PDB Short entry for 5I74 HEADER MEMBRANE PROTEIN 16-FEB-16 5I74 TITLE X-RAY STRUCTURE OF THE TS3 HUMAN SEROTONIN TRANSPORTER COMPLEXED WITH TITLE 2 BR-CITALOPRAM AT THE CENTRAL SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM-DEPENDENT SEROTONIN TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SERT,5HT TRANSPORTER,5HTT,SOLUTE CARRIER FAMILY 6 MEMBER 4; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 8B6 ANTIBODY, HEAVY CHAIN; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: 8B6 ANTIBODY, LIGHT CHAIN; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLC6A4, HTT, SERT; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 15 ORGANISM_TAXID: 10090; SOURCE 16 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.A.COLEMAN,E.M.GREEN,E.GOUAUX REVDAT 5 29-JUL-20 5I74 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 04-MAR-20 5I74 1 JRNL REMARK REVDAT 3 04-MAY-16 5I74 1 JRNL REVDAT 2 20-APR-16 5I74 1 JRNL REVDAT 1 13-APR-16 5I74 0 JRNL AUTH J.A.COLEMAN,E.M.GREEN,E.GOUAUX JRNL TITL X-RAY STRUCTURES AND MECHANISM OF THE HUMAN SEROTONIN JRNL TITL 2 TRANSPORTER. JRNL REF NATURE V. 532 334 2016 JRNL REFN ESSN 1476-4687 JRNL PMID 27049939 JRNL DOI 10.1038/NATURE17629 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1634 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 101.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 39603 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1980 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1101.7235 - 8.1807 0.99 2703 144 0.2551 0.2697 REMARK 3 2 8.1807 - 6.4936 1.00 2691 141 0.2663 0.2935 REMARK 3 3 6.4936 - 5.6728 1.00 2717 141 0.2470 0.3600 REMARK 3 4 5.6728 - 5.1542 1.00 2697 138 0.2251 0.2850 REMARK 3 5 5.1542 - 4.7847 1.00 2719 148 0.1951 0.2362 REMARK 3 6 4.7847 - 4.5026 1.00 2702 140 0.1875 0.3153 REMARK 3 7 4.5026 - 4.2771 1.00 2705 147 0.1973 0.2837 REMARK 3 8 4.2771 - 4.0910 1.00 2703 137 0.2214 0.2608 REMARK 3 9 4.0910 - 3.9335 1.00 2710 147 0.2585 0.3480 REMARK 3 10 3.9335 - 3.7977 1.00 2674 142 0.2635 0.2965 REMARK 3 11 3.7977 - 3.6790 1.00 2723 141 0.2918 0.3292 REMARK 3 12 3.6790 - 3.5738 0.99 2680 139 0.3316 0.3740 REMARK 3 13 3.5738 - 3.4797 0.99 2655 141 0.3507 0.4033 REMARK 3 14 3.4797 - 3.3948 0.93 2544 134 0.3853 0.4498 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.610 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7837 REMARK 3 ANGLE : 1.005 10693 REMARK 3 CHIRALITY : 0.216 1209 REMARK 3 PLANARITY : 0.003 1317 REMARK 3 DIHEDRAL : 10.689 2676 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN B AND RESID 21:138) REMARK 3 ORIGIN FOR THE GROUP (A): 54.7581 167.7348 52.8472 REMARK 3 T TENSOR REMARK 3 T11: 1.1979 T22: 1.2526 REMARK 3 T33: 1.0964 T12: 0.0229 REMARK 3 T13: -0.2499 T23: 0.1725 REMARK 3 L TENSOR REMARK 3 L11: 3.4450 L22: 5.5808 REMARK 3 L33: 2.9971 L12: 1.6087 REMARK 3 L13: -0.3903 L23: -1.9264 REMARK 3 S TENSOR REMARK 3 S11: -0.2977 S12: -0.9492 S13: -0.2952 REMARK 3 S21: 0.5578 S22: -0.0607 S23: -1.7283 REMARK 3 S31: -0.6292 S32: -0.1929 S33: 0.2804 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 139:237) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9917 159.3887 45.3075 REMARK 3 T TENSOR REMARK 3 T11: 3.3294 T22: 3.2489 REMARK 3 T33: 2.3345 T12: -1.2140 REMARK 3 T13: 0.7023 T23: -0.6760 REMARK 3 L TENSOR REMARK 3 L11: 3.9552 L22: 1.5072 REMARK 3 L33: 2.2219 L12: 1.1124 REMARK 3 L13: -1.6803 L23: 0.8672 REMARK 3 S TENSOR REMARK 3 S11: -0.5072 S12: -0.1473 S13: -0.4829 REMARK 3 S21: -2.2608 S22: 0.2344 S23: 0.0930 REMARK 3 S31: 0.7594 S32: 1.5721 S33: 0.5971 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN C AND RESID 22:124) REMARK 3 ORIGIN FOR THE GROUP (A): 44.8634 187.4159 53.6391 REMARK 3 T TENSOR REMARK 3 T11: 1.6841 T22: 1.6235 REMARK 3 T33: 1.8001 T12: 0.5412 REMARK 3 T13: -0.3467 T23: -0.3432 REMARK 3 L TENSOR REMARK 3 L11: 4.3000 L22: 4.6069 REMARK 3 L33: 4.4366 L12: 1.2111 REMARK 3 L13: -1.9262 L23: -1.3818 REMARK 3 S TENSOR REMARK 3 S11: 0.1529 S12: 1.2929 S13: 0.8329 REMARK 3 S21: 0.5333 S22: 0.1014 S23: 1.8679 REMARK 3 S31: -0.4854 S32: -1.7015 S33: -0.1149 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN C AND RESID 125:234) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5896 166.5757 55.1462 REMARK 3 T TENSOR REMARK 3 T11: 1.6458 T22: 5.9428 REMARK 3 T33: 3.7942 T12: -1.1364 REMARK 3 T13: 0.9332 T23: -0.7965 REMARK 3 L TENSOR REMARK 3 L11: 1.2495 L22: 3.7077 REMARK 3 L33: 0.7311 L12: 0.8487 REMARK 3 L13: -0.0277 L23: -1.5684 REMARK 3 S TENSOR REMARK 3 S11: -0.5716 S12: -0.5060 S13: -2.6481 REMARK 3 S21: -0.2972 S22: 0.3742 S23: 2.7440 REMARK 3 S31: 1.3743 S32: -3.9366 S33: -1.0646 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 74:615) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8520 186.2848 2.9308 REMARK 3 T TENSOR REMARK 3 T11: 1.0732 T22: 1.3779 REMARK 3 T33: 1.1987 T12: 0.3276 REMARK 3 T13: -0.2576 T23: 0.0355 REMARK 3 L TENSOR REMARK 3 L11: 2.9541 L22: 1.3580 REMARK 3 L33: 3.3384 L12: 0.4190 REMARK 3 L13: 1.7909 L23: -0.2722 REMARK 3 S TENSOR REMARK 3 S11: -0.5507 S12: -0.4384 S13: 0.4869 REMARK 3 S21: 0.0473 S22: -0.0832 S23: 0.1017 REMARK 3 S31: -0.7964 S32: -0.4007 S33: 0.5259 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I74 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218381. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.902 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41581 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.395 REMARK 200 RESOLUTION RANGE LOW (A) : 101.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.06051 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 8.5, 125 MM NACL, 125 REMARK 280 MM MAGNESIUM CHLORIDE, 33.4% PEG 400, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.08500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.08500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 64.79500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 82.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 64.79500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 82.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.08500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 64.79500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 82.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.08500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 64.79500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 82.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 129.59000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 70.08500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 616 REMARK 465 PRO A 617 REMARK 465 THR A 618 REMARK 465 LEU A 619 REMARK 465 VAL A 620 REMARK 465 PRO A 621 REMARK 465 ARG A 622 REMARK 465 SER B 238 REMARK 465 GLY B 239 REMARK 465 PRO B 240 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 75 OG REMARK 470 GLN A 76 CG CD OE1 NE2 REMARK 470 ARG A 79 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 82 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 82 CZ3 CH2 REMARK 470 ASN A 145 CG OD1 ND2 REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 ASP A 393 CG OD1 OD2 REMARK 470 GLU A 463 CG CD OE1 OE2 REMARK 470 ARG A 464 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 538 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 597 CG CD1 CD2 REMARK 470 ILE A 598 CG1 CG2 CD1 REMARK 470 ILE A 599 CG1 CG2 CD1 REMARK 470 THR A 600 OG1 CG2 REMARK 470 THR A 603 OG1 CG2 REMARK 470 PHE A 604 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 605 CG CD CE NZ REMARK 470 GLU A 606 CG CD OE1 OE2 REMARK 470 ARG A 607 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 608 CG1 CG2 CD1 REMARK 470 ILE A 609 CG1 CG2 CD1 REMARK 470 LYS A 610 CG CD CE NZ REMARK 470 SER A 611 OG REMARK 470 ILE A 612 CG1 CG2 CD1 REMARK 470 THR A 613 OG1 CG2 REMARK 470 GLU A 615 CG CD OE1 OE2 REMARK 470 GLU B 20 CG CD OE1 OE2 REMARK 470 ASN C 232 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 148 -61.48 -104.62 REMARK 500 ILE A 154 -74.91 -122.63 REMARK 500 ASN A 217 -4.16 68.17 REMARK 500 HIS A 235 -74.17 -111.34 REMARK 500 ILE A 270 -55.98 -127.55 REMARK 500 ASN A 351 171.82 177.16 REMARK 500 GLU A 392 -139.88 42.45 REMARK 500 HIS A 456 -16.90 67.55 REMARK 500 ALA A 459 -1.60 69.45 REMARK 500 ALA A 496 -67.15 -126.35 REMARK 500 PHE A 515 -70.15 -116.78 REMARK 500 ALA A 543 -59.95 -123.51 REMARK 500 LYS B 86 -63.90 -97.90 REMARK 500 ARG B 121 135.52 -175.22 REMARK 500 PRO B 172 -166.17 -76.58 REMARK 500 SER C 50 -133.29 59.34 REMARK 500 SER C 70 70.72 55.28 REMARK 500 ALA C 71 -115.62 58.04 REMARK 500 ALA C 104 -177.14 -170.38 REMARK 500 ASN C 158 71.07 58.20 REMARK 500 TYR C 160 138.05 -177.34 REMARK 500 ILE C 170 -74.21 -75.30 REMARK 500 LYS C 189 -72.30 -111.42 REMARK 500 ASN C 210 -74.93 -115.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5I75 RELATED DB: PDB REMARK 900 RELATED ID: 5I73 RELATED DB: PDB REMARK 900 RELATED ID: 5I71 RELATED DB: PDB REMARK 900 RELATED ID: 5I6X RELATED DB: PDB REMARK 900 RELATED ID: 5I6Z RELATED DB: PDB DBREF 5I74 A 76 618 UNP P31645 SC6A4_HUMAN 76 618 DBREF 5I74 B 20 240 PDB 5I74 5I74 20 240 DBREF 5I74 C 21 234 PDB 5I74 5I74 21 234 SEQADV 5I74 GLY A 74 UNP P31645 CLONING ARTIFACT SEQADV 5I74 SER A 75 UNP P31645 CLONING ARTIFACT SEQADV 5I74 ALA A 110 UNP P31645 TYR 110 ENGINEERED MUTATION SEQADV 5I74 ALA A 291 UNP P31645 ILE 291 ENGINEERED MUTATION SEQADV 5I74 SER A 439 UNP P31645 THR 439 ENGINEERED MUTATION SEQADV 5I74 ALA A 554 UNP P31645 CYS 554 ENGINEERED MUTATION SEQADV 5I74 ALA A 580 UNP P31645 CYS 580 ENGINEERED MUTATION SEQADV 5I74 LEU A 619 UNP P31645 CLONING ARTIFACT SEQADV 5I74 VAL A 620 UNP P31645 CLONING ARTIFACT SEQADV 5I74 PRO A 621 UNP P31645 CLONING ARTIFACT SEQADV 5I74 ARG A 622 UNP P31645 CLONING ARTIFACT SEQRES 1 A 549 GLY SER GLN GLY GLU ARG GLU THR TRP GLY LYS LYS VAL SEQRES 2 A 549 ASP PHE LEU LEU SER VAL ILE GLY TYR ALA VAL ASP LEU SEQRES 3 A 549 GLY ASN VAL TRP ARG PHE PRO TYR ILE CYS ALA GLN ASN SEQRES 4 A 549 GLY GLY GLY ALA PHE LEU LEU PRO TYR THR ILE MET ALA SEQRES 5 A 549 ILE PHE GLY GLY ILE PRO LEU PHE TYR MET GLU LEU ALA SEQRES 6 A 549 LEU GLY GLN TYR HIS ARG ASN GLY CYS ILE SER ILE TRP SEQRES 7 A 549 ARG LYS ILE CYS PRO ILE PHE LYS GLY ILE GLY TYR ALA SEQRES 8 A 549 ILE CYS ILE ILE ALA PHE TYR ILE ALA SER TYR TYR ASN SEQRES 9 A 549 THR ILE MET ALA TRP ALA LEU TYR TYR LEU ILE SER SER SEQRES 10 A 549 PHE THR ASP GLN LEU PRO TRP THR SER CYS LYS ASN SER SEQRES 11 A 549 TRP ASN THR GLY ASN CYS THR ASN TYR PHE SER GLU ASP SEQRES 12 A 549 ASN ILE THR TRP THR LEU HIS SER THR SER PRO ALA GLU SEQRES 13 A 549 GLU PHE TYR THR ARG HIS VAL LEU GLN ILE HIS ARG SER SEQRES 14 A 549 LYS GLY LEU GLN ASP LEU GLY GLY ILE SER TRP GLN LEU SEQRES 15 A 549 ALA LEU CYS ILE MET LEU ILE PHE THR VAL ILE TYR PHE SEQRES 16 A 549 SER ILE TRP LYS GLY VAL LYS THR SER GLY LYS VAL VAL SEQRES 17 A 549 TRP VAL THR ALA THR PHE PRO TYR ILE ALA LEU SER VAL SEQRES 18 A 549 LEU LEU VAL ARG GLY ALA THR LEU PRO GLY ALA TRP ARG SEQRES 19 A 549 GLY VAL LEU PHE TYR LEU LYS PRO ASN TRP GLN LYS LEU SEQRES 20 A 549 LEU GLU THR GLY VAL TRP ILE ASP ALA ALA ALA GLN ILE SEQRES 21 A 549 PHE PHE SER LEU GLY PRO GLY PHE GLY VAL LEU LEU ALA SEQRES 22 A 549 PHE ALA SER TYR ASN LYS PHE ASN ASN ASN CYS TYR GLN SEQRES 23 A 549 ASP ALA LEU VAL THR SER VAL VAL ASN CYS MET THR SER SEQRES 24 A 549 PHE VAL SER GLY PHE VAL ILE PHE THR VAL LEU GLY TYR SEQRES 25 A 549 MET ALA GLU MET ARG ASN GLU ASP VAL SER GLU VAL ALA SEQRES 26 A 549 LYS ASP ALA GLY PRO SER LEU LEU PHE ILE THR TYR ALA SEQRES 27 A 549 GLU ALA ILE ALA ASN MET PRO ALA SER THR PHE PHE ALA SEQRES 28 A 549 ILE ILE PHE PHE LEU MET LEU ILE THR LEU GLY LEU ASP SEQRES 29 A 549 SER SER PHE ALA GLY LEU GLU GLY VAL ILE THR ALA VAL SEQRES 30 A 549 LEU ASP GLU PHE PRO HIS VAL TRP ALA LYS ARG ARG GLU SEQRES 31 A 549 ARG PHE VAL LEU ALA VAL VAL ILE THR CYS PHE PHE GLY SEQRES 32 A 549 SER LEU VAL THR LEU THR PHE GLY GLY ALA TYR VAL VAL SEQRES 33 A 549 LYS LEU LEU GLU GLU TYR ALA THR GLY PRO ALA VAL LEU SEQRES 34 A 549 THR VAL ALA LEU ILE GLU ALA VAL ALA VAL SER TRP PHE SEQRES 35 A 549 TYR GLY ILE THR GLN PHE CYS ARG ASP VAL LYS GLU MET SEQRES 36 A 549 LEU GLY PHE SER PRO GLY TRP PHE TRP ARG ILE CYS TRP SEQRES 37 A 549 VAL ALA ILE SER PRO LEU PHE LEU LEU PHE ILE ILE ALA SEQRES 38 A 549 SER PHE LEU MET SER PRO PRO GLN LEU ARG LEU PHE GLN SEQRES 39 A 549 TYR ASN TYR PRO TYR TRP SER ILE ILE LEU GLY TYR ALA SEQRES 40 A 549 ILE GLY THR SER SER PHE ILE CYS ILE PRO THR TYR ILE SEQRES 41 A 549 ALA TYR ARG LEU ILE ILE THR PRO GLY THR PHE LYS GLU SEQRES 42 A 549 ARG ILE ILE LYS SER ILE THR PRO GLU THR PRO THR LEU SEQRES 43 A 549 VAL PRO ARG SEQRES 1 B 221 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 B 221 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 B 221 TYR THR PHE THR ASP TYR TYR MET ASN TRP VAL LYS GLN SEQRES 4 B 221 SER HIS GLY LYS SER LEU GLU TRP ILE GLY ASN ILE ASN SEQRES 5 B 221 PRO ASN ASN GLY GLY THR SER TYR ASN GLN LYS PHE LYS SEQRES 6 B 221 GLY LYS ALA THR LEU THR VAL ASP LYS SER SER THR THR SEQRES 7 B 221 ALA TYR MET GLU LEU ARG SER LEU THR SER GLU ASP SER SEQRES 8 B 221 ALA VAL TYR TYR CYS THR ARG SER PRO VAL ARG PRO TYR SEQRES 9 B 221 TYR PHE ASP TYR TRP GLY GLN GLY THR THR LEU THR VAL SEQRES 10 B 221 SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU SEQRES 11 B 221 ALA PRO GLY CYS GLY ASP THR THR GLY SER SER VAL THR SEQRES 12 B 221 LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU SER VAL SEQRES 13 B 221 THR VAL THR TRP ASN SER GLY SER LEU SER SER SER VAL SEQRES 14 B 221 HIS THR PHE PRO ALA LEU LEU GLN SER GLY LEU TYR THR SEQRES 15 B 221 MET SER SER SER VAL THR VAL PRO SER SER THR TRP PRO SEQRES 16 B 221 SER GLN THR VAL THR CYS SER VAL ALA HIS PRO ALA SER SEQRES 17 B 221 SER THR THR VAL ASP LYS LYS LEU GLU PRO SER GLY PRO SEQRES 1 C 214 ASP ILE VAL MET THR GLN SER HIS LYS PHE MET SER THR SEQRES 2 C 214 SER VAL GLY ASP ARG VAL SER ILE THR CYS LYS ALA SER SEQRES 3 C 214 GLN ASP VAL SER THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 C 214 PRO GLY GLN SER PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 C 214 TYR ARG TYR THR GLY VAL PRO ASP ARG PHE THR GLY SER SEQRES 6 C 214 GLY SER GLY THR ASP PHE THR PHE THR ILE SER SER VAL SEQRES 7 C 214 GLN ALA GLU ASP LEU ALA VAL TYR TYR CYS GLN GLN HIS SEQRES 8 C 214 TYR SER ILE PRO ARG THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 C 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 C 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 C 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 C 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 C 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 C 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 C 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 C 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 C 214 PHE ASN ARG ASN GLU CYS HET 69D A 700 24 HET NAG A 701 14 HET CLR A 702 28 HET D12 A 703 12 HET HEX A 704 6 HET NAG A 705 14 HETNAM 69D (1S)-1-(4-BROMOPHENYL)-1-[3-(DIMETHYLAMINO)PROPYL]-1,3- HETNAM 2 69D DIHYDRO-2-BENZOFURAN-5-CARBONITRILE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CLR CHOLESTEROL HETNAM D12 DODECANE HETNAM HEX HEXANE FORMUL 4 69D C20 H21 BR N2 O FORMUL 5 NAG 2(C8 H15 N O6) FORMUL 6 CLR C27 H46 O FORMUL 7 D12 C12 H26 FORMUL 8 HEX C6 H14 HELIX 1 AA1 LYS A 84 VAL A 97 1 14 HELIX 2 AA2 ASP A 98 TRP A 103 1 6 HELIX 3 AA3 TRP A 103 ASN A 112 1 10 HELIX 4 AA4 GLY A 113 ALA A 116 5 4 HELIX 5 AA5 PHE A 117 PHE A 127 1 11 HELIX 6 AA6 GLY A 128 ARG A 144 1 17 HELIX 7 AA7 ILE A 148 LYS A 153 1 6 HELIX 8 AA8 CYS A 155 ILE A 157 5 3 HELIX 9 AA9 PHE A 158 SER A 189 1 32 HELIX 10 AB1 SER A 190 THR A 192 5 3 HELIX 11 AB2 SER A 226 HIS A 235 1 10 HELIX 12 AB3 GLN A 238 SER A 242 5 5 HELIX 13 AB4 SER A 252 PHE A 268 1 17 HELIX 14 AB5 GLY A 273 VAL A 280 1 8 HELIX 15 AB6 VAL A 280 THR A 301 1 22 HELIX 16 AB7 ALA A 305 LYS A 314 1 10 HELIX 17 AB8 GLU A 322 GLY A 338 1 17 HELIX 18 AB9 GLY A 342 TYR A 350 1 9 HELIX 19 AC1 ASN A 356 ARG A 390 1 35 HELIX 20 AC2 ASP A 393 ALA A 398 1 6 HELIX 21 AC3 GLY A 402 ILE A 408 1 7 HELIX 22 AC4 ILE A 408 ASN A 416 1 9 HELIX 23 AC5 ALA A 419 PHE A 454 1 36 HELIX 24 AC6 ARG A 461 SER A 477 1 17 HELIX 25 AC7 GLY A 484 ALA A 496 1 13 HELIX 26 AC8 ALA A 496 PHE A 515 1 20 HELIX 27 AC9 GLY A 517 LEU A 529 1 13 HELIX 28 AD1 GLY A 534 ALA A 543 1 10 HELIX 29 AD2 ALA A 543 SER A 559 1 17 HELIX 30 AD3 TRP A 573 ILE A 587 1 15 HELIX 31 AD4 ILE A 587 THR A 600 1 14 HELIX 32 AD5 THR A 603 THR A 613 1 11 HELIX 33 AD6 THR B 47 TYR B 51 5 5 HELIX 34 AD7 THR B 106 SER B 110 5 5 HELIX 35 AD8 SER B 181 SER B 183 5 3 HELIX 36 AD9 GLN C 99 LEU C 103 5 5 HELIX 37 AE1 SER C 141 SER C 147 1 7 HELIX 38 AE2 LYS C 203 GLU C 207 1 5 SHEET 1 AA1 2 ARG A 564 LEU A 565 0 SHEET 2 AA1 2 TYR A 568 ASN A 569 -1 O TYR A 568 N LEU A 565 SHEET 1 AA2 4 GLN B 22 GLN B 25 0 SHEET 2 AA2 4 VAL B 37 SER B 44 -1 O LYS B 42 N GLN B 24 SHEET 3 AA2 4 THR B 97 LEU B 102 -1 O LEU B 102 N VAL B 37 SHEET 4 AA2 4 ALA B 87 ASP B 92 -1 N THR B 90 O TYR B 99 SHEET 1 AA3 6 GLU B 29 VAL B 31 0 SHEET 2 AA3 6 THR B 132 VAL B 136 1 O THR B 135 N GLU B 29 SHEET 3 AA3 6 ALA B 111 SER B 118 -1 N TYR B 113 O THR B 132 SHEET 4 AA3 6 TYR B 52 GLN B 58 -1 N GLN B 58 O VAL B 112 SHEET 5 AA3 6 LEU B 64 ASN B 71 -1 O ILE B 67 N TRP B 55 SHEET 6 AA3 6 GLY B 76 TYR B 79 -1 O SER B 78 N ASN B 69 SHEET 1 AA4 4 GLU B 29 VAL B 31 0 SHEET 2 AA4 4 THR B 132 VAL B 136 1 O THR B 135 N GLU B 29 SHEET 3 AA4 4 ALA B 111 SER B 118 -1 N TYR B 113 O THR B 132 SHEET 4 AA4 4 TYR B 127 TRP B 128 -1 O TYR B 127 N ARG B 117 SHEET 1 AA5 4 SER B 145 LEU B 149 0 SHEET 2 AA5 4 SER B 160 TYR B 170 -1 O LYS B 168 N SER B 145 SHEET 3 AA5 4 LEU B 199 PRO B 209 -1 O TYR B 200 N TYR B 170 SHEET 4 AA5 4 HIS B 189 GLN B 196 -1 N HIS B 189 O SER B 205 SHEET 1 AA6 3 THR B 176 TRP B 179 0 SHEET 2 AA6 3 THR B 219 HIS B 224 -1 O SER B 221 N THR B 178 SHEET 3 AA6 3 THR B 229 LYS B 234 -1 O LYS B 233 N CYS B 220 SHEET 1 AA7 5 PHE C 30 SER C 34 0 SHEET 2 AA7 5 THR C 122 LYS C 127 1 O LYS C 127 N THR C 33 SHEET 3 AA7 5 VAL C 105 GLN C 110 -1 N TYR C 106 O THR C 122 SHEET 4 AA7 5 ALA C 54 GLN C 58 -1 N GLN C 58 O VAL C 105 SHEET 5 AA7 5 PRO C 64 TYR C 69 -1 O LYS C 65 N GLN C 57 SHEET 1 AA8 4 PHE C 30 SER C 34 0 SHEET 2 AA8 4 THR C 122 LYS C 127 1 O LYS C 127 N THR C 33 SHEET 3 AA8 4 VAL C 105 GLN C 110 -1 N TYR C 106 O THR C 122 SHEET 4 AA8 4 THR C 117 PHE C 118 -1 O THR C 117 N GLN C 110 SHEET 1 AA9 3 VAL C 39 LYS C 44 0 SHEET 2 AA9 3 ASP C 90 ILE C 95 -1 O ILE C 95 N VAL C 39 SHEET 3 AA9 3 PHE C 82 SER C 85 -1 N THR C 83 O THR C 94 SHEET 1 AB1 4 THR C 134 PHE C 138 0 SHEET 2 AB1 4 GLY C 149 PHE C 159 -1 O ASN C 157 N THR C 134 SHEET 3 AB1 4 TYR C 193 THR C 202 -1 O SER C 197 N CYS C 154 SHEET 4 AB1 4 VAL C 179 TRP C 183 -1 N LEU C 180 O THR C 198 SHEET 1 AB2 3 ASN C 165 LYS C 169 0 SHEET 2 AB2 3 TYR C 212 THR C 217 -1 O GLU C 215 N LYS C 167 SHEET 3 AB2 3 ILE C 225 PHE C 229 -1 O LYS C 227 N CYS C 214 SSBOND 1 CYS A 200 CYS A 209 1555 1555 2.03 SSBOND 2 CYS B 41 CYS B 115 1555 1555 2.03 SSBOND 3 CYS B 153 CYS C 234 1555 1555 2.03 SSBOND 4 CYS B 165 CYS B 220 1555 1555 2.03 SSBOND 5 CYS C 43 CYS C 108 1555 1555 2.03 SSBOND 6 CYS C 154 CYS C 214 1555 1555 2.03 LINK ND2 ASN A 208 C1 NAG A 701 1555 1555 1.44 LINK ND2 ASN A 217 C1 NAG A 705 1555 1555 1.44 CISPEP 1 GLY A 249 GLY A 250 0 -1.21 CISPEP 2 ARG B 121 PRO B 122 0 -7.71 CISPEP 3 PHE B 171 PRO B 172 0 -6.77 CISPEP 4 SER B 183 LEU B 184 0 -0.39 CISPEP 5 TRP B 213 PRO B 214 0 -9.65 CISPEP 6 ILE C 114 PRO C 115 0 -6.13 CISPEP 7 TYR C 160 PRO C 161 0 1.13 CRYST1 129.590 164.000 140.170 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007717 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006098 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007134 0.00000