PDB Short entry for 5IWG HEADER HYDROLASE 22-MAR-16 5IWG TITLE HDAC2 WITH LIGAND BRD4884 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEACETYLASE 2; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: HD2; COMPND 5 EC: 3.5.1.98; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HDAC2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HDAC HISTONE DEACETYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.STEINBACHER REVDAT 2 06-MAR-24 5IWG 1 JRNL REMARK LINK REVDAT 1 31-AUG-16 5IWG 0 JRNL AUTH F.F.WAGNER,M.WEIWER,S.STEINBACHER,A.SCHOMBURG,P.REINEMER, JRNL AUTH 2 J.P.GALE,A.J.CAMPBELL,S.L.FISHER,W.N.ZHAO,S.A.REIS, JRNL AUTH 3 K.M.HENNIG,M.THOMAS,P.MULLER,M.R.JEFSON,D.M.FASS, JRNL AUTH 4 S.J.HAGGARTY,Y.L.ZHANG,E.B.HOLSON JRNL TITL KINETIC AND STRUCTURAL INSIGHTS INTO THE BINDING OF HISTONE JRNL TITL 2 DEACETYLASE 1 AND 2 (HDAC1, 2) INHIBITORS. JRNL REF BIOORG.MED.CHEM. V. 24 4008 2016 JRNL REFN ESSN 1464-3391 JRNL PMID 27377864 JRNL DOI 10.1016/J.BMC.2016.06.040 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 138529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.300 REMARK 3 FREE R VALUE TEST SET COUNT : 3303 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10427 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 244 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8866 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 158 REMARK 3 SOLVENT ATOMS : 697 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.34000 REMARK 3 B22 (A**2) : 0.75000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.099 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.094 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.172 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9273 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 8606 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12493 ; 1.409 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 19831 ; 1.196 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1105 ; 6.215 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 453 ;36.786 ;23.775 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1555 ;10.779 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;18.303 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1268 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10501 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2254 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4417 ; 0.580 ; 1.208 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4416 ; 0.579 ; 1.207 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5523 ; 0.965 ; 2.033 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 5524 ; 0.966 ; 2.034 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4856 ; 1.077 ; 1.477 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4856 ; 1.075 ; 1.477 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6971 ; 1.697 ; 2.367 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10957 ; 5.758 ; 6.372 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 10628 ; 5.539 ; 5.944 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 379 REMARK 3 ORIGIN FOR THE GROUP (A): 59.0320 26.3020 -1.3480 REMARK 3 T TENSOR REMARK 3 T11: 0.0610 T22: 0.0645 REMARK 3 T33: 0.0649 T12: -0.0232 REMARK 3 T13: 0.0219 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.7375 L22: 1.2023 REMARK 3 L33: 1.3685 L12: -0.2092 REMARK 3 L13: -0.3271 L23: 0.1212 REMARK 3 S TENSOR REMARK 3 S11: -0.0262 S12: -0.0405 S13: -0.0249 REMARK 3 S21: -0.0431 S22: -0.0093 S23: -0.0103 REMARK 3 S31: 0.0356 S32: 0.0414 S33: 0.0355 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 14 B 379 REMARK 3 ORIGIN FOR THE GROUP (A): 93.1240 38.5450 -36.6050 REMARK 3 T TENSOR REMARK 3 T11: 0.0300 T22: 0.0158 REMARK 3 T33: 0.0441 T12: 0.0152 REMARK 3 T13: -0.0022 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.4298 L22: 0.8728 REMARK 3 L33: 1.3107 L12: 0.4200 REMARK 3 L13: -0.0398 L23: -0.0434 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: 0.0430 S13: -0.0051 REMARK 3 S21: 0.0067 S22: -0.0079 S23: -0.0419 REMARK 3 S31: -0.0229 S32: 0.0724 S33: 0.0103 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 14 C 379 REMARK 3 ORIGIN FOR THE GROUP (A): 49.4850 23.3930 -47.3780 REMARK 3 T TENSOR REMARK 3 T11: 0.1108 T22: 0.1253 REMARK 3 T33: 0.1318 T12: 0.0271 REMARK 3 T13: -0.0288 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 1.7431 L22: 1.4130 REMARK 3 L33: 1.0313 L12: -0.1619 REMARK 3 L13: 0.2699 L23: 0.2495 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: 0.1658 S13: -0.0632 REMARK 3 S21: -0.1959 S22: -0.0877 S23: 0.1543 REMARK 3 S31: -0.0469 S32: -0.0512 S33: 0.0357 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5IWG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : KB MIRROR PAIR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 141832 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 80.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.33000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, POTASSIUM PHOSPHATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.14850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.62500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.00650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.62500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.14850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.00650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 12 REMARK 465 LYS B 13 REMARK 465 GLY C 12 REMARK 465 LYS C 13 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 31 CD OE1 NE2 REMARK 480 LYS A 55 CD CE NZ REMARK 480 LYS A 71 CE NZ REMARK 480 GLU A 76 CG CD OE1 OE2 REMARK 480 LYS A 149 CE NZ REMARK 480 GLU A 208 CG CD OE1 OE2 REMARK 480 LYS A 223 CE NZ REMARK 480 GLN A 244 CG CD OE1 NE2 REMARK 480 LYS A 247 NZ REMARK 480 LYS A 252 NZ REMARK 480 LYS A 288 CE NZ REMARK 480 GLN A 369 CD OE1 NE2 REMARK 480 LYS B 15 CE NZ REMARK 480 GLN B 31 CD OE1 NE2 REMARK 480 LYS B 55 CD CE NZ REMARK 480 ARG B 60 CZ NH1 NH2 REMARK 480 ARG B 82 NE CZ NH1 NH2 REMARK 480 LYS B 94 CD CE NZ REMARK 480 GLU B 103 CD OE1 OE2 REMARK 480 ARG B 131 CZ NH1 NH2 REMARK 480 GLU B 208 CG CD OE1 OE2 REMARK 480 LYS B 223 CD CE NZ REMARK 480 LYS C 14 CE NZ REMARK 480 ARG C 54 CD NE CZ NH1 NH2 REMARK 480 ARG C 60 CZ NH1 NH2 REMARK 480 LYS C 63 NZ REMARK 480 LYS C 94 CE NZ REMARK 480 GLU C 103 CD OE1 OE2 REMARK 480 GLU C 208 CG CD OE1 OE2 REMARK 480 LYS C 223 CE NZ REMARK 480 GLU C 240 CG CD OE1 OE2 REMARK 480 GLN C 244 CG CD OE1 NE2 REMARK 480 ARG C 275 CG CD NE CZ NH1 NH2 REMARK 480 LYS C 284 CD CE NZ REMARK 480 ASP C 326 CG OD1 OD2 REMARK 480 LYS C 366 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 234 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 103 -94.51 -128.73 REMARK 500 CYS A 105 78.23 -111.58 REMARK 500 PHE A 155 -0.36 75.98 REMARK 500 CYS A 266 42.65 -107.20 REMARK 500 GLU B 103 -102.82 -111.09 REMARK 500 ASN B 159 83.07 -68.70 REMARK 500 GLU C 103 -99.20 -113.06 REMARK 500 CYS C 266 45.81 -108.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 179 O REMARK 620 2 ASP A 179 OD1 71.4 REMARK 620 3 ASP A 181 O 104.0 101.8 REMARK 620 4 HIS A 183 O 165.8 94.8 82.1 REMARK 620 5 SER A 202 OG 87.3 100.2 157.5 91.6 REMARK 620 6 PHE A 203 O 75.5 144.5 73.8 118.7 90.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 181 OD1 REMARK 620 2 HIS A 183 ND1 100.0 REMARK 620 3 ASP A 269 OD2 104.1 97.8 REMARK 620 4 IWX A 403 N10 100.9 113.4 135.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 192 O REMARK 620 2 THR A 195 O 77.2 REMARK 620 3 VAL A 198 O 116.3 81.4 REMARK 620 4 TYR A 227 O 157.5 121.5 81.2 REMARK 620 5 HOH A 562 O 90.5 95.3 151.1 76.2 REMARK 620 6 HOH A 583 O 73.5 150.4 116.0 86.2 80.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 179 O REMARK 620 2 ASP B 179 OD1 72.6 REMARK 620 3 ASP B 181 O 105.6 102.9 REMARK 620 4 HIS B 183 O 164.4 92.6 82.1 REMARK 620 5 SER B 202 OG 86.7 101.0 155.5 91.5 REMARK 620 6 PHE B 203 O 76.3 146.6 73.7 119.2 89.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 181 OD1 REMARK 620 2 HIS B 183 ND1 100.0 REMARK 620 3 ASP B 269 OD2 105.7 100.3 REMARK 620 4 IWX B 403 N10 101.2 109.3 135.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 192 O REMARK 620 2 THR B 195 O 77.2 REMARK 620 3 VAL B 198 O 116.7 80.7 REMARK 620 4 TYR B 227 O 157.7 121.1 81.0 REMARK 620 5 HOH B 585 O 90.9 95.3 149.9 75.7 REMARK 620 6 HOH B 590 O 74.1 151.2 114.8 86.4 82.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 179 O REMARK 620 2 ASP C 179 OD1 72.8 REMARK 620 3 ASP C 181 O 104.7 102.4 REMARK 620 4 HIS C 183 O 165.6 93.5 82.0 REMARK 620 5 SER C 202 OG 87.0 100.0 157.0 91.3 REMARK 620 6 PHE C 203 O 77.0 147.6 74.1 117.3 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 181 OD1 REMARK 620 2 HIS C 183 ND1 97.9 REMARK 620 3 ASP C 269 OD2 106.5 97.6 REMARK 620 4 IWX C 403 N10 101.3 112.6 135.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE C 192 O REMARK 620 2 THR C 195 O 79.2 REMARK 620 3 VAL C 198 O 113.7 78.9 REMARK 620 4 TYR C 227 O 156.5 120.0 85.1 REMARK 620 5 HOH C 555 O 72.3 150.9 117.3 86.8 REMARK 620 6 HOH C 570 O 88.5 95.5 155.2 76.8 78.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IWX A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG5 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IWX B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IWX C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IX0 RELATED DB: PDB DBREF 5IWG A 12 379 UNP Q92769 HDAC2_HUMAN 8 375 DBREF 5IWG B 12 379 UNP Q92769 HDAC2_HUMAN 8 375 DBREF 5IWG C 12 379 UNP Q92769 HDAC2_HUMAN 8 375 SEQRES 1 A 368 GLY LYS LYS LYS VAL CYS TYR TYR TYR ASP GLY ASP ILE SEQRES 2 A 368 GLY ASN TYR TYR TYR GLY GLN GLY HIS PRO MET LYS PRO SEQRES 3 A 368 HIS ARG ILE ARG MET THR HIS ASN LEU LEU LEU ASN TYR SEQRES 4 A 368 GLY LEU TYR ARG LYS MET GLU ILE TYR ARG PRO HIS LYS SEQRES 5 A 368 ALA THR ALA GLU GLU MET THR LYS TYR HIS SER ASP GLU SEQRES 6 A 368 TYR ILE LYS PHE LEU ARG SER ILE ARG PRO ASP ASN MET SEQRES 7 A 368 SER GLU TYR SER LYS GLN MET GLN ARG PHE ASN VAL GLY SEQRES 8 A 368 GLU ASP CYS PRO VAL PHE ASP GLY LEU PHE GLU PHE CYS SEQRES 9 A 368 GLN LEU SER THR GLY GLY SER VAL ALA GLY ALA VAL LYS SEQRES 10 A 368 LEU ASN ARG GLN GLN THR ASP MET ALA VAL ASN TRP ALA SEQRES 11 A 368 GLY GLY LEU HIS HIS ALA LYS LYS SER GLU ALA SER GLY SEQRES 12 A 368 PHE CYS TYR VAL ASN ASP ILE VAL LEU ALA ILE LEU GLU SEQRES 13 A 368 LEU LEU LYS TYR HIS GLN ARG VAL LEU TYR ILE ASP ILE SEQRES 14 A 368 ASP ILE HIS HIS GLY ASP GLY VAL GLU GLU ALA PHE TYR SEQRES 15 A 368 THR THR ASP ARG VAL MET THR VAL SER PHE HIS LYS TYR SEQRES 16 A 368 GLY GLU TYR PHE PRO GLY THR GLY ASP LEU ARG ASP ILE SEQRES 17 A 368 GLY ALA GLY LYS GLY LYS TYR TYR ALA VAL ASN PHE PRO SEQRES 18 A 368 MET ARG ASP GLY ILE ASP ASP GLU SER TYR GLY GLN ILE SEQRES 19 A 368 PHE LYS PRO ILE ILE SER LYS VAL MET GLU MET TYR GLN SEQRES 20 A 368 PRO SER ALA VAL VAL LEU GLN CYS GLY ALA ASP SER LEU SEQRES 21 A 368 SER GLY ASP ARG LEU GLY CYS PHE ASN LEU THR VAL LYS SEQRES 22 A 368 GLY HIS ALA LYS CYS VAL GLU VAL VAL LYS THR PHE ASN SEQRES 23 A 368 LEU PRO LEU LEU MET LEU GLY GLY GLY GLY TYR THR ILE SEQRES 24 A 368 ARG ASN VAL ALA ARG CYS TRP THR TYR GLU THR ALA VAL SEQRES 25 A 368 ALA LEU ASP CYS GLU ILE PRO ASN GLU LEU PRO TYR ASN SEQRES 26 A 368 ASP TYR PHE GLU TYR PHE GLY PRO ASP PHE LYS LEU HIS SEQRES 27 A 368 ILE SER PRO SER ASN MET THR ASN GLN ASN THR PRO GLU SEQRES 28 A 368 TYR MET GLU LYS ILE LYS GLN ARG LEU PHE GLU ASN LEU SEQRES 29 A 368 ARG MET LEU PRO SEQRES 1 B 368 GLY LYS LYS LYS VAL CYS TYR TYR TYR ASP GLY ASP ILE SEQRES 2 B 368 GLY ASN TYR TYR TYR GLY GLN GLY HIS PRO MET LYS PRO SEQRES 3 B 368 HIS ARG ILE ARG MET THR HIS ASN LEU LEU LEU ASN TYR SEQRES 4 B 368 GLY LEU TYR ARG LYS MET GLU ILE TYR ARG PRO HIS LYS SEQRES 5 B 368 ALA THR ALA GLU GLU MET THR LYS TYR HIS SER ASP GLU SEQRES 6 B 368 TYR ILE LYS PHE LEU ARG SER ILE ARG PRO ASP ASN MET SEQRES 7 B 368 SER GLU TYR SER LYS GLN MET GLN ARG PHE ASN VAL GLY SEQRES 8 B 368 GLU ASP CYS PRO VAL PHE ASP GLY LEU PHE GLU PHE CYS SEQRES 9 B 368 GLN LEU SER THR GLY GLY SER VAL ALA GLY ALA VAL LYS SEQRES 10 B 368 LEU ASN ARG GLN GLN THR ASP MET ALA VAL ASN TRP ALA SEQRES 11 B 368 GLY GLY LEU HIS HIS ALA LYS LYS SER GLU ALA SER GLY SEQRES 12 B 368 PHE CYS TYR VAL ASN ASP ILE VAL LEU ALA ILE LEU GLU SEQRES 13 B 368 LEU LEU LYS TYR HIS GLN ARG VAL LEU TYR ILE ASP ILE SEQRES 14 B 368 ASP ILE HIS HIS GLY ASP GLY VAL GLU GLU ALA PHE TYR SEQRES 15 B 368 THR THR ASP ARG VAL MET THR VAL SER PHE HIS LYS TYR SEQRES 16 B 368 GLY GLU TYR PHE PRO GLY THR GLY ASP LEU ARG ASP ILE SEQRES 17 B 368 GLY ALA GLY LYS GLY LYS TYR TYR ALA VAL ASN PHE PRO SEQRES 18 B 368 MET ARG ASP GLY ILE ASP ASP GLU SER TYR GLY GLN ILE SEQRES 19 B 368 PHE LYS PRO ILE ILE SER LYS VAL MET GLU MET TYR GLN SEQRES 20 B 368 PRO SER ALA VAL VAL LEU GLN CYS GLY ALA ASP SER LEU SEQRES 21 B 368 SER GLY ASP ARG LEU GLY CYS PHE ASN LEU THR VAL LYS SEQRES 22 B 368 GLY HIS ALA LYS CYS VAL GLU VAL VAL LYS THR PHE ASN SEQRES 23 B 368 LEU PRO LEU LEU MET LEU GLY GLY GLY GLY TYR THR ILE SEQRES 24 B 368 ARG ASN VAL ALA ARG CYS TRP THR TYR GLU THR ALA VAL SEQRES 25 B 368 ALA LEU ASP CYS GLU ILE PRO ASN GLU LEU PRO TYR ASN SEQRES 26 B 368 ASP TYR PHE GLU TYR PHE GLY PRO ASP PHE LYS LEU HIS SEQRES 27 B 368 ILE SER PRO SER ASN MET THR ASN GLN ASN THR PRO GLU SEQRES 28 B 368 TYR MET GLU LYS ILE LYS GLN ARG LEU PHE GLU ASN LEU SEQRES 29 B 368 ARG MET LEU PRO SEQRES 1 C 368 GLY LYS LYS LYS VAL CYS TYR TYR TYR ASP GLY ASP ILE SEQRES 2 C 368 GLY ASN TYR TYR TYR GLY GLN GLY HIS PRO MET LYS PRO SEQRES 3 C 368 HIS ARG ILE ARG MET THR HIS ASN LEU LEU LEU ASN TYR SEQRES 4 C 368 GLY LEU TYR ARG LYS MET GLU ILE TYR ARG PRO HIS LYS SEQRES 5 C 368 ALA THR ALA GLU GLU MET THR LYS TYR HIS SER ASP GLU SEQRES 6 C 368 TYR ILE LYS PHE LEU ARG SER ILE ARG PRO ASP ASN MET SEQRES 7 C 368 SER GLU TYR SER LYS GLN MET GLN ARG PHE ASN VAL GLY SEQRES 8 C 368 GLU ASP CYS PRO VAL PHE ASP GLY LEU PHE GLU PHE CYS SEQRES 9 C 368 GLN LEU SER THR GLY GLY SER VAL ALA GLY ALA VAL LYS SEQRES 10 C 368 LEU ASN ARG GLN GLN THR ASP MET ALA VAL ASN TRP ALA SEQRES 11 C 368 GLY GLY LEU HIS HIS ALA LYS LYS SER GLU ALA SER GLY SEQRES 12 C 368 PHE CYS TYR VAL ASN ASP ILE VAL LEU ALA ILE LEU GLU SEQRES 13 C 368 LEU LEU LYS TYR HIS GLN ARG VAL LEU TYR ILE ASP ILE SEQRES 14 C 368 ASP ILE HIS HIS GLY ASP GLY VAL GLU GLU ALA PHE TYR SEQRES 15 C 368 THR THR ASP ARG VAL MET THR VAL SER PHE HIS LYS TYR SEQRES 16 C 368 GLY GLU TYR PHE PRO GLY THR GLY ASP LEU ARG ASP ILE SEQRES 17 C 368 GLY ALA GLY LYS GLY LYS TYR TYR ALA VAL ASN PHE PRO SEQRES 18 C 368 MET ARG ASP GLY ILE ASP ASP GLU SER TYR GLY GLN ILE SEQRES 19 C 368 PHE LYS PRO ILE ILE SER LYS VAL MET GLU MET TYR GLN SEQRES 20 C 368 PRO SER ALA VAL VAL LEU GLN CYS GLY ALA ASP SER LEU SEQRES 21 C 368 SER GLY ASP ARG LEU GLY CYS PHE ASN LEU THR VAL LYS SEQRES 22 C 368 GLY HIS ALA LYS CYS VAL GLU VAL VAL LYS THR PHE ASN SEQRES 23 C 368 LEU PRO LEU LEU MET LEU GLY GLY GLY GLY TYR THR ILE SEQRES 24 C 368 ARG ASN VAL ALA ARG CYS TRP THR TYR GLU THR ALA VAL SEQRES 25 C 368 ALA LEU ASP CYS GLU ILE PRO ASN GLU LEU PRO TYR ASN SEQRES 26 C 368 ASP TYR PHE GLU TYR PHE GLY PRO ASP PHE LYS LEU HIS SEQRES 27 C 368 ILE SER PRO SER ASN MET THR ASN GLN ASN THR PRO GLU SEQRES 28 C 368 TYR MET GLU LYS ILE LYS GLN ARG LEU PHE GLU ASN LEU SEQRES 29 C 368 ARG MET LEU PRO HET ZN A 401 1 HET CA A 402 1 HET IWX A 403 23 HET CA A 404 1 HET PG5 A 405 12 HET PGE A 406 10 HET PGE A 407 10 HET ZN B 401 1 HET CA B 402 1 HET IWX B 403 23 HET CA B 404 1 HET PEG B 405 7 HET PEG B 406 7 HET PEG B 407 7 HET PG4 B 408 13 HET ZN C 401 1 HET CA C 402 1 HET IWX C 403 23 HET CA C 404 1 HET PEG C 405 7 HET PEG C 406 7 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM IWX N-(4-AMINO-4'-FLUORO[1,1'-BIPHENYL]-3-YL)OXANE-4- HETNAM 2 IWX CARBOXAMIDE HETNAM PG5 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE HETNAM PGE TRIETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 4 ZN 3(ZN 2+) FORMUL 5 CA 6(CA 2+) FORMUL 6 IWX 3(C18 H19 F N2 O2) FORMUL 8 PG5 C8 H18 O4 FORMUL 9 PGE 2(C6 H14 O4) FORMUL 15 PEG 5(C4 H10 O3) FORMUL 18 PG4 C8 H18 O5 FORMUL 25 HOH *697(H2 O) HELIX 1 AA1 ASP A 23 TYR A 27 5 5 HELIX 2 AA2 PRO A 37 TYR A 50 1 14 HELIX 3 AA3 GLY A 51 MET A 56 5 6 HELIX 4 AA4 THR A 65 THR A 70 1 6 HELIX 5 AA5 SER A 74 ILE A 84 1 11 HELIX 6 AA6 ARG A 85 GLU A 91 5 7 HELIX 7 AA7 TYR A 92 PHE A 99 1 8 HELIX 8 AA8 GLY A 110 ARG A 131 1 22 HELIX 9 AA9 ASN A 159 LEU A 169 1 11 HELIX 10 AB1 GLY A 185 PHE A 192 1 8 HELIX 11 AB2 ALA A 221 LYS A 225 5 5 HELIX 12 AB3 ASP A 238 GLN A 258 1 21 HELIX 13 AB4 GLY A 267 LEU A 271 5 5 HELIX 14 AB5 THR A 282 PHE A 296 1 15 HELIX 15 AB6 THR A 309 LEU A 325 1 17 HELIX 16 AB7 TYR A 338 GLY A 343 5 6 HELIX 17 AB8 THR A 360 ARG A 376 1 17 HELIX 18 AB9 ASP B 23 TYR B 27 5 5 HELIX 19 AC1 PRO B 37 TYR B 50 1 14 HELIX 20 AC2 GLY B 51 MET B 56 5 6 HELIX 21 AC3 THR B 65 THR B 70 1 6 HELIX 22 AC4 SER B 74 ILE B 84 1 11 HELIX 23 AC5 ARG B 85 GLU B 91 5 7 HELIX 24 AC6 TYR B 92 ASN B 100 1 9 HELIX 25 AC7 GLY B 110 ARG B 131 1 22 HELIX 26 AC8 ASN B 159 LEU B 169 1 11 HELIX 27 AC9 GLY B 185 PHE B 192 1 8 HELIX 28 AD1 ALA B 221 LYS B 225 5 5 HELIX 29 AD2 ASP B 238 GLN B 258 1 21 HELIX 30 AD3 GLY B 267 LEU B 271 5 5 HELIX 31 AD4 THR B 282 THR B 295 1 14 HELIX 32 AD5 THR B 309 LEU B 325 1 17 HELIX 33 AD6 TYR B 338 GLY B 343 5 6 HELIX 34 AD7 THR B 360 ARG B 376 1 17 HELIX 35 AD8 ASP C 23 TYR C 27 5 5 HELIX 36 AD9 PRO C 37 TYR C 50 1 14 HELIX 37 AE1 GLY C 51 MET C 56 5 6 HELIX 38 AE2 THR C 65 THR C 70 1 6 HELIX 39 AE3 SER C 74 ILE C 84 1 11 HELIX 40 AE4 ARG C 85 MET C 89 5 5 HELIX 41 AE5 TYR C 92 ASN C 100 1 9 HELIX 42 AE6 GLY C 110 ARG C 131 1 22 HELIX 43 AE7 ASN C 159 LEU C 169 1 11 HELIX 44 AE8 GLY C 185 PHE C 192 1 8 HELIX 45 AE9 ALA C 221 LYS C 225 5 5 HELIX 46 AF1 ASP C 238 GLN C 258 1 21 HELIX 47 AF2 GLY C 267 LEU C 271 5 5 HELIX 48 AF3 THR C 282 THR C 295 1 14 HELIX 49 AF4 THR C 309 LEU C 325 1 17 HELIX 50 AF5 TYR C 338 GLY C 343 5 6 HELIX 51 AF6 THR C 360 ARG C 376 1 17 SHEET 1 AA1 8 GLU A 57 TYR A 59 0 SHEET 2 AA1 8 VAL A 16 TYR A 19 1 N TYR A 18 O TYR A 59 SHEET 3 AA1 8 MET A 136 ASN A 139 1 O VAL A 138 N TYR A 19 SHEET 4 AA1 8 LEU A 300 LEU A 303 1 O MET A 302 N ALA A 137 SHEET 5 AA1 8 ALA A 261 GLN A 265 1 N LEU A 264 O LEU A 301 SHEET 6 AA1 8 VAL A 175 ASP A 179 1 N ILE A 178 O GLN A 265 SHEET 7 AA1 8 VAL A 198 LYS A 205 1 O MET A 199 N TYR A 177 SHEET 8 AA1 8 ALA A 228 MET A 233 1 O VAL A 229 N THR A 200 SHEET 1 AA2 8 GLU B 57 TYR B 59 0 SHEET 2 AA2 8 VAL B 16 TYR B 19 1 N TYR B 18 O TYR B 59 SHEET 3 AA2 8 MET B 136 ASN B 139 1 O VAL B 138 N TYR B 19 SHEET 4 AA2 8 LEU B 300 LEU B 303 1 O MET B 302 N ALA B 137 SHEET 5 AA2 8 ALA B 261 GLN B 265 1 N LEU B 264 O LEU B 301 SHEET 6 AA2 8 VAL B 175 ASP B 179 1 N ILE B 178 O GLN B 265 SHEET 7 AA2 8 VAL B 198 LYS B 205 1 O MET B 199 N TYR B 177 SHEET 8 AA2 8 ALA B 228 MET B 233 1 O VAL B 229 N THR B 200 SHEET 1 AA3 8 GLU C 57 TYR C 59 0 SHEET 2 AA3 8 VAL C 16 TYR C 19 1 N TYR C 18 O TYR C 59 SHEET 3 AA3 8 MET C 136 ASN C 139 1 O VAL C 138 N TYR C 19 SHEET 4 AA3 8 LEU C 300 LEU C 303 1 O MET C 302 N ALA C 137 SHEET 5 AA3 8 ALA C 261 GLN C 265 1 N LEU C 264 O LEU C 303 SHEET 6 AA3 8 VAL C 175 ASP C 179 1 N ILE C 178 O VAL C 263 SHEET 7 AA3 8 VAL C 198 LYS C 205 1 O MET C 199 N TYR C 177 SHEET 8 AA3 8 ALA C 228 MET C 233 1 O VAL C 229 N THR C 200 LINK O ASP A 179 CA CA A 402 1555 1555 3.01 LINK OD1 ASP A 179 CA CA A 402 1555 1555 2.45 LINK OD1 ASP A 181 ZN ZN A 401 1555 1555 1.97 LINK O ASP A 181 CA CA A 402 1555 1555 2.49 LINK ND1 HIS A 183 ZN ZN A 401 1555 1555 2.22 LINK O HIS A 183 CA CA A 402 1555 1555 2.61 LINK O PHE A 192 CA CA A 404 1555 1555 2.47 LINK O THR A 195 CA CA A 404 1555 1555 2.83 LINK O VAL A 198 CA CA A 404 1555 1555 2.54 LINK OG SER A 202 CA CA A 402 1555 1555 2.93 LINK O PHE A 203 CA CA A 402 1555 1555 2.48 LINK O TYR A 227 CA CA A 404 1555 1555 2.99 LINK OD2 ASP A 269 ZN ZN A 401 1555 1555 1.96 LINK ZN ZN A 401 N10 IWX A 403 1555 1555 2.15 LINK CA CA A 404 O HOH A 562 1555 1555 2.44 LINK CA CA A 404 O HOH A 583 1555 1555 2.87 LINK O ASP B 179 CA CA B 402 1555 1555 3.00 LINK OD1 ASP B 179 CA CA B 402 1555 1555 2.51 LINK OD1 ASP B 181 ZN ZN B 401 1555 1555 2.00 LINK O ASP B 181 CA CA B 402 1555 1555 2.49 LINK ND1 HIS B 183 ZN ZN B 401 1555 1555 2.19 LINK O HIS B 183 CA CA B 402 1555 1555 2.65 LINK O PHE B 192 CA CA B 404 1555 1555 2.55 LINK O THR B 195 CA CA B 404 1555 1555 2.78 LINK O VAL B 198 CA CA B 404 1555 1555 2.54 LINK OG SER B 202 CA CA B 402 1555 1555 2.88 LINK O PHE B 203 CA CA B 402 1555 1555 2.48 LINK O TYR B 227 CA CA B 404 1555 1555 2.93 LINK OD2 ASP B 269 ZN ZN B 401 1555 1555 1.94 LINK ZN ZN B 401 N10 IWX B 403 1555 1555 2.15 LINK CA CA B 404 O HOH B 585 1555 1555 2.43 LINK CA CA B 404 O HOH B 590 1555 1555 2.81 LINK O ASP C 179 CA CA C 402 1555 1555 3.00 LINK OD1 ASP C 179 CA CA C 402 1555 1555 2.51 LINK OD1 ASP C 181 ZN ZN C 401 1555 1555 2.04 LINK O ASP C 181 CA CA C 402 1555 1555 2.44 LINK ND1 HIS C 183 ZN ZN C 401 1555 1555 2.32 LINK O HIS C 183 CA CA C 402 1555 1555 2.62 LINK O PHE C 192 CA CA C 404 1555 1555 2.54 LINK O THR C 195 CA CA C 404 1555 1555 2.83 LINK O VAL C 198 CA CA C 404 1555 1555 2.54 LINK OG SER C 202 CA CA C 402 1555 1555 3.01 LINK O PHE C 203 CA CA C 402 1555 1555 2.46 LINK O TYR C 227 CA CA C 404 1555 1555 2.96 LINK OD2 ASP C 269 ZN ZN C 401 1555 1555 1.92 LINK ZN ZN C 401 N10 IWX C 403 1555 1555 2.21 LINK CA CA C 404 O HOH C 555 1555 1555 2.94 LINK CA CA C 404 O HOH C 570 1555 1555 2.40 CISPEP 1 PHE A 210 PRO A 211 0 -4.19 CISPEP 2 GLY A 343 PRO A 344 0 -0.40 CISPEP 3 PHE B 210 PRO B 211 0 -4.45 CISPEP 4 GLY B 343 PRO B 344 0 4.25 CISPEP 5 PHE C 210 PRO C 211 0 -7.40 CISPEP 6 GLY C 343 PRO C 344 0 3.14 SITE 1 AC1 4 ASP A 181 HIS A 183 ASP A 269 IWX A 403 SITE 1 AC2 5 ASP A 179 ASP A 181 HIS A 183 SER A 202 SITE 2 AC2 5 PHE A 203 SITE 1 AC3 20 TYR A 29 MET A 35 ARG A 39 PHE A 114 SITE 2 AC3 20 GLY A 143 LEU A 144 HIS A 145 HIS A 146 SITE 3 AC3 20 GLY A 154 PHE A 155 CYS A 156 ASP A 181 SITE 4 AC3 20 HIS A 183 ASP A 269 LEU A 276 GLY A 305 SITE 5 AC3 20 GLY A 306 TYR A 308 ZN A 401 HOH A 606 SITE 1 AC4 6 PHE A 192 THR A 195 VAL A 198 TYR A 227 SITE 2 AC4 6 HOH A 562 HOH A 583 SITE 1 AC5 3 ARG A 311 GLY A 343 HOH A 630 SITE 1 AC6 3 ASN A 26 TYR A 27 GLY A 110 SITE 1 AC7 2 LYS A 71 ALA A 191 SITE 1 AC8 4 ASP B 181 HIS B 183 ASP B 269 IWX B 403 SITE 1 AC9 5 ASP B 179 ASP B 181 HIS B 183 SER B 202 SITE 2 AC9 5 PHE B 203 SITE 1 AD1 20 TYR B 29 MET B 35 ARG B 39 PHE B 114 SITE 2 AD1 20 GLY B 143 LEU B 144 HIS B 145 HIS B 146 SITE 3 AD1 20 GLY B 154 PHE B 155 CYS B 156 ASP B 181 SITE 4 AD1 20 HIS B 183 PHE B 210 ASP B 269 GLY B 305 SITE 5 AD1 20 GLY B 306 TYR B 308 ZN B 401 HOH B 602 SITE 1 AD2 6 PHE B 192 THR B 195 VAL B 198 TYR B 227 SITE 2 AD2 6 HOH B 585 HOH B 590 SITE 1 AD3 6 LYS B 284 HIS B 349 HOH B 512 HOH B 513 SITE 2 AD3 6 GLU C 67 THR C 70 SITE 1 AD4 3 ASN B 26 TYR B 27 ASP B 109 SITE 1 AD5 2 GLU B 340 GLY B 343 SITE 1 AD6 5 ASN B 354 LEU C 169 TYR C 171 GLN C 173 SITE 2 AD6 5 ARG C 197 SITE 1 AD7 4 ASP C 181 HIS C 183 ASP C 269 IWX C 403 SITE 1 AD8 5 ASP C 179 ASP C 181 HIS C 183 SER C 202 SITE 2 AD8 5 PHE C 203 SITE 1 AD9 22 TYR C 29 MET C 35 ARG C 39 PHE C 114 SITE 2 AD9 22 GLY C 143 LEU C 144 HIS C 145 HIS C 146 SITE 3 AD9 22 GLY C 154 PHE C 155 CYS C 156 ASP C 181 SITE 4 AD9 22 HIS C 183 PHE C 210 ASP C 269 LEU C 276 SITE 5 AD9 22 GLY C 305 GLY C 306 TYR C 308 ZN C 401 SITE 6 AD9 22 HOH C 516 HOH C 617 SITE 1 AE1 6 PHE C 192 THR C 195 VAL C 198 TYR C 227 SITE 2 AE1 6 HOH C 555 HOH C 570 SITE 1 AE2 3 ASP C 23 ASN C 26 TYR C 27 SITE 1 AE3 3 PRO B 344 HOH C 564 HOH C 646 CRYST1 92.297 98.013 139.250 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007181 0.00000