PDB Short entry for 5JQS HEADER HYDROLASE 05-MAY-16 5JQS TITLE CRYSTAL STRUCTURE OF DEUBIQUITINASE MINDY-1 IN COMPLEX WITH UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FAM63A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: UBIQUITIN-40S RIBOSOMAL PROTEIN S27A; COMPND 7 CHAIN: D; COMPND 8 SYNONYM: UBIQUITIN CARBOXYL EXTENSION PROTEIN 80; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FAM63A, KIAA1390; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 12 ORGANISM_COMMON: BOVINE; SOURCE 13 ORGANISM_TAXID: 9913; SOURCE 14 CELL: ERYTHROCYTES; SOURCE 15 GENE: RPS27A, UBA80, UBCEP1; SOURCE 16 EXPRESSION_SYSTEM: BOS TAURUS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9913 KEYWDS HYDROLASE, CYSTEINE PROTEASE, ISOPEPTIDASE AND UBIQUITIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR S.A.ABDUL REHMAN,Y.KULATHU REVDAT 4 07-FEB-24 5JQS 1 LINK REVDAT 3 20-JUL-16 5JQS 1 JRNL REVDAT 2 29-JUN-16 5JQS 1 JRNL REVDAT 1 22-JUN-16 5JQS 0 JRNL AUTH S.A.ABDUL REHMAN,Y.A.KRISTARIYANTO,S.Y.CHOI,P.J.NKOSI, JRNL AUTH 2 S.WEIDLICH,K.LABIB,K.HOFMANN,Y.KULATHU JRNL TITL MINDY-1 IS A MEMBER OF AN EVOLUTIONARILY CONSERVED AND JRNL TITL 2 STRUCTURALLY DISTINCT NEW FAMILY OF DEUBIQUITINATING JRNL TITL 3 ENZYMES. JRNL REF MOL.CELL V. 63 146 2016 JRNL REFN ISSN 1097-2765 JRNL PMID 27292798 JRNL DOI 10.1016/J.MOLCEL.2016.05.009 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20406 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.270 REMARK 3 FREE R VALUE TEST SET COUNT : 1076 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6380 - 5.2980 0.99 2657 137 0.2312 0.2279 REMARK 3 2 5.2980 - 4.2059 1.00 2456 141 0.1691 0.1868 REMARK 3 3 4.2059 - 3.6745 1.00 2404 161 0.1685 0.2030 REMARK 3 4 3.6745 - 3.3386 1.00 2391 129 0.1963 0.2137 REMARK 3 5 3.3386 - 3.0994 1.00 2369 133 0.2282 0.2921 REMARK 3 6 3.0994 - 2.9167 1.00 2362 124 0.2342 0.3416 REMARK 3 7 2.9167 - 2.7706 1.00 2357 129 0.2376 0.2743 REMARK 3 8 2.7706 - 2.6500 1.00 2334 122 0.2692 0.3232 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3166 REMARK 3 ANGLE : 1.104 4309 REMARK 3 CHIRALITY : 0.046 510 REMARK 3 PLANARITY : 0.005 547 REMARK 3 DIHEDRAL : 14.659 1130 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JQS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221079. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97623 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED CHANNEL REMARK 200 -CUT SILICON MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20518 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 48.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 0.59500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5JKN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES, 10% DIOXANE AND 1.6 M REMARK 280 AMMONIUM SULPHATE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 221.64267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.82133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 166.23200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.41067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 277.05333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 221.64267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 110.82133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 55.41067 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 166.23200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 277.05333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 96 REMARK 465 PRO A 97 REMARK 465 LEU A 98 REMARK 465 GLY A 99 REMARK 465 SER A 100 REMARK 465 PRO A 101 REMARK 465 GLU A 102 REMARK 465 PHE A 103 REMARK 465 PRO A 104 REMARK 465 GLY A 105 REMARK 465 ARG A 106 REMARK 465 LEU A 107 REMARK 465 GLU A 108 REMARK 465 MET A 109 REMARK 465 GLU A 110 REMARK 465 GLU A 181 REMARK 465 LYS A 182 REMARK 465 SER A 183 REMARK 465 GLU A 184 REMARK 465 GLY A 185 REMARK 465 LEU A 186 REMARK 465 HIS A 368 REMARK 465 SER A 369 REMARK 465 LEU A 370 REMARK 465 GLY A 371 REMARK 465 LYS A 372 REMARK 465 GLY A 373 REMARK 465 PRO A 374 REMARK 465 GLY A 375 REMARK 465 ALA A 376 REMARK 465 GLU A 377 REMARK 465 GLY A 378 REMARK 465 GLY A 379 REMARK 465 SER A 380 REMARK 465 GLY A 381 REMARK 465 SER A 382 REMARK 465 PRO A 383 REMARK 465 GLU A 384 REMARK 465 GLY D 76 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 133 OG1 CG2 REMARK 470 ASN A 134 CG OD1 ND2 REMARK 470 LYS A 178 CE NZ REMARK 470 GLN A 180 CG CD OE1 NE2 REMARK 470 GLN A 187 OE1 NE2 REMARK 470 LEU A 188 CG CD1 CD2 REMARK 470 GLN A 192 CG CD OE1 NE2 REMARK 470 LYS A 203 CE NZ REMARK 470 GLU A 248 CG CD OE1 OE2 REMARK 470 GLN A 344 CG CD OE1 NE2 REMARK 470 ASN A 352 CG OD1 ND2 REMARK 470 ASP A 356 CG OD1 OD2 REMARK 470 GLN D 2 CG CD OE1 NE2 REMARK 470 LYS D 11 CG CD CE NZ REMARK 470 GLU D 18 CG CD OE1 OE2 REMARK 470 GLU D 24 CG CD OE1 OE2 REMARK 470 ASN D 25 CG OD1 ND2 REMARK 470 LYS D 29 CG CD CE NZ REMARK 470 GLN D 49 CG CD OE1 NE2 REMARK 470 LEU D 50 CG CD1 CD2 REMARK 470 ARG D 54 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 63 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 156 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 132 -160.09 -65.57 REMARK 500 SER A 132 -160.09 -74.82 REMARK 500 GLU D 34 -8.63 -150.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AYE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 101 DBREF 5JQS A 110 384 UNP Q8N5J2 FA63A_HUMAN 110 384 DBREF 5JQS D 1 76 UNP P62992 RS27A_BOVIN 1 76 SEQADV 5JQS GLY A 96 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS PRO A 97 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS LEU A 98 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS GLY A 99 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS SER A 100 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS PRO A 101 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS GLU A 102 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS PHE A 103 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS PRO A 104 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS GLY A 105 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS ARG A 106 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS LEU A 107 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS GLU A 108 UNP Q8N5J2 EXPRESSION TAG SEQADV 5JQS MET A 109 UNP Q8N5J2 EXPRESSION TAG SEQRES 1 A 289 GLY PRO LEU GLY SER PRO GLU PHE PRO GLY ARG LEU GLU SEQRES 2 A 289 MET GLU PRO ASP PHE TYR CYS VAL LYS TRP ILE PRO TRP SEQRES 3 A 289 LYS GLY GLU GLN THR PRO ILE ILE THR GLN SER THR ASN SEQRES 4 A 289 GLY PRO CYS PRO LEU LEU ALA ILE MET ASN ILE LEU PHE SEQRES 5 A 289 LEU GLN TRP LYS VAL LYS LEU PRO PRO GLN LYS GLU VAL SEQRES 6 A 289 ILE THR SER ASP GLU LEU MET ALA HIS LEU GLY ASN CYS SEQRES 7 A 289 LEU LEU SER ILE LYS PRO GLN GLU LYS SER GLU GLY LEU SEQRES 8 A 289 GLN LEU ASN PHE GLN GLN ASN VAL ASP ASP ALA MET THR SEQRES 9 A 289 VAL LEU PRO LYS LEU ALA THR GLY LEU ASP VAL ASN VAL SEQRES 10 A 289 ARG PHE THR GLY VAL SER ASP PHE GLU TYR THR PRO GLU SEQRES 11 A 289 CYS SER VAL PHE ASP LEU LEU GLY ILE PRO LEU TYR HIS SEQRES 12 A 289 GLY TRP LEU VAL ASP PRO GLN SER PRO GLU ALA VAL ARG SEQRES 13 A 289 ALA VAL GLY LYS LEU SER TYR ASN GLN LEU VAL GLU ARG SEQRES 14 A 289 ILE ILE THR CYS LYS HIS SER SER ASP THR ASN LEU VAL SEQRES 15 A 289 THR GLU GLY LEU ILE ALA GLU GLN PHE LEU GLU THR THR SEQRES 16 A 289 ALA ALA GLN LEU THR TYR HIS GLY LEU CYS GLU LEU THR SEQRES 17 A 289 ALA ALA ALA LYS GLU GLY GLU LEU SER VAL PHE PHE ARG SEQRES 18 A 289 ASN ASN HIS PHE SER THR MET THR LYS HIS LYS SER HIS SEQRES 19 A 289 LEU TYR LEU LEU VAL THR ASP GLN GLY PHE LEU GLN GLU SEQRES 20 A 289 GLU GLN VAL VAL TRP GLU SER LEU HIS ASN VAL ASP GLY SEQRES 21 A 289 ASP SER CYS PHE CYS ASP SER ASP PHE HIS LEU SER HIS SEQRES 22 A 289 SER LEU GLY LYS GLY PRO GLY ALA GLU GLY GLY SER GLY SEQRES 23 A 289 SER PRO GLU SEQRES 1 D 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 D 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 D 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 D 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 D 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 D 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY HET AYE A 401 4 HET SO4 A 402 5 HET SO4 A 403 5 HET CL A 404 1 HET DIO A 405 6 HET SO4 D 101 5 HETNAM AYE PROP-2-EN-1-AMINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM DIO 1,4-DIETHYLENE DIOXIDE HETSYN AYE ALLYLAMINE FORMUL 3 AYE C3 H7 N FORMUL 4 SO4 3(O4 S 2-) FORMUL 6 CL CL 1- FORMUL 7 DIO C4 H8 O2 FORMUL 9 HOH *53(H2 O) HELIX 1 AA1 PRO A 136 GLN A 149 1 14 HELIX 2 AA2 SER A 163 LEU A 175 1 13 HELIX 3 AA3 LEU A 188 GLY A 207 1 20 HELIX 4 AA4 THR A 223 LEU A 232 1 10 HELIX 5 AA5 SER A 246 GLY A 254 1 9 HELIX 6 AA6 SER A 257 SER A 271 1 15 HELIX 7 AA7 ASP A 273 THR A 290 1 18 HELIX 8 AA8 THR A 295 ALA A 306 1 12 HELIX 9 AA9 ASP A 336 LEU A 340 5 5 HELIX 10 AB1 THR D 22 GLY D 35 1 14 SHEET 1 AA1 3 GLU A 124 ILE A 129 0 SHEET 2 AA1 3 PHE A 113 TRP A 121 -1 N LYS A 117 O ILE A 128 SHEET 3 AA1 3 VAL A 160 THR A 162 -1 O ILE A 161 N TYR A 114 SHEET 1 AA2 2 LEU A 208 VAL A 210 0 SHEET 2 AA2 2 LEU D 73 GLY D 75 -1 O GLY D 75 N LEU A 208 SHEET 1 AA3 6 LEU A 236 TYR A 237 0 SHEET 2 AA3 6 LEU A 311 ARG A 316 1 O VAL A 313 N TYR A 237 SHEET 3 AA3 6 HIS A 319 HIS A 326 -1 O MET A 323 N SER A 312 SHEET 4 AA3 6 HIS A 329 LEU A 333 -1 O HIS A 329 N HIS A 326 SHEET 5 AA3 6 TRP A 347 SER A 349 -1 O GLU A 348 N LEU A 332 SHEET 6 AA3 6 PHE A 359 CYS A 360 -1 O CYS A 360 N TRP A 347 SHEET 1 AA4 5 THR D 12 GLU D 16 0 SHEET 2 AA4 5 GLN D 2 LYS D 6 -1 N VAL D 5 O ILE D 13 SHEET 3 AA4 5 THR D 66 LEU D 69 1 O LEU D 67 N PHE D 4 SHEET 4 AA4 5 LEU D 43 PHE D 45 -1 N ILE D 44 O HIS D 68 SHEET 5 AA4 5 LYS D 48 GLN D 49 -1 O LYS D 48 N PHE D 45 LINK SG CYS A 137 C2 AYE A 401 1555 1555 1.67 LINK N1 AYE A 401 C GLY D 75 1555 1555 1.55 CISPEP 1 ASN A 352 VAL A 353 0 -6.12 SITE 1 AC1 7 GLN A 131 GLY A 135 CYS A 137 ASN A 318 SITE 2 AC1 7 HIS A 319 HOH A 509 GLY D 75 SITE 1 AC2 3 LYS A 307 GLU A 308 LYS A 325 SITE 1 AC3 2 ARG A 264 LEU A 276 SITE 1 AC4 3 GLN A 149 GLY A 309 LEU A 311 SITE 1 AC5 1 THR A 303 SITE 1 AC6 2 HOH A 508 ARG D 72 CRYST1 82.336 82.336 332.464 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012145 0.007012 0.000000 0.00000 SCALE2 0.000000 0.014024 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003008 0.00000