PDB Short entry for 5KFR
HEADER    REPLICATION, TRANSFERASE/DNA            12-JUN-16   5KFR              
TITLE     HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX WITH SP-DATP-ALPHA-S:    
TITLE    2 REACTION WITH 20 MM MN2+ FOR 600S                                    
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE ETA;                                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: RAD30 HOMOLOG A,XERODERMA PIGMENTOSUM VARIANT TYPE PROTEIN; 
COMPND   5 EC: 2.7.7.7;                                                         
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3');        
COMPND   9 CHAIN: T;                                                            
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*(AS))-3');              
COMPND  13 CHAIN: P;                                                            
COMPND  14 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: POLH, RAD30, RAD30A, XPV;                                      
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET28;                                    
SOURCE  11 MOL_ID: 2;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  14 ORGANISM_TAXID: 9606;                                                
SOURCE  15 MOL_ID: 3;                                                           
SOURCE  16 SYNTHETIC: YES;                                                      
SOURCE  17 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  18 ORGANISM_TAXID: 9606                                                 
KEYWDS    IN CRYSTALLO REACTION, DNA POLYMERASE, METAL ION DEPENDENT CATALYSIS, 
KEYWDS   2 REPLICATION, TRANSFERASE-DNA COMPLEX                                 
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.GAO,W.YANG                                                          
REVDAT   2   20-SEP-17 5KFR    1       REMARK                                   
REVDAT   1   22-JUN-16 5KFR    0                                                
JRNL        AUTH   Y.GAO,W.YANG                                                 
JRNL        TITL   CAPTURE OF A THIRD MG2+ IS ESSENTIAL FOR CATALYZING DNA      
JRNL        TITL 2 SYNTHESIS.                                                   
JRNL        REF    SCIENCE                       V. 352  1334 2016              
JRNL        REFN                   ESSN 1095-9203                               
JRNL        PMID   27284197                                                     
JRNL        DOI    10.1126/SCIENCE.AAD9633                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.75 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.9_1692                                      
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 19.77                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.360                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.8                           
REMARK   3   NUMBER OF REFLECTIONS             : 44851                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.179                           
REMARK   3   R VALUE            (WORKING SET) : 0.175                           
REMARK   3   FREE R VALUE                     : 0.223                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 7.700                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 3453                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.220            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.600           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 36.15                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 35.52                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :   NULL           NULL                                  
REMARK   3   ANGLE     :   NULL           NULL                                  
REMARK   3   CHIRALITY :   NULL           NULL                                  
REMARK   3   PLANARITY :   NULL           NULL                                  
REMARK   3   DIHEDRAL  :   NULL           NULL                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5KFR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-16.                  
REMARK 100 THE DEPOSITION ID IS D_1000222165.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 03-JUL-14                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : DOUBLE CRYSTAL-LIQUID NITROGEN     
REMARK 200                                   COOLED                             
REMARK 200  OPTICS                         : 4*4 MOSIAC                         
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 300 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 44854                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.750                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY                : 7.500                              
REMARK 200  R MERGE                    (I) : 0.06300                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 17.2700                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.80                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.98500                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.430                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: 4ECQ                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 40.28                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG 2000MME, 0.1 M MES, PH 6.0,      
REMARK 280  EVAPORATION, TEMPERATURE 298K                                       
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+5/6                                            
REMARK 290       6555   X-Y,X,Z+1/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       27.10667            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       54.21333            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       40.66000            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       67.76667            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       13.55333            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 6760 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 21830 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     THR A   155                                                      
REMARK 465     THR A   156                                                      
REMARK 465     ALA A   157                                                      
REMARK 465     GLU A   158                                                      
REMARK 465     GLU A   159                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470      DC T   1    O5'  C5'  C4'  O4'  C3'  C2'  C1'                   
REMARK 470      DC T   1    N1   C2   O2   N3   C4   N4   C5                    
REMARK 470      DC T   1    C6                                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   OG1  THR A     3     OE1  GLN A     5              1.86            
REMARK 500   N    GLY A    -2     O    HOH A   602              1.98            
REMARK 500   OG   SER A   409     O    ILE A   411              2.02            
REMARK 500   O    HOH A   848     O    HOH A   910              2.07            
REMARK 500   O    HOH A   603     O    HOH A   892              2.07            
REMARK 500   OP1   DC T    11     O    HOH T   101              2.11            
REMARK 500   O    HOH A   678     O    HOH A   828              2.14            
REMARK 500   NE2  HIS A   240     O    HOH A   603              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH A   752     O    HOH A   910     5554     2.09            
REMARK 500   O    HOH A   884     O    HOH A   886     5664     2.14            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DA T   2   O3'    DT T   3   P      -0.076                       
REMARK 500     DT T   3   O3'    DT T   4   P      -0.072                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    CYS A  16       56.38     39.13                                   
REMARK 500    TYR A  39     -177.24     65.58                                   
REMARK 500    LYS A  40      -34.26   -155.15                                   
REMARK 500    GLN A 133        9.48     86.94                                   
REMARK 500    SER A 257       -9.71     93.17                                   
REMARK 500    LYS A 376     -118.02     61.78                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 ASP A  375     LYS A  376                  118.92                    
REMARK 500 LYS A  376     ARG A  377                 -136.11                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 502  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A  13   OD1                                                    
REMARK 620 2 MET A  14   O    81.4                                              
REMARK 620 3 ASP A 115   OD2 100.9  82.9                                        
REMARK 620 4  AS P   9   OP1  99.9 171.9  89.0                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 501  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A  13   OD2                                                    
REMARK 620 2 ASP A 115   OD1  93.1                                              
REMARK 620 3 GLU A 116   OE2  92.0  94.3                                        
REMARK 620 4  DT P   8   O3' 175.2  86.8  83.2                                  
REMARK 620 5  DT P   8   O3' 168.4  93.6  96.9  15.8                            
REMARK 620 6  AS P   9   OP1 102.6  93.8 162.9  82.2  67.6                      
REMARK 620 7 HOH P 107   O    86.1 173.3  92.4  94.5  86.1  79.8                
REMARK 620 8 STP A 506   O2A 100.0  94.4 164.7  84.8  70.1   2.6  79.1          
REMARK 620 N                    1     2     3     4     5     6     7           
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 501                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 502                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue STP A 506                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue DPO A 507                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5KFA   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFB   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFC   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG0   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG1   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG2   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG3   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG4   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG5   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG6   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KG7   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFD   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFE   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFS   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFT   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFU   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFV   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFW   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFX   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFG   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFY   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFZ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFH   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFK   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFL   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFI   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFJ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFM   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFN   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFO   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFP   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFQ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5KFF   RELATED DB: PDB                                   
DBREF  5KFR A    1   432  UNP    Q9Y253   POLH_HUMAN       1    432             
DBREF  5KFR T    1    12  PDB    5KFR     5KFR             1     12             
DBREF  5KFR P    1     9  PDB    5KFR     5KFR             1      9             
SEQADV 5KFR GLY A   -2  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 5KFR PRO A   -1  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 5KFR HIS A    0  UNP  Q9Y253              EXPRESSION TAG                 
SEQRES   1 A  435  GLY PRO HIS MET ALA THR GLY GLN ASP ARG VAL VAL ALA          
SEQRES   2 A  435  LEU VAL ASP MET ASP CYS PHE PHE VAL GLN VAL GLU GLN          
SEQRES   3 A  435  ARG GLN ASN PRO HIS LEU ARG ASN LYS PRO CYS ALA VAL          
SEQRES   4 A  435  VAL GLN TYR LYS SER TRP LYS GLY GLY GLY ILE ILE ALA          
SEQRES   5 A  435  VAL SER TYR GLU ALA ARG ALA PHE GLY VAL THR ARG SER          
SEQRES   6 A  435  MET TRP ALA ASP ASP ALA LYS LYS LEU CYS PRO ASP LEU          
SEQRES   7 A  435  LEU LEU ALA GLN VAL ARG GLU SER ARG GLY LYS ALA ASN          
SEQRES   8 A  435  LEU THR LYS TYR ARG GLU ALA SER VAL GLU VAL MET GLU          
SEQRES   9 A  435  ILE MET SER ARG PHE ALA VAL ILE GLU ARG ALA SER ILE          
SEQRES  10 A  435  ASP GLU ALA TYR VAL ASP LEU THR SER ALA VAL GLN GLU          
SEQRES  11 A  435  ARG LEU GLN LYS LEU GLN GLY GLN PRO ILE SER ALA ASP          
SEQRES  12 A  435  LEU LEU PRO SER THR TYR ILE GLU GLY LEU PRO GLN GLY          
SEQRES  13 A  435  PRO THR THR ALA GLU GLU THR VAL GLN LYS GLU GLY MET          
SEQRES  14 A  435  ARG LYS GLN GLY LEU PHE GLN TRP LEU ASP SER LEU GLN          
SEQRES  15 A  435  ILE ASP ASN LEU THR SER PRO ASP LEU GLN LEU THR VAL          
SEQRES  16 A  435  GLY ALA VAL ILE VAL GLU GLU MET ARG ALA ALA ILE GLU          
SEQRES  17 A  435  ARG GLU THR GLY PHE GLN CYS SER ALA GLY ILE SER HIS          
SEQRES  18 A  435  ASN LYS VAL LEU ALA LYS LEU ALA CYS GLY LEU ASN LYS          
SEQRES  19 A  435  PRO ASN ARG GLN THR LEU VAL SER HIS GLY SER VAL PRO          
SEQRES  20 A  435  GLN LEU PHE SER GLN MET PRO ILE ARG LYS ILE ARG SER          
SEQRES  21 A  435  LEU GLY GLY LYS LEU GLY ALA SER VAL ILE GLU ILE LEU          
SEQRES  22 A  435  GLY ILE GLU TYR MET GLY GLU LEU THR GLN PHE THR GLU          
SEQRES  23 A  435  SER GLN LEU GLN SER HIS PHE GLY GLU LYS ASN GLY SER          
SEQRES  24 A  435  TRP LEU TYR ALA MET CYS ARG GLY ILE GLU HIS ASP PRO          
SEQRES  25 A  435  VAL LYS PRO ARG GLN LEU PRO LYS THR ILE GLY CYS SER          
SEQRES  26 A  435  LYS ASN PHE PRO GLY LYS THR ALA LEU ALA THR ARG GLU          
SEQRES  27 A  435  GLN VAL GLN TRP TRP LEU LEU GLN LEU ALA GLN GLU LEU          
SEQRES  28 A  435  GLU GLU ARG LEU THR LYS ASP ARG ASN ASP ASN ASP ARG          
SEQRES  29 A  435  VAL ALA THR GLN LEU VAL VAL SER ILE ARG VAL GLN GLY          
SEQRES  30 A  435  ASP LYS ARG LEU SER SER LEU ARG ARG CYS CYS ALA LEU          
SEQRES  31 A  435  THR ARG TYR ASP ALA HIS LYS MET SER HIS ASP ALA PHE          
SEQRES  32 A  435  THR VAL ILE LYS ASN CYS ASN THR SER GLY ILE GLN THR          
SEQRES  33 A  435  GLU TRP SER PRO PRO LEU THR MET LEU PHE LEU CYS ALA          
SEQRES  34 A  435  THR LYS PHE SER ALA SER                                      
SEQRES   1 T   12   DC  DA  DT  DT  DA  DT  DG  DA  DC  DG  DC  DT              
SEQRES   1 P    9   DA  DG  DC  DG  DT  DC  DA  DT  AS                          
HET     AS  P   9      21                                                       
HET     MN  A 501       1                                                       
HET     MN  A 502       1                                                       
HET    GOL  A 503       6                                                       
HET    GOL  A 504       6                                                       
HET    GOL  A 505       6                                                       
HET    STP  A 506      30                                                       
HET    DPO  A 507       9                                                       
HETNAM      AS 2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE                         
HETNAM      MN MANGANESE (II) ION                                               
HETNAM     GOL GLYCEROL                                                         
HETNAM     STP 2'-DEOXYADENOSINE 5'-O-(1-THIOTRIPHOSPHATE)                      
HETNAM     DPO DIPHOSPHATE                                                      
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   3   AS    C10 H14 N5 O5 P S                                            
FORMUL   4   MN    2(MN 2+)                                                     
FORMUL   6  GOL    3(C3 H8 O3)                                                  
FORMUL   9  STP    C10 H16 N5 O11 P3 S                                          
FORMUL  10  DPO    O7 P2 4-                                                     
FORMUL  11  HOH   *461(H2 O)                                                    
HELIX    1 AA1 CYS A   16  ASN A   26  1                                  11    
HELIX    2 AA2 PRO A   27  ARG A   30  5                                   4    
HELIX    3 AA3 SER A   51  ALA A   56  1                                   6    
HELIX    4 AA4 TRP A   64  CYS A   72  1                                   9    
HELIX    5 AA5 LEU A   89  SER A  104  1                                  16    
HELIX    6 AA6 LEU A  121  GLN A  133  1                                  13    
HELIX    7 AA7 SER A  138  LEU A  142  5                                   5    
HELIX    8 AA8 GLN A  162  LEU A  178  1                                  17    
HELIX    9 AA9 SER A  185  GLY A  209  1                                  25    
HELIX   10 AB1 ASN A  219  ASN A  230  1                                  12    
HELIX   11 AB2 SER A  239  GLY A  241  5                                   3    
HELIX   12 AB3 SER A  242  GLN A  249  1                                   8    
HELIX   13 AB4 MET A  250  ILE A  255  5                                   6    
HELIX   14 AB5 GLY A  260  GLY A  271  1                                  12    
HELIX   15 AB6 TYR A  274  PHE A  281  5                                   8    
HELIX   16 AB7 THR A  282  GLY A  291  1                                  10    
HELIX   17 AB8 GLY A  291  CYS A  302  1                                  12    
HELIX   18 AB9 PRO A  326  ALA A  330  5                                   5    
HELIX   19 AC1 ARG A  334  ASP A  360  1                                  27    
HELIX   20 AC2 ASP A  391  LYS A  404  1                                  14    
HELIX   21 AC3 ASN A  405  ASN A  407  5                                   3    
SHEET    1 AA1 6 ILE A 109  SER A 113  0                                        
SHEET    2 AA1 6 GLU A 116  ASP A 120 -1  O  GLU A 116   N  ALA A 112           
SHEET    3 AA1 6 VAL A   9  MET A  14 -1  N  ALA A  10   O  VAL A 119           
SHEET    4 AA1 6 CYS A 212  SER A 217 -1  O  SER A 217   N  VAL A   9           
SHEET    5 AA1 6 GLN A 235  LEU A 237  1  O  THR A 236   N  ILE A 216           
SHEET    6 AA1 6 THR A 145  ILE A 147  1  N  TYR A 146   O  LEU A 237           
SHEET    1 AA2 3 GLY A  46  VAL A  50  0                                        
SHEET    2 AA2 3 CYS A  34  GLN A  38 -1  N  VAL A  36   O  ILE A  48           
SHEET    3 AA2 3 LEU A  76  GLN A  79  1  O  ALA A  78   N  VAL A  37           
SHEET    1 AA3 2 GLU A  82  SER A  83  0                                        
SHEET    2 AA3 2 LYS A  86  ALA A  87 -1  O  LYS A  86   N  SER A  83           
SHEET    1 AA4 3 ILE A 319  ASN A 324  0                                        
SHEET    2 AA4 3 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3 AA4 3 LEU A 331  THR A 333 -1  N  ALA A 332   O  TRP A 415           
SHEET    1 AA5 4 ILE A 319  ASN A 324  0                                        
SHEET    2 AA5 4 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3 AA5 4 ARG A 361  VAL A 372 -1  N  VAL A 367   O  CYS A 425           
SHEET    4 AA5 4 LEU A 381  ALA A 386 -1  O  ARG A 383   N  VAL A 368           
LINK         OD1 ASP A  13                MN  B MN A 502     1555   1555  2.18  
LINK         OD2 ASP A  13                MN    MN A 501     1555   1555  2.27  
LINK         O   MET A  14                MN  B MN A 502     1555   1555  2.26  
LINK         OD1 ASP A 115                MN    MN A 501     1555   1555  2.18  
LINK         OD2 ASP A 115                MN  B MN A 502     1555   1555  2.12  
LINK         OE2 GLU A 116                MN    MN A 501     1555   1555  2.23  
LINK         O3'A DT P   8                MN    MN A 501     1555   1555  2.23  
LINK         O3'B DT P   8                 P  B AS P   9     1555   1555  1.60  
LINK         O3'B DT P   8                MN    MN A 501     1555   1555  2.51  
LINK         OP1B AS P   9                MN    MN A 501     1555   1555  2.01  
LINK         OP1B AS P   9                MN  B MN A 502     1555   1555  2.52  
LINK        MN    MN A 501                 O   HOH P 107     1555   1555  2.23  
LINK        MN    MN A 501                 O2AASTP A 506     1555   1555  2.12  
CISPEP   1 LEU A  150    PRO A  151          0        -2.30                     
CISPEP   2 LYS A  231    PRO A  232          0         0.82                     
CISPEP   3 SER A  416    PRO A  417          0        -9.43                     
SITE     1 AC1  8 ASP A  13  ASP A 115  GLU A 116   MN A 502                    
SITE     2 AC1  8 STP A 506   DT P   8   AS P   9  HOH P 107                    
SITE     1 AC2  7 ASP A  13  MET A  14  ASP A 115   MN A 501                    
SITE     2 AC2  7 STP A 506  DPO A 507   AS P   9                               
SITE     1 AC3 10 ARG A  24  GLN A  25  PRO A 244  PHE A 247                    
SITE     2 AC3 10 SER A 248  GLY A 276  GLU A 277  HOH A 638                    
SITE     3 AC3 10 HOH A 670  HOH A 792                                          
SITE     1 AC4  7 GLU A  94  ALA A  95  GLU A  98  HOH A 682                    
SITE     2 AC4  7 HOH A 714  HOH A 715  HOH A 860                               
SITE     1 AC5 10 ASN A  26  HIS A  28  GLY A 271  ILE A 272                    
SITE     2 AC5 10 GLU A 273  TYR A 274  GLU A 277  HOH A 611                    
SITE     3 AC5 10 HOH A 617  HOH A 738                                          
SITE     1 AC6 29 ASP A  13  MET A  14  ASP A  15  CYS A  16                    
SITE     2 AC6 29 PHE A  17  PHE A  18  ILE A  48  ALA A  49                    
SITE     3 AC6 29 TYR A  52  ARG A  55  ARG A  61  ASP A 115                    
SITE     4 AC6 29 LYS A 231   MN A 501   MN A 502  DPO A 507                    
SITE     5 AC6 29 HOH A 601  HOH A 621  HOH A 632  HOH A 662                    
SITE     6 AC6 29 HOH A 735  HOH A 802   DT P   8   AS P   9                    
SITE     7 AC6 29 HOH P 102  HOH P 107   DT T   3   DT T   4                    
SITE     8 AC6 29  DA T   5                                                     
SITE     1 AC7 17 ASP A  13  MET A  14  ASP A  15  CYS A  16                    
SITE     2 AC7 17 PHE A  17  TYR A  52  ARG A  55  ARG A  61                    
SITE     3 AC7 17 ASP A 115  LYS A 231   MN A 502  STP A 506                    
SITE     4 AC7 17 HOH A 621  HOH A 632  HOH A 662  HOH A 735                    
SITE     5 AC7 17  AS P   9                                                     
CRYST1   98.250   98.250   81.320  90.00  90.00 120.00 P 61          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010178  0.005876  0.000000        0.00000                         
SCALE2      0.000000  0.011753  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.012297        0.00000