PDB Short entry for 5FDK HEADER HYDROLASE 16-DEC-15 5FDK TITLE CRYSTAL STRUCTURE OF RECU(D88N) IN COMPLEX WITH PALINDROMIC DNA DUPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOLLIDAY JUNCTION RESOLVASE RECU; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.1.22.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PALINDROMIC DNA; COMPND 9 CHAIN: E, F, G, H; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: RECU, PRFA, YPPB, BSU22310; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCB210; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS RESOLVASE, HOLLIDAY JUNCTION, RECU, DNA, COMPLEX, DNA-BINDING KEYWDS 2 PROTEINS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.KHAVNEKAR,J.B.RAFFERTY,A.KALE REVDAT 3 08-FEB-17 5FDK 1 JRNL REVDAT 2 14-DEC-16 5FDK 1 JRNL REVDAT 1 07-DEC-16 5FDK 0 JRNL AUTH S.KHAVNEKAR,S.C.DANTU,S.SEDELNIKOVA,S.AYORA,J.RAFFERTY, JRNL AUTH 2 A.KALE JRNL TITL STRUCTURAL INSIGHTS INTO DYNAMICS OF RECU-HJ COMPLEX JRNL TITL 2 FORMATION ELUCIDATES KEY ROLE OF NTR AND STALK REGION TOWARD JRNL TITL 3 FORMATION OF REACTIVE STATE. JRNL REF NUCLEIC ACIDS RES. V. 45 975 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 27903910 JRNL DOI 10.1093/NAR/GKW1165 REMARK 2 REMARK 2 RESOLUTION. 3.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 20716 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.260 REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.329 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7000 - 6.4109 0.99 2560 127 0.2369 0.2921 REMARK 3 2 6.4109 - 5.0903 1.00 2506 114 0.2884 0.3241 REMARK 3 3 5.0903 - 4.4473 1.00 2438 143 0.2394 0.3285 REMARK 3 4 4.4473 - 4.0409 1.00 2454 134 0.2329 0.3503 REMARK 3 5 4.0409 - 3.7514 1.00 2446 129 0.2561 0.3157 REMARK 3 6 3.7514 - 3.5303 1.00 2435 122 0.2884 0.4198 REMARK 3 7 3.5303 - 3.3535 1.00 2435 138 0.3061 0.3920 REMARK 3 8 3.3535 - 3.2076 0.99 2379 156 0.3112 0.3671 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.560 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 118.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 6367 REMARK 3 ANGLE : 1.657 8891 REMARK 3 CHIRALITY : 0.115 995 REMARK 3 PLANARITY : 0.009 1020 REMARK 3 DIHEDRAL : 22.033 2184 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FDK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20730 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.208 REMARK 200 RESOLUTION RANGE LOW (A) : 116.024 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.09081 REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 1.41500 REMARK 200 R SYM FOR SHELL (I) : 1.41500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE PH 9, 10% PEG 6000, PH REMARK 280 9.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 72.22350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.69826 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 103.44767 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 72.22350 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 41.69826 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 103.44767 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 72.22350 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 41.69826 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 103.44767 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 72.22350 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 41.69826 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 103.44767 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 72.22350 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 41.69826 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 103.44767 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 72.22350 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 41.69826 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 103.44767 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 83.39651 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 206.89533 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 83.39651 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 206.89533 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 83.39651 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 206.89533 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 83.39651 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 206.89533 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 83.39651 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 206.89533 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 83.39651 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 206.89533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -83.39651 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 103.44767 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 ARG A 3 REMARK 465 TYR A 4 REMARK 465 PRO A 5 REMARK 465 ASN A 6 REMARK 465 GLY A 7 REMARK 465 LYS A 8 REMARK 465 THR A 9 REMARK 465 PHE A 10 REMARK 465 GLN A 11 REMARK 465 PRO A 12 REMARK 465 LYS A 13 REMARK 465 HIS A 14 REMARK 465 SER A 15 REMARK 465 VAL A 16 REMARK 465 SER A 17 REMARK 465 SER A 18 REMARK 465 GLN A 19 REMARK 465 ASN A 20 REMARK 465 SER A 21 REMARK 465 GLN A 22 REMARK 465 MET B 1 REMARK 465 ILE B 2 REMARK 465 ARG B 3 REMARK 465 TYR B 4 REMARK 465 PRO B 5 REMARK 465 ASN B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 THR B 9 REMARK 465 PHE B 10 REMARK 465 GLN B 11 REMARK 465 PRO B 12 REMARK 465 LYS B 13 REMARK 465 HIS B 14 REMARK 465 SER B 15 REMARK 465 VAL B 16 REMARK 465 SER B 17 REMARK 465 SER B 18 REMARK 465 GLN B 19 REMARK 465 ASN B 20 REMARK 465 SER B 21 REMARK 465 GLN B 22 REMARK 465 LYS B 23 REMARK 465 ARG B 24 REMARK 465 ALA B 25 REMARK 465 PRO B 26 REMARK 465 SER B 27 REMARK 465 TYR B 28 REMARK 465 SER B 29 REMARK 465 ASN B 30 REMARK 465 ARG B 31 REMARK 465 GLY B 32 REMARK 465 MET B 33 REMARK 465 MET C 1 REMARK 465 ILE C 2 REMARK 465 ARG C 3 REMARK 465 TYR C 4 REMARK 465 PRO C 5 REMARK 465 ASN C 6 REMARK 465 GLY C 7 REMARK 465 LYS C 8 REMARK 465 THR C 9 REMARK 465 PHE C 10 REMARK 465 GLN C 11 REMARK 465 PRO C 12 REMARK 465 LYS C 13 REMARK 465 HIS C 14 REMARK 465 SER C 15 REMARK 465 VAL C 16 REMARK 465 SER C 17 REMARK 465 SER C 18 REMARK 465 GLN C 19 REMARK 465 ASN C 20 REMARK 465 SER C 21 REMARK 465 GLN C 22 REMARK 465 LYS C 23 REMARK 465 ARG C 24 REMARK 465 ALA C 25 REMARK 465 DA G 1 REMARK 465 DT H 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 SER A 27 OG REMARK 470 TYR A 28 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 29 OG REMARK 470 ASN A 30 CG OD1 ND2 REMARK 470 ARG A 31 CG CD NE CZ NH1 NH2 REMARK 470 MET A 33 CG SD CE REMARK 470 THR A 42 OG1 CG2 REMARK 470 ILE A 54 CG1 CG2 CD1 REMARK 470 ILE A 63 CG1 CG2 CD1 REMARK 470 ASN A 65 CG OD1 ND2 REMARK 470 HIS A 67 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 ARG A 71 CG CD NE CZ NH1 NH2 REMARK 470 SER A 72 OG REMARK 470 VAL A 75 CG1 CG2 REMARK 470 ILE A 76 CG1 CG2 CD1 REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 THR A 87 OG1 CG2 REMARK 470 ILE A 92 CG1 CG2 CD1 REMARK 470 ARG A 96 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 ASN A 107 CG OD1 ND2 REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LEU A 113 CG CD1 CD2 REMARK 470 GLU A 122 CD OE1 OE2 REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 PHE A 153 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 LYS A 161 CD CE NZ REMARK 470 ASN A 162 CG OD1 ND2 REMARK 470 ARG A 168 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 GLU A 174 CG CD OE1 OE2 REMARK 470 THR A 175 OG1 CG2 REMARK 470 LEU A 181 CG CD1 CD2 REMARK 470 ARG A 186 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 190 CG1 CG2 CD1 REMARK 470 LEU A 196 CG CD1 CD2 REMARK 470 SER A 199 OG REMARK 470 ASN B 43 CG OD1 ND2 REMARK 470 TYR B 45 CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE B 51 CG1 CG2 CD1 REMARK 470 LYS B 56 CE NZ REMARK 470 LYS B 57 CD CE NZ REMARK 470 GLN B 62 CG CD OE1 NE2 REMARK 470 VAL B 64 CG1 CG2 REMARK 470 HIS B 67 CG ND1 CD2 CE1 NE2 REMARK 470 TYR B 68 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 70 CG CD CE NZ REMARK 470 ARG B 71 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 75 CG1 CG2 REMARK 470 LYS B 77 CG CD CE NZ REMARK 470 GLU B 78 CG CD OE1 OE2 REMARK 470 TYR B 80 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 ARG B 96 CD NE CZ NH1 NH2 REMARK 470 PHE B 100 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 LYS B 108 CG CD CE NZ REMARK 470 HIS B 117 CG ND1 CD2 CE1 NE2 REMARK 470 MET B 124 CG SD CE REMARK 470 LYS B 128 NZ REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 GLU B 160 CG CD OE1 OE2 REMARK 470 LYS B 161 CG CD CE NZ REMARK 470 ASN B 162 CG OD1 ND2 REMARK 470 ARG B 164 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 165 CG CD CE NZ REMARK 470 ARG B 168 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 171 CG CD OE1 OE2 REMARK 470 THR B 175 OG1 CG2 REMARK 470 ILE B 179 CG1 CG2 CD1 REMARK 470 LEU B 181 CG CD1 CD2 REMARK 470 TYR B 197 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B 198 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 199 OG REMARK 470 SER C 27 OG REMARK 470 TYR C 28 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER C 29 OG REMARK 470 ASN C 30 CG OD1 ND2 REMARK 470 ARG C 31 CG CD NE CZ NH1 NH2 REMARK 470 MET C 33 CG SD CE REMARK 470 GLU C 36 CG CD OE1 OE2 REMARK 470 LYS C 44 NZ REMARK 470 TYR C 46 OH REMARK 470 ILE C 51 CG1 CG2 CD1 REMARK 470 LYS C 56 CG CD CE NZ REMARK 470 LYS C 57 CG CD CE NZ REMARK 470 GLN C 62 CG CD OE1 NE2 REMARK 470 ILE C 63 CG1 CG2 CD1 REMARK 470 VAL C 64 CG1 CG2 REMARK 470 ASN C 65 CG OD1 ND2 REMARK 470 TYR C 68 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 70 CG CD CE NZ REMARK 470 ARG C 71 CG CD NE CZ NH1 NH2 REMARK 470 SER C 72 OG REMARK 470 VAL C 75 CG1 CG2 REMARK 470 ILE C 76 CG1 CG2 CD1 REMARK 470 LYS C 77 CG CD CE NZ REMARK 470 GLU C 78 CG CD OE1 OE2 REMARK 470 LYS C 82 CG CD CE NZ REMARK 470 THR C 86 OG1 CG2 REMARK 470 THR C 87 OG1 CG2 REMARK 470 ILE C 92 CD1 REMARK 470 LYS C 103 CG CD CE NZ REMARK 470 LYS C 106 CG CD CE NZ REMARK 470 ASN C 107 CG OD1 ND2 REMARK 470 LYS C 108 CG CD CE NZ REMARK 470 LYS C 125 CG CD CE NZ REMARK 470 LYS C 128 CG CD CE NZ REMARK 470 PHE C 135 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL C 144 CG1 CG2 REMARK 470 GLU C 160 CG CD OE1 OE2 REMARK 470 LYS C 161 CG CD CE NZ REMARK 470 ASN C 162 CG OD1 ND2 REMARK 470 ARG C 164 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 165 CG CD CE NZ REMARK 470 ILE C 167 CD1 REMARK 470 LYS C 169 CG CD CE NZ REMARK 470 THR C 175 OG1 CG2 REMARK 470 ILE C 179 CG1 CG2 CD1 REMARK 470 LEU C 181 CG CD1 CD2 REMARK 470 TYR C 183 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE C 187 CG1 CG2 CD1 REMARK 470 ILE C 193 CG1 CG2 CD1 REMARK 470 GLU C 194 CG CD OE1 OE2 REMARK 470 SER C 199 OG REMARK 470 MET D 1 CG SD CE REMARK 470 ILE D 2 CG1 CG2 CD1 REMARK 470 ARG D 3 CG CD NE CZ NH1 NH2 REMARK 470 TYR D 4 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN D 6 CG OD1 ND2 REMARK 470 LYS D 8 CG CD CE NZ REMARK 470 THR D 9 OG1 CG2 REMARK 470 PHE D 10 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN D 11 CG CD OE1 NE2 REMARK 470 LYS D 13 CG CD CE NZ REMARK 470 HIS D 14 CG ND1 CD2 CE1 NE2 REMARK 470 SER D 15 OG REMARK 470 VAL D 16 CG1 CG2 REMARK 470 SER D 17 OG REMARK 470 SER D 18 OG REMARK 470 GLN D 19 CG CD OE1 NE2 REMARK 470 ASN D 20 CG OD1 ND2 REMARK 470 SER D 21 OG REMARK 470 GLN D 22 CG CD OE1 NE2 REMARK 470 LYS D 23 CG CD CE NZ REMARK 470 ARG D 24 CG CD NE CZ NH1 NH2 REMARK 470 SER D 27 OG REMARK 470 SER D 29 OG REMARK 470 ASN D 30 CG OD1 ND2 REMARK 470 ARG D 31 CG CD NE CZ NH1 NH2 REMARK 470 MET D 33 CG SD CE REMARK 470 THR D 34 OG1 CG2 REMARK 470 GLU D 41 CG CD OE1 OE2 REMARK 470 LYS D 57 CE NZ REMARK 470 VAL D 61 CG1 CG2 REMARK 470 GLN D 62 CG CD OE1 NE2 REMARK 470 ILE D 63 CG1 CG2 CD1 REMARK 470 VAL D 64 CG1 CG2 REMARK 470 ASN D 65 CG OD1 ND2 REMARK 470 VAL D 66 CG1 CG2 REMARK 470 HIS D 67 CG ND1 CD2 CE1 NE2 REMARK 470 LYS D 70 CG CD CE NZ REMARK 470 ARG D 71 CG CD NE CZ NH1 NH2 REMARK 470 VAL D 75 CG1 CG2 REMARK 470 ILE D 76 CG1 CG2 CD1 REMARK 470 LYS D 77 CG CD CE NZ REMARK 470 GLU D 78 CG CD OE1 OE2 REMARK 470 TYR D 80 CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE D 81 CD2 CE1 CE2 CZ REMARK 470 LYS D 82 CG CD CE NZ REMARK 470 GLN D 83 CG CD OE1 NE2 REMARK 470 SER D 84 OG REMARK 470 THR D 86 OG1 CG2 REMARK 470 LYS D 94 CG CD CE NZ REMARK 470 ILE D 98 CD1 REMARK 470 PHE D 100 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS D 103 CG CD CE NZ REMARK 470 THR D 105 OG1 CG2 REMARK 470 LYS D 106 CG CD CE NZ REMARK 470 ASN D 107 CG OD1 ND2 REMARK 470 LYS D 108 CG CD CE NZ REMARK 470 PHE D 116 CD1 CD2 CE1 CE2 CZ REMARK 470 GLN D 120 CG CD OE1 NE2 REMARK 470 LYS D 125 CG CD CE NZ REMARK 470 VAL D 127 CG1 CG2 REMARK 470 LYS D 128 CG CD CE NZ REMARK 470 PHE D 135 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE D 137 CG1 CG2 CD1 REMARK 470 ILE D 138 CG1 CG2 CD1 REMARK 470 VAL D 144 CG1 CG2 REMARK 470 LYS D 151 CG CD CE NZ REMARK 470 LEU D 152 CG CD1 CD2 REMARK 470 ARG D 158 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 159 CG CD CE NZ REMARK 470 GLU D 160 CG CD OE1 OE2 REMARK 470 ASN D 162 CG OD1 ND2 REMARK 470 ARG D 164 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 165 CG CD CE NZ REMARK 470 ARG D 168 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 169 CG CD CE NZ REMARK 470 THR D 175 OG1 CG2 REMARK 470 ILE D 179 CG1 CG2 CD1 REMARK 470 TYR D 183 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE D 187 CG1 CG2 CD1 REMARK 470 ILE D 190 CD1 REMARK 470 SER D 191 OG REMARK 470 ILE D 193 CG1 CG2 CD1 REMARK 470 SER D 199 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C SER B 72 CA ALA B 73 1.74 REMARK 500 O LEU A 39 ND2 ASN A 43 1.89 REMARK 500 O GLU A 36 CB ASN A 40 2.01 REMARK 500 CG PRO B 69 O SER B 72 2.08 REMARK 500 O ASP B 38 OG1 THR B 42 2.10 REMARK 500 CD PRO B 69 N ALA B 74 2.12 REMARK 500 O PRO A 185 N ILE A 187 2.17 REMARK 500 OG1 THR D 87 OD1 ASP D 99 2.17 REMARK 500 N PHE D 111 O ILE D 167 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CG2 THR D 109 OP2 DT G 7 7445 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO D 5 CD PRO D 5 N -0.122 REMARK 500 DC E 10 O3' DC E 10 C3' -0.046 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 47 N - CA - C ANGL. DEV. = 24.9 DEGREES REMARK 500 THR A 48 N - CA - C ANGL. DEV. = 17.0 DEGREES REMARK 500 ARG A 186 CB - CA - C ANGL. DEV. = 15.5 DEGREES REMARK 500 ARG A 186 N - CA - C ANGL. DEV. = -30.0 DEGREES REMARK 500 PRO B 69 C - N - CD ANGL. DEV. = 13.1 DEGREES REMARK 500 SER B 72 CB - CA - C ANGL. DEV. = 34.9 DEGREES REMARK 500 SER B 72 N - CA - C ANGL. DEV. = -30.5 DEGREES REMARK 500 ALA B 73 C - N - CA ANGL. DEV. = -43.0 DEGREES REMARK 500 ILE C 187 N - CA - C ANGL. DEV. = -19.7 DEGREES REMARK 500 GLU D 104 N - CA - C ANGL. DEV. = 17.6 DEGREES REMARK 500 PHE D 141 N - CA - C ANGL. DEV. = 18.0 DEGREES REMARK 500 PRO D 185 C - N - CD ANGL. DEV. = -15.0 DEGREES REMARK 500 ILE D 187 N - CA - C ANGL. DEV. = -26.5 DEGREES REMARK 500 ASP D 188 N - CA - CB ANGL. DEV. = 18.1 DEGREES REMARK 500 DA E 1 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC E 4 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT E 7 O4' - C1' - C2' ANGL. DEV. = -6.9 DEGREES REMARK 500 DT E 8 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 DT E 8 N1 - C1' - C2' ANGL. DEV. = 9.6 DEGREES REMARK 500 DG E 9 O4' - C1' - C2' ANGL. DEV. = -7.2 DEGREES REMARK 500 DT E 12 N3 - C4 - O4 ANGL. DEV. = 3.9 DEGREES REMARK 500 DC F 4 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DA F 6 O4' - C4' - C3' ANGL. DEV. = -2.6 DEGREES REMARK 500 DA F 6 C4' - C3' - C2' ANGL. DEV. = -6.1 DEGREES REMARK 500 DT F 8 C3' - C2' - C1' ANGL. DEV. = -5.4 DEGREES REMARK 500 DT F 8 O4' - C1' - N1 ANGL. DEV. = -6.0 DEGREES REMARK 500 DG F 9 O4' - C4' - C3' ANGL. DEV. = -3.2 DEGREES REMARK 500 DC F 10 C4' - C3' - C2' ANGL. DEV. = -4.3 DEGREES REMARK 500 DC F 10 C3' - C2' - C1' ANGL. DEV. = -9.9 DEGREES REMARK 500 DC F 10 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DT F 12 N3 - C4 - O4 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT F 12 C5 - C4 - O4 ANGL. DEV. = -4.4 DEGREES REMARK 500 DC G 2 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DA G 5 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DA G 6 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT G 8 O4' - C4' - C3' ANGL. DEV. = -2.6 DEGREES REMARK 500 DT G 8 C1' - O4' - C4' ANGL. DEV. = -8.8 DEGREES REMARK 500 DT G 8 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG G 9 C1' - O4' - C4' ANGL. DEV. = -6.2 DEGREES REMARK 500 DG G 11 C1' - O4' - C4' ANGL. DEV. = -7.2 DEGREES REMARK 500 DG G 11 C3' - C2' - C1' ANGL. DEV. = -6.4 DEGREES REMARK 500 DG G 11 O4' - C1' - C2' ANGL. DEV. = -4.9 DEGREES REMARK 500 DG G 11 O4' - C1' - N9 ANGL. DEV. = 6.7 DEGREES REMARK 500 DT G 12 O4' - C4' - C3' ANGL. DEV. = -3.8 DEGREES REMARK 500 DT G 12 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 DA H 1 O4' - C1' - C2' ANGL. DEV. = -6.5 DEGREES REMARK 500 DA H 1 O4' - C1' - N9 ANGL. DEV. = 7.8 DEGREES REMARK 500 DG H 3 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA H 5 O4' - C4' - C3' ANGL. DEV. = -2.5 DEGREES REMARK 500 DA H 5 C1' - O4' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 56 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 26 10.70 -64.49 REMARK 500 SER A 27 174.26 177.57 REMARK 500 LEU A 35 -81.52 -97.69 REMARK 500 THR A 48 6.16 -58.08 REMARK 500 ARG A 71 -122.93 57.59 REMARK 500 ALA A 73 -167.68 -122.10 REMARK 500 SER A 84 175.36 -58.31 REMARK 500 PRO A 112 109.81 -51.28 REMARK 500 ALA A 129 -73.02 -52.87 REMARK 500 GLN A 143 135.22 -176.58 REMARK 500 ASP A 150 -72.66 -49.11 REMARK 500 LYS A 161 -72.18 -77.65 REMARK 500 ARG A 164 119.87 -33.96 REMARK 500 LYS A 165 30.59 -94.54 REMARK 500 ASP A 170 -7.35 -52.96 REMARK 500 TYR A 183 -166.22 -73.27 REMARK 500 ALA A 184 -132.74 58.72 REMARK 500 PRO A 185 -2.31 -51.70 REMARK 500 ARG A 186 -118.36 54.36 REMARK 500 ASP A 188 57.99 -110.14 REMARK 500 GLN A 195 -8.64 -55.46 REMARK 500 VAL B 64 -52.42 -123.93 REMARK 500 ALA B 74 8.32 85.33 REMARK 500 GLU B 78 99.48 -161.98 REMARK 500 SER B 84 79.81 -69.81 REMARK 500 TYR B 93 106.60 -160.21 REMARK 500 LYS B 106 48.52 -85.59 REMARK 500 ASP B 131 46.90 32.71 REMARK 500 ASP B 142 15.74 55.66 REMARK 500 ARG B 164 118.32 -39.72 REMARK 500 SER C 29 48.17 -104.87 REMARK 500 MET C 33 -8.16 75.59 REMARK 500 THR C 34 -55.39 73.40 REMARK 500 LEU C 35 -12.38 82.16 REMARK 500 GLU C 36 -70.42 -54.14 REMARK 500 ARG C 71 -75.19 -82.57 REMARK 500 ASN C 88 38.59 -91.36 REMARK 500 ASN C 90 176.99 178.27 REMARK 500 LEU C 113 -9.20 -59.00 REMARK 500 PHE C 141 36.02 74.57 REMARK 500 GLU C 148 159.39 -48.48 REMARK 500 LYS C 161 35.56 -89.18 REMARK 500 LYS C 165 33.86 -79.52 REMARK 500 LEU C 181 106.44 -56.75 REMARK 500 LYS D 8 129.09 -36.99 REMARK 500 GLN D 11 135.76 -177.51 REMARK 500 HIS D 14 72.60 -116.75 REMARK 500 ALA D 25 78.31 -152.24 REMARK 500 SER D 27 -51.18 -125.60 REMARK 500 ASN D 30 -10.60 84.51 REMARK 500 REMARK 500 THIS ENTRY HAS 63 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR A 28 SER A 29 -148.67 REMARK 500 MET A 33 THR A 34 -34.46 REMARK 500 SER B 72 ALA B 73 -133.70 REMARK 500 ALA B 184 PRO B 185 145.34 REMARK 500 GLN D 11 PRO D 12 149.32 REMARK 500 ALA D 184 PRO D 185 113.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZP7 RELATED DB: PDB REMARK 900 1ZP7 IS AN UNCOMPLEXED STRUCTURE OF RECU. DBREF 5FDK A 1 199 UNP P39792 RECU_BACSU 1 199 DBREF 5FDK B 1 199 UNP P39792 RECU_BACSU 1 199 DBREF 5FDK C 1 199 UNP P39792 RECU_BACSU 1 199 DBREF 5FDK D 1 199 UNP P39792 RECU_BACSU 1 199 DBREF 5FDK E 1 12 PDB 5FDK 5FDK 1 12 DBREF 5FDK F 1 12 PDB 5FDK 5FDK 1 12 DBREF 5FDK G 1 12 PDB 5FDK 5FDK 1 12 DBREF 5FDK H 1 12 PDB 5FDK 5FDK 1 12 SEQADV 5FDK ASN A 88 UNP P39792 ASP 88 ENGINEERED MUTATION SEQADV 5FDK ASN B 88 UNP P39792 ASP 88 ENGINEERED MUTATION SEQADV 5FDK ASN C 88 UNP P39792 ASP 88 ENGINEERED MUTATION SEQADV 5FDK ASN D 88 UNP P39792 ASP 88 ENGINEERED MUTATION SEQRES 1 A 199 MET ILE ARG TYR PRO ASN GLY LYS THR PHE GLN PRO LYS SEQRES 2 A 199 HIS SER VAL SER SER GLN ASN SER GLN LYS ARG ALA PRO SEQRES 3 A 199 SER TYR SER ASN ARG GLY MET THR LEU GLU ASP ASP LEU SEQRES 4 A 199 ASN GLU THR ASN LYS TYR TYR LEU THR ASN GLN ILE ALA SEQRES 5 A 199 VAL ILE HIS LYS LYS PRO THR PRO VAL GLN ILE VAL ASN SEQRES 6 A 199 VAL HIS TYR PRO LYS ARG SER ALA ALA VAL ILE LYS GLU SEQRES 7 A 199 ALA TYR PHE LYS GLN SER SER THR THR ASN TYR ASN GLY SEQRES 8 A 199 ILE TYR LYS GLY ARG TYR ILE ASP PHE GLU ALA LYS GLU SEQRES 9 A 199 THR LYS ASN LYS THR SER PHE PRO LEU GLN ASN PHE HIS SEQRES 10 A 199 ASP HIS GLN ILE GLU HIS MET LYS GLN VAL LYS ALA GLN SEQRES 11 A 199 ASP GLY ILE CYS PHE VAL ILE ILE SER ALA PHE ASP GLN SEQRES 12 A 199 VAL TYR PHE LEU GLU ALA ASP LYS LEU PHE TYR PHE TRP SEQRES 13 A 199 ASP ARG LYS GLU LYS ASN GLY ARG LYS SER ILE ARG LYS SEQRES 14 A 199 ASP GLU LEU GLU GLU THR ALA TYR PRO ILE SER LEU GLY SEQRES 15 A 199 TYR ALA PRO ARG ILE ASP TYR ILE SER ILE ILE GLU GLN SEQRES 16 A 199 LEU TYR PHE SER SEQRES 1 B 199 MET ILE ARG TYR PRO ASN GLY LYS THR PHE GLN PRO LYS SEQRES 2 B 199 HIS SER VAL SER SER GLN ASN SER GLN LYS ARG ALA PRO SEQRES 3 B 199 SER TYR SER ASN ARG GLY MET THR LEU GLU ASP ASP LEU SEQRES 4 B 199 ASN GLU THR ASN LYS TYR TYR LEU THR ASN GLN ILE ALA SEQRES 5 B 199 VAL ILE HIS LYS LYS PRO THR PRO VAL GLN ILE VAL ASN SEQRES 6 B 199 VAL HIS TYR PRO LYS ARG SER ALA ALA VAL ILE LYS GLU SEQRES 7 B 199 ALA TYR PHE LYS GLN SER SER THR THR ASN TYR ASN GLY SEQRES 8 B 199 ILE TYR LYS GLY ARG TYR ILE ASP PHE GLU ALA LYS GLU SEQRES 9 B 199 THR LYS ASN LYS THR SER PHE PRO LEU GLN ASN PHE HIS SEQRES 10 B 199 ASP HIS GLN ILE GLU HIS MET LYS GLN VAL LYS ALA GLN SEQRES 11 B 199 ASP GLY ILE CYS PHE VAL ILE ILE SER ALA PHE ASP GLN SEQRES 12 B 199 VAL TYR PHE LEU GLU ALA ASP LYS LEU PHE TYR PHE TRP SEQRES 13 B 199 ASP ARG LYS GLU LYS ASN GLY ARG LYS SER ILE ARG LYS SEQRES 14 B 199 ASP GLU LEU GLU GLU THR ALA TYR PRO ILE SER LEU GLY SEQRES 15 B 199 TYR ALA PRO ARG ILE ASP TYR ILE SER ILE ILE GLU GLN SEQRES 16 B 199 LEU TYR PHE SER SEQRES 1 C 199 MET ILE ARG TYR PRO ASN GLY LYS THR PHE GLN PRO LYS SEQRES 2 C 199 HIS SER VAL SER SER GLN ASN SER GLN LYS ARG ALA PRO SEQRES 3 C 199 SER TYR SER ASN ARG GLY MET THR LEU GLU ASP ASP LEU SEQRES 4 C 199 ASN GLU THR ASN LYS TYR TYR LEU THR ASN GLN ILE ALA SEQRES 5 C 199 VAL ILE HIS LYS LYS PRO THR PRO VAL GLN ILE VAL ASN SEQRES 6 C 199 VAL HIS TYR PRO LYS ARG SER ALA ALA VAL ILE LYS GLU SEQRES 7 C 199 ALA TYR PHE LYS GLN SER SER THR THR ASN TYR ASN GLY SEQRES 8 C 199 ILE TYR LYS GLY ARG TYR ILE ASP PHE GLU ALA LYS GLU SEQRES 9 C 199 THR LYS ASN LYS THR SER PHE PRO LEU GLN ASN PHE HIS SEQRES 10 C 199 ASP HIS GLN ILE GLU HIS MET LYS GLN VAL LYS ALA GLN SEQRES 11 C 199 ASP GLY ILE CYS PHE VAL ILE ILE SER ALA PHE ASP GLN SEQRES 12 C 199 VAL TYR PHE LEU GLU ALA ASP LYS LEU PHE TYR PHE TRP SEQRES 13 C 199 ASP ARG LYS GLU LYS ASN GLY ARG LYS SER ILE ARG LYS SEQRES 14 C 199 ASP GLU LEU GLU GLU THR ALA TYR PRO ILE SER LEU GLY SEQRES 15 C 199 TYR ALA PRO ARG ILE ASP TYR ILE SER ILE ILE GLU GLN SEQRES 16 C 199 LEU TYR PHE SER SEQRES 1 D 199 MET ILE ARG TYR PRO ASN GLY LYS THR PHE GLN PRO LYS SEQRES 2 D 199 HIS SER VAL SER SER GLN ASN SER GLN LYS ARG ALA PRO SEQRES 3 D 199 SER TYR SER ASN ARG GLY MET THR LEU GLU ASP ASP LEU SEQRES 4 D 199 ASN GLU THR ASN LYS TYR TYR LEU THR ASN GLN ILE ALA SEQRES 5 D 199 VAL ILE HIS LYS LYS PRO THR PRO VAL GLN ILE VAL ASN SEQRES 6 D 199 VAL HIS TYR PRO LYS ARG SER ALA ALA VAL ILE LYS GLU SEQRES 7 D 199 ALA TYR PHE LYS GLN SER SER THR THR ASN TYR ASN GLY SEQRES 8 D 199 ILE TYR LYS GLY ARG TYR ILE ASP PHE GLU ALA LYS GLU SEQRES 9 D 199 THR LYS ASN LYS THR SER PHE PRO LEU GLN ASN PHE HIS SEQRES 10 D 199 ASP HIS GLN ILE GLU HIS MET LYS GLN VAL LYS ALA GLN SEQRES 11 D 199 ASP GLY ILE CYS PHE VAL ILE ILE SER ALA PHE ASP GLN SEQRES 12 D 199 VAL TYR PHE LEU GLU ALA ASP LYS LEU PHE TYR PHE TRP SEQRES 13 D 199 ASP ARG LYS GLU LYS ASN GLY ARG LYS SER ILE ARG LYS SEQRES 14 D 199 ASP GLU LEU GLU GLU THR ALA TYR PRO ILE SER LEU GLY SEQRES 15 D 199 TYR ALA PRO ARG ILE ASP TYR ILE SER ILE ILE GLU GLN SEQRES 16 D 199 LEU TYR PHE SER SEQRES 1 E 12 DA DC DG DC DA DA DT DT DG DC DG DT SEQRES 1 F 12 DA DC DG DC DA DA DT DT DG DC DG DT SEQRES 1 G 12 DA DC DG DC DA DA DT DT DG DC DG DT SEQRES 1 H 12 DA DC DG DC DA DA DT DT DG DC DG DT HELIX 1 AA1 LEU A 35 THR A 48 1 14 HELIX 2 AA2 GLN A 114 PHE A 116 5 3 HELIX 3 AA3 HIS A 117 GLN A 130 1 14 HELIX 4 AA4 ALA A 149 ASN A 162 1 14 HELIX 5 AA5 LYS A 169 ALA A 176 1 8 HELIX 6 AA6 TYR A 189 PHE A 198 1 10 HELIX 7 AA7 LEU B 35 ASN B 49 1 15 HELIX 8 AA8 HIS B 117 GLN B 130 1 14 HELIX 9 AA9 ALA B 149 LYS B 161 1 13 HELIX 10 AB1 LYS B 169 ALA B 176 1 8 HELIX 11 AB2 ASP B 188 SER B 199 1 12 HELIX 12 AB3 LEU C 35 ASN C 49 1 15 HELIX 13 AB4 GLN C 114 PHE C 116 5 3 HELIX 14 AB5 HIS C 117 ALA C 129 1 13 HELIX 15 AB6 GLU C 148 LYS C 161 1 14 HELIX 16 AB7 GLU C 171 ALA C 176 1 6 HELIX 17 AB8 TYR C 189 TYR C 197 1 9 HELIX 18 AB9 LEU D 35 ASN D 49 1 15 HELIX 19 AC1 PRO D 112 PHE D 116 5 5 HELIX 20 AC2 HIS D 117 GLN D 130 1 14 HELIX 21 AC3 ALA D 149 LYS D 159 1 11 HELIX 22 AC4 ARG D 168 ALA D 176 1 9 HELIX 23 AC5 ASP D 188 PHE D 198 1 11 SHEET 1 AA1 6 VAL A 53 LYS A 56 0 SHEET 2 AA1 6 TYR A 89 TYR A 93 -1 O ASN A 90 N HIS A 55 SHEET 3 AA1 6 ARG A 96 GLU A 104 -1 O ARG A 96 N TYR A 93 SHEET 4 AA1 6 ILE A 133 SER A 139 1 O ILE A 137 N GLU A 101 SHEET 5 AA1 6 VAL A 144 GLU A 148 -1 O TYR A 145 N ILE A 138 SHEET 6 AA1 6 TYR A 177 PRO A 178 -1 O TYR A 177 N PHE A 146 SHEET 1 AA2 2 VAL A 61 ASN A 65 0 SHEET 2 AA2 2 GLU A 78 PHE A 81 -1 O GLU A 78 N ASN A 65 SHEET 1 AA3 2 SER A 110 PRO A 112 0 SHEET 2 AA3 2 SER A 166 ARG A 168 -1 O ILE A 167 N PHE A 111 SHEET 1 AA4 5 VAL B 53 LYS B 56 0 SHEET 2 AA4 5 TYR B 89 TYR B 93 -1 O ASN B 90 N HIS B 55 SHEET 3 AA4 5 ARG B 96 ASP B 99 -1 O ILE B 98 N GLY B 91 SHEET 4 AA4 5 ILE B 133 ALA B 140 1 O ILE B 133 N TYR B 97 SHEET 5 AA4 5 ALA B 102 GLU B 104 1 N LYS B 103 O SER B 139 SHEET 1 AA5 6 VAL B 53 LYS B 56 0 SHEET 2 AA5 6 TYR B 89 TYR B 93 -1 O ASN B 90 N HIS B 55 SHEET 3 AA5 6 ARG B 96 ASP B 99 -1 O ILE B 98 N GLY B 91 SHEET 4 AA5 6 ILE B 133 ALA B 140 1 O ILE B 133 N TYR B 97 SHEET 5 AA5 6 GLN B 143 GLU B 148 -1 O GLN B 143 N ALA B 140 SHEET 6 AA5 6 TYR B 177 PRO B 178 -1 O TYR B 177 N PHE B 146 SHEET 1 AA6 4 ILE B 63 VAL B 66 0 SHEET 2 AA6 4 VAL B 75 ALA B 79 -1 O GLU B 78 N ASN B 65 SHEET 3 AA6 4 VAL D 75 PHE D 81 -1 O ILE D 76 N ALA B 79 SHEET 4 AA6 4 VAL D 61 HIS D 67 -1 N HIS D 67 O VAL D 75 SHEET 1 AA7 2 SER B 110 PRO B 112 0 SHEET 2 AA7 2 SER B 166 ARG B 168 -1 O ILE B 167 N PHE B 111 SHEET 1 AA8 4 VAL C 53 ILE C 54 0 SHEET 2 AA8 4 TYR C 89 TYR C 93 -1 O ILE C 92 N VAL C 53 SHEET 3 AA8 4 ARG C 96 PHE C 100 -1 O ILE C 98 N GLY C 91 SHEET 4 AA8 4 ILE C 133 CYS C 134 1 O ILE C 133 N TYR C 97 SHEET 1 AA9 2 VAL C 61 HIS C 67 0 SHEET 2 AA9 2 VAL C 75 PHE C 81 -1 O TYR C 80 N GLN C 62 SHEET 1 AB1 4 ALA C 102 LYS C 103 0 SHEET 2 AB1 4 ILE C 137 ILE C 138 1 O ILE C 137 N LYS C 103 SHEET 3 AB1 4 TYR C 145 PHE C 146 -1 O TYR C 145 N ILE C 138 SHEET 4 AB1 4 TYR C 177 PRO C 178 -1 O TYR C 177 N PHE C 146 SHEET 1 AB2 2 SER C 110 PRO C 112 0 SHEET 2 AB2 2 SER C 166 ARG C 168 -1 O ILE C 167 N PHE C 111 SHEET 1 AB3 2 SER C 180 LEU C 181 0 SHEET 2 AB3 2 ILE C 187 ASP C 188 -1 O ASP C 188 N SER C 180 SHEET 1 AB4 5 VAL D 53 LYS D 56 0 SHEET 2 AB4 5 TYR D 89 TYR D 93 -1 O ASN D 90 N HIS D 55 SHEET 3 AB4 5 ARG D 96 ASP D 99 -1 O ARG D 96 N TYR D 93 SHEET 4 AB4 5 ILE D 133 ILE D 138 1 O ILE D 133 N ASP D 99 SHEET 5 AB4 5 ALA D 102 LYS D 103 1 N LYS D 103 O ILE D 137 SHEET 1 AB5 6 VAL D 53 LYS D 56 0 SHEET 2 AB5 6 TYR D 89 TYR D 93 -1 O ASN D 90 N HIS D 55 SHEET 3 AB5 6 ARG D 96 ASP D 99 -1 O ARG D 96 N TYR D 93 SHEET 4 AB5 6 ILE D 133 ILE D 138 1 O ILE D 133 N ASP D 99 SHEET 5 AB5 6 TYR D 145 GLU D 148 -1 O TYR D 145 N ILE D 138 SHEET 6 AB5 6 TYR D 177 PRO D 178 -1 O TYR D 177 N PHE D 146 CISPEP 1 SER A 27 TYR A 28 0 5.17 CISPEP 2 ARG A 31 GLY A 32 0 -18.86 CISPEP 3 THR A 34 LEU A 35 0 -15.60 CISPEP 4 SER A 72 ALA A 73 0 1.72 CISPEP 5 TYR C 197 PHE C 198 0 0.78 CISPEP 6 SER D 15 VAL D 16 0 2.77 CISPEP 7 ARG D 24 ALA D 25 0 8.03 CISPEP 8 ARG D 31 GLY D 32 0 -11.08 CISPEP 9 TYR D 183 ALA D 184 0 -9.30 CRYST1 144.447 144.447 310.343 90.00 90.00 120.00 H 3 2 72 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006923 0.003997 0.000000 0.00000 SCALE2 0.000000 0.007994 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003222 0.00000