PDB Short entry for 5JW7 HEADER LIGASE 11-MAY-16 5JW7 TITLE CRYSTAL STRUCTURE OF SOPA-TRIM56 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE SOPA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SALMONELLA OUTER PROTEIN A,SECRETED EFFECTOR PROTEIN SOPA; COMPND 5 EC: 6.3.2.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE TRIM56; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: RING FINGER PROTEIN 109,TRIPARTITE MOTIF-CONTAINING PROTEIN COMPND 11 56; COMPND 12 EC: 6.3.2.-; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: BINDS TO 2 ZN ATOMS. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 90371; SOURCE 5 GENE: SOPA, STM2066; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TRIM56, RNF109; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIQUITINATION, BACTERIAL EFFECTOR, SOPA, TRIM56, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.BHOGARAJU,I.DIKIC REVDAT 2 10-JAN-24 5JW7 1 REMARK REVDAT 1 15-FEB-17 5JW7 0 JRNL AUTH E.FISKIN,S.BHOGARAJU,L.HERHAUS,S.KALAYIL,M.HAHN,I.DIKIC JRNL TITL STRUCTURAL BASIS FOR THE RECOGNITION AND DEGRADATION OF HOST JRNL TITL 2 TRIM PROTEINS BY SALMONELLA EFFECTOR SOPA. JRNL REF NAT COMMUN V. 8 14004 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28084320 JRNL DOI 10.1038/NCOMMS14004 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 7542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4825 - 5.1744 1.00 2574 136 0.2076 0.2416 REMARK 3 2 5.1744 - 4.1080 1.00 2586 131 0.1853 0.2178 REMARK 3 3 4.1080 - 3.5890 1.00 2584 131 0.2346 0.3109 REMARK 3 4 3.5890 - 3.2610 1.00 2541 135 0.2662 0.3826 REMARK 3 5 3.2610 - 3.0273 1.00 2547 137 0.3003 0.3895 REMARK 3 6 3.0273 - 2.8489 0.89 2270 121 0.2846 0.3581 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2446 REMARK 3 ANGLE : 0.973 3346 REMARK 3 CHIRALITY : 0.035 393 REMARK 3 PLANARITY : 0.005 439 REMARK 3 DIHEDRAL : 13.386 851 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JW7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221317. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8375 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.849 REMARK 200 RESOLUTION RANGE LOW (A) : 43.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : 0.07443 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.64 REMARK 200 R MERGE FOR SHELL (I) : 0.83470 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.640 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2QZA, 2CT2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% W/V POLYACRYLATE 2100 SODIUM SALT, REMARK 280 0.2M NACL, 0.1M MES PH 6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.98133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.96267 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 81.96267 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.98133 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 148 REMARK 465 SER A 149 REMARK 465 GLY A 150 REMARK 465 SER A 151 REMARK 465 GLU A 152 REMARK 465 ASN A 153 REMARK 465 LEU A 154 REMARK 465 TYR A 155 REMARK 465 PHE A 156 REMARK 465 GLN A 157 REMARK 465 GLY A 158 REMARK 465 GLY A 159 REMARK 465 SER A 160 REMARK 465 GLY A 161 REMARK 465 SER A 162 REMARK 465 ALA A 163 REMARK 465 THR A 164 REMARK 465 SER A 165 REMARK 465 SER A 166 REMARK 465 LEU A 429 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 SER B 3 REMARK 465 HIS B 4 REMARK 465 GLY B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 PRO B 8 REMARK 465 SER B 9 REMARK 465 LEU B 10 REMARK 465 LEU B 11 REMARK 465 GLU B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 SER B 15 REMARK 465 SER B 16 REMARK 465 ASP B 17 REMARK 465 VAL B 79 REMARK 465 ASN B 80 REMARK 465 GLY B 81 REMARK 465 LEU B 82 REMARK 465 LEU B 83 REMARK 465 ASP B 84 REMARK 465 LEU B 85 REMARK 465 VAL B 86 REMARK 465 LYS B 87 REMARK 465 ALA B 88 REMARK 465 ARG B 89 REMARK 465 ALA B 90 REMARK 465 CYS B 91 REMARK 465 GLY B 92 REMARK 465 ASP B 93 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 175 CG CD CE NZ REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LEU A 182 CG CD1 CD2 REMARK 470 ARG A 183 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 184 CG CD OE1 NE2 REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 ASP A 194 CG OD1 OD2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 ILE A 210 CG1 CG2 CD1 REMARK 470 PHE A 215 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 ARG A 218 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 221 CG OD1 OD2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 ARG A 247 NH1 NH2 REMARK 470 LYS A 262 CG CD CE NZ REMARK 470 GLN A 280 CG CD OE1 NE2 REMARK 470 GLN A 281 CG CD OE1 NE2 REMARK 470 ARG A 386 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 18 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 29 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 32 CG CD CE NZ REMARK 470 GLN B 47 CG CD OE1 NE2 REMARK 470 ARG B 53 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 55 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 60 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 61 CG CD OE1 OE2 REMARK 470 GLU B 68 CG CD OE1 OE2 REMARK 470 PHE B 73 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 PHE B 77 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 78 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 177 H VAL A 181 1.60 REMARK 500 OH TYR A 275 O LYS A 298 2.10 REMARK 500 O MET A 268 OG1 THR A 293 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 184 40.04 -93.79 REMARK 500 ALA A 200 -178.98 -66.13 REMARK 500 GLU A 217 137.65 178.90 REMARK 500 ARG A 218 -134.54 57.28 REMARK 500 ASP A 219 32.12 -95.77 REMARK 500 ASN A 230 18.22 57.03 REMARK 500 TYR A 250 -2.83 73.71 REMARK 500 ASN A 265 42.45 34.42 REMARK 500 ASN A 311 40.42 -81.46 REMARK 500 TYR A 367 50.25 -94.03 REMARK 500 ARG A 386 92.09 -68.88 REMARK 500 ALA A 390 -39.22 -35.14 REMARK 500 CYS B 36 -83.04 -71.92 REMARK 500 LEU B 37 103.01 157.18 REMARK 500 CYS B 59 -80.21 -131.91 REMARK 500 PRO B 66 -75.69 -51.84 REMARK 500 ALA B 71 146.99 78.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS B 36 LEU B 37 126.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 21 SG REMARK 620 2 CYS B 24 SG 93.5 REMARK 620 3 CYS B 41 SG 135.0 102.8 REMARK 620 4 CYS B 44 SG 85.3 120.4 119.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 102 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 36 SG REMARK 620 2 HIS B 38 ND1 94.9 REMARK 620 3 CYS B 56 SG 67.4 133.7 REMARK 620 4 CYS B 59 SG 125.3 117.1 107.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 102 DBREF 5JW7 A 163 425 UNP Q8ZNR3 SOPA_SALTY 163 425 DBREF 5JW7 B 1 93 UNP Q9BRZ2 TRI56_HUMAN 1 93 SEQADV 5JW7 GLY A 148 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 SER A 149 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 GLY A 150 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 SER A 151 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 GLU A 152 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 ASN A 153 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 LEU A 154 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 TYR A 155 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 PHE A 156 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 GLN A 157 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 GLY A 158 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 GLY A 159 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 SER A 160 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 GLY A 161 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 SER A 162 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 LEU A 426 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 GLU A 427 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 ALA A 428 UNP Q8ZNR3 EXPRESSION TAG SEQADV 5JW7 LEU A 429 UNP Q8ZNR3 EXPRESSION TAG SEQRES 1 A 282 GLY SER GLY SER GLU ASN LEU TYR PHE GLN GLY GLY SER SEQRES 2 A 282 GLY SER ALA THR SER SER PRO SER SER PRO ALA ASP TRP SEQRES 3 A 282 ALA LYS LYS LEU THR ASP ALA VAL LEU ARG GLN LYS ALA SEQRES 4 A 282 GLY GLU THR LEU THR ALA ALA ASP ARG ASP PHE SER ASN SEQRES 5 A 282 ALA ASP PHE ARG ASN ILE THR PHE SER LYS ILE LEU PRO SEQRES 6 A 282 PRO SER PHE MET GLU ARG ASP GLY ASP ILE ILE LYS GLY SEQRES 7 A 282 PHE ASN PHE SER ASN SER LYS PHE THR TYR SER ASP ILE SEQRES 8 A 282 SER HIS LEU HIS PHE ASP GLU CYS ARG PHE THR TYR SER SEQRES 9 A 282 THR LEU SER ASP VAL VAL CYS SER ASN THR LYS PHE SER SEQRES 10 A 282 ASN SER ASP MET ASN GLU VAL PHE LEU GLN TYR SER ILE SEQRES 11 A 282 THR THR GLN GLN GLN PRO SER PHE ILE ASP THR THR LEU SEQRES 12 A 282 LYS ASN THR LEU ILE ARG HIS LYS ALA ASN LEU SER GLY SEQRES 13 A 282 VAL ILE LEU ASN GLU PRO ASP ASN SER SER PRO PRO SER SEQRES 14 A 282 VAL SER GLY GLY GLY ASN PHE ILE ARG LEU GLY ASP ILE SEQRES 15 A 282 TRP LEU GLN MET PRO LEU LEU TRP THR GLU ASN ALA VAL SEQRES 16 A 282 ASP GLY PHE LEU ASN HIS GLU HIS ASN ASN GLY LYS SER SEQRES 17 A 282 ILE LEU MET THR ILE ASP SER LEU PRO ASP LYS TYR SER SEQRES 18 A 282 GLN GLU LYS VAL GLN ALA MET GLU ASP LEU VAL LYS SER SEQRES 19 A 282 LEU ARG GLY GLY ARG LEU THR GLU ALA CYS ILE ARG PRO SEQRES 20 A 282 VAL GLU SER SER LEU VAL SER VAL LEU ALA HIS PRO PRO SEQRES 21 A 282 TYR THR GLN SER ALA LEU ILE SER GLU TRP LEU GLY PRO SEQRES 22 A 282 VAL GLN GLU ARG PHE LEU GLU ALA LEU SEQRES 1 B 93 MET VAL SER HIS GLY SER SER PRO SER LEU LEU GLU ALA SEQRES 2 B 93 LEU SER SER ASP PHE LEU ALA CYS LYS ILE CYS LEU GLU SEQRES 3 B 93 GLN LEU ARG ALA PRO LYS THR LEU PRO CYS LEU HIS THR SEQRES 4 B 93 TYR CYS GLN ASP CYS LEU ALA GLN LEU ALA ASP GLY GLY SEQRES 5 B 93 ARG VAL ARG CYS PRO GLU CYS ARG GLU THR VAL PRO VAL SEQRES 6 B 93 PRO PRO GLU GLY VAL ALA SER PHE LYS THR ASN PHE PHE SEQRES 7 B 93 VAL ASN GLY LEU LEU ASP LEU VAL LYS ALA ARG ALA CYS SEQRES 8 B 93 GLY ASP HET ZN B 101 1 HET ZN B 102 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *(H2 O) HELIX 1 AA1 SER A 169 GLN A 184 1 16 HELIX 2 AA2 THR A 191 ASP A 196 1 6 HELIX 3 AA3 THR A 206 LEU A 211 1 6 HELIX 4 AA4 THR A 338 ASN A 347 1 10 HELIX 5 AA5 SER A 355 SER A 362 1 8 HELIX 6 AA6 PRO A 364 LYS A 366 5 3 HELIX 7 AA7 TYR A 367 GLY A 385 1 19 HELIX 8 AA8 THR A 388 ARG A 393 1 6 HELIX 9 AA9 VAL A 395 ALA A 404 1 10 HELIX 10 AB1 SER A 411 GLU A 427 1 17 HELIX 11 AB2 CYS B 41 ALA B 49 1 9 SHEET 1 AA1 4 ILE A 223 LYS A 224 0 SHEET 2 AA1 4 HIS A 242 ASP A 244 1 O ASP A 244 N ILE A 223 SHEET 3 AA1 4 LYS A 262 SER A 264 1 O SER A 264 N PHE A 243 SHEET 4 AA1 4 SER A 284 ILE A 286 1 O ILE A 286 N PHE A 263 SHEET 1 AA2 2 PHE A 272 LEU A 273 0 SHEET 2 AA2 2 LEU A 294 ILE A 295 1 O LEU A 294 N LEU A 273 SHEET 1 AA3 2 PHE A 323 LEU A 326 0 SHEET 2 AA3 2 ILE A 329 GLN A 332 -1 O LEU A 331 N ILE A 324 SHEET 1 AA4 2 LYS B 32 THR B 33 0 SHEET 2 AA4 2 THR B 39 TYR B 40 -1 O TYR B 40 N LYS B 32 SHEET 1 AA5 2 VAL B 54 ARG B 55 0 SHEET 2 AA5 2 GLU B 61 THR B 62 -1 O THR B 62 N VAL B 54 LINK SG CYS B 21 ZN ZN B 101 1555 1555 2.29 LINK SG CYS B 24 ZN ZN B 101 1555 1555 2.66 LINK SG CYS B 36 ZN ZN B 102 1555 1555 2.75 LINK ND1 HIS B 38 ZN ZN B 102 1555 1555 2.12 LINK SG CYS B 41 ZN ZN B 101 1555 1555 2.54 LINK SG CYS B 44 ZN ZN B 101 1555 1555 2.52 LINK SG CYS B 56 ZN ZN B 102 1555 1555 2.81 LINK SG CYS B 59 ZN ZN B 102 1555 1555 2.67 CISPEP 1 LYS A 185 ALA A 186 0 8.74 CISPEP 2 ALA A 186 GLY A 187 0 -1.90 CISPEP 3 GLU A 188 THR A 189 0 0.17 CISPEP 4 PRO A 406 PRO A 407 0 2.31 CISPEP 5 PHE B 77 PHE B 78 0 -0.71 SITE 1 AC1 4 CYS B 21 CYS B 24 CYS B 41 CYS B 44 SITE 1 AC2 4 CYS B 36 HIS B 38 CYS B 56 CYS B 59 CRYST1 71.015 71.015 122.944 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014082 0.008130 0.000000 0.00000 SCALE2 0.000000 0.016260 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008134 0.00000