PDB Short entry for 5F28 HEADER TRANSCRIPTION, PROTEIN BINDING 01-DEC-15 5F28 TITLE CRYSTAL STRUCTURE OF FAT DOMAIN OF FOCAL ADHESION KINASE (FAK) BOUND TITLE 2 TO THE TRANSCRIPTION FACTOR MEF2C COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEF2C; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 1-95; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: FOCAL ADHESION KINASE 1; COMPND 8 CHAIN: E, F, G; COMPND 9 FRAGMENT: UNP RESIDUES 935-1083; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C41 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETSUMO; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: C41 (DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET28A-TEV KEYWDS TRANSCRIPTION FACTOR, KINASE, CARDIOVASCULAR DISEASE, TRANSCRIPTION, KEYWDS 2 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.C.CARDOSO,A.L.B.AMBROSIO,A.DESSEN,K.G.FRANCHINI REVDAT 5 27-SEP-23 5F28 1 REMARK REVDAT 4 01-JAN-20 5F28 1 REMARK REVDAT 3 17-APR-19 5F28 1 REMARK REVDAT 2 23-JAN-19 5F28 1 JRNL REMARK REVDAT 1 13-JUL-16 5F28 0 JRNL AUTH A.C.CARDOSO,A.H.M.PEREIRA,A.L.B.AMBROSIO,S.R.CONSONNI, JRNL AUTH 2 R.ROCHA DE OLIVEIRA,M.C.BAJGELMAN,S.M.G.DIAS,K.G.FRANCHINI JRNL TITL FAK FORMS A COMPLEX WITH MEF2 TO COUPLE BIOMECHANICAL JRNL TITL 2 SIGNALING TO TRANSCRIPTION IN CARDIOMYOCYTES. JRNL REF STRUCTURE V. 24 1301 2016 JRNL REFN ISSN 1878-4186 JRNL PMID 27427476 JRNL DOI 10.1016/J.STR.2016.06.003 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2196) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 37566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1880 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2260 - 6.8108 1.00 2747 145 0.1607 0.1471 REMARK 3 2 6.8108 - 5.4092 1.00 2732 160 0.2096 0.2231 REMARK 3 3 5.4092 - 4.7264 1.00 2753 141 0.1515 0.1832 REMARK 3 4 4.7264 - 4.2947 1.00 2768 120 0.1563 0.2047 REMARK 3 5 4.2947 - 3.9871 1.00 2742 148 0.1652 0.1857 REMARK 3 6 3.9871 - 3.7522 1.00 2738 141 0.1900 0.2438 REMARK 3 7 3.7522 - 3.5644 1.00 2721 174 0.2079 0.2641 REMARK 3 8 3.5644 - 3.4093 1.00 2761 148 0.2388 0.2555 REMARK 3 9 3.4093 - 3.2781 1.00 2751 143 0.2636 0.2715 REMARK 3 10 3.2781 - 3.1650 1.00 2758 144 0.2793 0.3241 REMARK 3 11 3.1650 - 3.0661 1.00 2754 129 0.2973 0.3126 REMARK 3 12 3.0661 - 2.9784 1.00 2747 144 0.3238 0.3834 REMARK 3 13 2.9784 - 2.9000 1.00 2714 143 0.3616 0.3762 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5429 REMARK 3 ANGLE : 0.593 7318 REMARK 3 CHIRALITY : 0.038 873 REMARK 3 PLANARITY : 0.004 919 REMARK 3 DIHEDRAL : 16.138 2095 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8729 REMARK 200 MONOCHROMATOR : SILICON 111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37566 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : 0.34400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : 1.55900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 1K40 (FAT) AND 3KOV (MEF2) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MAGNSEIUM ACETATE, 0.1M MES, PH REMARK 280 6.5, 12% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 69.60500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 69.60500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.17500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 69.60500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 69.60500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.17500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 69.60500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 69.60500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.17500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 69.60500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 69.60500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.17500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRADECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 42370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 65140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -317.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ARG A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 ILE A 6 REMARK 465 GLN A 7 REMARK 465 ILE A 8 REMARK 465 THR A 9 REMARK 465 ARG A 10 REMARK 465 ILE A 11 REMARK 465 MET A 12 REMARK 465 ASP A 13 REMARK 465 GLU A 14 REMARK 465 ARG A 15 REMARK 465 ASN A 16 REMARK 465 ARG A 17 REMARK 465 GLN A 18 REMARK 465 VAL A 19 REMARK 465 THR A 20 REMARK 465 LYS A 91 REMARK 465 GLU A 92 REMARK 465 ASN A 93 REMARK 465 LYS A 94 REMARK 465 GLY A 95 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 5 REMARK 465 ILE B 6 REMARK 465 GLN B 7 REMARK 465 ILE B 8 REMARK 465 THR B 9 REMARK 465 ARG B 10 REMARK 465 ILE B 11 REMARK 465 MET B 12 REMARK 465 ASP B 13 REMARK 465 GLU B 14 REMARK 465 ARG B 15 REMARK 465 ASN B 16 REMARK 465 ARG B 17 REMARK 465 GLN B 18 REMARK 465 GLU B 92 REMARK 465 ASN B 93 REMARK 465 LYS B 94 REMARK 465 GLY B 95 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 LYS C 4 REMARK 465 LYS C 5 REMARK 465 ILE C 6 REMARK 465 GLN C 7 REMARK 465 ILE C 8 REMARK 465 THR C 9 REMARK 465 ARG C 10 REMARK 465 ILE C 11 REMARK 465 MET C 12 REMARK 465 ASP C 13 REMARK 465 GLU C 14 REMARK 465 ARG C 15 REMARK 465 ASN C 16 REMARK 465 ARG C 17 REMARK 465 GLN C 18 REMARK 465 VAL C 19 REMARK 465 GLU C 92 REMARK 465 ASN C 93 REMARK 465 LYS C 94 REMARK 465 GLY C 95 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 ARG D 3 REMARK 465 LYS D 4 REMARK 465 LYS D 5 REMARK 465 ILE D 6 REMARK 465 GLN D 7 REMARK 465 ILE D 8 REMARK 465 THR D 9 REMARK 465 ARG D 10 REMARK 465 ILE D 11 REMARK 465 MET D 12 REMARK 465 ASP D 13 REMARK 465 GLU D 14 REMARK 465 ARG D 15 REMARK 465 ASN D 16 REMARK 465 ARG D 17 REMARK 465 GLN D 18 REMARK 465 VAL D 19 REMARK 465 GLU D 92 REMARK 465 ASN D 93 REMARK 465 LYS D 94 REMARK 465 GLY D 95 REMARK 465 LEU E 904 REMARK 465 GLN E 905 REMARK 465 PRO E 906 REMARK 465 GLN E 907 REMARK 465 GLU E 908 REMARK 465 ILE E 909 REMARK 465 SER E 910 REMARK 465 PRO E 911 REMARK 465 PRO E 912 REMARK 465 PRO E 913 REMARK 465 THR E 914 REMARK 465 ALA E 915 REMARK 465 ASN E 916 REMARK 465 MET E 1045 REMARK 465 LEU E 1046 REMARK 465 GLY E 1047 REMARK 465 GLN E 1048 REMARK 465 THR E 1049 REMARK 465 ARG E 1050 REMARK 465 PRO E 1051 REMARK 465 HIS E 1052 REMARK 465 LEU F 904 REMARK 465 GLN F 905 REMARK 465 PRO F 906 REMARK 465 GLN F 907 REMARK 465 GLU F 908 REMARK 465 ILE F 909 REMARK 465 SER F 910 REMARK 465 PRO F 911 REMARK 465 PRO F 912 REMARK 465 PRO F 913 REMARK 465 THR F 914 REMARK 465 ALA F 915 REMARK 465 ASN F 916 REMARK 465 MET F 1045 REMARK 465 LEU F 1046 REMARK 465 GLY F 1047 REMARK 465 GLN F 1048 REMARK 465 THR F 1049 REMARK 465 ARG F 1050 REMARK 465 PRO F 1051 REMARK 465 HIS F 1052 REMARK 465 LEU G 904 REMARK 465 GLN G 905 REMARK 465 PRO G 906 REMARK 465 GLN G 907 REMARK 465 GLU G 908 REMARK 465 ILE G 909 REMARK 465 SER G 910 REMARK 465 PRO G 911 REMARK 465 PRO G 912 REMARK 465 PRO G 913 REMARK 465 THR G 914 REMARK 465 ALA G 915 REMARK 465 THR G 1049 REMARK 465 ARG G 1050 REMARK 465 PRO G 1051 REMARK 465 HIS G 1052 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 74 CD REMARK 480 GLN F 1040 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH G 1106 O HOH G 1108 0.42 REMARK 500 O HOH C 105 O HOH C 107 0.54 REMARK 500 O TYR B 72 NH2 ARG F 962 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER E 1011 OE1 GLU E 1015 2655 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 60 -69.67 -109.53 REMARK 500 THR B 60 -102.97 -120.49 REMARK 500 GLU B 74 145.11 -176.58 REMARK 500 HIS B 76 -178.23 -176.70 REMARK 500 ASN B 89 32.49 -97.04 REMARK 500 LYS B 90 75.88 -156.77 REMARK 500 THR C 60 -67.46 -137.92 REMARK 500 THR D 60 -99.76 -129.73 REMARK 500 ASP E 918 -70.65 -81.91 REMARK 500 ARG E 919 -8.29 83.69 REMARK 500 TYR E1007 62.46 -102.75 REMARK 500 ALA F 945 65.96 -176.83 REMARK 500 GLU F 948 -38.86 85.31 REMARK 500 TYR F1007 53.68 -116.47 REMARK 500 PRO G 944 52.94 -115.93 REMARK 500 REMARK 500 REMARK: NULL DBREF 5F28 A 1 95 UNP Q8CFN5 MEF2C_MOUSE 1 95 DBREF 5F28 B 1 95 UNP Q8CFN5 MEF2C_MOUSE 1 95 DBREF 5F28 C 1 95 UNP Q8CFN5 MEF2C_MOUSE 1 95 DBREF 5F28 D 1 95 UNP Q8CFN5 MEF2C_MOUSE 1 95 DBREF 5F28 E 904 1052 UNP P34152 FAK1_MOUSE 935 1083 DBREF 5F28 F 904 1052 UNP P34152 FAK1_MOUSE 935 1083 DBREF 5F28 G 904 1052 UNP P34152 FAK1_MOUSE 935 1083 SEQRES 1 A 95 MET GLY ARG LYS LYS ILE GLN ILE THR ARG ILE MET ASP SEQRES 2 A 95 GLU ARG ASN ARG GLN VAL THR PHE THR LYS ARG LYS PHE SEQRES 3 A 95 GLY LEU MET LYS LYS ALA TYR GLU LEU SER VAL LEU CYS SEQRES 4 A 95 ASP CYS GLU ILE ALA LEU ILE ILE PHE ASN SER THR ASN SEQRES 5 A 95 LYS LEU PHE GLN TYR ALA SER THR ASP MET ASP LYS VAL SEQRES 6 A 95 LEU LEU LYS TYR THR GLU TYR ASN GLU PRO HIS GLU SER SEQRES 7 A 95 ARG THR ASN SER ASP ILE VAL GLU ALA LEU ASN LYS LYS SEQRES 8 A 95 GLU ASN LYS GLY SEQRES 1 B 95 MET GLY ARG LYS LYS ILE GLN ILE THR ARG ILE MET ASP SEQRES 2 B 95 GLU ARG ASN ARG GLN VAL THR PHE THR LYS ARG LYS PHE SEQRES 3 B 95 GLY LEU MET LYS LYS ALA TYR GLU LEU SER VAL LEU CYS SEQRES 4 B 95 ASP CYS GLU ILE ALA LEU ILE ILE PHE ASN SER THR ASN SEQRES 5 B 95 LYS LEU PHE GLN TYR ALA SER THR ASP MET ASP LYS VAL SEQRES 6 B 95 LEU LEU LYS TYR THR GLU TYR ASN GLU PRO HIS GLU SER SEQRES 7 B 95 ARG THR ASN SER ASP ILE VAL GLU ALA LEU ASN LYS LYS SEQRES 8 B 95 GLU ASN LYS GLY SEQRES 1 C 95 MET GLY ARG LYS LYS ILE GLN ILE THR ARG ILE MET ASP SEQRES 2 C 95 GLU ARG ASN ARG GLN VAL THR PHE THR LYS ARG LYS PHE SEQRES 3 C 95 GLY LEU MET LYS LYS ALA TYR GLU LEU SER VAL LEU CYS SEQRES 4 C 95 ASP CYS GLU ILE ALA LEU ILE ILE PHE ASN SER THR ASN SEQRES 5 C 95 LYS LEU PHE GLN TYR ALA SER THR ASP MET ASP LYS VAL SEQRES 6 C 95 LEU LEU LYS TYR THR GLU TYR ASN GLU PRO HIS GLU SER SEQRES 7 C 95 ARG THR ASN SER ASP ILE VAL GLU ALA LEU ASN LYS LYS SEQRES 8 C 95 GLU ASN LYS GLY SEQRES 1 D 95 MET GLY ARG LYS LYS ILE GLN ILE THR ARG ILE MET ASP SEQRES 2 D 95 GLU ARG ASN ARG GLN VAL THR PHE THR LYS ARG LYS PHE SEQRES 3 D 95 GLY LEU MET LYS LYS ALA TYR GLU LEU SER VAL LEU CYS SEQRES 4 D 95 ASP CYS GLU ILE ALA LEU ILE ILE PHE ASN SER THR ASN SEQRES 5 D 95 LYS LEU PHE GLN TYR ALA SER THR ASP MET ASP LYS VAL SEQRES 6 D 95 LEU LEU LYS TYR THR GLU TYR ASN GLU PRO HIS GLU SER SEQRES 7 D 95 ARG THR ASN SER ASP ILE VAL GLU ALA LEU ASN LYS LYS SEQRES 8 D 95 GLU ASN LYS GLY SEQRES 1 E 149 LEU GLN PRO GLN GLU ILE SER PRO PRO PRO THR ALA ASN SEQRES 2 E 149 LEU ASP ARG SER ASN ASP LYS VAL TYR GLU ASN VAL THR SEQRES 3 E 149 GLY LEU VAL LYS ALA VAL ILE GLU MET SER SER LYS ILE SEQRES 4 E 149 GLN PRO ALA PRO PRO GLU GLU TYR VAL PRO MET VAL LYS SEQRES 5 E 149 GLU VAL GLY LEU ALA LEU ARG THR LEU LEU ALA THR VAL SEQRES 6 E 149 ASP GLU THR ILE PRO ALA LEU PRO ALA SER THR HIS ARG SEQRES 7 E 149 GLU ILE GLU MET ALA GLN LYS LEU LEU ASN SER ASP LEU SEQRES 8 E 149 GLY GLU LEU ILE SER LYS MET LYS LEU ALA GLN GLN TYR SEQRES 9 E 149 VAL MET THR SER LEU GLN GLN GLU TYR LYS LYS GLN MET SEQRES 10 E 149 LEU THR ALA ALA HIS ALA LEU ALA VAL ASP ALA LYS ASN SEQRES 11 E 149 LEU LEU ASP VAL ILE ASP GLN ALA ARG LEU LYS MET LEU SEQRES 12 E 149 GLY GLN THR ARG PRO HIS SEQRES 1 F 149 LEU GLN PRO GLN GLU ILE SER PRO PRO PRO THR ALA ASN SEQRES 2 F 149 LEU ASP ARG SER ASN ASP LYS VAL TYR GLU ASN VAL THR SEQRES 3 F 149 GLY LEU VAL LYS ALA VAL ILE GLU MET SER SER LYS ILE SEQRES 4 F 149 GLN PRO ALA PRO PRO GLU GLU TYR VAL PRO MET VAL LYS SEQRES 5 F 149 GLU VAL GLY LEU ALA LEU ARG THR LEU LEU ALA THR VAL SEQRES 6 F 149 ASP GLU THR ILE PRO ALA LEU PRO ALA SER THR HIS ARG SEQRES 7 F 149 GLU ILE GLU MET ALA GLN LYS LEU LEU ASN SER ASP LEU SEQRES 8 F 149 GLY GLU LEU ILE SER LYS MET LYS LEU ALA GLN GLN TYR SEQRES 9 F 149 VAL MET THR SER LEU GLN GLN GLU TYR LYS LYS GLN MET SEQRES 10 F 149 LEU THR ALA ALA HIS ALA LEU ALA VAL ASP ALA LYS ASN SEQRES 11 F 149 LEU LEU ASP VAL ILE ASP GLN ALA ARG LEU LYS MET LEU SEQRES 12 F 149 GLY GLN THR ARG PRO HIS SEQRES 1 G 149 LEU GLN PRO GLN GLU ILE SER PRO PRO PRO THR ALA ASN SEQRES 2 G 149 LEU ASP ARG SER ASN ASP LYS VAL TYR GLU ASN VAL THR SEQRES 3 G 149 GLY LEU VAL LYS ALA VAL ILE GLU MET SER SER LYS ILE SEQRES 4 G 149 GLN PRO ALA PRO PRO GLU GLU TYR VAL PRO MET VAL LYS SEQRES 5 G 149 GLU VAL GLY LEU ALA LEU ARG THR LEU LEU ALA THR VAL SEQRES 6 G 149 ASP GLU THR ILE PRO ALA LEU PRO ALA SER THR HIS ARG SEQRES 7 G 149 GLU ILE GLU MET ALA GLN LYS LEU LEU ASN SER ASP LEU SEQRES 8 G 149 GLY GLU LEU ILE SER LYS MET LYS LEU ALA GLN GLN TYR SEQRES 9 G 149 VAL MET THR SER LEU GLN GLN GLU TYR LYS LYS GLN MET SEQRES 10 G 149 LEU THR ALA ALA HIS ALA LEU ALA VAL ASP ALA LYS ASN SEQRES 11 G 149 LEU LEU ASP VAL ILE ASP GLN ALA ARG LEU LYS MET LEU SEQRES 12 G 149 GLY GLN THR ARG PRO HIS FORMUL 8 HOH *58(H2 O) HELIX 1 AA1 PHE A 21 CYS A 39 1 19 HELIX 2 AA2 ASP A 61 GLU A 71 1 11 HELIX 3 AA3 THR A 80 ASN A 89 1 10 HELIX 4 AA4 THR B 20 CYS B 39 1 20 HELIX 5 AA5 ASP B 61 GLU B 71 1 11 HELIX 6 AA6 ASN B 81 LEU B 88 1 8 HELIX 7 AA7 PHE C 21 ASP C 40 1 20 HELIX 8 AA8 ASP C 61 GLU C 71 1 11 HELIX 9 AA9 THR C 80 ASN C 89 1 10 HELIX 10 AB1 PHE D 21 CYS D 39 1 19 HELIX 11 AB2 ASP D 61 GLU D 71 1 11 HELIX 12 AB3 THR D 80 ASN D 89 1 10 HELIX 13 AB4 ASP E 922 GLN E 943 1 22 HELIX 14 AB5 PRO E 946 GLU E 948 5 3 HELIX 15 AB6 GLU E 949 ILE E 972 1 24 HELIX 16 AB7 PRO E 973 LEU E 975 5 3 HELIX 17 AB8 PRO E 976 SER E 978 5 3 HELIX 18 AB9 THR E 979 GLN E 1005 1 27 HELIX 19 AC1 LEU E 1012 LEU E 1043 1 32 HELIX 20 AC2 ASP F 922 GLN F 943 1 22 HELIX 21 AC3 GLU F 949 ILE F 972 1 24 HELIX 22 AC4 PRO F 973 LEU F 975 5 3 HELIX 23 AC5 PRO F 976 SER F 978 5 3 HELIX 24 AC6 THR F 979 TYR F 1007 1 29 HELIX 25 AC7 LEU F 1012 LEU F 1043 1 32 HELIX 26 AC8 ASP G 922 GLN G 943 1 22 HELIX 27 AC9 PRO G 946 ILE G 972 1 27 HELIX 28 AD1 PRO G 973 LEU G 975 5 3 HELIX 29 AD2 PRO G 976 SER G 978 5 3 HELIX 30 AD3 THR G 979 TYR G 1007 1 29 HELIX 31 AD4 LEU G 1012 LEU G 1046 1 35 SHEET 1 AA1 6 GLU A 77 ARG A 79 0 SHEET 2 AA1 6 LEU B 54 ALA B 58 1 O GLN B 56 N GLU A 77 SHEET 3 AA1 6 GLU B 42 PHE B 48 -1 N LEU B 45 O TYR B 57 SHEET 4 AA1 6 GLU A 42 PHE A 48 -1 N GLU A 42 O PHE B 48 SHEET 5 AA1 6 LEU A 54 ALA A 58 -1 O PHE A 55 N ILE A 47 SHEET 6 AA1 6 GLU B 77 THR B 80 1 O ARG B 79 N GLN A 56 SHEET 1 AA2 6 GLU C 77 ARG C 79 0 SHEET 2 AA2 6 LEU D 54 ALA D 58 1 O GLN D 56 N ARG C 79 SHEET 3 AA2 6 GLU D 42 PHE D 48 -1 N ILE D 47 O PHE D 55 SHEET 4 AA2 6 GLU C 42 PHE C 48 -1 N GLU C 42 O PHE D 48 SHEET 5 AA2 6 LEU C 54 ALA C 58 -1 O TYR C 57 N LEU C 45 SHEET 6 AA2 6 GLU D 77 ARG D 79 1 O ARG D 79 N ALA C 58 CISPEP 1 PRO F 944 ALA F 945 0 -18.61 CRYST1 139.210 139.210 90.350 90.00 90.00 90.00 P 42 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007183 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007183 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011068 0.00000