PDB Short entry for 5K5I
HEADER    TRANSCRIPTION/DNA                       23-MAY-16   5K5I              
TITLE     HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF5-8 AND DNA COMPLEX       
TITLE    2 STRUCTURE IN SPACE GROUP P65                                         
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TRANSCRIPTIONAL REPRESSOR CTCF;                            
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 378-489;                                      
COMPND   5 SYNONYM: 11-ZINC FINGER PROTEIN,CCCTC-BINDING FACTOR,CTCFL PARALOG;  
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: DNA (5'-D(*CP*CP*CP*TP*GP*CP*TP*GP*GP*CP*AP*CP*C)-3');     
COMPND   9 CHAIN: B;                                                            
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: DNA (5'-D(*GP*TP*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*G)-3');     
COMPND  13 CHAIN: C;                                                            
COMPND  14 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: CTCF;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) RIL-CODON PLUS;                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX-6P-1;                            
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PXC1199;                                  
SOURCE  11 MOL_ID: 2;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  14 ORGANISM_TAXID: 32630;                                               
SOURCE  15 MOL_ID: 3;                                                           
SOURCE  16 SYNTHETIC: YES;                                                      
SOURCE  17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  18 ORGANISM_TAXID: 32630                                                
KEYWDS    CCCTC-BINDING FACTOR, CTCF, ZINC FINGER, TRANSCRIPTION-DNA COMPLEX    
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    H.HASHIMOTO,X.CHENG                                                   
REVDAT   7   06-MAR-24 5K5I    1       REMARK LINK                              
REVDAT   6   25-DEC-19 5K5I    1       REMARK                                   
REVDAT   5   22-NOV-17 5K5I    1       REMARK                                   
REVDAT   4   20-SEP-17 5K5I    1       REMARK                                   
REVDAT   3   14-JUN-17 5K5I    1       JRNL                                     
REVDAT   2   07-JUN-17 5K5I    1       JRNL                                     
REVDAT   1   24-MAY-17 5K5I    0                                                
JRNL        AUTH   H.HASHIMOTO,D.WANG,J.R.HORTON,X.ZHANG,V.G.CORCES,X.CHENG     
JRNL        TITL   STRUCTURAL BASIS FOR THE VERSATILE AND METHYLATION-DEPENDENT 
JRNL        TITL 2 BINDING OF CTCF TO DNA.                                      
JRNL        REF    MOL. CELL                     V.  66   711 2017              
JRNL        REFN                   ISSN 1097-4164                               
JRNL        PMID   28529057                                                     
JRNL        DOI    10.1016/J.MOLCEL.2017.05.004                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.19 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (DEV_2400: ???)                               
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 23.25                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.430                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 96.9                           
REMARK   3   NUMBER OF REFLECTIONS             : 30205                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.220                           
REMARK   3   R VALUE            (WORKING SET) : 0.219                           
REMARK   3   FREE R VALUE                     : 0.245                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.900                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1480                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 23.2487 -  4.8187    0.97     2620   140  0.1602 0.1337        
REMARK   3     2  4.8187 -  3.8303    1.00     2688   133  0.1836 0.2413        
REMARK   3     3  3.8303 -  3.3477    1.00     2729   128  0.1979 0.2674        
REMARK   3     4  3.3477 -  3.0424    1.00     2664   135  0.2530 0.2978        
REMARK   3     5  3.0424 -  2.8247    1.00     2682   136  0.3096 0.3248        
REMARK   3     6  2.8247 -  2.6584    0.99     2664   135  0.2870 0.3198        
REMARK   3     7  2.6584 -  2.5254    0.99     2680   144  0.3038 0.3038        
REMARK   3     8  2.5254 -  2.4156    0.98     2715   129  0.3043 0.3433        
REMARK   3     9  2.4156 -  2.3227    0.98     2617   147  0.3172 0.3916        
REMARK   3    10  2.3227 -  2.2426    0.97     2580   143  0.3387 0.3175        
REMARK   3    11  2.2426 -  2.1726    0.77     2086   110  0.3553 0.3965        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.350            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.750           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.004           1572                                  
REMARK   3   ANGLE     :  0.448           2197                                  
REMARK   3   CHIRALITY :  0.031            232                                  
REMARK   3   PLANARITY :  0.003            189                                  
REMARK   3   DIHEDRAL  : 21.612            614                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5K5I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-16.                  
REMARK 100 THE DEPOSITION ID IS D_1000221739.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 09-FEB-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.27046                            
REMARK 200  MONOCHROMATOR                  : SI (1 1 1)                         
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : RAYONIX MX300-HS                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 30205                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.190                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 23.247                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY                : 14.20                              
REMARK 200  R MERGE                    (I) : 0.10500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 19.2900                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.27                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 6.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.67400                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.333                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD                          
REMARK 200 SOFTWARE USED: AUTOSOL                                               
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 65.10                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) POLYETHYLENE GLYCOL 3350,      
REMARK 280  0.2 M AMMONIUM SULFATE, 0.1 M SODIUM CACODYLATE PH 6.5, VAPOR       
REMARK 280  DIFFUSION, SITTING DROP, TEMPERATURE 289K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+1/6                                            
REMARK 290       6555   X-Y,X,Z+5/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000      173.63333            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       86.81667            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000      130.22500            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       43.40833            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000      217.04167            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4090 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 11090 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A   373                                                      
REMARK 465     PRO A   374                                                      
REMARK 465     LEU A   375                                                      
REMARK 465     GLY A   376                                                      
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 501  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 381   SG                                                     
REMARK 620 2 CYS A 384   SG  106.1                                              
REMARK 620 3 HIS A 397   NE2 112.6  87.1                                        
REMARK 620 4 HIS A 401   NE2 119.9 111.3 114.6                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 506  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 GLU A 408   OE2                                                    
REMARK 620 2 HIS A 413   ND1 101.6                                              
REMARK 620 3 HIS A 441   NE2  64.1  81.8                                        
REMARK 620 4 GLU A 478   OE1  64.9  84.8   3.4                                  
REMARK 620 5 GLU A 478   OE2  62.2  85.2   3.6   2.7                            
REMARK 620 N                    1     2     3     4                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 502  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 409   SG                                                     
REMARK 620 2 CYS A 412   SG  116.7                                              
REMARK 620 3 HIS A 425   NE2 115.4 100.5                                        
REMARK 620 4 HIS A 430   NE2 106.8 107.9 109.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 503  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 439   SG                                                     
REMARK 620 2 CYS A 442   SG  114.4                                              
REMARK 620 3 HIS A 455   NE2 117.6 104.1                                        
REMARK 620 4 HIS A 460   NE2 106.9 112.4 100.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 504  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 469   SG                                                     
REMARK 620 2 CYS A 472   SG  101.7                                              
REMARK 620 3 HIS A 485   NE2 121.3  91.2                                        
REMARK 620 4 HIS A 489   NE2 123.3 108.6 105.0                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 504                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 506                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5K5L   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5K5J   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5K5H   RELATED DB: PDB                                   
DBREF  5K5I A  378   489  UNP    P49711   CTCF_HUMAN     378    489             
DBREF  5K5I B    1    13  PDB    5K5I     5K5I             1     13             
DBREF  5K5I C    1    13  PDB    5K5I     5K5I             1     13             
SEQADV 5K5I GLY A  373  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5I PRO A  374  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5I LEU A  375  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5I GLY A  376  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5I SER A  377  UNP  P49711              EXPRESSION TAG                 
SEQRES   1 A  117  GLY PRO LEU GLY SER PRO PHE GLN CYS SER LEU CYS SER          
SEQRES   2 A  117  TYR ALA SER ARG ASP THR TYR LYS LEU LYS ARG HIS MET          
SEQRES   3 A  117  ARG THR HIS SER GLY GLU LYS PRO TYR GLU CYS TYR ILE          
SEQRES   4 A  117  CYS HIS ALA ARG PHE THR GLN SER GLY THR MET LYS MET          
SEQRES   5 A  117  HIS ILE LEU GLN LYS HIS THR GLU ASN VAL ALA LYS PHE          
SEQRES   6 A  117  HIS CYS PRO HIS CYS ASP THR VAL ILE ALA ARG LYS SER          
SEQRES   7 A  117  ASP LEU GLY VAL HIS LEU ARG LYS GLN HIS SER TYR ILE          
SEQRES   8 A  117  GLU GLN GLY LYS LYS CYS ARG TYR CYS ASP ALA VAL PHE          
SEQRES   9 A  117  HIS GLU ARG TYR ALA LEU ILE GLN HIS GLN LYS SER HIS          
SEQRES   1 B   13   DC  DC  DC  DT  DG  DC  DT  DG  DG  DC  DA  DC  DC          
SEQRES   1 C   13   DG  DT  DG  DC  DC  DA  DG  DC  DA  DG  DG  DG  DG          
HET     ZN  A 501       1                                                       
HET     ZN  A 502       1                                                       
HET     ZN  A 503       1                                                       
HET     ZN  A 504       1                                                       
HET    SO4  A 505       5                                                       
HET     ZN  A 506       1                                                       
HETNAM      ZN ZINC ION                                                         
HETNAM     SO4 SULFATE ION                                                      
FORMUL   4   ZN    5(ZN 2+)                                                     
FORMUL   8  SO4    O4 S 2-                                                      
FORMUL  10  HOH   *10(H2 O)                                                     
HELIX    1 AA1 ASP A  390  MET A  398  1                                   9    
HELIX    2 AA2 MET A  398  GLY A  403  1                                   6    
HELIX    3 AA3 GLN A  418  HIS A  430  1                                  13    
HELIX    4 AA4 ARG A  448  HIS A  460  1                                  13    
HELIX    5 AA5 GLU A  478  SER A  488  1                                  11    
SHEET    1 AA1 2 PHE A 379  GLN A 380  0                                        
SHEET    2 AA1 2 ALA A 387  SER A 388 -1  O  SER A 388   N  PHE A 379           
SHEET    1 AA2 2 TYR A 407  GLU A 408  0                                        
SHEET    2 AA2 2 ARG A 415  PHE A 416 -1  O  PHE A 416   N  TYR A 407           
SHEET    1 AA3 2 PHE A 437  HIS A 438  0                                        
SHEET    2 AA3 2 VAL A 445  ILE A 446 -1  O  ILE A 446   N  PHE A 437           
SHEET    1 AA4 2 LYS A 467  LYS A 468  0                                        
SHEET    2 AA4 2 VAL A 475  PHE A 476 -1  O  PHE A 476   N  LYS A 467           
LINK         SG  CYS A 381                ZN    ZN A 501     1555   1555  2.33  
LINK         SG  CYS A 384                ZN    ZN A 501     1555   1555  2.27  
LINK         NE2 HIS A 397                ZN    ZN A 501     1555   1555  2.04  
LINK         NE2 HIS A 401                ZN    ZN A 501     1555   1555  2.02  
LINK         OE2 GLU A 408                ZN    ZN A 506     1555   5555  2.00  
LINK         SG  CYS A 409                ZN    ZN A 502     1555   1555  2.31  
LINK         SG  CYS A 412                ZN    ZN A 502     1555   1555  2.31  
LINK         ND1 HIS A 413                ZN    ZN A 506     1555   5555  2.03  
LINK         NE2 HIS A 425                ZN    ZN A 502     1555   1555  2.04  
LINK         NE2 HIS A 430                ZN    ZN A 502     1555   1555  2.03  
LINK         SG  CYS A 439                ZN    ZN A 503     1555   1555  2.24  
LINK         NE2 HIS A 441                ZN    ZN A 506     1555   1555  2.06  
LINK         SG  CYS A 442                ZN    ZN A 503     1555   1555  2.28  
LINK         NE2 HIS A 455                ZN    ZN A 503     1555   1555  2.04  
LINK         NE2 HIS A 460                ZN    ZN A 503     1555   1555  2.01  
LINK         SG  CYS A 469                ZN    ZN A 504     1555   1555  2.33  
LINK         SG  CYS A 472                ZN    ZN A 504     1555   1555  2.30  
LINK         OE1 GLU A 478                ZN    ZN A 506     1555   1555  2.01  
LINK         OE2 GLU A 478                ZN    ZN A 506     1555   1555  2.00  
LINK         NE2 HIS A 485                ZN    ZN A 504     1555   1555  2.04  
LINK         NE2 HIS A 489                ZN    ZN A 504     1555   1555  2.04  
SITE     1 AC1  4 CYS A 381  CYS A 384  HIS A 397  HIS A 401                    
SITE     1 AC2  4 CYS A 409  CYS A 412  HIS A 425  HIS A 430                    
SITE     1 AC3  4 CYS A 439  CYS A 442  HIS A 455  HIS A 460                    
SITE     1 AC4  4 CYS A 469  CYS A 472  HIS A 485  HIS A 489                    
SITE     1 AC5  6 TYR A 392  ARG A 396  ARG A 399  TYR A 407                    
SITE     2 AC5  6 GLN A 418  SER A 419                                          
SITE     1 AC6  4 GLU A 408  HIS A 413  HIS A 441  GLU A 478                    
CRYST1   45.075   45.075  260.450  90.00  90.00 120.00 P 65          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022185  0.012809  0.000000        0.00000                         
SCALE2      0.000000  0.025617  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.003840        0.00000