PDB Short entry for 5FM8 HEADER STRUCTURAL PROTEIN 02-NOV-15 5FM8 TITLE STRUCTURE OF THE C-TERMINALLY EXTENDED DOMAIN MY4 OF HUMAN MYOMESIN TITLE 2 (SPACE GROUP P65) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOMESIN-1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: MY4 EXTENDED AT ITS C-TERMINUS, UNP RESIDUES 510-618; COMPND 5 SYNONYM: 190 KDA CONNECTIN-ASSOCIATED PROTEIN, 190 KDA TITIN- COMPND 6 ASSOCIATED PROTEIN, MYOMESIN FAMILY MEMBER 1, MYOMESIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL PROTEIN, SARCOMERE, M-BAND, FIBRONECTIN DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR S.PERNIGO,R.A.STEINER REVDAT 4 10-JAN-24 5FM8 1 REMARK LINK REVDAT 3 01-MAR-17 5FM8 1 JRNL REVDAT 2 07-DEC-16 5FM8 1 JRNL REVDAT 1 23-NOV-16 5FM8 0 JRNL AUTH S.PERNIGO,A.FUKUZAWA,A.E.BEEDLE,M.HOLT,A.ROUND,A.PANDINI, JRNL AUTH 2 S.GARCIA-MANYES,M.GAUTEL,R.A.STEINER JRNL TITL BINDING OF MYOMESIN TO OBSCURIN-LIKE-1 AT THE MUSCLE M-BAND JRNL TITL 2 PROVIDES A STRATEGY FOR ISOFORM-SPECIFIC MECHANICAL JRNL TITL 3 PROTECTION. JRNL REF STRUCTURE V. 25 107 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 27989621 JRNL DOI 10.1016/J.STR.2016.11.015 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1774 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2495 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3084 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 22.92000 REMARK 3 B22 (A**2) : 22.92000 REMARK 3 B33 (A**2) : -45.84000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.034 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.030 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.655 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3235 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3081 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4412 ; 1.716 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7135 ; 1.457 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 415 ; 7.098 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;30.841 ;23.893 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 513 ;15.772 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;19.223 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 486 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3649 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 699 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1637 ; 1.074 ; 2.412 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1635 ; 1.069 ; 2.408 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2041 ; 1.689 ; 3.611 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1598 ; 0.982 ; 2.479 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.670 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.330 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 28 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 508 A 519 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9705 33.0405 -1.4716 REMARK 3 T TENSOR REMARK 3 T11: 0.0908 T22: 0.2161 REMARK 3 T33: 0.3984 T12: 0.0197 REMARK 3 T13: 0.0539 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 0.4463 L22: 7.3225 REMARK 3 L33: 4.3319 L12: 0.1678 REMARK 3 L13: 0.4828 L23: -5.0726 REMARK 3 S TENSOR REMARK 3 S11: 0.0513 S12: 0.0853 S13: -0.1210 REMARK 3 S21: -0.1270 S22: -0.2325 S23: -0.5110 REMARK 3 S31: 0.1676 S32: 0.2513 S33: 0.1812 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 520 A 527 REMARK 3 ORIGIN FOR THE GROUP (A): -19.2195 21.6065 13.7590 REMARK 3 T TENSOR REMARK 3 T11: 0.2315 T22: 0.2145 REMARK 3 T33: 0.3486 T12: -0.0314 REMARK 3 T13: -0.0130 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 1.7767 L22: 7.5236 REMARK 3 L33: 4.8501 L12: -3.2783 REMARK 3 L13: 2.9154 L23: -5.0719 REMARK 3 S TENSOR REMARK 3 S11: 0.1700 S12: 0.1846 S13: 0.1077 REMARK 3 S21: 0.2131 S22: -0.3230 S23: -0.3585 REMARK 3 S31: 0.3970 S32: 0.3219 S33: 0.1530 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 528 A 540 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2021 36.9900 -0.9410 REMARK 3 T TENSOR REMARK 3 T11: 0.5822 T22: 0.1166 REMARK 3 T33: 0.7160 T12: -0.1274 REMARK 3 T13: 0.4296 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: 1.9784 L22: 2.1392 REMARK 3 L33: 5.7462 L12: -0.9138 REMARK 3 L13: 1.7089 L23: 1.6123 REMARK 3 S TENSOR REMARK 3 S11: 0.1122 S12: 0.2697 S13: 0.1766 REMARK 3 S21: -0.5415 S22: 0.0437 S23: -0.6703 REMARK 3 S31: 0.0362 S32: 0.3940 S33: -0.1559 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 541 A 564 REMARK 3 ORIGIN FOR THE GROUP (A): -22.6035 34.9665 5.7752 REMARK 3 T TENSOR REMARK 3 T11: 0.0493 T22: 0.0908 REMARK 3 T33: 0.3020 T12: -0.0157 REMARK 3 T13: 0.0047 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 2.2583 L22: 6.5575 REMARK 3 L33: 1.3983 L12: 2.0757 REMARK 3 L13: -0.8637 L23: -0.9659 REMARK 3 S TENSOR REMARK 3 S11: 0.0938 S12: -0.2179 S13: 0.0402 REMARK 3 S21: 0.0414 S22: -0.1691 S23: 0.1442 REMARK 3 S31: 0.0663 S32: -0.0626 S33: 0.0752 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 565 A 583 REMARK 3 ORIGIN FOR THE GROUP (A): -21.3368 27.9962 9.1790 REMARK 3 T TENSOR REMARK 3 T11: 0.0676 T22: 0.1773 REMARK 3 T33: 0.4040 T12: 0.0446 REMARK 3 T13: 0.0001 T23: -0.0496 REMARK 3 L TENSOR REMARK 3 L11: 0.3891 L22: 1.7162 REMARK 3 L33: 3.1837 L12: -0.6869 REMARK 3 L13: 0.3703 L23: 0.5163 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: 0.0911 S13: 0.0843 REMARK 3 S21: 0.1132 S22: -0.0473 S23: -0.1164 REMARK 3 S31: 0.1710 S32: 0.5043 S33: 0.0956 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 584 A 590 REMARK 3 ORIGIN FOR THE GROUP (A): -15.7377 44.1642 1.0186 REMARK 3 T TENSOR REMARK 3 T11: 0.1189 T22: 0.2281 REMARK 3 T33: 0.3371 T12: 0.0014 REMARK 3 T13: 0.0158 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 0.8551 L22: 13.1358 REMARK 3 L33: 2.3526 L12: -0.0681 REMARK 3 L13: -1.2812 L23: -1.0337 REMARK 3 S TENSOR REMARK 3 S11: 0.1055 S12: -0.0075 S13: 0.1370 REMARK 3 S21: -0.1520 S22: -0.0453 S23: -0.0976 REMARK 3 S31: -0.0590 S32: 0.2482 S33: -0.0602 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 591 A 608 REMARK 3 ORIGIN FOR THE GROUP (A): -21.2671 26.6176 2.2653 REMARK 3 T TENSOR REMARK 3 T11: 0.1867 T22: 0.1560 REMARK 3 T33: 0.3486 T12: 0.0896 REMARK 3 T13: 0.0157 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 0.9481 L22: 6.8882 REMARK 3 L33: 2.7062 L12: 1.1033 REMARK 3 L13: -1.1355 L23: -0.3312 REMARK 3 S TENSOR REMARK 3 S11: -0.0481 S12: 0.1066 S13: -0.0884 REMARK 3 S21: -0.6106 S22: -0.1799 S23: -0.1408 REMARK 3 S31: 0.3311 S32: 0.0937 S33: 0.2280 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 508 B 526 REMARK 3 ORIGIN FOR THE GROUP (A): -30.9806 58.3791 6.1408 REMARK 3 T TENSOR REMARK 3 T11: 0.0943 T22: 0.1675 REMARK 3 T33: 0.3958 T12: -0.0254 REMARK 3 T13: 0.0461 T23: 0.0630 REMARK 3 L TENSOR REMARK 3 L11: 0.7716 L22: 6.5864 REMARK 3 L33: 5.9014 L12: -0.0962 REMARK 3 L13: 0.9199 L23: 4.7728 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: -0.0391 S13: 0.0480 REMARK 3 S21: -0.1824 S22: -0.2834 S23: 0.3765 REMARK 3 S31: -0.3050 S32: -0.2845 S33: 0.2146 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 527 B 550 REMARK 3 ORIGIN FOR THE GROUP (A): -32.8876 50.7732 3.3762 REMARK 3 T TENSOR REMARK 3 T11: 0.1222 T22: 0.0741 REMARK 3 T33: 0.4372 T12: 0.0548 REMARK 3 T13: -0.0288 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 4.0516 L22: 2.2138 REMARK 3 L33: 2.0052 L12: 0.8001 REMARK 3 L13: -0.8028 L23: -1.3354 REMARK 3 S TENSOR REMARK 3 S11: -0.1034 S12: 0.1521 S13: 0.0283 REMARK 3 S21: -0.2675 S22: 0.0872 S23: 0.3702 REMARK 3 S31: -0.1307 S32: -0.3272 S33: 0.0162 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 551 B 560 REMARK 3 ORIGIN FOR THE GROUP (A): -18.6702 55.4969 5.0290 REMARK 3 T TENSOR REMARK 3 T11: 0.1054 T22: 0.1357 REMARK 3 T33: 0.3482 T12: -0.0212 REMARK 3 T13: 0.0169 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 3.8078 L22: 8.2262 REMARK 3 L33: 2.7217 L12: 2.4186 REMARK 3 L13: -0.9864 L23: -2.6284 REMARK 3 S TENSOR REMARK 3 S11: -0.0745 S12: 0.4320 S13: -0.0133 REMARK 3 S21: -0.2090 S22: 0.1102 S23: -0.5170 REMARK 3 S31: 0.0087 S32: -0.1034 S33: -0.0357 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 561 B 568 REMARK 3 ORIGIN FOR THE GROUP (A): -34.1478 48.9803 11.0997 REMARK 3 T TENSOR REMARK 3 T11: 0.2430 T22: 0.2468 REMARK 3 T33: 0.3977 T12: -0.0326 REMARK 3 T13: 0.0129 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 8.6807 L22: 10.0275 REMARK 3 L33: 1.2096 L12: -8.3721 REMARK 3 L13: -1.2911 L23: -0.1559 REMARK 3 S TENSOR REMARK 3 S11: -0.0544 S12: -0.0448 S13: 0.2033 REMARK 3 S21: 0.0750 S22: 0.1549 S23: -0.0324 REMARK 3 S31: -0.0443 S32: -0.0793 S33: -0.1005 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 569 B 588 REMARK 3 ORIGIN FOR THE GROUP (A): -24.0861 57.0419 8.2054 REMARK 3 T TENSOR REMARK 3 T11: 0.2489 T22: 0.0079 REMARK 3 T33: 0.4134 T12: 0.0177 REMARK 3 T13: 0.0309 T23: 0.0448 REMARK 3 L TENSOR REMARK 3 L11: 2.1994 L22: 2.1805 REMARK 3 L33: 0.5467 L12: -0.0903 REMARK 3 L13: -0.0922 L23: -1.0701 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: -0.0562 S13: -0.1135 REMARK 3 S21: 0.1529 S22: -0.0461 S23: -0.0945 REMARK 3 S31: -0.1229 S32: 0.0276 S33: 0.0831 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 589 B 597 REMARK 3 ORIGIN FOR THE GROUP (A): -29.6488 45.5210 -2.5054 REMARK 3 T TENSOR REMARK 3 T11: 0.1132 T22: 0.2042 REMARK 3 T33: 0.3805 T12: 0.0262 REMARK 3 T13: -0.0482 T23: -0.0753 REMARK 3 L TENSOR REMARK 3 L11: 3.3071 L22: 8.9599 REMARK 3 L33: 2.9877 L12: 2.4321 REMARK 3 L13: -0.1481 L23: -4.6665 REMARK 3 S TENSOR REMARK 3 S11: -0.1956 S12: 0.4733 S13: -0.0923 REMARK 3 S21: -0.4587 S22: 0.2844 S23: 0.2215 REMARK 3 S31: 0.1397 S32: -0.0725 S33: -0.0888 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 598 B 608 REMARK 3 ORIGIN FOR THE GROUP (A): -25.2755 67.6841 8.2465 REMARK 3 T TENSOR REMARK 3 T11: 0.1335 T22: 0.1148 REMARK 3 T33: 0.4064 T12: -0.0077 REMARK 3 T13: -0.0177 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.3554 L22: 6.8317 REMARK 3 L33: 1.1858 L12: 1.7629 REMARK 3 L13: 0.2314 L23: 0.7097 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: -0.0354 S13: 0.0170 REMARK 3 S21: -0.0203 S22: -0.2597 S23: 0.2907 REMARK 3 S31: -0.1322 S32: -0.2007 S33: 0.2940 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 508 C 517 REMARK 3 ORIGIN FOR THE GROUP (A): -21.8567 25.5343 35.6859 REMARK 3 T TENSOR REMARK 3 T11: 0.2606 T22: 0.2063 REMARK 3 T33: 0.3419 T12: -0.1028 REMARK 3 T13: -0.0316 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 10.3883 L22: 5.2774 REMARK 3 L33: 6.5444 L12: -4.0263 REMARK 3 L13: -3.3130 L23: 0.8226 REMARK 3 S TENSOR REMARK 3 S11: -0.5362 S12: -0.4594 S13: -0.6085 REMARK 3 S21: 0.2755 S22: 0.2247 S23: 0.2987 REMARK 3 S31: 0.6256 S32: 0.1059 S33: 0.3116 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 518 C 534 REMARK 3 ORIGIN FOR THE GROUP (A): -14.2834 25.2409 23.9316 REMARK 3 T TENSOR REMARK 3 T11: 0.2536 T22: 0.2467 REMARK 3 T33: 0.4071 T12: -0.0636 REMARK 3 T13: 0.0347 T23: -0.0676 REMARK 3 L TENSOR REMARK 3 L11: 5.3078 L22: 2.8571 REMARK 3 L33: 7.0566 L12: 2.0268 REMARK 3 L13: -3.7127 L23: -4.1920 REMARK 3 S TENSOR REMARK 3 S11: -0.1351 S12: 0.0840 S13: -0.3307 REMARK 3 S21: 0.0361 S22: -0.0504 S23: 0.0436 REMARK 3 S31: 0.3366 S32: 0.1477 S33: 0.1855 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 535 C 541 REMARK 3 ORIGIN FOR THE GROUP (A): -32.8490 25.0450 36.2490 REMARK 3 T TENSOR REMARK 3 T11: 0.2584 T22: 0.2799 REMARK 3 T33: 0.3873 T12: -0.0325 REMARK 3 T13: 0.0315 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 3.8346 L22: 5.2815 REMARK 3 L33: 8.9762 L12: 4.4240 REMARK 3 L13: 0.0548 L23: -0.8828 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: -0.1617 S13: -0.0695 REMARK 3 S21: -0.1460 S22: -0.0825 S23: -0.0245 REMARK 3 S31: 0.0174 S32: 0.0300 S33: 0.1385 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 542 C 563 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0547 35.8762 28.4666 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.2100 REMARK 3 T33: 0.3898 T12: -0.0207 REMARK 3 T13: -0.0095 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 7.2119 L22: 2.4054 REMARK 3 L33: 2.4545 L12: 1.1920 REMARK 3 L13: -1.1676 L23: -0.1004 REMARK 3 S TENSOR REMARK 3 S11: -0.0730 S12: 0.0827 S13: 0.5651 REMARK 3 S21: -0.0712 S22: 0.0472 S23: 0.1163 REMARK 3 S31: -0.1127 S32: -0.2638 S33: 0.0258 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 564 C 568 REMARK 3 ORIGIN FOR THE GROUP (A): -24.7107 24.3571 23.3216 REMARK 3 T TENSOR REMARK 3 T11: 0.1959 T22: 0.3465 REMARK 3 T33: 0.4676 T12: -0.0681 REMARK 3 T13: -0.0647 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 0.0698 L22: 7.3228 REMARK 3 L33: 3.5153 L12: -0.5191 REMARK 3 L13: 0.2600 L23: 1.0233 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.0508 S13: -0.0068 REMARK 3 S21: -0.0873 S22: 0.1139 S23: 0.0763 REMARK 3 S31: -0.2226 S32: -0.3977 S33: -0.0951 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 569 C 588 REMARK 3 ORIGIN FOR THE GROUP (A): -13.8176 33.5604 26.1475 REMARK 3 T TENSOR REMARK 3 T11: 0.1187 T22: 0.2226 REMARK 3 T33: 0.4300 T12: -0.0197 REMARK 3 T13: -0.0275 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 5.1685 L22: 2.4214 REMARK 3 L33: 2.6318 L12: 3.2111 REMARK 3 L13: -3.3459 L23: -1.9794 REMARK 3 S TENSOR REMARK 3 S11: -0.0949 S12: 0.3831 S13: 0.4482 REMARK 3 S21: 0.0774 S22: 0.1178 S23: 0.2153 REMARK 3 S31: 0.2265 S32: -0.3008 S33: -0.0229 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 589 C 608 REMARK 3 ORIGIN FOR THE GROUP (A): -14.9732 29.8717 30.7963 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.1242 REMARK 3 T33: 0.3750 T12: -0.0809 REMARK 3 T13: -0.0367 T23: -0.0839 REMARK 3 L TENSOR REMARK 3 L11: 7.6311 L22: 1.4843 REMARK 3 L33: 3.0850 L12: -0.6779 REMARK 3 L13: -4.0315 L23: -0.5110 REMARK 3 S TENSOR REMARK 3 S11: -0.1301 S12: -0.1430 S13: -0.1347 REMARK 3 S21: 0.1192 S22: -0.0626 S23: 0.1460 REMARK 3 S31: 0.0987 S32: 0.0198 S33: 0.1927 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 508 D 517 REMARK 3 ORIGIN FOR THE GROUP (A): -24.6964 59.5860 37.2133 REMARK 3 T TENSOR REMARK 3 T11: 0.3208 T22: 0.3371 REMARK 3 T33: 0.4731 T12: -0.0517 REMARK 3 T13: -0.0084 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 6.0201 L22: 3.1367 REMARK 3 L33: 4.1800 L12: -2.9490 REMARK 3 L13: 1.6361 L23: -1.8822 REMARK 3 S TENSOR REMARK 3 S11: -0.5172 S12: -0.2630 S13: 0.4171 REMARK 3 S21: 0.5948 S22: 0.2195 S23: -0.2322 REMARK 3 S31: -0.3206 S32: 0.0592 S33: 0.2976 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 518 D 534 REMARK 3 ORIGIN FOR THE GROUP (A): -32.4440 60.1822 25.6745 REMARK 3 T TENSOR REMARK 3 T11: 0.2591 T22: 0.2205 REMARK 3 T33: 0.4090 T12: -0.0489 REMARK 3 T13: 0.0037 T23: 0.0499 REMARK 3 L TENSOR REMARK 3 L11: 8.4033 L22: 1.9074 REMARK 3 L33: 1.9159 L12: 1.2312 REMARK 3 L13: 3.5268 L23: 1.2283 REMARK 3 S TENSOR REMARK 3 S11: -0.2444 S12: 0.0134 S13: 0.3561 REMARK 3 S21: -0.0097 S22: 0.0618 S23: -0.0842 REMARK 3 S31: -0.2628 S32: 0.0457 S33: 0.1825 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 535 D 556 REMARK 3 ORIGIN FOR THE GROUP (A): -25.6328 52.6356 32.7211 REMARK 3 T TENSOR REMARK 3 T11: 0.2266 T22: 0.3050 REMARK 3 T33: 0.5021 T12: -0.0390 REMARK 3 T13: -0.0069 T23: 0.0556 REMARK 3 L TENSOR REMARK 3 L11: 5.3056 L22: 2.3902 REMARK 3 L33: 2.2754 L12: 0.6231 REMARK 3 L13: 2.2916 L23: 0.7113 REMARK 3 S TENSOR REMARK 3 S11: 0.1633 S12: -0.2864 S13: -0.3488 REMARK 3 S21: 0.1974 S22: -0.0138 S23: -0.3199 REMARK 3 S31: -0.0449 S32: 0.3012 S33: -0.1496 REMARK 3 REMARK 3 TLS GROUP : 25 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 557 D 563 REMARK 3 ORIGIN FOR THE GROUP (A): -22.9807 49.1482 25.5955 REMARK 3 T TENSOR REMARK 3 T11: 0.2810 T22: 0.5240 REMARK 3 T33: 0.6195 T12: -0.0301 REMARK 3 T13: 0.0236 T23: -0.0726 REMARK 3 L TENSOR REMARK 3 L11: 1.5156 L22: 8.6604 REMARK 3 L33: 5.0502 L12: -3.6217 REMARK 3 L13: 2.7642 L23: -6.6115 REMARK 3 S TENSOR REMARK 3 S11: 0.0961 S12: 0.1301 S13: 0.0770 REMARK 3 S21: -0.2003 S22: -0.3028 S23: -0.2417 REMARK 3 S31: 0.1617 S32: 0.2741 S33: 0.2067 REMARK 3 REMARK 3 TLS GROUP : 26 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 564 D 568 REMARK 3 ORIGIN FOR THE GROUP (A): -22.1138 61.3025 24.3509 REMARK 3 T TENSOR REMARK 3 T11: 0.4381 T22: 0.4691 REMARK 3 T33: 0.6483 T12: 0.0224 REMARK 3 T13: -0.0261 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 1.7388 L22: 10.0893 REMARK 3 L33: 3.1006 L12: -4.1814 REMARK 3 L13: 2.3148 L23: -5.5913 REMARK 3 S TENSOR REMARK 3 S11: -0.2335 S12: -0.0950 S13: 0.1261 REMARK 3 S21: 0.4042 S22: 0.1484 S23: -0.2359 REMARK 3 S31: -0.2021 S32: -0.1053 S33: 0.0851 REMARK 3 REMARK 3 TLS GROUP : 27 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 569 D 593 REMARK 3 ORIGIN FOR THE GROUP (A): -28.8802 51.8270 28.8284 REMARK 3 T TENSOR REMARK 3 T11: 0.1834 T22: 0.3115 REMARK 3 T33: 0.5780 T12: -0.0940 REMARK 3 T13: -0.0049 T23: 0.0840 REMARK 3 L TENSOR REMARK 3 L11: 5.0148 L22: 1.8792 REMARK 3 L33: 1.1311 L12: 1.5315 REMARK 3 L13: 0.0334 L23: 1.1693 REMARK 3 S TENSOR REMARK 3 S11: 0.0133 S12: -0.0151 S13: -0.7704 REMARK 3 S21: 0.1981 S22: 0.1409 S23: -0.4878 REMARK 3 S31: 0.0083 S32: 0.3082 S33: -0.1542 REMARK 3 REMARK 3 TLS GROUP : 28 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 594 D 608 REMARK 3 ORIGIN FOR THE GROUP (A): -37.4157 55.9513 30.9669 REMARK 3 T TENSOR REMARK 3 T11: 0.2100 T22: 0.1610 REMARK 3 T33: 0.3715 T12: -0.0511 REMARK 3 T13: 0.0455 T23: 0.0378 REMARK 3 L TENSOR REMARK 3 L11: 7.3905 L22: 2.1426 REMARK 3 L33: 8.2883 L12: 0.8331 REMARK 3 L13: 5.7489 L23: 1.2114 REMARK 3 S TENSOR REMARK 3 S11: -0.1495 S12: -0.3196 S13: 0.1269 REMARK 3 S21: 0.2752 S22: -0.1601 S23: -0.1774 REMARK 3 S31: -0.5083 S32: -0.1716 S33: 0.3096 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 5FM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1290065430. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35371 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 84.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 20.00 REMARK 200 R MERGE FOR SHELL (I) : 1.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 5FM5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21 % (W/V) PEG 2000 MME, 10 MM NICL2, REMARK 280 100 MM TRIS/HCL PH 8.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.76667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.38333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.07500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.69167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 88.45833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 507 REMARK 465 GLU A 609 REMARK 465 LYS A 610 REMARK 465 ALA A 611 REMARK 465 ARG A 612 REMARK 465 LEU A 613 REMARK 465 LYS A 614 REMARK 465 SER A 615 REMARK 465 ARG A 616 REMARK 465 PRO A 617 REMARK 465 SER A 618 REMARK 465 GLY B 507 REMARK 465 GLU B 609 REMARK 465 LYS B 610 REMARK 465 ALA B 611 REMARK 465 ARG B 612 REMARK 465 LEU B 613 REMARK 465 LYS B 614 REMARK 465 SER B 615 REMARK 465 ARG B 616 REMARK 465 PRO B 617 REMARK 465 SER B 618 REMARK 465 GLY C 507 REMARK 465 GLU C 609 REMARK 465 LYS C 610 REMARK 465 ALA C 611 REMARK 465 ARG C 612 REMARK 465 LEU C 613 REMARK 465 LYS C 614 REMARK 465 SER C 615 REMARK 465 ARG C 616 REMARK 465 PRO C 617 REMARK 465 SER C 618 REMARK 465 GLY D 507 REMARK 465 GLU D 609 REMARK 465 LYS D 610 REMARK 465 ALA D 611 REMARK 465 ARG D 612 REMARK 465 LEU D 613 REMARK 465 LYS D 614 REMARK 465 SER D 615 REMARK 465 ARG D 616 REMARK 465 PRO D 617 REMARK 465 SER D 618 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 539 O HOH B 2017 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 553 CB - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 THR A 553 N - CA - C ANGL. DEV. = -19.1 DEGREES REMARK 500 ARG A 585 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 585 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 585 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 585 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 LEU C 542 CB - CG - CD2 ANGL. DEV. = 11.9 DEGREES REMARK 500 ARG C 585 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 585 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG D 585 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG D 585 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 568 87.02 -151.43 REMARK 500 THR A 572 -169.23 -122.85 REMARK 500 GLU B 520 136.84 -170.23 REMARK 500 THR B 572 -167.77 -121.15 REMARK 500 LYS C 565 -179.16 -67.43 REMARK 500 THR C 572 -169.80 -121.98 REMARK 500 ARG D 568 89.70 -150.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI C1610 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 508 OG REMARK 620 2 SER C 508 OG 121.1 REMARK 620 3 HOH C2002 O 86.9 68.5 REMARK 620 4 HOH C2020 O 89.6 145.8 101.5 REMARK 620 5 HOH C2021 O 87.6 110.1 172.3 83.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B1609 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 508 OG REMARK 620 2 HOH B2001 O 81.5 REMARK 620 3 HOH B2002 O 88.7 79.1 REMARK 620 4 HOH B2003 O 107.2 146.0 68.6 REMARK 620 5 HOH B2047 O 102.5 73.1 147.9 133.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS C 1609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 1609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI C 1610 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FM4 RELATED DB: PDB REMARK 900 STRUCTURE OF THE C-TERMINALLY EXTENDED DOMAIN MY4 OF HUMAN MYOMESIN REMARK 900 (SPACE GROUP P21) REMARK 900 RELATED ID: 5FM5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MYOMESIN:OBSCURIN-LIKE-1 COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 FIRST THREE N-TERMINAL RESIDUES ARE DERIVED FROM THE REMARK 999 CLONING STRATEGY DBREF 5FM8 A 510 618 UNP P52179 MYOM1_HUMAN 510 618 DBREF 5FM8 B 510 618 UNP P52179 MYOM1_HUMAN 510 618 DBREF 5FM8 C 510 618 UNP P52179 MYOM1_HUMAN 510 618 DBREF 5FM8 D 510 618 UNP P52179 MYOM1_HUMAN 510 618 SEQADV 5FM8 GLY A 507 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 SER A 508 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 THR A 509 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 GLY B 507 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 SER B 508 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 THR B 509 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 GLY C 507 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 SER C 508 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 THR C 509 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 GLY D 507 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 SER D 508 UNP P52179 CLONING ARTIFACT SEQADV 5FM8 THR D 509 UNP P52179 CLONING ARTIFACT SEQRES 1 A 112 GLY SER THR PRO ALA ALA PRO LEU ASP VAL LYS CYS LEU SEQRES 2 A 112 GLU ALA ASN LYS ASP TYR ILE ILE ILE SER TRP LYS GLN SEQRES 3 A 112 PRO ALA VAL ASP GLY GLY SER PRO ILE LEU GLY TYR PHE SEQRES 4 A 112 ILE ASP LYS CYS GLU VAL GLY THR ASP SER TRP SER GLN SEQRES 5 A 112 CYS ASN ASP THR PRO VAL LYS PHE ALA ARG PHE PRO VAL SEQRES 6 A 112 THR GLY LEU ILE GLU GLY ARG SER TYR ILE PHE ARG VAL SEQRES 7 A 112 ARG ALA VAL ASN LYS MET GLY ILE GLY PHE PRO SER ARG SEQRES 8 A 112 VAL SER GLU PRO VAL ALA ALA LEU ASP PRO ALA GLU LYS SEQRES 9 A 112 ALA ARG LEU LYS SER ARG PRO SER SEQRES 1 B 112 GLY SER THR PRO ALA ALA PRO LEU ASP VAL LYS CYS LEU SEQRES 2 B 112 GLU ALA ASN LYS ASP TYR ILE ILE ILE SER TRP LYS GLN SEQRES 3 B 112 PRO ALA VAL ASP GLY GLY SER PRO ILE LEU GLY TYR PHE SEQRES 4 B 112 ILE ASP LYS CYS GLU VAL GLY THR ASP SER TRP SER GLN SEQRES 5 B 112 CYS ASN ASP THR PRO VAL LYS PHE ALA ARG PHE PRO VAL SEQRES 6 B 112 THR GLY LEU ILE GLU GLY ARG SER TYR ILE PHE ARG VAL SEQRES 7 B 112 ARG ALA VAL ASN LYS MET GLY ILE GLY PHE PRO SER ARG SEQRES 8 B 112 VAL SER GLU PRO VAL ALA ALA LEU ASP PRO ALA GLU LYS SEQRES 9 B 112 ALA ARG LEU LYS SER ARG PRO SER SEQRES 1 C 112 GLY SER THR PRO ALA ALA PRO LEU ASP VAL LYS CYS LEU SEQRES 2 C 112 GLU ALA ASN LYS ASP TYR ILE ILE ILE SER TRP LYS GLN SEQRES 3 C 112 PRO ALA VAL ASP GLY GLY SER PRO ILE LEU GLY TYR PHE SEQRES 4 C 112 ILE ASP LYS CYS GLU VAL GLY THR ASP SER TRP SER GLN SEQRES 5 C 112 CYS ASN ASP THR PRO VAL LYS PHE ALA ARG PHE PRO VAL SEQRES 6 C 112 THR GLY LEU ILE GLU GLY ARG SER TYR ILE PHE ARG VAL SEQRES 7 C 112 ARG ALA VAL ASN LYS MET GLY ILE GLY PHE PRO SER ARG SEQRES 8 C 112 VAL SER GLU PRO VAL ALA ALA LEU ASP PRO ALA GLU LYS SEQRES 9 C 112 ALA ARG LEU LYS SER ARG PRO SER SEQRES 1 D 112 GLY SER THR PRO ALA ALA PRO LEU ASP VAL LYS CYS LEU SEQRES 2 D 112 GLU ALA ASN LYS ASP TYR ILE ILE ILE SER TRP LYS GLN SEQRES 3 D 112 PRO ALA VAL ASP GLY GLY SER PRO ILE LEU GLY TYR PHE SEQRES 4 D 112 ILE ASP LYS CYS GLU VAL GLY THR ASP SER TRP SER GLN SEQRES 5 D 112 CYS ASN ASP THR PRO VAL LYS PHE ALA ARG PHE PRO VAL SEQRES 6 D 112 THR GLY LEU ILE GLU GLY ARG SER TYR ILE PHE ARG VAL SEQRES 7 D 112 ARG ALA VAL ASN LYS MET GLY ILE GLY PHE PRO SER ARG SEQRES 8 D 112 VAL SER GLU PRO VAL ALA ALA LEU ASP PRO ALA GLU LYS SEQRES 9 D 112 ALA ARG LEU LYS SER ARG PRO SER HET NI B1609 1 HET TRS C1609 8 HET NI C1610 1 HETNAM NI NICKEL (II) ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 5 NI 2(NI 2+) FORMUL 6 TRS C4 H12 N O3 1+ FORMUL 8 HOH *140(H2 O) SHEET 1 AA 3 LEU A 514 ALA A 521 0 SHEET 2 AA 3 ILE A 526 LYS A 531 -1 O ILE A 527 N LEU A 519 SHEET 3 AA 3 ARG A 568 VAL A 571 -1 O PHE A 569 N ILE A 528 SHEET 1 AB 4 TRP A 556 GLN A 558 0 SHEET 2 AB 4 GLY A 543 GLU A 550 -1 O LYS A 548 N SER A 557 SHEET 3 AB 4 SER A 579 ASN A 588 -1 O ILE A 581 N CYS A 549 SHEET 4 AB 4 GLY A 591 ILE A 592 -1 O GLY A 591 N ASN A 588 SHEET 1 AC 4 TRP A 556 GLN A 558 0 SHEET 2 AC 4 GLY A 543 GLU A 550 -1 O LYS A 548 N SER A 557 SHEET 3 AC 4 SER A 579 ASN A 588 -1 O ILE A 581 N CYS A 549 SHEET 4 AC 4 VAL A 602 ALA A 603 -1 O VAL A 602 N TYR A 580 SHEET 1 AD 2 GLY A 591 ILE A 592 0 SHEET 2 AD 2 SER A 579 ASN A 588 -1 O ASN A 588 N GLY A 591 SHEET 1 BA 3 LEU B 514 ALA B 521 0 SHEET 2 BA 3 ILE B 526 LYS B 531 -1 O ILE B 527 N LEU B 519 SHEET 3 BA 3 ARG B 568 VAL B 571 -1 O PHE B 569 N ILE B 528 SHEET 1 BB 4 TRP B 556 GLN B 558 0 SHEET 2 BB 4 GLY B 543 GLU B 550 -1 O LYS B 548 N SER B 557 SHEET 3 BB 4 SER B 579 ASN B 588 -1 O ILE B 581 N CYS B 549 SHEET 4 BB 4 GLY B 591 ILE B 592 -1 O GLY B 591 N ASN B 588 SHEET 1 BC 4 TRP B 556 GLN B 558 0 SHEET 2 BC 4 GLY B 543 GLU B 550 -1 O LYS B 548 N SER B 557 SHEET 3 BC 4 SER B 579 ASN B 588 -1 O ILE B 581 N CYS B 549 SHEET 4 BC 4 VAL B 602 ALA B 603 -1 O VAL B 602 N TYR B 580 SHEET 1 BD 2 GLY B 591 ILE B 592 0 SHEET 2 BD 2 SER B 579 ASN B 588 -1 O ASN B 588 N GLY B 591 SHEET 1 CA 3 LEU C 514 ALA C 521 0 SHEET 2 CA 3 ILE C 526 LYS C 531 -1 O ILE C 527 N LEU C 519 SHEET 3 CA 3 PHE C 569 VAL C 571 -1 O PHE C 569 N ILE C 528 SHEET 1 CB 4 TRP C 556 GLN C 558 0 SHEET 2 CB 4 GLY C 543 GLU C 550 -1 O LYS C 548 N SER C 557 SHEET 3 CB 4 SER C 579 ASN C 588 -1 O ILE C 581 N CYS C 549 SHEET 4 CB 4 GLY C 591 ILE C 592 -1 O GLY C 591 N ASN C 588 SHEET 1 CC 4 TRP C 556 GLN C 558 0 SHEET 2 CC 4 GLY C 543 GLU C 550 -1 O LYS C 548 N SER C 557 SHEET 3 CC 4 SER C 579 ASN C 588 -1 O ILE C 581 N CYS C 549 SHEET 4 CC 4 VAL C 602 ALA C 603 -1 O VAL C 602 N TYR C 580 SHEET 1 CD 2 GLY C 591 ILE C 592 0 SHEET 2 CD 2 SER C 579 ASN C 588 -1 O ASN C 588 N GLY C 591 SHEET 1 DA 3 LEU D 514 ALA D 521 0 SHEET 2 DA 3 ILE D 526 LYS D 531 -1 O ILE D 527 N LEU D 519 SHEET 3 DA 3 ARG D 568 VAL D 571 -1 O PHE D 569 N ILE D 528 SHEET 1 DB 4 TRP D 556 GLN D 558 0 SHEET 2 DB 4 GLY D 543 GLU D 550 -1 O LYS D 548 N SER D 557 SHEET 3 DB 4 SER D 579 ASN D 588 -1 O ILE D 581 N CYS D 549 SHEET 4 DB 4 GLY D 591 ILE D 592 -1 O GLY D 591 N ASN D 588 SHEET 1 DC 4 TRP D 556 GLN D 558 0 SHEET 2 DC 4 GLY D 543 GLU D 550 -1 O LYS D 548 N SER D 557 SHEET 3 DC 4 SER D 579 ASN D 588 -1 O ILE D 581 N CYS D 549 SHEET 4 DC 4 VAL D 602 ALA D 603 -1 O VAL D 602 N TYR D 580 SHEET 1 DD 2 GLY D 591 ILE D 592 0 SHEET 2 DD 2 SER D 579 ASN D 588 -1 O ASN D 588 N GLY D 591 LINK OG SER A 508 NI NI C1610 4565 1555 2.36 LINK OG SER B 508 NI NI B1609 1555 1555 2.45 LINK NI NI B1609 O HOH B2001 1555 1555 2.08 LINK NI NI B1609 O HOH B2002 1555 1555 2.61 LINK NI NI B1609 O HOH B2003 1555 1555 1.93 LINK NI NI B1609 O HOH B2047 1555 1555 2.30 LINK OG ASER C 508 NI NI C1610 1555 1555 2.66 LINK NI NI C1610 O HOH C2002 1555 1555 1.78 LINK NI NI C1610 O HOH C2020 1555 1555 2.13 LINK NI NI C1610 O HOH C2021 1555 1555 1.81 SITE 1 AC1 4 ASP A 561 ASP B 561 ASP C 561 ASP D 561 SITE 1 AC2 5 SER B 508 HOH B2001 HOH B2002 HOH B2003 SITE 2 AC2 5 HOH B2047 SITE 1 AC3 5 SER A 508 SER C 508 HOH C2002 HOH C2020 SITE 2 AC3 5 HOH C2021 CRYST1 97.410 97.410 106.150 90.00 90.00 120.00 P 65 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010266 0.005927 0.000000 0.00000 SCALE2 0.000000 0.011854 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009421 0.00000