PDB Short entry for 5GPY HEADER TRANSCRIPTION 05-AUG-16 5GPY TITLE CRYSTAL STRUCTURE OF THE HUMAN TFIIE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-217; COMPND 5 SYNONYM: GENERAL TRANSCRIPTION FACTOR IIE 56 KDA SUBUNIT, COMPND 6 TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA,TFIIE-ALPHA; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 141-244; COMPND 12 SYNONYM: TFIIE-BETA,GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 2; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GTF2E1, TF2E1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: GTF2E2, TF2E2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GENERAL TRANSCRIPTION FACTOR, RNA POLYMERASE II, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR T.OBITA,K.MIWA,R.KOJIMA,Y.OHKUMA,Y.TAMURA,M.MIZUGUCHI REVDAT 3 20-MAR-24 5GPY 1 REMARK REVDAT 2 26-FEB-20 5GPY 1 JRNL REMARK REVDAT 1 02-NOV-16 5GPY 0 JRNL AUTH K.MIWA,R.KOJIMA,T.OBITA,Y.OHKUMA,Y.TAMURA,M.MIZUGUCHI JRNL TITL CRYSTAL STRUCTURE OF HUMAN GENERAL TRANSCRIPTION FACTOR JRNL TITL 2 TFIIE AT ATOMIC RESOLUTION JRNL REF J.MOL.BIOL. V. 428 4258 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 27639436 JRNL DOI 10.1016/J.JMB.2016.09.008 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 1291 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3326 - 4.3667 0.99 2768 154 0.1716 0.1951 REMARK 3 2 4.3667 - 3.4665 1.00 2665 142 0.1654 0.1985 REMARK 3 3 3.4665 - 3.0285 1.00 2654 137 0.2026 0.2514 REMARK 3 4 3.0285 - 2.7516 1.00 2650 132 0.2271 0.3106 REMARK 3 5 2.7516 - 2.5544 1.00 2592 155 0.2198 0.2471 REMARK 3 6 2.5544 - 2.4039 1.00 2604 144 0.2328 0.2801 REMARK 3 7 2.4039 - 2.2835 1.00 2605 138 0.2555 0.2980 REMARK 3 8 2.2835 - 2.1841 1.00 2569 139 0.2742 0.3663 REMARK 3 9 2.1841 - 2.1000 1.00 2572 150 0.2942 0.3080 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2324 REMARK 3 ANGLE : 1.006 3118 REMARK 3 CHIRALITY : 0.040 346 REMARK 3 PLANARITY : 0.004 403 REMARK 3 DIHEDRAL : 14.382 903 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8045 21.2399 17.8983 REMARK 3 T TENSOR REMARK 3 T11: 0.2166 T22: 0.2975 REMARK 3 T33: 0.2379 T12: -0.0030 REMARK 3 T13: -0.0090 T23: -0.0489 REMARK 3 L TENSOR REMARK 3 L11: 2.4652 L22: 4.2505 REMARK 3 L33: 9.3211 L12: 0.1146 REMARK 3 L13: 0.1443 L23: -2.2352 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: -0.2642 S13: 0.1423 REMARK 3 S21: 0.0588 S22: 0.0599 S23: -0.1384 REMARK 3 S31: -0.0999 S32: -0.0117 S33: -0.0662 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.1898 33.4169 17.6306 REMARK 3 T TENSOR REMARK 3 T11: 0.4889 T22: 0.5289 REMARK 3 T33: 0.3314 T12: -0.0919 REMARK 3 T13: 0.0157 T23: -0.0832 REMARK 3 L TENSOR REMARK 3 L11: 1.9727 L22: 8.4881 REMARK 3 L33: 3.5074 L12: 3.9123 REMARK 3 L13: -2.3691 L23: -5.2459 REMARK 3 S TENSOR REMARK 3 S11: 0.0373 S12: 0.0824 S13: -0.0177 REMARK 3 S21: 0.0406 S22: 0.0610 S23: 0.0112 REMARK 3 S31: -0.2195 S32: 0.1952 S33: -0.0597 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7573 14.5461 41.2720 REMARK 3 T TENSOR REMARK 3 T11: 0.5699 T22: 0.4284 REMARK 3 T33: 0.2867 T12: 0.0540 REMARK 3 T13: -0.0683 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 7.5140 L22: 3.0269 REMARK 3 L33: 4.6067 L12: 1.4849 REMARK 3 L13: -1.6719 L23: -0.5231 REMARK 3 S TENSOR REMARK 3 S11: -0.0400 S12: -0.4147 S13: -0.1058 REMARK 3 S21: 0.3485 S22: -0.1298 S23: 0.1100 REMARK 3 S31: -0.0969 S32: -0.1185 S33: 0.1624 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7340 9.1435 61.0901 REMARK 3 T TENSOR REMARK 3 T11: 0.8064 T22: 0.8248 REMARK 3 T33: 0.4608 T12: -0.0796 REMARK 3 T13: 0.1011 T23: -0.1946 REMARK 3 L TENSOR REMARK 3 L11: 8.5307 L22: 3.2026 REMARK 3 L33: 3.5889 L12: 0.4014 REMARK 3 L13: -3.5206 L23: -2.7956 REMARK 3 S TENSOR REMARK 3 S11: -0.1970 S12: 1.1983 S13: -1.0237 REMARK 3 S21: -0.4611 S22: -0.2517 S23: -0.1967 REMARK 3 S31: 1.0922 S32: -0.0874 S33: 0.4879 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9049 5.3445 64.2788 REMARK 3 T TENSOR REMARK 3 T11: 0.8916 T22: 0.7088 REMARK 3 T33: 0.6544 T12: -0.3085 REMARK 3 T13: 0.0796 T23: -0.1789 REMARK 3 L TENSOR REMARK 3 L11: 8.4173 L22: 5.1910 REMARK 3 L33: 2.9228 L12: -3.8150 REMARK 3 L13: -2.1709 L23: 3.8778 REMARK 3 S TENSOR REMARK 3 S11: -0.2732 S12: 0.2201 S13: -0.9822 REMARK 3 S21: 0.4801 S22: -0.4210 S23: 1.5528 REMARK 3 S31: 1.3782 S32: -1.4551 S33: 0.6991 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4333 5.5133 34.5046 REMARK 3 T TENSOR REMARK 3 T11: 0.6264 T22: 0.4367 REMARK 3 T33: 0.3589 T12: 0.1036 REMARK 3 T13: 0.0229 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 3.8069 L22: 3.1785 REMARK 3 L33: 9.2612 L12: -1.7484 REMARK 3 L13: -5.7789 L23: 1.5585 REMARK 3 S TENSOR REMARK 3 S11: -0.5420 S12: -0.7067 S13: -0.8012 REMARK 3 S21: 0.0051 S22: 0.2765 S23: -0.1905 REMARK 3 S31: 1.1920 S32: 0.8121 S33: 0.3152 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 142 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2502 13.1668 -1.4326 REMARK 3 T TENSOR REMARK 3 T11: 0.2701 T22: 0.4214 REMARK 3 T33: 0.2341 T12: -0.0092 REMARK 3 T13: 0.0649 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 7.6930 L22: 5.9101 REMARK 3 L33: 7.3255 L12: 2.9955 REMARK 3 L13: 4.7670 L23: 2.0826 REMARK 3 S TENSOR REMARK 3 S11: -0.1434 S12: 0.7243 S13: -0.1163 REMARK 3 S21: -0.4317 S22: 0.2881 S23: -0.2037 REMARK 3 S31: 0.0361 S32: -0.0116 S33: -0.1590 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4817 12.8090 10.4925 REMARK 3 T TENSOR REMARK 3 T11: 0.2747 T22: 0.5510 REMARK 3 T33: 0.3521 T12: -0.0184 REMARK 3 T13: 0.0315 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 0.7533 L22: 2.8331 REMARK 3 L33: 7.4716 L12: 1.6223 REMARK 3 L13: 0.1500 L23: -0.1296 REMARK 3 S TENSOR REMARK 3 S11: 0.1136 S12: -0.2458 S13: -0.0397 REMARK 3 S21: 0.1505 S22: -0.0440 S23: 0.1438 REMARK 3 S31: 0.3858 S32: -0.6410 S33: -0.0797 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 214 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.6769 20.5833 38.4303 REMARK 3 T TENSOR REMARK 3 T11: 0.5655 T22: 0.4684 REMARK 3 T33: 0.3372 T12: 0.0445 REMARK 3 T13: 0.0066 T23: -0.0379 REMARK 3 L TENSOR REMARK 3 L11: 7.9677 L22: 4.9304 REMARK 3 L33: 4.1041 L12: 1.0028 REMARK 3 L13: -0.8903 L23: -0.9528 REMARK 3 S TENSOR REMARK 3 S11: -0.0640 S12: -0.1419 S13: 0.2481 REMARK 3 S21: 0.2740 S22: 0.1896 S23: -0.4030 REMARK 3 S31: -0.7542 S32: 0.3984 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SF FILE CONTAINS FRIEDEL PAIRS UNDER REMARK 3 I/F_MINUS AND I/F_PLUS COLUMNS. REMARK 4 REMARK 4 5GPY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1300001263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.282446 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24970 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 59.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.75200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG3350, PH 8.9, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.76000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.26500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.26500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.76000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 5 REMARK 465 VAL A 6 REMARK 465 LEU A 7 REMARK 465 THR A 8 REMARK 465 GLU A 9 REMARK 465 GLU A 165 REMARK 465 SER A 166 REMARK 465 ALA A 167 REMARK 465 MET A 168 REMARK 465 PRO A 169 REMARK 465 LYS A 170 REMARK 465 LYS A 171 REMARK 465 ASP A 172 REMARK 465 ALA A 173 REMARK 465 ARG A 174 REMARK 465 VAL A 197 REMARK 465 ASN A 198 REMARK 465 LEU A 199 REMARK 465 ALA A 200 REMARK 465 TYR A 201 REMARK 465 GLU A 202 REMARK 465 ILE A 203 REMARK 465 LEU A 204 REMARK 465 GLU A 205 REMARK 465 PRO A 206 REMARK 465 GLU A 207 REMARK 465 PRO A 208 REMARK 465 THR A 209 REMARK 465 GLU A 210 REMARK 465 ILE A 211 REMARK 465 PRO A 212 REMARK 465 ALA A 213 REMARK 465 LEU A 214 REMARK 465 LYS A 215 REMARK 465 GLN A 216 REMARK 465 SER A 217 REMARK 465 GLY B 137 REMARK 465 SER B 138 REMARK 465 HIS B 139 REMARK 465 MET B 140 REMARK 465 PRO B 141 REMARK 465 SER B 243 REMARK 465 SER B 244 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 131 -65.89 -97.02 REMARK 500 GLU A 195 5.87 -64.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 129 SG REMARK 620 2 CYS A 132 SG 110.4 REMARK 620 3 CYS A 154 SG 117.6 104.3 REMARK 620 4 CYS A 157 SG 87.5 125.2 112.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 DBREF 5GPY A 1 217 UNP P29083 T2EA_HUMAN 1 217 DBREF 5GPY B 141 244 UNP P29084 T2EB_HUMAN 141 244 SEQADV 5GPY GLY A -2 UNP P29083 EXPRESSION TAG SEQADV 5GPY SER A -1 UNP P29083 EXPRESSION TAG SEQADV 5GPY HIS A 0 UNP P29083 EXPRESSION TAG SEQADV 5GPY GLY B 137 UNP P29084 EXPRESSION TAG SEQADV 5GPY SER B 138 UNP P29084 EXPRESSION TAG SEQADV 5GPY HIS B 139 UNP P29084 EXPRESSION TAG SEQADV 5GPY MET B 140 UNP P29084 EXPRESSION TAG SEQRES 1 A 220 GLY SER HIS MET ALA ASP PRO ASP VAL LEU THR GLU VAL SEQRES 2 A 220 PRO ALA ALA LEU LYS ARG LEU ALA LYS TYR VAL ILE ARG SEQRES 3 A 220 GLY PHE TYR GLY ILE GLU HIS ALA LEU ALA LEU ASP ILE SEQRES 4 A 220 LEU ILE ARG ASN SER CYS VAL LYS GLU GLU ASP MET LEU SEQRES 5 A 220 GLU LEU LEU LYS PHE ASP ARG LYS GLN LEU ARG SER VAL SEQRES 6 A 220 LEU ASN ASN LEU LYS GLY ASP LYS PHE ILE LYS CYS ARG SEQRES 7 A 220 MET ARG VAL GLU THR ALA ALA ASP GLY LYS THR THR ARG SEQRES 8 A 220 HIS ASN TYR TYR PHE ILE ASN TYR ARG THR LEU VAL ASN SEQRES 9 A 220 VAL VAL LYS TYR LYS LEU ASP HIS MET ARG ARG ARG ILE SEQRES 10 A 220 GLU THR ASP GLU ARG ASP SER THR ASN ARG ALA SER PHE SEQRES 11 A 220 LYS CYS PRO VAL CYS SER SER THR PHE THR ASP LEU GLU SEQRES 12 A 220 ALA ASN GLN LEU PHE ASP PRO MET THR GLY THR PHE ARG SEQRES 13 A 220 CYS THR PHE CYS HIS THR GLU VAL GLU GLU ASP GLU SER SEQRES 14 A 220 ALA MET PRO LYS LYS ASP ALA ARG THR LEU LEU ALA ARG SEQRES 15 A 220 PHE ASN GLU GLN ILE GLU PRO ILE TYR ALA LEU LEU ARG SEQRES 16 A 220 GLU THR GLU ASP VAL ASN LEU ALA TYR GLU ILE LEU GLU SEQRES 17 A 220 PRO GLU PRO THR GLU ILE PRO ALA LEU LYS GLN SER SEQRES 1 B 108 GLY SER HIS MET PRO LYS TYR ASN VAL ARG ASP LYS LYS SEQRES 2 B 108 ALA LEU LEU ARG LEU LEU ASP GLN HIS ASP GLN ARG GLY SEQRES 3 B 108 LEU GLY GLY ILE LEU LEU GLU ASP ILE GLU GLU ALA LEU SEQRES 4 B 108 PRO ASN SER GLN LYS ALA VAL LYS ALA LEU GLY ASP GLN SEQRES 5 B 108 ILE LEU PHE VAL ASN ARG PRO ASP LYS LYS LYS ILE LEU SEQRES 6 B 108 PHE PHE ASN ASP LYS SER CYS GLN PHE SER VAL ASP GLU SEQRES 7 B 108 GLU PHE GLN LYS LEU TRP ARG SER VAL THR VAL ASP SER SEQRES 8 B 108 MET ASP GLU GLU LYS ILE GLU GLU TYR LEU LYS ARG GLN SEQRES 9 B 108 GLY ILE SER SER HET ZN A 301 1 HETNAM ZN ZINC ION FORMUL 3 ZN ZN 2+ FORMUL 4 HOH *77(H2 O) HELIX 1 AA1 PRO A 11 TYR A 26 1 16 HELIX 2 AA2 GLY A 27 ASN A 40 1 14 HELIX 3 AA3 GLU A 45 LYS A 53 1 9 HELIX 4 AA4 ASP A 55 ASP A 69 1 15 HELIX 5 AA5 ASN A 95 ASN A 123 1 29 HELIX 6 AA6 THR A 137 GLN A 143 1 7 HELIX 7 AA7 LEU A 176 THR A 194 1 19 HELIX 8 AA8 ASP B 147 GLY B 162 1 16 HELIX 9 AA9 LEU B 168 LEU B 175 1 8 HELIX 10 AB1 ASN B 177 LEU B 185 1 9 HELIX 11 AB2 ASP B 213 SER B 222 1 10 HELIX 12 AB3 ASP B 229 GLY B 241 1 13 SHEET 1 AA1 3 VAL A 43 LYS A 44 0 SHEET 2 AA1 3 THR A 86 ILE A 94 -1 O TYR A 92 N VAL A 43 SHEET 3 AA1 3 ILE A 72 THR A 80 -1 N GLU A 79 O THR A 87 SHEET 1 AA2 3 THR A 135 PHE A 136 0 SHEET 2 AA2 3 PHE A 127 LYS A 128 -1 N PHE A 127 O PHE A 136 SHEET 3 AA2 3 GLU A 162 GLU A 163 -1 O GLU A 162 N LYS A 128 SHEET 1 AA3 3 ILE B 166 LEU B 167 0 SHEET 2 AA3 3 LYS B 199 PHE B 203 -1 O LEU B 201 N ILE B 166 SHEET 3 AA3 3 ILE B 189 ASN B 193 -1 N LEU B 190 O PHE B 202 LINK SG CYS A 129 ZN ZN A 301 1555 1555 2.44 LINK SG CYS A 132 ZN ZN A 301 1555 1555 2.29 LINK SG CYS A 154 ZN ZN A 301 1555 1555 2.41 LINK SG CYS A 157 ZN ZN A 301 1555 1555 2.38 SITE 1 AC1 4 CYS A 129 CYS A 132 CYS A 154 CYS A 157 CRYST1 51.520 69.200 116.530 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019410 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014451 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008581 0.00000