PDB Short entry for 5HCU HEADER HYDROLASE 04-JAN-16 5HCU TITLE CRYSTAL STRUCTURE OF MOUSE ACETYLCHOINESTERASE INHIBITED BY DFP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLCHOLINESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 32-571; COMPND 5 SYNONYM: ACHE; COMPND 6 EC: 3.1.1.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ACHE; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.H.TRAN,L.TONG REVDAT 2 27-SEP-23 5HCU 1 REMARK REVDAT 1 20-JAN-16 5HCU 0 SPRSDE 20-JAN-16 5HCU 5DTG JRNL AUTH F.S.KATZ,S.PECIC,T.H.TRAN,I.TRAKHT,L.SCHNEIDER,Z.ZHU, JRNL AUTH 2 L.TON-THAT,M.LUZAC,V.ZLATANIC,S.DAMERA,J.MACDONALD, JRNL AUTH 3 D.W.LANDRY,L.TONG,M.N.STOJANOVIC JRNL TITL DISCOVERY OF NEW CLASSES OF COMPOUNDS THAT REACTIVATE JRNL TITL 2 ACETYLCHOLINESTERASE INHIBITED BY ORGANOPHOSPHATES. JRNL REF CHEMBIOCHEM V. 16 2205 2015 JRNL REFN ESSN 1439-7633 JRNL PMID 26350723 JRNL DOI 10.1002/CBIC.201500348 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 65006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2386 - 7.3243 0.98 2835 160 0.1774 0.1792 REMARK 3 2 7.3243 - 5.8171 1.00 2796 135 0.1850 0.1947 REMARK 3 3 5.8171 - 5.0829 1.00 2736 151 0.1686 0.2135 REMARK 3 4 5.0829 - 4.6186 1.00 2680 155 0.1488 0.1855 REMARK 3 5 4.6186 - 4.2878 1.00 2727 145 0.1501 0.1617 REMARK 3 6 4.2878 - 4.0352 1.00 2703 136 0.1667 0.2125 REMARK 3 7 4.0352 - 3.8332 1.00 2677 161 0.1733 0.2225 REMARK 3 8 3.8332 - 3.6664 1.00 2688 140 0.1821 0.2117 REMARK 3 9 3.6664 - 3.5253 1.00 2656 154 0.1972 0.2198 REMARK 3 10 3.5253 - 3.4037 1.00 2707 104 0.2208 0.2683 REMARK 3 11 3.4037 - 3.2973 1.00 2682 131 0.2283 0.2596 REMARK 3 12 3.2973 - 3.2031 1.00 2698 128 0.2429 0.2734 REMARK 3 13 3.2031 - 3.1188 1.00 2654 147 0.2378 0.2862 REMARK 3 14 3.1188 - 3.0427 1.00 2666 132 0.2370 0.2556 REMARK 3 15 3.0427 - 2.9735 1.00 2670 168 0.2452 0.3017 REMARK 3 16 2.9735 - 2.9103 1.00 2610 136 0.2552 0.2753 REMARK 3 17 2.9103 - 2.8520 1.00 2684 153 0.2651 0.2664 REMARK 3 18 2.8520 - 2.7982 1.00 2639 145 0.2581 0.3165 REMARK 3 19 2.7982 - 2.7483 1.00 2685 134 0.2688 0.3119 REMARK 3 20 2.7483 - 2.7017 1.00 2638 140 0.2575 0.2769 REMARK 3 21 2.7017 - 2.6581 1.00 2655 132 0.2674 0.2916 REMARK 3 22 2.6581 - 2.6172 1.00 2627 136 0.2730 0.2948 REMARK 3 23 2.6172 - 2.5787 1.00 2676 150 0.2863 0.3388 REMARK 3 24 2.5787 - 2.5424 1.00 2616 148 0.2925 0.3145 REMARK 3 25 2.5424 - 2.5081 1.00 2672 143 0.3048 0.3156 REMARK 3 26 2.5081 - 2.4755 1.00 2650 128 0.3199 0.4255 REMARK 3 27 2.4755 - 2.4445 1.00 2651 142 0.3539 0.3686 REMARK 3 28 2.4445 - 2.4151 0.98 2590 134 0.3614 0.3678 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 8615 REMARK 3 ANGLE : 1.215 11765 REMARK 3 CHIRALITY : 0.057 1262 REMARK 3 PLANARITY : 0.009 1548 REMARK 3 DIHEDRAL : 14.386 3099 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 20.9512 -8.6213 -11.0868 REMARK 3 T TENSOR REMARK 3 T11: 0.4298 T22: 0.4008 REMARK 3 T33: 0.4358 T12: -0.0437 REMARK 3 T13: -0.0079 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.2407 L22: 0.1387 REMARK 3 L33: 1.1646 L12: -0.0803 REMARK 3 L13: -0.4727 L23: -0.1366 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: 0.0184 S13: 0.0733 REMARK 3 S21: 0.0214 S22: -0.0290 S23: -0.0607 REMARK 3 S31: -0.1511 S32: 0.0415 S33: 0.0307 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND SEGID A REMARK 3 SELECTION : CHAIN B AND SEGID B REMARK 3 ATOM PAIRS NUMBER : 4840 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HCU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76507 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.415 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2HA2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% V/V PEG 600, 0.1 M SODIUM CITRATE, REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.28750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.30850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.17300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 113.30850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.28750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.17300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 259 REMARK 465 GLY A 260 REMARK 465 GLY A 261 REMARK 465 ALA A 262 REMARK 465 GLY A 263 REMARK 465 GLY A 264 REMARK 465 ASP B -2 REMARK 465 PRO B -1 REMARK 465 MET B 0 REMARK 465 GLU B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 PRO B 259 REMARK 465 GLY B 260 REMARK 465 GLY B 261 REMARK 465 ALA B 262 REMARK 465 GLY B 263 REMARK 465 GLY B 264 REMARK 465 SER B 495 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG B 356 NE CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB ASN A 265 OE1 GLU A 268 1.67 REMARK 500 NH1 ARG A 485 O HOH A 601 1.80 REMARK 500 NH2 ARG A 356 OG1 THR A 383 1.86 REMARK 500 ND2 ASN A 265 OE2 GLU A 268 1.89 REMARK 500 OE1 GLU A 166 O HOH A 602 1.91 REMARK 500 OE2 GLU A 243 NH1 ARG A 246 1.98 REMARK 500 ND2 ASN B 67 O HOH B 601 2.12 REMARK 500 NH1 ARG A 45 OE1 GLU A 51 2.12 REMARK 500 NH2 ARG B 424 O HOH B 602 2.14 REMARK 500 CE2 PHE B 295 CD2 PHE B 338 2.17 REMARK 500 O ASP A 134 O HOH A 603 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O THR A 63 NH1 ARG B 493 4445 1.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 258 CD PRO A 258 N -0.108 REMARK 500 PRO A 290 CD PRO A 290 N -0.119 REMARK 500 GLU B 202 C MIS B 203 N 0.145 REMARK 500 MIS B 203 C ALA B 204 N 0.180 REMARK 500 ARG B 356 CD ARG B 356 NE -0.109 REMARK 500 ARG B 356 CZ ARG B 356 NH2 -0.167 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MIS A 203 O - C - N ANGL. DEV. = -9.7 DEGREES REMARK 500 GLN B 7 C - N - CA ANGL. DEV. = -15.6 DEGREES REMARK 500 ARG B 356 NH1 - CZ - NH2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG B 356 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 GLN B 369 C - N - CA ANGL. DEV. = -27.6 DEGREES REMARK 500 GLN B 369 O - C - N ANGL. DEV. = -22.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 47 -3.45 72.28 REMARK 500 MIS A 203 -125.28 60.11 REMARK 500 ASP A 306 -79.58 -127.92 REMARK 500 TYR A 341 55.14 -108.04 REMARK 500 VAL A 407 -62.77 -129.23 REMARK 500 HIS A 447 123.75 -38.57 REMARK 500 ASN A 514 -167.40 -160.82 REMARK 500 PHE B 47 -3.84 72.80 REMARK 500 ALA B 62 51.17 -119.21 REMARK 500 MIS B 203 -124.00 59.83 REMARK 500 ASP B 306 -78.94 -128.69 REMARK 500 TYR B 341 54.44 -107.68 REMARK 500 VAL B 407 -62.68 -131.26 REMARK 500 HIS B 447 123.98 -39.02 REMARK 500 ASN B 514 -169.37 -162.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN B 7 -14.27 REMARK 500 GLN B 369 -29.53 REMARK 500 REMARK 500 REMARK: NULL DBREF 5HCU A 1 540 UNP P21836 ACES_MOUSE 32 571 DBREF 5HCU B 1 540 UNP P21836 ACES_MOUSE 32 571 SEQADV 5HCU ASP A -2 UNP P21836 EXPRESSION TAG SEQADV 5HCU PRO A -1 UNP P21836 EXPRESSION TAG SEQADV 5HCU MET A 0 UNP P21836 EXPRESSION TAG SEQADV 5HCU ASP B -2 UNP P21836 EXPRESSION TAG SEQADV 5HCU PRO B -1 UNP P21836 EXPRESSION TAG SEQADV 5HCU MET B 0 UNP P21836 EXPRESSION TAG SEQRES 1 A 543 ASP PRO MET GLU GLY ARG GLU ASP PRO GLN LEU LEU VAL SEQRES 2 A 543 ARG VAL ARG GLY GLY GLN LEU ARG GLY ILE ARG LEU LYS SEQRES 3 A 543 ALA PRO GLY GLY PRO VAL SER ALA PHE LEU GLY ILE PRO SEQRES 4 A 543 PHE ALA GLU PRO PRO VAL GLY SER ARG ARG PHE MET PRO SEQRES 5 A 543 PRO GLU PRO LYS ARG PRO TRP SER GLY VAL LEU ASP ALA SEQRES 6 A 543 THR THR PHE GLN ASN VAL CYS TYR GLN TYR VAL ASP THR SEQRES 7 A 543 LEU TYR PRO GLY PHE GLU GLY THR GLU MET TRP ASN PRO SEQRES 8 A 543 ASN ARG GLU LEU SER GLU ASP CYS LEU TYR LEU ASN VAL SEQRES 9 A 543 TRP THR PRO TYR PRO ARG PRO ALA SER PRO THR PRO VAL SEQRES 10 A 543 LEU ILE TRP ILE TYR GLY GLY GLY PHE TYR SER GLY ALA SEQRES 11 A 543 ALA SER LEU ASP VAL TYR ASP GLY ARG PHE LEU ALA GLN SEQRES 12 A 543 VAL GLU GLY ALA VAL LEU VAL SER MET ASN TYR ARG VAL SEQRES 13 A 543 GLY THR PHE GLY PHE LEU ALA LEU PRO GLY SER ARG GLU SEQRES 14 A 543 ALA PRO GLY ASN VAL GLY LEU LEU ASP GLN ARG LEU ALA SEQRES 15 A 543 LEU GLN TRP VAL GLN GLU ASN ILE ALA ALA PHE GLY GLY SEQRES 16 A 543 ASP PRO MET SER VAL THR LEU PHE GLY GLU MIS ALA GLY SEQRES 17 A 543 ALA ALA SER VAL GLY MET HIS ILE LEU SER LEU PRO SER SEQRES 18 A 543 ARG SER LEU PHE HIS ARG ALA VAL LEU GLN SER GLY THR SEQRES 19 A 543 PRO ASN GLY PRO TRP ALA THR VAL SER ALA GLY GLU ALA SEQRES 20 A 543 ARG ARG ARG ALA THR LEU LEU ALA ARG LEU VAL GLY CYS SEQRES 21 A 543 PRO PRO GLY GLY ALA GLY GLY ASN ASP THR GLU LEU ILE SEQRES 22 A 543 ALA CYS LEU ARG THR ARG PRO ALA GLN ASP LEU VAL ASP SEQRES 23 A 543 HIS GLU TRP HIS VAL LEU PRO GLN GLU SER ILE PHE ARG SEQRES 24 A 543 PHE SER PHE VAL PRO VAL VAL ASP GLY ASP PHE LEU SER SEQRES 25 A 543 ASP THR PRO GLU ALA LEU ILE ASN THR GLY ASP PHE GLN SEQRES 26 A 543 ASP LEU GLN VAL LEU VAL GLY VAL VAL LYS ASP GLU GLY SEQRES 27 A 543 SER TYR PHE LEU VAL TYR GLY VAL PRO GLY PHE SER LYS SEQRES 28 A 543 ASP ASN GLU SER LEU ILE SER ARG ALA GLN PHE LEU ALA SEQRES 29 A 543 GLY VAL ARG ILE GLY VAL PRO GLN ALA SER ASP LEU ALA SEQRES 30 A 543 ALA GLU ALA VAL VAL LEU HIS TYR THR ASP TRP LEU HIS SEQRES 31 A 543 PRO GLU ASP PRO THR HIS LEU ARG ASP ALA MET SER ALA SEQRES 32 A 543 VAL VAL GLY ASP HIS ASN VAL VAL CYS PRO VAL ALA GLN SEQRES 33 A 543 LEU ALA GLY ARG LEU ALA ALA GLN GLY ALA ARG VAL TYR SEQRES 34 A 543 ALA TYR ILE PHE GLU HIS ARG ALA SER THR LEU THR TRP SEQRES 35 A 543 PRO LEU TRP MET GLY VAL PRO HIS GLY TYR GLU ILE GLU SEQRES 36 A 543 PHE ILE PHE GLY LEU PRO LEU ASP PRO SER LEU ASN TYR SEQRES 37 A 543 THR THR GLU GLU ARG ILE PHE ALA GLN ARG LEU MET LYS SEQRES 38 A 543 TYR TRP THR ASN PHE ALA ARG THR GLY ASP PRO ASN ASP SEQRES 39 A 543 PRO ARG ASP SER LYS SER PRO GLN TRP PRO PRO TYR THR SEQRES 40 A 543 THR ALA ALA GLN GLN TYR VAL SER LEU ASN LEU LYS PRO SEQRES 41 A 543 LEU GLU VAL ARG ARG GLY LEU ARG ALA GLN THR CYS ALA SEQRES 42 A 543 PHE TRP ASN ARG PHE LEU PRO LYS LEU LEU SEQRES 1 B 543 ASP PRO MET GLU GLY ARG GLU ASP PRO GLN LEU LEU VAL SEQRES 2 B 543 ARG VAL ARG GLY GLY GLN LEU ARG GLY ILE ARG LEU LYS SEQRES 3 B 543 ALA PRO GLY GLY PRO VAL SER ALA PHE LEU GLY ILE PRO SEQRES 4 B 543 PHE ALA GLU PRO PRO VAL GLY SER ARG ARG PHE MET PRO SEQRES 5 B 543 PRO GLU PRO LYS ARG PRO TRP SER GLY VAL LEU ASP ALA SEQRES 6 B 543 THR THR PHE GLN ASN VAL CYS TYR GLN TYR VAL ASP THR SEQRES 7 B 543 LEU TYR PRO GLY PHE GLU GLY THR GLU MET TRP ASN PRO SEQRES 8 B 543 ASN ARG GLU LEU SER GLU ASP CYS LEU TYR LEU ASN VAL SEQRES 9 B 543 TRP THR PRO TYR PRO ARG PRO ALA SER PRO THR PRO VAL SEQRES 10 B 543 LEU ILE TRP ILE TYR GLY GLY GLY PHE TYR SER GLY ALA SEQRES 11 B 543 ALA SER LEU ASP VAL TYR ASP GLY ARG PHE LEU ALA GLN SEQRES 12 B 543 VAL GLU GLY ALA VAL LEU VAL SER MET ASN TYR ARG VAL SEQRES 13 B 543 GLY THR PHE GLY PHE LEU ALA LEU PRO GLY SER ARG GLU SEQRES 14 B 543 ALA PRO GLY ASN VAL GLY LEU LEU ASP GLN ARG LEU ALA SEQRES 15 B 543 LEU GLN TRP VAL GLN GLU ASN ILE ALA ALA PHE GLY GLY SEQRES 16 B 543 ASP PRO MET SER VAL THR LEU PHE GLY GLU MIS ALA GLY SEQRES 17 B 543 ALA ALA SER VAL GLY MET HIS ILE LEU SER LEU PRO SER SEQRES 18 B 543 ARG SER LEU PHE HIS ARG ALA VAL LEU GLN SER GLY THR SEQRES 19 B 543 PRO ASN GLY PRO TRP ALA THR VAL SER ALA GLY GLU ALA SEQRES 20 B 543 ARG ARG ARG ALA THR LEU LEU ALA ARG LEU VAL GLY CYS SEQRES 21 B 543 PRO PRO GLY GLY ALA GLY GLY ASN ASP THR GLU LEU ILE SEQRES 22 B 543 ALA CYS LEU ARG THR ARG PRO ALA GLN ASP LEU VAL ASP SEQRES 23 B 543 HIS GLU TRP HIS VAL LEU PRO GLN GLU SER ILE PHE ARG SEQRES 24 B 543 PHE SER PHE VAL PRO VAL VAL ASP GLY ASP PHE LEU SER SEQRES 25 B 543 ASP THR PRO GLU ALA LEU ILE ASN THR GLY ASP PHE GLN SEQRES 26 B 543 ASP LEU GLN VAL LEU VAL GLY VAL VAL LYS ASP GLU GLY SEQRES 27 B 543 SER TYR PHE LEU VAL TYR GLY VAL PRO GLY PHE SER LYS SEQRES 28 B 543 ASP ASN GLU SER LEU ILE SER ARG ALA GLN PHE LEU ALA SEQRES 29 B 543 GLY VAL ARG ILE GLY VAL PRO GLN ALA SER ASP LEU ALA SEQRES 30 B 543 ALA GLU ALA VAL VAL LEU HIS TYR THR ASP TRP LEU HIS SEQRES 31 B 543 PRO GLU ASP PRO THR HIS LEU ARG ASP ALA MET SER ALA SEQRES 32 B 543 VAL VAL GLY ASP HIS ASN VAL VAL CYS PRO VAL ALA GLN SEQRES 33 B 543 LEU ALA GLY ARG LEU ALA ALA GLN GLY ALA ARG VAL TYR SEQRES 34 B 543 ALA TYR ILE PHE GLU HIS ARG ALA SER THR LEU THR TRP SEQRES 35 B 543 PRO LEU TRP MET GLY VAL PRO HIS GLY TYR GLU ILE GLU SEQRES 36 B 543 PHE ILE PHE GLY LEU PRO LEU ASP PRO SER LEU ASN TYR SEQRES 37 B 543 THR THR GLU GLU ARG ILE PHE ALA GLN ARG LEU MET LYS SEQRES 38 B 543 TYR TRP THR ASN PHE ALA ARG THR GLY ASP PRO ASN ASP SEQRES 39 B 543 PRO ARG ASP SER LYS SER PRO GLN TRP PRO PRO TYR THR SEQRES 40 B 543 THR ALA ALA GLN GLN TYR VAL SER LEU ASN LEU LYS PRO SEQRES 41 B 543 LEU GLU VAL ARG ARG GLY LEU ARG ALA GLN THR CYS ALA SEQRES 42 B 543 PHE TRP ASN ARG PHE LEU PRO LYS LEU LEU MODRES 5HCU MIS A 203 SER MODIFIED RESIDUE MODRES 5HCU MIS B 203 SER MODIFIED RESIDUE HET MIS A 203 13 HET MIS B 203 13 HETNAM MIS MONOISOPROPYLPHOSPHORYLSERINE FORMUL 1 MIS 2(C6 H14 N O6 P) FORMUL 3 HOH *131(H2 O) HELIX 1 AA1 MET A 0 GLU A 4 5 5 HELIX 2 AA2 VAL A 42 ARG A 46 5 5 HELIX 3 AA3 PHE A 80 MET A 85 1 6 HELIX 4 AA4 LEU A 130 ASP A 134 5 5 HELIX 5 AA5 GLY A 135 GLY A 143 1 9 HELIX 6 AA6 VAL A 153 LEU A 159 1 7 HELIX 7 AA7 ASN A 170 ILE A 187 1 18 HELIX 8 AA8 ALA A 188 PHE A 190 5 3 HELIX 9 AA9 MIS A 203 LEU A 214 1 12 HELIX 10 AB1 SER A 215 SER A 220 1 6 HELIX 11 AB2 ALA A 241 VAL A 255 1 15 HELIX 12 AB3 ASP A 266 ARG A 276 1 11 HELIX 13 AB4 PRO A 277 GLU A 285 1 9 HELIX 14 AB5 THR A 311 GLY A 319 1 9 HELIX 15 AB6 GLY A 335 VAL A 340 1 6 HELIX 16 AB7 SER A 355 VAL A 367 1 13 HELIX 17 AB8 SER A 371 THR A 383 1 13 HELIX 18 AB9 ASP A 390 VAL A 407 1 18 HELIX 19 AC1 VAL A 407 GLN A 421 1 15 HELIX 20 AC2 PRO A 440 GLY A 444 5 5 HELIX 21 AC3 GLU A 450 PHE A 455 1 6 HELIX 22 AC4 GLY A 456 ASN A 464 5 9 HELIX 23 AC5 THR A 466 GLY A 487 1 22 HELIX 24 AC6 ARG A 525 PHE A 535 1 11 HELIX 25 AC7 LEU A 536 LEU A 540 5 5 HELIX 26 AC8 VAL B 42 ARG B 46 5 5 HELIX 27 AC9 PHE B 80 MET B 85 1 6 HELIX 28 AD1 LEU B 130 ASP B 134 5 5 HELIX 29 AD2 GLY B 135 GLY B 143 1 9 HELIX 30 AD3 VAL B 153 LEU B 159 1 7 HELIX 31 AD4 ASN B 170 ILE B 187 1 18 HELIX 32 AD5 ALA B 188 PHE B 190 5 3 HELIX 33 AD6 MIS B 203 LEU B 214 1 12 HELIX 34 AD7 SER B 215 SER B 220 1 6 HELIX 35 AD8 SER B 240 VAL B 255 1 16 HELIX 36 AD9 ASP B 266 ARG B 276 1 11 HELIX 37 AE1 PRO B 277 GLU B 285 1 9 HELIX 38 AE2 THR B 311 GLY B 319 1 9 HELIX 39 AE3 GLY B 335 VAL B 340 1 6 HELIX 40 AE4 SER B 355 VAL B 367 1 13 HELIX 41 AE5 SER B 371 THR B 383 1 13 HELIX 42 AE6 ASP B 390 VAL B 407 1 18 HELIX 43 AE7 VAL B 407 GLN B 421 1 15 HELIX 44 AE8 PRO B 440 GLY B 444 5 5 HELIX 45 AE9 GLU B 450 PHE B 455 1 6 HELIX 46 AF1 GLY B 456 ASN B 464 5 9 HELIX 47 AF2 THR B 466 GLY B 487 1 22 HELIX 48 AF3 ARG B 525 PHE B 535 1 11 HELIX 49 AF4 LEU B 536 LEU B 540 5 5 SHEET 1 AA1 3 LEU A 9 VAL A 12 0 SHEET 2 AA1 3 GLY A 15 ARG A 18 -1 O GLY A 15 N VAL A 12 SHEET 3 AA1 3 VAL A 59 ASP A 61 1 O LEU A 60 N GLN A 16 SHEET 1 AA211 ILE A 20 ALA A 24 0 SHEET 2 AA211 GLY A 27 PRO A 36 -1 O ALA A 31 N ILE A 20 SHEET 3 AA211 TYR A 98 PRO A 104 -1 O VAL A 101 N PHE A 32 SHEET 4 AA211 VAL A 145 MET A 149 -1 O LEU A 146 N TRP A 102 SHEET 5 AA211 THR A 112 ILE A 118 1 N LEU A 115 O VAL A 145 SHEET 6 AA211 GLY A 192 GLU A 202 1 O THR A 198 N VAL A 114 SHEET 7 AA211 ARG A 224 GLN A 228 1 O GLN A 228 N GLY A 201 SHEET 8 AA211 GLN A 325 VAL A 331 1 O LEU A 327 N LEU A 227 SHEET 9 AA211 ARG A 424 PHE A 430 1 O PHE A 430 N VAL A 330 SHEET 10 AA211 GLN A 509 LEU A 513 1 O LEU A 513 N ILE A 429 SHEET 11 AA211 GLU A 519 ARG A 522 -1 O ARG A 521 N TYR A 510 SHEET 1 AA3 2 VAL A 68 CYS A 69 0 SHEET 2 AA3 2 LEU A 92 SER A 93 1 O SER A 93 N VAL A 68 SHEET 1 AA4 2 VAL A 239 SER A 240 0 SHEET 2 AA4 2 VAL A 302 VAL A 303 1 O VAL A 303 N VAL A 239 SHEET 1 AA5 3 LEU B 9 VAL B 12 0 SHEET 2 AA5 3 GLY B 15 ARG B 18 -1 O GLY B 15 N VAL B 12 SHEET 3 AA5 3 VAL B 59 ASP B 61 1 O LEU B 60 N GLN B 16 SHEET 1 AA611 ILE B 20 ALA B 24 0 SHEET 2 AA611 GLY B 27 PRO B 36 -1 O VAL B 29 N LEU B 22 SHEET 3 AA611 TYR B 98 PRO B 104 -1 O VAL B 101 N PHE B 32 SHEET 4 AA611 VAL B 145 MET B 149 -1 O LEU B 146 N TRP B 102 SHEET 5 AA611 THR B 112 ILE B 118 1 N LEU B 115 O VAL B 147 SHEET 6 AA611 GLY B 192 GLU B 202 1 O THR B 198 N VAL B 114 SHEET 7 AA611 ARG B 224 GLN B 228 1 O GLN B 228 N GLY B 201 SHEET 8 AA611 GLN B 325 VAL B 331 1 O LEU B 327 N LEU B 227 SHEET 9 AA611 ARG B 424 PHE B 430 1 O PHE B 430 N VAL B 330 SHEET 10 AA611 GLN B 509 LEU B 513 1 O LEU B 513 N ILE B 429 SHEET 11 AA611 GLU B 519 ARG B 522 -1 O ARG B 521 N TYR B 510 SHEET 1 AA7 2 VAL B 68 CYS B 69 0 SHEET 2 AA7 2 LEU B 92 SER B 93 1 O SER B 93 N VAL B 68 SSBOND 1 CYS A 69 CYS A 96 1555 1555 2.07 SSBOND 2 CYS A 257 CYS A 272 1555 1555 2.08 SSBOND 3 CYS A 409 CYS A 529 1555 1555 2.05 SSBOND 4 CYS B 69 CYS B 96 1555 1555 2.06 SSBOND 5 CYS B 257 CYS B 272 1555 1555 2.07 SSBOND 6 CYS B 409 CYS B 529 1555 1555 2.06 LINK C GLU A 202 N MIS A 203 1555 1555 1.43 LINK C MIS A 203 N ALA A 204 1555 1555 1.35 LINK C GLU B 202 N MIS B 203 1555 1555 1.48 LINK C MIS B 203 N ALA B 204 1555 1555 1.52 CISPEP 1 TYR A 105 PRO A 106 0 -1.90 CISPEP 2 TYR B 105 PRO B 106 0 2.93 CISPEP 3 CYS B 257 PRO B 258 0 -3.16 CRYST1 78.575 114.346 226.617 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012727 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008745 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004413 0.00000