PDB Short entry for 5HPY HEADER GENE REGULATION/SIGNALING PROTEIN 21-JAN-16 5HPY TITLE CRYSTAL STRUCTURE OF RHOA.GDP.MGF3-IN COMPLEX WITH HUMAN MYOSIN 9B TITLE 2 RHOGAP DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCONVENTIONAL MYOSIN-IXB; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: UNCONVENTIONAL MYOSIN-9B; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRANSFORMING PROTEIN RHOA; COMPND 8 CHAIN: B, F; COMPND 9 FRAGMENT: UNP RESIDUES 3-181; COMPND 10 SYNONYM: RHO CDNA CLONE 12,H12; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MYO9B, MYR5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32A; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: RHOA, ARH12, ARHA, RHO12; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS COMPLEX, RHO GTPASES, RHOGAP, GENE REGULATION-SIGNALING PROTEIN KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR F.S.YI,J.Q.REN,W.FENG REVDAT 3 08-NOV-23 5HPY 1 JRNL REMARK LINK REVDAT 2 17-AUG-16 5HPY 1 JRNL REVDAT 1 13-JUL-16 5HPY 0 JRNL AUTH F.YI,R.KONG,J.REN,L.ZHU,J.LOU,J.Y.WU,W.FENG JRNL TITL NONCANONICAL MYO9B-RHOGAP ACCELERATES RHOA GTP HYDROLYSIS BY JRNL TITL 2 A DUAL-ARGININE-FINGER MECHANISM JRNL REF J.MOL.BIOL. V. 428 3043 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 27363609 JRNL DOI 10.1016/J.JMB.2016.06.014 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 38582 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7078 - 5.6405 0.97 2966 128 0.1889 0.1994 REMARK 3 2 5.6405 - 4.4780 1.00 2859 159 0.1838 0.2088 REMARK 3 3 4.4780 - 3.9123 1.00 2867 140 0.1811 0.2377 REMARK 3 4 3.9123 - 3.5547 1.00 2809 154 0.2062 0.2409 REMARK 3 5 3.5547 - 3.3000 1.00 2834 153 0.2240 0.2827 REMARK 3 6 3.3000 - 3.1054 1.00 2847 100 0.2311 0.2918 REMARK 3 7 3.1054 - 2.9499 1.00 2795 161 0.2424 0.2914 REMARK 3 8 2.9499 - 2.8215 1.00 2809 134 0.2297 0.2756 REMARK 3 9 2.8215 - 2.7129 1.00 2819 119 0.0000 0.0000 REMARK 3 10 2.7129 - 2.6193 1.00 2796 150 0.2513 0.2736 REMARK 3 11 2.6193 - 2.5374 1.00 2768 160 0.2683 0.3136 REMARK 3 12 2.5374 - 2.4649 1.00 2764 150 0.2716 0.2964 REMARK 3 13 2.4649 - 2.4000 1.00 2781 160 0.2860 0.3078 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5939 REMARK 3 ANGLE : 1.257 8061 REMARK 3 CHIRALITY : 0.053 929 REMARK 3 PLANARITY : 0.006 1029 REMARK 3 DIHEDRAL : 15.999 2235 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 23 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2224 11.8529 26.7539 REMARK 3 T TENSOR REMARK 3 T11: 0.9238 T22: 0.5997 REMARK 3 T33: 0.6657 T12: -0.0102 REMARK 3 T13: -0.1469 T23: 0.1812 REMARK 3 L TENSOR REMARK 3 L11: 4.2467 L22: 5.1706 REMARK 3 L33: 4.4820 L12: 0.7036 REMARK 3 L13: -1.9077 L23: 0.3133 REMARK 3 S TENSOR REMARK 3 S11: 0.0605 S12: -0.3633 S13: -1.0452 REMARK 3 S21: 1.2402 S22: 0.1989 S23: -0.3345 REMARK 3 S31: 1.3866 S32: -0.4444 S33: -0.2793 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5054 27.3083 24.6232 REMARK 3 T TENSOR REMARK 3 T11: 0.4487 T22: 0.6263 REMARK 3 T33: 0.4378 T12: 0.0011 REMARK 3 T13: -0.1662 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 1.2249 L22: 1.6914 REMARK 3 L33: 2.0539 L12: -0.9539 REMARK 3 L13: -0.1582 L23: -0.7020 REMARK 3 S TENSOR REMARK 3 S11: -0.3456 S12: -0.7830 S13: 0.1268 REMARK 3 S21: 0.4548 S22: 0.3003 S23: -0.5872 REMARK 3 S31: -0.1449 S32: 0.3067 S33: 0.0952 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 263 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3934 11.0211 19.6708 REMARK 3 T TENSOR REMARK 3 T11: 0.8921 T22: 0.5885 REMARK 3 T33: 1.0365 T12: 0.1615 REMARK 3 T13: -0.1827 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 3.4056 L22: 7.2945 REMARK 3 L33: 4.0826 L12: 0.6213 REMARK 3 L13: -0.1076 L23: -1.8349 REMARK 3 S TENSOR REMARK 3 S11: 0.1005 S12: -0.3414 S13: -2.0252 REMARK 3 S21: 0.0001 S22: 0.0773 S23: -1.0078 REMARK 3 S31: 1.9290 S32: 0.7313 S33: -0.1922 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 264 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4291 21.6698 24.4183 REMARK 3 T TENSOR REMARK 3 T11: 0.5631 T22: 0.7100 REMARK 3 T33: 0.4473 T12: -0.1114 REMARK 3 T13: -0.0531 T23: 0.1330 REMARK 3 L TENSOR REMARK 3 L11: 3.1183 L22: 3.1894 REMARK 3 L33: 4.7887 L12: -0.2293 REMARK 3 L13: 0.3748 L23: -0.3647 REMARK 3 S TENSOR REMARK 3 S11: 0.0670 S12: -0.5707 S13: -0.4122 REMARK 3 S21: 0.2825 S22: 0.0815 S23: 0.4573 REMARK 3 S31: 0.5140 S32: -1.0679 S33: -0.1530 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 340 THROUGH 365 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7300 27.1034 16.9625 REMARK 3 T TENSOR REMARK 3 T11: 0.4920 T22: 0.5064 REMARK 3 T33: 0.4979 T12: -0.0415 REMARK 3 T13: -0.1532 T23: 0.1066 REMARK 3 L TENSOR REMARK 3 L11: 3.7636 L22: 5.1616 REMARK 3 L33: 2.5169 L12: -1.1423 REMARK 3 L13: -2.5578 L23: -0.6333 REMARK 3 S TENSOR REMARK 3 S11: -0.1807 S12: 0.3975 S13: -0.1796 REMARK 3 S21: -0.6032 S22: -0.0304 S23: 0.7481 REMARK 3 S31: 0.2303 S32: -0.2212 S33: 0.1784 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 366 THROUGH 398 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5828 28.9590 31.9462 REMARK 3 T TENSOR REMARK 3 T11: 0.5029 T22: 0.7730 REMARK 3 T33: 0.4748 T12: 0.0950 REMARK 3 T13: 0.0046 T23: 0.1523 REMARK 3 L TENSOR REMARK 3 L11: 1.6523 L22: 1.8652 REMARK 3 L33: 1.8179 L12: 0.5300 REMARK 3 L13: -1.0840 L23: -0.2453 REMARK 3 S TENSOR REMARK 3 S11: -0.3169 S12: -0.5485 S13: -0.0520 REMARK 3 S21: 0.2146 S22: 0.0092 S23: 0.1464 REMARK 3 S31: -0.2613 S32: -0.2418 S33: 0.1724 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8372 41.0510 7.4847 REMARK 3 T TENSOR REMARK 3 T11: 0.4132 T22: 0.2924 REMARK 3 T33: 0.4657 T12: -0.0648 REMARK 3 T13: 0.0004 T23: -0.0460 REMARK 3 L TENSOR REMARK 3 L11: 4.5070 L22: 3.0213 REMARK 3 L33: 5.7946 L12: -1.9830 REMARK 3 L13: -0.0845 L23: -1.7115 REMARK 3 S TENSOR REMARK 3 S11: 0.1161 S12: -0.0290 S13: 0.6331 REMARK 3 S21: -0.0339 S22: -0.1077 S23: -0.4101 REMARK 3 S31: -0.5698 S32: 0.1312 S33: -0.0480 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 74 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6158 34.9606 7.4773 REMARK 3 T TENSOR REMARK 3 T11: 0.3959 T22: 0.4073 REMARK 3 T33: 0.6654 T12: -0.0379 REMARK 3 T13: 0.0705 T23: -0.0363 REMARK 3 L TENSOR REMARK 3 L11: 4.9960 L22: 5.4000 REMARK 3 L33: 4.5125 L12: -1.3075 REMARK 3 L13: 0.8495 L23: -0.6897 REMARK 3 S TENSOR REMARK 3 S11: 0.0928 S12: 0.0097 S13: 0.6678 REMARK 3 S21: -0.1079 S22: -0.1105 S23: -1.1649 REMARK 3 S31: -0.2029 S32: 0.8677 S33: 0.0184 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 198 THROUGH 263 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.6701 14.9224 26.9985 REMARK 3 T TENSOR REMARK 3 T11: 0.7647 T22: 0.7134 REMARK 3 T33: 0.6519 T12: 0.1518 REMARK 3 T13: -0.1044 T23: 0.1222 REMARK 3 L TENSOR REMARK 3 L11: 4.3189 L22: 2.4369 REMARK 3 L33: 3.2533 L12: -0.3213 REMARK 3 L13: -2.7961 L23: -0.1942 REMARK 3 S TENSOR REMARK 3 S11: -0.3743 S12: -0.7626 S13: -0.9498 REMARK 3 S21: 0.3017 S22: 0.0096 S23: -0.2980 REMARK 3 S31: 1.0896 S32: 0.5381 S33: 0.2437 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 264 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): -65.9522 21.2563 24.8647 REMARK 3 T TENSOR REMARK 3 T11: 0.6753 T22: 0.8108 REMARK 3 T33: 0.4695 T12: -0.0887 REMARK 3 T13: -0.1329 T23: 0.0414 REMARK 3 L TENSOR REMARK 3 L11: 2.6659 L22: 2.4135 REMARK 3 L33: 3.3477 L12: 0.3586 REMARK 3 L13: -0.3577 L23: 0.6408 REMARK 3 S TENSOR REMARK 3 S11: 0.2036 S12: -0.1527 S13: -0.2722 REMARK 3 S21: -0.2689 S22: -0.3379 S23: 0.4779 REMARK 3 S31: 0.4357 S32: -0.7563 S33: 0.1201 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 316 THROUGH 354 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.6752 24.0520 30.9182 REMARK 3 T TENSOR REMARK 3 T11: 0.5604 T22: 0.6656 REMARK 3 T33: 0.3644 T12: -0.0099 REMARK 3 T13: -0.0789 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 2.3534 L22: 2.7280 REMARK 3 L33: 4.1756 L12: -1.0212 REMARK 3 L13: -0.8437 L23: -0.8397 REMARK 3 S TENSOR REMARK 3 S11: 0.0891 S12: -0.7243 S13: -0.2362 REMARK 3 S21: 0.3144 S22: 0.0262 S23: 0.1015 REMARK 3 S31: 0.5587 S32: -0.2705 S33: -0.1021 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 355 THROUGH 362 ) REMARK 3 ORIGIN FOR THE GROUP (A): -66.3135 21.3216 12.5700 REMARK 3 T TENSOR REMARK 3 T11: 1.1932 T22: 1.3747 REMARK 3 T33: 1.3801 T12: -0.1382 REMARK 3 T13: -0.3887 T23: -0.2757 REMARK 3 L TENSOR REMARK 3 L11: 1.2063 L22: 1.0670 REMARK 3 L33: 2.8739 L12: 0.1038 REMARK 3 L13: 0.1335 L23: -0.7102 REMARK 3 S TENSOR REMARK 3 S11: -0.5252 S12: 2.2615 S13: -1.2536 REMARK 3 S21: -0.7793 S22: 0.1779 S23: -0.2159 REMARK 3 S31: -0.5790 S32: 0.0635 S33: 0.2646 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 363 THROUGH 398 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.0312 28.4911 33.3941 REMARK 3 T TENSOR REMARK 3 T11: 0.5099 T22: 0.8623 REMARK 3 T33: 0.4904 T12: 0.1157 REMARK 3 T13: -0.0170 T23: 0.1347 REMARK 3 L TENSOR REMARK 3 L11: 1.3137 L22: 2.6632 REMARK 3 L33: 4.5931 L12: 0.9101 REMARK 3 L13: -1.5504 L23: -0.4491 REMARK 3 S TENSOR REMARK 3 S11: -0.3443 S12: -0.4312 S13: -0.0366 REMARK 3 S21: 0.2222 S22: -0.1659 S23: 0.1933 REMARK 3 S31: -0.6667 S32: -0.6601 S33: 0.4972 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 3 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.1985 42.5682 2.1015 REMARK 3 T TENSOR REMARK 3 T11: 0.5563 T22: 0.2987 REMARK 3 T33: 0.4455 T12: -0.0031 REMARK 3 T13: 0.0084 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 3.4139 L22: 1.8580 REMARK 3 L33: 4.2708 L12: 1.5375 REMARK 3 L13: -1.2985 L23: 0.1062 REMARK 3 S TENSOR REMARK 3 S11: 0.2428 S12: 0.3845 S13: 0.4655 REMARK 3 S21: -0.5517 S22: 0.5709 S23: 0.4802 REMARK 3 S31: -0.7142 S32: 0.0068 S33: -0.7859 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 13 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.1500 40.9385 15.5830 REMARK 3 T TENSOR REMARK 3 T11: 0.4176 T22: 0.5366 REMARK 3 T33: 0.6927 T12: -0.1126 REMARK 3 T13: 0.0601 T23: -0.2107 REMARK 3 L TENSOR REMARK 3 L11: 3.6825 L22: 2.2498 REMARK 3 L33: 4.1678 L12: -0.7185 REMARK 3 L13: -0.2686 L23: 2.1117 REMARK 3 S TENSOR REMARK 3 S11: 0.3432 S12: -0.8473 S13: 1.3676 REMARK 3 S21: -0.0704 S22: -0.0738 S23: -1.0054 REMARK 3 S31: -0.5769 S32: 0.5025 S33: -0.3846 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 27 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.7581 44.8656 15.0119 REMARK 3 T TENSOR REMARK 3 T11: 0.5149 T22: 0.5077 REMARK 3 T33: 0.8305 T12: -0.1013 REMARK 3 T13: -0.0386 T23: -0.1771 REMARK 3 L TENSOR REMARK 3 L11: 2.3051 L22: 4.0331 REMARK 3 L33: 5.1574 L12: -0.4106 REMARK 3 L13: -1.1277 L23: -2.4425 REMARK 3 S TENSOR REMARK 3 S11: 0.0725 S12: -0.4534 S13: 0.7461 REMARK 3 S21: 0.4645 S22: 0.0058 S23: -0.6262 REMARK 3 S31: -1.1473 S32: 0.3999 S33: -0.1765 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 49 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.4630 46.1418 3.2447 REMARK 3 T TENSOR REMARK 3 T11: 0.5962 T22: 0.3778 REMARK 3 T33: 0.6439 T12: -0.1595 REMARK 3 T13: 0.2574 T23: -0.0752 REMARK 3 L TENSOR REMARK 3 L11: 2.6222 L22: 0.9587 REMARK 3 L33: 1.8337 L12: -0.3341 REMARK 3 L13: 0.0577 L23: 1.2099 REMARK 3 S TENSOR REMARK 3 S11: -0.1453 S12: 0.4516 S13: 0.2253 REMARK 3 S21: -0.9637 S22: 0.4476 S23: -0.9549 REMARK 3 S31: -0.3308 S32: 0.1942 S33: -0.2307 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 61 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): -54.2375 27.4502 11.7776 REMARK 3 T TENSOR REMARK 3 T11: 0.3897 T22: 0.4164 REMARK 3 T33: 0.4961 T12: -0.0034 REMARK 3 T13: -0.0919 T23: -0.0818 REMARK 3 L TENSOR REMARK 3 L11: 3.5113 L22: 5.0863 REMARK 3 L33: 2.2237 L12: -1.5777 REMARK 3 L13: 1.1391 L23: -2.7047 REMARK 3 S TENSOR REMARK 3 S11: 0.1508 S12: 0.2128 S13: -0.8775 REMARK 3 S21: -0.2628 S22: 0.3169 S23: 0.3289 REMARK 3 S31: 0.7788 S32: 0.1379 S33: -0.4526 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 74 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.7390 29.7513 7.8726 REMARK 3 T TENSOR REMARK 3 T11: 0.3987 T22: 0.4093 REMARK 3 T33: 0.4037 T12: 0.0235 REMARK 3 T13: 0.0251 T23: -0.0986 REMARK 3 L TENSOR REMARK 3 L11: 3.1392 L22: 4.5474 REMARK 3 L33: 2.2943 L12: -1.1329 REMARK 3 L13: -0.9207 L23: -0.7128 REMARK 3 S TENSOR REMARK 3 S11: 0.1653 S12: -0.2974 S13: 0.0891 REMARK 3 S21: -0.3494 S22: 0.0264 S23: -0.5441 REMARK 3 S31: 0.3257 S32: 0.5553 S33: -0.1366 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 107 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.8946 36.6168 11.0242 REMARK 3 T TENSOR REMARK 3 T11: 0.3629 T22: 0.6805 REMARK 3 T33: 0.6840 T12: -0.0184 REMARK 3 T13: 0.1446 T23: -0.2126 REMARK 3 L TENSOR REMARK 3 L11: 2.7181 L22: 4.8785 REMARK 3 L33: 1.2651 L12: -0.6750 REMARK 3 L13: -1.6660 L23: -1.0976 REMARK 3 S TENSOR REMARK 3 S11: 0.1594 S12: -0.4071 S13: 0.6478 REMARK 3 S21: -0.2200 S22: 0.1168 S23: -0.9511 REMARK 3 S31: -0.3639 S32: 1.2919 S33: -0.3292 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 125 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.3631 29.9782 25.3573 REMARK 3 T TENSOR REMARK 3 T11: 0.6289 T22: 1.8081 REMARK 3 T33: 0.8951 T12: 0.2038 REMARK 3 T13: -0.1344 T23: -0.1657 REMARK 3 L TENSOR REMARK 3 L11: 3.1324 L22: 2.7259 REMARK 3 L33: 7.7711 L12: -2.4081 REMARK 3 L13: -0.0402 L23: 1.8439 REMARK 3 S TENSOR REMARK 3 S11: 0.3874 S12: -1.6366 S13: -0.0268 REMARK 3 S21: 0.6983 S22: 1.1039 S23: -0.9504 REMARK 3 S31: 0.5078 S32: 0.8457 S33: -1.4416 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 141 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.4497 36.5763 9.4006 REMARK 3 T TENSOR REMARK 3 T11: 0.3431 T22: 1.0262 REMARK 3 T33: 0.9641 T12: -0.1728 REMARK 3 T13: 0.1213 T23: -0.2448 REMARK 3 L TENSOR REMARK 3 L11: 0.5922 L22: 2.5412 REMARK 3 L33: 4.5543 L12: 0.5826 REMARK 3 L13: 1.5879 L23: 0.5589 REMARK 3 S TENSOR REMARK 3 S11: 0.4381 S12: -0.5462 S13: 0.9793 REMARK 3 S21: -0.0828 S22: -0.1386 S23: -1.2057 REMARK 3 S31: 0.0599 S32: 1.8342 S33: -0.4108 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 167 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.4630 45.6789 2.6566 REMARK 3 T TENSOR REMARK 3 T11: 0.5760 T22: 0.6689 REMARK 3 T33: 1.0570 T12: -0.2010 REMARK 3 T13: 0.2492 T23: -0.0954 REMARK 3 L TENSOR REMARK 3 L11: 2.7780 L22: 3.8881 REMARK 3 L33: 7.2491 L12: -2.6309 REMARK 3 L13: 2.1203 L23: -1.9671 REMARK 3 S TENSOR REMARK 3 S11: 0.1519 S12: 0.1338 S13: 1.6244 REMARK 3 S21: -0.2402 S22: -0.3425 S23: -0.5857 REMARK 3 S31: -0.2918 S32: 1.9958 S33: 0.0453 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HPY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217515. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38652 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OW3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3350, 0.2M SODIUM REMARK 280 MALONATE PH 7.0., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 57.02750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.38100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.02750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.38100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 345 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 185 REMARK 465 PRO A 186 REMARK 465 GLY A 187 REMARK 465 SER A 188 REMARK 465 GLU A 189 REMARK 465 PHE A 190 REMARK 465 PRO A 191 REMARK 465 GLY A 192 REMARK 465 VAL A 193 REMARK 465 GLU A 194 REMARK 465 PRO A 195 REMARK 465 ASP A 203 REMARK 465 SER A 204 REMARK 465 LEU A 205 REMARK 465 THR A 206 REMARK 465 SER A 207 REMARK 465 ASP A 208 REMARK 465 LYS A 209 REMARK 465 ALA A 210 REMARK 465 PRO A 358 REMARK 465 ASP A 359 REMARK 465 ASN A 360 REMARK 465 GLU A 399 REMARK 465 ALA A 400 REMARK 465 ALA A 401 REMARK 465 GLU A 402 REMARK 465 SER A 403 REMARK 465 ILE A 404 REMARK 465 ALA A 405 REMARK 465 PHE A 406 REMARK 465 ARG A 407 REMARK 465 ARG A 408 REMARK 465 LEU A 409 REMARK 465 SER A 410 REMARK 465 LEU A 411 REMARK 465 LEU A 412 REMARK 465 ARG A 413 REMARK 465 GLN A 414 REMARK 465 ASN A 415 REMARK 465 ALA A 416 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 GLU B 1 REMARK 465 PHE B 2 REMARK 465 ALA B 181 REMARK 465 GLY D 185 REMARK 465 PRO D 186 REMARK 465 GLY D 187 REMARK 465 SER D 188 REMARK 465 GLU D 189 REMARK 465 PHE D 190 REMARK 465 PRO D 191 REMARK 465 GLY D 192 REMARK 465 VAL D 193 REMARK 465 GLU D 194 REMARK 465 PRO D 195 REMARK 465 GLY D 196 REMARK 465 HIS D 197 REMARK 465 VAL D 202 REMARK 465 ASP D 203 REMARK 465 SER D 204 REMARK 465 LEU D 205 REMARK 465 THR D 206 REMARK 465 SER D 207 REMARK 465 ASP D 208 REMARK 465 LYS D 209 REMARK 465 ALA D 210 REMARK 465 ASP D 359 REMARK 465 ASN D 360 REMARK 465 GLU D 399 REMARK 465 ALA D 400 REMARK 465 ALA D 401 REMARK 465 GLU D 402 REMARK 465 SER D 403 REMARK 465 ILE D 404 REMARK 465 ALA D 405 REMARK 465 PHE D 406 REMARK 465 ARG D 407 REMARK 465 ARG D 408 REMARK 465 LEU D 409 REMARK 465 SER D 410 REMARK 465 LEU D 411 REMARK 465 LEU D 412 REMARK 465 ARG D 413 REMARK 465 GLN D 414 REMARK 465 ASN D 415 REMARK 465 ALA D 416 REMARK 465 GLY F -3 REMARK 465 PRO F -2 REMARK 465 GLY F -1 REMARK 465 SER F 0 REMARK 465 GLU F 1 REMARK 465 PHE F 2 REMARK 465 ALA F 181 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 197 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 200 CG1 CG2 REMARK 470 CYS A 201 SG REMARK 470 MET A 225 CG SD CE REMARK 470 GLN A 248 CG CD OE1 NE2 REMARK 470 ASP A 253 CG OD1 OD2 REMARK 470 LYS A 258 CG CD CE NZ REMARK 470 LYS A 300 CG CD CE NZ REMARK 470 SER A 361 OG REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 ASN B 109 CG OD1 ND2 REMARK 470 LYS B 135 CG CD CE NZ REMARK 470 ARG B 176 CG CD NE CZ NH1 NH2 REMARK 470 ASN D 241 CG OD1 ND2 REMARK 470 GLN D 248 CG CD OE1 NE2 REMARK 470 ASP D 253 CG OD1 OD2 REMARK 470 LYS D 258 CG CD CE NZ REMARK 470 LYS D 368 CG CD CE NZ REMARK 470 LYS F 51 CG CD CE NZ REMARK 470 GLN F 52 CG CD OE1 NE2 REMARK 470 GLU F 125 CG CD OE1 OE2 REMARK 470 ARG F 129 CG CD NE CZ NH1 NH2 REMARK 470 GLU F 130 CG CD OE1 OE2 REMARK 470 LYS F 133 CG CD CE NZ REMARK 470 LYS F 135 CG CD CE NZ REMARK 470 GLN F 136 CG CD OE1 NE2 REMARK 470 ARG F 176 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER F 85 OD1 ASP F 87 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 197 -87.02 93.40 REMARK 500 TYR A 234 -16.04 73.66 REMARK 500 THR A 252 -76.62 -70.98 REMARK 500 PRO A 281 157.13 -48.45 REMARK 500 ARG A 340 2.46 80.12 REMARK 500 ASP A 362 -66.62 -91.10 REMARK 500 LEU A 364 -72.60 -53.52 REMARK 500 LYS B 98 -53.67 -131.90 REMARK 500 VAL D 200 149.01 -172.70 REMARK 500 TYR D 234 -19.73 76.70 REMARK 500 ASP D 253 74.24 -110.52 REMARK 500 ALA F 15 17.49 59.27 REMARK 500 VAL F 38 -62.23 -98.46 REMARK 500 LYS F 98 -52.19 -121.54 REMARK 500 ASN F 123 61.02 -110.62 REMARK 500 LYS F 164 -4.62 73.68 REMARK 500 ASP F 165 107.06 -42.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 19 OG1 REMARK 620 2 THR B 37 OG1 74.7 REMARK 620 3 GDP B 203 O3B 88.7 159.6 REMARK 620 4 HOH B 305 O 86.6 100.8 89.9 REMARK 620 5 HOH B 319 O 86.1 80.2 87.0 172.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MGF B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GDP B 203 O2B REMARK 620 2 MGF B 201 F1 83.4 REMARK 620 3 MGF B 201 F2 75.9 117.8 REMARK 620 4 MGF B 201 F3 106.6 122.7 119.4 REMARK 620 5 HOH B 318 O 158.7 97.5 85.1 90.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR F 19 OG1 REMARK 620 2 THR F 37 OG1 83.8 REMARK 620 3 GDP F 202 O2B 80.5 163.1 REMARK 620 4 HOH F 307 O 85.9 100.2 84.9 REMARK 620 5 HOH F 315 O 80.1 88.1 83.1 162.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR F 42 OH REMARK 620 2 ASP F 59 OD2 118.6 REMARK 620 3 HOH F 312 O 125.6 110.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MGF F 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GDP F 202 O3B REMARK 620 2 MGF F 201 F1 107.1 REMARK 620 3 MGF F 201 F2 82.1 119.8 REMARK 620 4 MGF F 201 F3 77.6 120.4 119.7 REMARK 620 5 HOH F 314 O 159.1 93.5 91.1 88.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MGF B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MGF F 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP F 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 204 DBREF 5HPY A 191 416 UNP Q13459 MYO9B_HUMAN 1691 1916 DBREF 5HPY B 3 181 UNP P61586 RHOA_HUMAN 3 181 DBREF 5HPY D 191 416 UNP Q13459 MYO9B_HUMAN 1691 1916 DBREF 5HPY F 3 181 UNP P61586 RHOA_HUMAN 3 181 SEQADV 5HPY GLY A 185 UNP Q13459 EXPRESSION TAG SEQADV 5HPY PRO A 186 UNP Q13459 EXPRESSION TAG SEQADV 5HPY GLY A 187 UNP Q13459 EXPRESSION TAG SEQADV 5HPY SER A 188 UNP Q13459 EXPRESSION TAG SEQADV 5HPY GLU A 189 UNP Q13459 EXPRESSION TAG SEQADV 5HPY PHE A 190 UNP Q13459 EXPRESSION TAG SEQADV 5HPY GLY B -3 UNP P61586 EXPRESSION TAG SEQADV 5HPY PRO B -2 UNP P61586 EXPRESSION TAG SEQADV 5HPY GLY B -1 UNP P61586 EXPRESSION TAG SEQADV 5HPY SER B 0 UNP P61586 EXPRESSION TAG SEQADV 5HPY GLU B 1 UNP P61586 EXPRESSION TAG SEQADV 5HPY PHE B 2 UNP P61586 EXPRESSION TAG SEQADV 5HPY ASN B 25 UNP P61586 PHE 25 ENGINEERED MUTATION SEQADV 5HPY GLY D 185 UNP Q13459 EXPRESSION TAG SEQADV 5HPY PRO D 186 UNP Q13459 EXPRESSION TAG SEQADV 5HPY GLY D 187 UNP Q13459 EXPRESSION TAG SEQADV 5HPY SER D 188 UNP Q13459 EXPRESSION TAG SEQADV 5HPY GLU D 189 UNP Q13459 EXPRESSION TAG SEQADV 5HPY PHE D 190 UNP Q13459 EXPRESSION TAG SEQADV 5HPY GLY F -3 UNP P61586 EXPRESSION TAG SEQADV 5HPY PRO F -2 UNP P61586 EXPRESSION TAG SEQADV 5HPY GLY F -1 UNP P61586 EXPRESSION TAG SEQADV 5HPY SER F 0 UNP P61586 EXPRESSION TAG SEQADV 5HPY GLU F 1 UNP P61586 EXPRESSION TAG SEQADV 5HPY PHE F 2 UNP P61586 EXPRESSION TAG SEQADV 5HPY ASN F 25 UNP P61586 PHE 25 ENGINEERED MUTATION SEQRES 1 A 232 GLY PRO GLY SER GLU PHE PRO GLY VAL GLU PRO GLY HIS SEQRES 2 A 232 PHE GLY VAL CYS VAL ASP SER LEU THR SER ASP LYS ALA SEQRES 3 A 232 SER VAL PRO ILE VAL LEU GLU LYS LEU LEU GLU HIS VAL SEQRES 4 A 232 GLU MET HIS GLY LEU TYR THR GLU GLY LEU TYR ARG LYS SEQRES 5 A 232 SER GLY ALA ALA ASN ARG THR ARG GLU LEU ARG GLN ALA SEQRES 6 A 232 LEU GLN THR ASP PRO ALA ALA VAL LYS LEU GLU ASN PHE SEQRES 7 A 232 PRO ILE HIS ALA ILE THR GLY VAL LEU LYS GLN TRP LEU SEQRES 8 A 232 ARG GLU LEU PRO GLU PRO LEU MET THR PHE ALA GLN TYR SEQRES 9 A 232 GLY ASP PHE LEU ARG ALA VAL GLU LEU PRO GLU LYS GLN SEQRES 10 A 232 GLU GLN LEU ALA ALA ILE TYR ALA VAL LEU GLU HIS LEU SEQRES 11 A 232 PRO GLU ALA ASN HIS ASN SER LEU GLU ARG LEU ILE PHE SEQRES 12 A 232 HIS LEU VAL LYS VAL ALA LEU LEU GLU ASP VAL ASN ARG SEQRES 13 A 232 MET SER PRO GLY ALA LEU ALA ILE ILE PHE ALA PRO CYS SEQRES 14 A 232 LEU LEU ARG CYS PRO ASP ASN SER ASP PRO LEU THR SER SEQRES 15 A 232 MET LYS ASP VAL LEU LYS ILE THR THR CYS VAL GLU MET SEQRES 16 A 232 LEU ILE LYS GLU GLN MET ARG LYS TYR LYS VAL LYS MET SEQRES 17 A 232 GLU GLU ILE SER GLN LEU GLU ALA ALA GLU SER ILE ALA SEQRES 18 A 232 PHE ARG ARG LEU SER LEU LEU ARG GLN ASN ALA SEQRES 1 B 185 GLY PRO GLY SER GLU PHE ALA ILE ARG LYS LYS LEU VAL SEQRES 2 B 185 ILE VAL GLY ASP GLY ALA CYS GLY LYS THR CYS LEU LEU SEQRES 3 B 185 ILE VAL ASN SER LYS ASP GLN PHE PRO GLU VAL TYR VAL SEQRES 4 B 185 PRO THR VAL PHE GLU ASN TYR VAL ALA ASP ILE GLU VAL SEQRES 5 B 185 ASP GLY LYS GLN VAL GLU LEU ALA LEU TRP ASP THR ALA SEQRES 6 B 185 GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO LEU SER TYR SEQRES 7 B 185 PRO ASP THR ASP VAL ILE LEU MET CYS PHE SER ILE ASP SEQRES 8 B 185 SER PRO ASP SER LEU GLU ASN ILE PRO GLU LYS TRP THR SEQRES 9 B 185 PRO GLU VAL LYS HIS PHE CYS PRO ASN VAL PRO ILE ILE SEQRES 10 B 185 LEU VAL GLY ASN LYS LYS ASP LEU ARG ASN ASP GLU HIS SEQRES 11 B 185 THR ARG ARG GLU LEU ALA LYS MET LYS GLN GLU PRO VAL SEQRES 12 B 185 LYS PRO GLU GLU GLY ARG ASP MET ALA ASN ARG ILE GLY SEQRES 13 B 185 ALA PHE GLY TYR MET GLU CYS SER ALA LYS THR LYS ASP SEQRES 14 B 185 GLY VAL ARG GLU VAL PHE GLU MET ALA THR ARG ALA ALA SEQRES 15 B 185 LEU GLN ALA SEQRES 1 D 232 GLY PRO GLY SER GLU PHE PRO GLY VAL GLU PRO GLY HIS SEQRES 2 D 232 PHE GLY VAL CYS VAL ASP SER LEU THR SER ASP LYS ALA SEQRES 3 D 232 SER VAL PRO ILE VAL LEU GLU LYS LEU LEU GLU HIS VAL SEQRES 4 D 232 GLU MET HIS GLY LEU TYR THR GLU GLY LEU TYR ARG LYS SEQRES 5 D 232 SER GLY ALA ALA ASN ARG THR ARG GLU LEU ARG GLN ALA SEQRES 6 D 232 LEU GLN THR ASP PRO ALA ALA VAL LYS LEU GLU ASN PHE SEQRES 7 D 232 PRO ILE HIS ALA ILE THR GLY VAL LEU LYS GLN TRP LEU SEQRES 8 D 232 ARG GLU LEU PRO GLU PRO LEU MET THR PHE ALA GLN TYR SEQRES 9 D 232 GLY ASP PHE LEU ARG ALA VAL GLU LEU PRO GLU LYS GLN SEQRES 10 D 232 GLU GLN LEU ALA ALA ILE TYR ALA VAL LEU GLU HIS LEU SEQRES 11 D 232 PRO GLU ALA ASN HIS ASN SER LEU GLU ARG LEU ILE PHE SEQRES 12 D 232 HIS LEU VAL LYS VAL ALA LEU LEU GLU ASP VAL ASN ARG SEQRES 13 D 232 MET SER PRO GLY ALA LEU ALA ILE ILE PHE ALA PRO CYS SEQRES 14 D 232 LEU LEU ARG CYS PRO ASP ASN SER ASP PRO LEU THR SER SEQRES 15 D 232 MET LYS ASP VAL LEU LYS ILE THR THR CYS VAL GLU MET SEQRES 16 D 232 LEU ILE LYS GLU GLN MET ARG LYS TYR LYS VAL LYS MET SEQRES 17 D 232 GLU GLU ILE SER GLN LEU GLU ALA ALA GLU SER ILE ALA SEQRES 18 D 232 PHE ARG ARG LEU SER LEU LEU ARG GLN ASN ALA SEQRES 1 F 185 GLY PRO GLY SER GLU PHE ALA ILE ARG LYS LYS LEU VAL SEQRES 2 F 185 ILE VAL GLY ASP GLY ALA CYS GLY LYS THR CYS LEU LEU SEQRES 3 F 185 ILE VAL ASN SER LYS ASP GLN PHE PRO GLU VAL TYR VAL SEQRES 4 F 185 PRO THR VAL PHE GLU ASN TYR VAL ALA ASP ILE GLU VAL SEQRES 5 F 185 ASP GLY LYS GLN VAL GLU LEU ALA LEU TRP ASP THR ALA SEQRES 6 F 185 GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO LEU SER TYR SEQRES 7 F 185 PRO ASP THR ASP VAL ILE LEU MET CYS PHE SER ILE ASP SEQRES 8 F 185 SER PRO ASP SER LEU GLU ASN ILE PRO GLU LYS TRP THR SEQRES 9 F 185 PRO GLU VAL LYS HIS PHE CYS PRO ASN VAL PRO ILE ILE SEQRES 10 F 185 LEU VAL GLY ASN LYS LYS ASP LEU ARG ASN ASP GLU HIS SEQRES 11 F 185 THR ARG ARG GLU LEU ALA LYS MET LYS GLN GLU PRO VAL SEQRES 12 F 185 LYS PRO GLU GLU GLY ARG ASP MET ALA ASN ARG ILE GLY SEQRES 13 F 185 ALA PHE GLY TYR MET GLU CYS SER ALA LYS THR LYS ASP SEQRES 14 F 185 GLY VAL ARG GLU VAL PHE GLU MET ALA THR ARG ALA ALA SEQRES 15 F 185 LEU GLN ALA HET MGF B 201 4 HET MG B 202 1 HET GDP B 203 28 HET MGF F 201 4 HET GDP F 202 28 HET MG F 203 1 HET MG F 204 1 HETNAM MGF TRIFLUOROMAGNESATE HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 5 MGF 2(F3 MG 1-) FORMUL 6 MG 3(MG 2+) FORMUL 7 GDP 2(C10 H15 N5 O11 P2) FORMUL 12 HOH *136(H2 O) HELIX 1 AA1 PRO A 213 GLY A 227 1 15 HELIX 2 AA2 ALA A 239 ASP A 253 1 15 HELIX 3 AA3 LYS A 258 PHE A 262 5 5 HELIX 4 AA4 PRO A 263 LEU A 278 1 16 HELIX 5 AA5 GLN A 287 LEU A 297 1 11 HELIX 6 AA6 GLU A 299 GLU A 312 1 14 HELIX 7 AA7 PRO A 315 LEU A 335 1 21 HELIX 8 AA8 LEU A 335 ARG A 340 1 6 HELIX 9 AA9 SER A 342 LEU A 355 1 14 HELIX 10 AB1 THR A 365 SER A 396 1 32 HELIX 11 AB2 GLY B 17 ASP B 28 1 12 HELIX 12 AB3 GLN B 63 ASP B 67 5 5 HELIX 13 AB4 LEU B 69 TYR B 74 5 6 HELIX 14 AB5 SER B 88 LYS B 98 1 11 HELIX 15 AB6 LYS B 98 CYS B 107 1 10 HELIX 16 AB7 LYS B 118 ARG B 122 5 5 HELIX 17 AB8 ASP B 124 MET B 134 1 11 HELIX 18 AB9 LYS B 140 GLY B 152 1 13 HELIX 19 AC1 GLY B 166 GLN B 180 1 15 HELIX 20 AC2 PRO D 213 GLY D 227 1 15 HELIX 21 AC3 ALA D 239 ASP D 253 1 15 HELIX 22 AC4 LYS D 258 PHE D 262 5 5 HELIX 23 AC5 PRO D 263 GLU D 277 1 15 HELIX 24 AC6 GLN D 287 VAL D 295 1 9 HELIX 25 AC7 GLU D 299 GLU D 312 1 14 HELIX 26 AC8 PRO D 315 LEU D 335 1 21 HELIX 27 AC9 LEU D 335 ARG D 340 1 6 HELIX 28 AD1 SER D 342 LEU D 355 1 14 HELIX 29 AD2 ASP D 362 SER D 396 1 35 HELIX 30 AD3 GLY F 17 LYS F 27 1 11 HELIX 31 AD4 GLN F 63 ASP F 67 5 5 HELIX 32 AD5 LEU F 69 TYR F 74 5 6 HELIX 33 AD6 SER F 88 LYS F 98 1 11 HELIX 34 AD7 LYS F 98 CYS F 107 1 10 HELIX 35 AD8 LYS F 118 ARG F 122 5 5 HELIX 36 AD9 ASP F 124 LYS F 133 1 10 HELIX 37 AE1 LYS F 140 GLY F 152 1 13 HELIX 38 AE2 GLY F 166 GLN F 180 1 15 SHEET 1 AA1 6 PHE B 39 VAL B 48 0 SHEET 2 AA1 6 LYS B 51 THR B 60 -1 O LEU B 55 N ALA B 44 SHEET 3 AA1 6 ILE B 4 GLY B 12 1 N LEU B 8 O ALA B 56 SHEET 4 AA1 6 VAL B 79 SER B 85 1 O CYS B 83 N VAL B 11 SHEET 5 AA1 6 ILE B 112 ASN B 117 1 O ASN B 117 N PHE B 84 SHEET 6 AA1 6 GLY B 155 GLU B 158 1 O MET B 157 N GLY B 116 SHEET 1 AA2 6 PHE F 39 VAL F 48 0 SHEET 2 AA2 6 LYS F 51 THR F 60 -1 O VAL F 53 N ILE F 46 SHEET 3 AA2 6 ILE F 4 GLY F 12 1 N LEU F 8 O ALA F 56 SHEET 4 AA2 6 VAL F 79 SER F 85 1 O CYS F 83 N VAL F 11 SHEET 5 AA2 6 ILE F 112 ASN F 117 1 O ILE F 113 N MET F 82 SHEET 6 AA2 6 GLY F 155 GLU F 158 1 O MET F 157 N GLY F 116 LINK OG1 THR B 19 MG MG B 202 1555 1555 2.17 LINK OG1 THR B 37 MG MG B 202 1555 1555 2.18 LINK MG MGF B 201 O2B GDP B 203 1555 1555 2.40 LINK MG MGF B 201 O HOH B 318 1555 1555 2.41 LINK MG MG B 202 O3B GDP B 203 1555 1555 2.13 LINK MG MG B 202 O HOH B 305 1555 1555 2.09 LINK MG MG B 202 O HOH B 319 1555 1555 2.03 LINK OG1 THR F 19 MG MG F 203 1555 1555 2.09 LINK OG1 THR F 37 MG MG F 203 1555 1555 2.01 LINK OH TYR F 42 MG MG F 204 1555 1555 2.67 LINK OD2 ASP F 59 MG MG F 204 1555 1555 2.75 LINK MG MGF F 201 O3B GDP F 202 1555 1555 2.75 LINK MG MGF F 201 O HOH F 314 1555 1555 2.47 LINK O2B GDP F 202 MG MG F 203 1555 1555 2.16 LINK MG MG F 203 O HOH F 307 1555 1555 2.09 LINK MG MG F 203 O HOH F 315 1555 1555 2.27 LINK MG MG F 204 O HOH F 312 1555 1555 2.70 CISPEP 1 GLY A 196 HIS A 197 0 -2.19 CISPEP 2 ASP A 362 PRO A 363 0 -7.73 SITE 1 AC1 12 ARG A 235 GLY B 14 ALA B 15 LYS B 18 SITE 2 AC1 12 PRO B 36 THR B 37 GLY B 62 GLN B 63 SITE 3 AC1 12 MG B 202 GDP B 203 HOH B 318 HOH B 319 SITE 1 AC2 6 THR B 19 THR B 37 MGF B 201 GDP B 203 SITE 2 AC2 6 HOH B 305 HOH B 319 SITE 1 AC3 23 ARG A 235 ARG A 340 ALA B 15 CYS B 16 SITE 2 AC3 23 GLY B 17 LYS B 18 THR B 19 CYS B 20 SITE 3 AC3 23 PHE B 30 TYR B 34 LYS B 118 ASP B 120 SITE 4 AC3 23 LEU B 121 SER B 160 ALA B 161 LYS B 162 SITE 5 AC3 23 MGF B 201 MG B 202 HOH B 305 HOH B 307 SITE 6 AC3 23 HOH B 319 HOH B 320 HOH B 322 SITE 1 AC4 13 ARG D 235 GLY F 14 ALA F 15 LYS F 18 SITE 2 AC4 13 PRO F 36 THR F 37 GLY F 62 GLN F 63 SITE 3 AC4 13 GDP F 202 MG F 203 HOH F 307 HOH F 314 SITE 4 AC4 13 HOH F 315 SITE 1 AC5 21 ARG D 235 ARG D 340 ALA F 15 CYS F 16 SITE 2 AC5 21 GLY F 17 LYS F 18 THR F 19 CYS F 20 SITE 3 AC5 21 TYR F 34 LYS F 118 ASP F 120 LEU F 121 SITE 4 AC5 21 SER F 160 ALA F 161 LYS F 162 MGF F 201 SITE 5 AC5 21 MG F 203 HOH F 307 HOH F 315 HOH F 325 SITE 6 AC5 21 HOH F 336 SITE 1 AC6 6 THR F 19 THR F 37 MGF F 201 GDP F 202 SITE 2 AC6 6 HOH F 307 HOH F 315 SITE 1 AC7 6 THR F 19 THR F 37 GLU F 40 TYR F 42 SITE 2 AC7 6 ASP F 59 HOH F 312 CRYST1 114.055 90.762 93.582 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008768 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011018 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010686 0.00000