 -1  N  LEU A 331   O  LEU A 419           
SHEET    1 AA5 4 ILE A 319  ASN A 324  0                                        
SHEET    2 AA5 4 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3 AA5 4 ARG A 361  VAL A 372 -1  N  VAL A 367   O  CYS A 425           
SHEET    4 AA5 4 LEU A 381  ALA A 386 -1  O  ARG A 383   N  VAL A 368           
LINK         OD1 ASP A  13                CA    CA A 502     1555   1555  2.34  
LINK         O   MET A  14                CA    CA A 502     1555   1555  2.29  
LINK         OD2 ASP A 115                CA    CA A 502     1555   1555  2.31  
LINK         O3'A DT T   3                 P  A8OG T   4     1555   1555  1.61  
LINK         O3'B DT T   3                 P  B8OG T   4     1555   1555  1.61  
LINK         O3'A8OG T   4                 P    DA T   5     1555   1555  1.60  
LINK         O3'B8OG T   4                 P    DA T   5     1555   1555  1.60  
LINK        CA    CA A 502                 O1G CTP T 101     1555   1555  2.29  
LINK        CA    CA A 502                 O1A CTP T 101     1555   1555  2.35  
LINK        CA    CA A 502                 O1B CTP T 101     1555   1555  2.28  
CISPEP   1 LEU A  150    PRO A  151          0        -0.33                     
CISPEP   2 LYS A  231    PRO A  232          0        -2.24                     
CISPEP   3 SER A  416    PRO A  417          0        -2.75                     
SITE     1 AC1 10 ARG A  24  PRO A 244  PHE A 247  SER A 248                    
SITE     2 AC1 10 GLY A 276  GLU A 277  HOH A 666  HOH A 682                    
SITE     3 AC1 10 HOH A 695  HOH A 733                                          
SITE     1 AC2  4 ASP A  13  MET A  14  ASP A 115  CTP T 101                    
SITE     1 AC3 27 ASP A  13  MET A  14  ASP A  15  CYS A  16                    
SITE     2 AC3 27 PHE A  17  PHE A  18  ILE A  48  TYR A  52                    
SITE     3 AC3 27 ARG A  55  ARG A  61  ASP A 115  LYS A 231                    
SITE     4 AC3 27  CA A 502  HOH A 694  HOH A 710   DT P   8                    
SITE     5 AC3 27  DT T   3  8OG T   4   DA T   5  HOH T 208                    
SITE     6 AC3 27 HOH T 210  HOH T 211  HOH T 213  HOH T 219                    
SITE     7 AC3 27 HOH T 224  HOH T 231  HOH T 233                               
CRYST1   99.124   99.124   81.384  90.00  90.00 120.00 P 61          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010088  0.005825  0.000000        0.00000                         
SCALE2      0.000000  0.011649  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.012287        0.00000