PDB Short entry for 5K5J
HEADER    TRANSCRIPTION/DNA                       23-MAY-16   5K5J              
TITLE     HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF5-8 AND DNA COMPLEX       
TITLE    2 STRUCTURE IN SPACE GROUP P41212                                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TRANSCRIPTIONAL REPRESSOR CTCF;                            
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 378-489;                                      
COMPND   5 SYNONYM: 11-ZINC FINGER PROTEIN,CCCTC-BINDING FACTOR,CTCFL PARALOG;  
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: DNA (5'-D(*CP*CP*CP*TP*GP*CP*TP*GP*GP*CP*AP*AP*C)-3');     
COMPND   9 CHAIN: B;                                                            
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: DNA (5'-D(*TP*TP*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*G)-3');     
COMPND  13 CHAIN: C;                                                            
COMPND  14 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: CTCF;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21-(DE3)-RIL CODON PLUS;                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX-6P-1;                            
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PXC1199;                                  
SOURCE  11 MOL_ID: 2;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  14 ORGANISM_TAXID: 32630;                                               
SOURCE  15 MOL_ID: 3;                                                           
SOURCE  16 SYNTHETIC: YES;                                                      
SOURCE  17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  18 ORGANISM_TAXID: 32630                                                
KEYWDS    CCCTC-BINDING FACTOR, CTCF, ZINC FINGER, TRANSCRIPTION-DNA COMPLEX    
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    H.HASHIMOTO,X.CHENG                                                   
REVDAT   6   27-SEP-23 5K5J    1       REMARK                                   
REVDAT   5   25-DEC-19 5K5J    1       REMARK                                   
REVDAT   4   20-SEP-17 5K5J    1       REMARK                                   
REVDAT   3   14-JUN-17 5K5J    1       JRNL                                     
REVDAT   2   07-JUN-17 5K5J    1       JRNL                                     
REVDAT   1   24-MAY-17 5K5J    0                                                
JRNL        AUTH   H.HASHIMOTO,D.WANG,J.R.HORTON,X.ZHANG,V.G.CORCES,X.CHENG     
JRNL        TITL   STRUCTURAL BASIS FOR THE VERSATILE AND METHYLATION-DEPENDENT 
JRNL        TITL 2 BINDING OF CTCF TO DNA.                                      
JRNL        REF    MOL. CELL                     V.  66   711 2017              
JRNL        REFN                   ISSN 1097-4164                               
JRNL        PMID   28529057                                                     
JRNL        DOI    10.1016/J.MOLCEL.2017.05.004                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.29 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (DEV_2400: ???)                               
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 27.87                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 14269                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.210                           
REMARK   3   R VALUE            (WORKING SET) : 0.208                           
REMARK   3   FREE R VALUE                     : 0.254                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.010                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 715                             
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 27.8670 -  3.9080    0.97     2829   150  0.1592 0.2034        
REMARK   3     2  3.9080 -  3.1032    0.97     2655   139  0.2191 0.2731        
REMARK   3     3  3.1032 -  2.7113    1.00     2713   144  0.2875 0.3291        
REMARK   3     4  2.7113 -  2.4636    1.00     2673   141  0.2796 0.3017        
REMARK   3     5  2.4636 -  2.2871    1.00     2684   141  0.2934 0.3671        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.280            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.570           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 54.99                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.004           1604                                  
REMARK   3   ANGLE     :  0.500           2253                                  
REMARK   3   CHIRALITY :  0.035            240                                  
REMARK   3   PLANARITY :  0.003            193                                  
REMARK   3   DIHEDRAL  : 19.402            853                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 12                                         
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: ( CHAIN A AND RESID 376:380 )                          
REMARK   3    ORIGIN FOR THE GROUP (A): -13.3194  21.4347   0.9945              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.7518 T22:   0.9735                                     
REMARK   3      T33:   0.6397 T12:  -0.0025                                     
REMARK   3      T13:  -0.1662 T23:  -0.0778                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.2254 L22:   3.3421                                     
REMARK   3      L33:   3.0571 L12:   2.1262                                     
REMARK   3      L13:   1.9529 L23:   2.8667                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0878 S12:  -1.5331 S13:  -0.3328                       
REMARK   3      S21:   2.2222 S22:  -0.6284 S23:  -1.2384                       
REMARK   3      S31:  -0.3692 S32:   0.5347 S33:   1.0885                       
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: ( CHAIN A AND RESID 381:428 )                          
REMARK   3    ORIGIN FOR THE GROUP (A):  -4.2888  33.9109 -10.9454              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.5867 T22:   0.3787                                     
REMARK   3      T33:   0.4981 T12:  -0.0575                                     
REMARK   3      T13:   0.0225 T23:  -0.1444                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   7.3289 L22:   1.8805                                     
REMARK   3      L33:   3.6535 L12:   2.6013                                     
REMARK   3      L13:  -2.0846 L23:   0.0800                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.2752 S12:  -0.4431 S13:   0.6791                       
REMARK   3      S21:   0.0772 S22:   0.0227 S23:  -0.0449                       
REMARK   3      S31:  -0.7835 S32:   0.3193 S33:  -0.2655                       
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    SELECTION: ( CHAIN A AND RESID 429:433 )                          
REMARK   3    ORIGIN FOR THE GROUP (A):  13.0239  39.1051 -23.4448              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.9765 T22:   0.7554                                     
REMARK   3      T33:   0.9241 T12:  -0.3161                                     
REMARK   3      T13:   0.1597 T23:  -0.0067                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   6.2880 L22:   5.8099                                     
REMARK   3      L33:   6.9665 L12:  -5.6598                                     
REMARK   3      L13:   4.0000 L23:  -1.8271                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.2854 S12:   1.3693 S13:   3.1014                       
REMARK   3      S21:  -0.7157 S22:   0.0270 S23:  -1.5074                       
REMARK   3      S31:  -0.7356 S32:   1.8553 S33:  -0.0638                       
REMARK   3   TLS GROUP : 4                                                      
REMARK   3    SELECTION: ( CHAIN A AND RESID 434:470 )                          
REMARK   3    ORIGIN FOR THE GROUP (A):   7.5452  15.9622 -30.4513              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.3831 T22:   0.4706                                     
REMARK   3      T33:   0.4669 T12:  -0.0242                                     
REMARK   3      T13:   0.0010 T23:  -0.0662                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.5892 L22:   6.4599                                     
REMARK   3      L33:   5.3407 L12:   0.7267                                     
REMARK   3      L13:   1.2091 L23:   4.7485                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0547 S12:   0.0732 S13:   0.2178                       
REMARK   3      S21:  -0.0166 S22:   0.1810 S23:  -0.2110                       
REMARK   3      S31:  -0.2951 S32:   0.2039 S33:  -0.2733                       
REMARK   3   TLS GROUP : 5                                                      
REMARK   3    SELECTION: ( CHAIN A AND RESID 471:484 )                          
REMARK   3    ORIGIN FOR THE GROUP (A):   5.3410   7.7305 -41.3454              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.3987 T22:   0.4207                                     
REMARK   3      T33:   0.4176 T12:   0.0329                                     
REMARK   3      T13:   0.0096 T23:  -0.0598                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   5.5629 L22:   6.3165                                     
REMARK   3      L33:   7.3759 L12:   2.1142                                     
REMARK   3      L13:   2.4377 L23:   3.0396                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0516 S12:  -0.1070 S13:   0.4240                       
REMARK   3      S21:  -0.6860 S22:   0.0472 S23:  -0.1774                       
REMARK   3      S31:  -0.7977 S32:   0.1739 S33:   0.0069                       
REMARK   3   TLS GROUP : 6                                                      
REMARK   3    SELECTION: ( CHAIN A AND RESID 485:489 )                          
REMARK   3    ORIGIN FOR THE GROUP (A):   7.4315  11.1625 -47.7739              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.6538 T22:   0.5439                                     
REMARK   3      T33:   0.6180 T12:  -0.1465                                     
REMARK   3      T13:   0.0313 T23:   0.1314                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.2219 L22:   4.8126                                     
REMARK   3      L33:   2.0995 L12:  -0.2627                                     
REMARK   3      L13:  -0.0702 L23:   0.3660                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.2892 S12:   0.8797 S13:   0.7681                       
REMARK   3      S21:  -0.9052 S22:  -0.2644 S23:  -1.6213                       
REMARK   3      S31:  -1.1132 S32:   0.3389 S33:   0.6343                       
REMARK   3   TLS GROUP : 7                                                      
REMARK   3    SELECTION: ( CHAIN B AND RESID 1:5 )                              
REMARK   3    ORIGIN FOR THE GROUP (A):   5.7636  26.9261  -9.1865              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.6104 T22:   0.7426                                     
REMARK   3      T33:   0.4962 T12:   0.0681                                     
REMARK   3      T13:  -0.0139 T23:  -0.1359                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.3579 L22:   4.1778                                     
REMARK   3      L33:   2.1419 L12:   2.5187                                     
REMARK   3      L13:  -0.9511 L23:  -0.3681                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.6734 S12:   0.6744 S13:   0.0437                       
REMARK   3      S21:   0.0298 S22:   0.4260 S23:  -0.2035                       
REMARK   3      S31:  -0.3292 S32:   0.2561 S33:  -1.3555                       
REMARK   3   TLS GROUP : 8                                                      
REMARK   3    SELECTION: ( CHAIN B AND RESID 6:9 )                              
REMARK   3    ORIGIN FOR THE GROUP (A):  -4.2213  22.9303 -23.2797              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.5450 T22:   0.5720                                     
REMARK   3      T33:   0.4508 T12:  -0.0880                                     
REMARK   3      T13:  -0.0049 T23:  -0.1140                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   4.9111 L22:   8.3716                                     
REMARK   3      L33:   6.9884 L12:  -4.8045                                     
REMARK   3      L13:   2.9703 L23:  -5.8102                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.3776 S12:   0.1960 S13:  -0.0016                       
REMARK   3      S21:  -0.8625 S22:  -0.1972 S23:   0.0873                       
REMARK   3      S31:   0.0676 S32:   0.3210 S33:  -0.3091                       
REMARK   3   TLS GROUP : 9                                                      
REMARK   3    SELECTION: ( CHAIN B AND RESID 10:13 )                            
REMARK   3    ORIGIN FOR THE GROUP (A):  -0.7295  31.6392 -36.6285              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   1.0043 T22:   0.7273                                     
REMARK   3      T33:   0.5901 T12:  -0.1601                                     
REMARK   3      T13:   0.0953 T23:   0.0078                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   3.3152 L22:   2.7805                                     
REMARK   3      L33:   2.4904 L12:   2.5928                                     
REMARK   3      L13:  -2.6157 L23:  -1.4767                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.2090 S12:   1.4307 S13:   0.7926                       
REMARK   3      S21:  -1.8000 S22:   1.1602 S23:  -0.2784                       
REMARK   3      S31:  -0.5766 S32:  -0.9979 S33:  -1.0065                       
REMARK   3   TLS GROUP : 10                                                     
REMARK   3    SELECTION: ( CHAIN C AND RESID 1:4 )                              
REMARK   3    ORIGIN FOR THE GROUP (A):   1.6822  24.4071 -33.1117              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.7363 T22:   0.6161                                     
REMARK   3      T33:   0.5353 T12:  -0.0750                                     
REMARK   3      T13:   0.0564 T23:  -0.0479                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.2797 L22:   3.3547                                     
REMARK   3      L33:   5.7416 L12:  -2.4187                                     
REMARK   3      L13:   2.1425 L23:  -3.6656                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.5086 S12:   0.4075 S13:  -0.7622                       
REMARK   3      S21:   0.0797 S22:   0.0998 S23:   0.2856                       
REMARK   3      S31:   0.3484 S32:  -0.0420 S33:  -0.5254                       
REMARK   3   TLS GROUP : 11                                                     
REMARK   3    SELECTION: ( CHAIN C AND RESID 5:9 )                              
REMARK   3    ORIGIN FOR THE GROUP (A):  -2.8081  29.5876 -18.0488              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.6301 T22:   0.5562                                     
REMARK   3      T33:   0.4668 T12:  -0.0212                                     
REMARK   3      T13:   0.0224 T23:  -0.0829                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   5.4113 L22:   5.5148                                     
REMARK   3      L33:   6.5775 L12:   0.7001                                     
REMARK   3      L13:  -2.4793 L23:  -1.9359                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0643 S12:   0.0678 S13:   0.6845                       
REMARK   3      S21:   0.1572 S22:   0.2593 S23:   0.2167                       
REMARK   3      S31:  -0.7389 S32:   0.3309 S33:  -0.3041                       
REMARK   3   TLS GROUP : 12                                                     
REMARK   3    SELECTION: ( CHAIN C AND RESID 10:13 )                            
REMARK   3    ORIGIN FOR THE GROUP (A):   3.0264  21.6384  -3.5851              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.6870 T22:   1.0103                                     
REMARK   3      T33:   0.5231 T12:   0.0386                                     
REMARK   3      T13:  -0.0333 T23:  -0.2307                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.4861 L22:   9.8430                                     
REMARK   3      L33:   2.6743 L12:   0.6756                                     
REMARK   3      L13:   2.5586 L23:   0.1263                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.2629 S12:  -0.9947 S13:  -0.4923                       
REMARK   3      S21:   0.9603 S22:   1.0879 S23:  -0.5235                       
REMARK   3      S31:  -0.0241 S32:   1.2464 S33:  -1.4189                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5K5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-16.                  
REMARK 100 THE DEPOSITION ID IS D_1000221740.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 10-JUN-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.000                              
REMARK 200  MONOCHROMATOR                  : SI (1 1 1)                         
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : RAYONIX MX300-HS                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 14269                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.287                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 27.867                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY                : 10.80                              
REMARK 200  R MERGE                    (I) : 0.08000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 28.2710                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.48                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 11.00                              
REMARK 200  R MERGE FOR SHELL          (I) : 0.96500                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.700                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 5K5I                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 64.33                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) POLYETHYLENE GLYCOL 3350,      
REMARK 280  0.2 M AMMONIUM SULFATE, AND 0.1 M BIS-TRIS HCL, PH 5.5, VAPOR       
REMARK 280  DIFFUSION, SITTING DROP, TEMPERATURE 289K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2                        
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -Y+1/2,X+1/2,Z+1/4                                      
REMARK 290       4555   Y+1/2,-X+1/2,Z+3/4                                      
REMARK 290       5555   -X+1/2,Y+1/2,-Z+1/4                                     
REMARK 290       6555   X+1/2,-Y+1/2,-Z+3/4                                     
REMARK 290       7555   Y,X,-Z                                                  
REMARK 290       8555   -Y,-X,-Z+1/2                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       86.13200            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000       29.45150            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000       29.45150            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       43.06600            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000       29.45150            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000       29.45150            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000      129.19800            
REMARK 290   SMTRY1   5 -1.000000  0.000000  0.000000       29.45150            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       29.45150            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000       43.06600            
REMARK 290   SMTRY1   6  1.000000  0.000000  0.000000       29.45150            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       29.45150            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000      129.19800            
REMARK 290   SMTRY1   7  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000       86.13200            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 11090 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A   373                                                      
REMARK 465     PRO A   374                                                      
REMARK 465     LEU A   375                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    CYS A 384     -168.83   -125.99                                   
REMARK 500    ILE A 411      -62.81   -102.15                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 501  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 381   SG                                                     
REMARK 620 2 CYS A 384   SG  120.6                                              
REMARK 620 3 HIS A 397   NE2 104.2  98.2                                        
REMARK 620 4 HIS A 401   NE2 112.2 119.7  95.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 502  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 409   SG                                                     
REMARK 620 2 CYS A 412   SG  115.5                                              
REMARK 620 3 HIS A 425   NE2 117.8  98.5                                        
REMARK 620 4 HIS A 430   NE2 112.5 110.0 100.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 503  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 439   SG                                                     
REMARK 620 2 CYS A 442   SG  117.0                                              
REMARK 620 3 HIS A 455   NE2 107.9 103.8                                        
REMARK 620 4 HIS A 460   NE2 101.7 125.7  98.3                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 504  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 469   SG                                                     
REMARK 620 2 CYS A 472   SG  118.5                                              
REMARK 620 3 HIS A 485   NE2 107.0 101.1                                        
REMARK 620 4 HIS A 489   NE2 104.6 118.5 105.9                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 504                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 506                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5K5L   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5K5I   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5K5H   RELATED DB: PDB                                   
DBREF  5K5J A  378   489  UNP    P49711   CTCF_HUMAN     378    489             
DBREF  5K5J B    1    13  PDB    5K5J     5K5J             1     13             
DBREF  5K5J C    1    13  PDB    5K5J     5K5J             1     13             
SEQADV 5K5J GLY A  373  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5J PRO A  374  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5J LEU A  375  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5J GLY A  376  UNP  P49711              EXPRESSION TAG                 
SEQADV 5K5J SER A  377  UNP  P49711              EXPRESSION TAG                 
SEQRES   1 A  117  GLY PRO LEU GLY SER PRO PHE GLN CYS SER LEU CYS SER          
SEQRES   2 A  117  TYR ALA SER ARG ASP THR TYR LYS LEU LYS ARG HIS MET          
SEQRES   3 A  117  ARG THR HIS SER GLY GLU LYS PRO TYR GLU CYS TYR ILE          
SEQRES   4 A  117  CYS HIS ALA ARG PHE THR GLN SER GLY THR MET LYS MET          
SEQRES   5 A  117  HIS ILE LEU GLN LYS HIS THR GLU ASN VAL ALA LYS PHE          
SEQRES   6 A  117  HIS CYS PRO HIS CYS ASP THR VAL ILE ALA ARG LYS SER          
SEQRES   7 A  117  ASP LEU GLY VAL HIS LEU ARG LYS GLN HIS SER TYR ILE          
SEQRES   8 A  117  GLU GLN GLY LYS LYS CYS ARG TYR CYS ASP ALA VAL PHE          
SEQRES   9 A  117  HIS GLU ARG TYR ALA LEU ILE GLN HIS GLN LYS SER HIS          
SEQRES   1 B   13   DC  DC  DC  DT  DG  DC  DT  DG  DG  DC  DA  DA  DC          
SEQRES   1 C   13   DT  DT  DG  DC  DC  DA  DG  DC  DA  DG  DG  DG  DG          
HET     ZN  A 501       1                                                       
HET     ZN  A 502       1                                                       
HET     ZN  A 503       1                                                       
HET     ZN  A 504       1                                                       
HET    SO4  A 505       5                                                       
HET    ACT  A 506       4                                                       
HETNAM      ZN ZINC ION                                                         
HETNAM     SO4 SULFATE ION                                                      
HETNAM     ACT ACETATE ION                                                      
FORMUL   4   ZN    4(ZN 2+)                                                     
FORMUL   8  SO4    O4 S 2-                                                      
FORMUL   9  ACT    C2 H3 O2 1-                                                  
FORMUL  10  HOH   *29(H2 O)                                                     
HELIX    1 AA1 ASP A  390  GLY A  403  1                                  14    
HELIX    2 AA2 GLN A  418  THR A  431  1                                  14    
HELIX    3 AA3 ARG A  448  HIS A  460  1                                  13    
HELIX    4 AA4 GLU A  478  HIS A  489  1                                  12    
SHEET    1 AA1 2 PHE A 379  GLN A 380  0                                        
SHEET    2 AA1 2 ALA A 387  SER A 388 -1  O  SER A 388   N  PHE A 379           
SHEET    1 AA2 2 TYR A 407  GLU A 408  0                                        
SHEET    2 AA2 2 ARG A 415  PHE A 416 -1  O  PHE A 416   N  TYR A 407           
SHEET    1 AA3 2 PHE A 437  HIS A 438  0                                        
SHEET    2 AA3 2 VAL A 445  ILE A 446 -1  O  ILE A 446   N  PHE A 437           
SHEET    1 AA4 2 LYS A 467  LYS A 468  0                                        
SHEET    2 AA4 2 VAL A 475  PHE A 476 -1  O  PHE A 476   N  LYS A 467           
LINK         SG  CYS A 381                ZN    ZN A 501     1555   1555  2.32  
LINK         SG  CYS A 384                ZN    ZN A 501     1555   1555  2.29  
LINK         NE2 HIS A 397                ZN    ZN A 501     1555   1555  2.05  
LINK         NE2 HIS A 401                ZN    ZN A 501     1555   1555  2.01  
LINK         SG  CYS A 409                ZN    ZN A 502     1555   1555  2.30  
LINK         SG  CYS A 412                ZN    ZN A 502     1555   1555  2.27  
LINK         NE2 HIS A 425                ZN    ZN A 502     1555   1555  2.05  
LINK         NE2 HIS A 430                ZN    ZN A 502     1555   1555  2.02  
LINK         SG  CYS A 439                ZN    ZN A 503     1555   1555  2.29  
LINK         SG  CYS A 442                ZN    ZN A 503     1555   1555  2.24  
LINK         NE2 HIS A 455                ZN    ZN A 503     1555   1555  2.04  
LINK         NE2 HIS A 460                ZN    ZN A 503     1555   1555  2.01  
LINK         SG  CYS A 469                ZN    ZN A 504     1555   1555  2.34  
LINK         SG  CYS A 472                ZN    ZN A 504     1555   1555  2.25  
LINK         NE2 HIS A 485                ZN    ZN A 504     1555   1555  2.05  
LINK         NE2 HIS A 489                ZN    ZN A 504     1555   1555  2.04  
SITE     1 AC1  4 CYS A 381  CYS A 384  HIS A 397  HIS A 401                    
SITE     1 AC2  4 CYS A 409  CYS A 412  HIS A 425  HIS A 430                    
SITE     1 AC3  4 CYS A 439  CYS A 442  HIS A 455  HIS A 460                    
SITE     1 AC4  4 CYS A 469  CYS A 472  HIS A 485  HIS A 489                    
SITE     1 AC5  6 TYR A 392  ARG A 396  ARG A 399  TYR A 407                    
SITE     2 AC5  6 GLN A 418  SER A 419                                          
SITE     1 AC6  3 ARG A 479  GLN A 486  HOH A 606                               
CRYST1   58.903   58.903  172.264  90.00  90.00  90.00 P 41 21 2     8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.016977  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.016977  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.005805        0.00000