PDB Short entry for 5KO1 HEADER MEMBRANE PROTEINS/INHIBITOR 29-JUN-16 5KO1 TITLE PSEUDOKINASE DOMAIN OF MLKL BOUND TO COMPOUND 4. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MIXED LINEAGE KINASE DOMAIN-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 191-471; COMPND 5 SYNONYM: HMLKL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MLKL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PSEUDOKINASE DOMAIN MLKL TYPE1 INHIBITOR, MEMBRANE PROTEINS-INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.J.MARCOTTE REVDAT 3 27-SEP-23 5KO1 1 REMARK REVDAT 2 23-NOV-16 5KO1 1 JRNL REMARK REVDAT 1 16-NOV-16 5KO1 0 JRNL AUTH B.MA,D.MARCOTTE,M.PARAMASIVAM,K.MICHELSEN,T.WANG, JRNL AUTH 2 A.BERTOLOTTI-CIARLET,J.H.JONES,B.MOREE,M.BUTKO,J.SALAFSKY, JRNL AUTH 3 X.SUN,T.MCKEE,L.F.SILVIAN JRNL TITL ATP-COMPETITIVE MLKL BINDERS HAVE NO FUNCTIONAL IMPACT ON JRNL TITL 2 NECROPTOSIS. JRNL REF PLOS ONE V. 11 65983 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27832137 JRNL DOI 10.1371/JOURNAL.PONE.0165983 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 934 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.22 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1273 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2130 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.216 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.554 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2226 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2181 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3002 ; 1.863 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5029 ; 1.103 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 5.873 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;37.957 ;23.762 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 420 ;15.702 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;21.683 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2472 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 502 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1070 ; 2.712 ; 2.948 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1069 ; 2.707 ; 2.943 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1338 ; 4.067 ; 4.401 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5KO1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222507. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18649 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 63.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.14300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.73300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4WMI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BISTRIS PH 6.5 20% PEG3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.53500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.53500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.70000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.44000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.70000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.44000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.53500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.70000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.44000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 63.53500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.70000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.44000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 189 REMARK 465 SER A 190 REMARK 465 GLU A 191 REMARK 465 THR A 355 REMARK 465 GLN A 356 REMARK 465 THR A 357 REMARK 465 SER A 358 REMARK 465 MET A 359 REMARK 465 SER A 360 REMARK 465 LEU A 361 REMARK 465 GLY A 362 REMARK 465 THR A 363 REMARK 465 THR A 364 REMARK 465 ARG A 365 REMARK 465 ALA A 366 REMARK 465 ALA A 367 REMARK 465 THR A 368 REMARK 465 LYS A 471 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 LYS A 372 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 714 O HOH A 714 4555 1.59 REMARK 500 O HOH A 693 O HOH A 693 4555 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 243 CB - CA - C ANGL. DEV. = -12.5 DEGREES REMARK 500 CYS A 269 CA - CB - SG ANGL. DEV. = 9.3 DEGREES REMARK 500 ARG A 292 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 442 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 442 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 259 172.71 178.46 REMARK 500 THR A 273 -74.72 -69.60 REMARK 500 LYS A 331 71.12 -161.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6UY A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KNJ RELATED DB: PDB DBREF 5KO1 A 191 471 UNP Q8NB16 MLKL_HUMAN 191 471 SEQADV 5KO1 GLY A 189 UNP Q8NB16 EXPRESSION TAG SEQADV 5KO1 SER A 190 UNP Q8NB16 EXPRESSION TAG SEQADV 5KO1 ALA A 366 UNP Q8NB16 GLU 366 ENGINEERED MUTATION SEQADV 5KO1 ALA A 367 UNP Q8NB16 LYS 367 ENGINEERED MUTATION SEQRES 1 A 283 GLY SER GLU GLN ILE LYS GLU ILE LYS LYS GLU GLN LEU SEQRES 2 A 283 SER GLY SER PRO TRP ILE LEU LEU ARG GLU ASN GLU VAL SEQRES 3 A 283 SER THR LEU TYR LYS GLY GLU TYR HIS ARG ALA PRO VAL SEQRES 4 A 283 ALA ILE LYS VAL PHE LYS LYS LEU GLN ALA GLY SER ILE SEQRES 5 A 283 ALA ILE VAL ARG GLN THR PHE ASN LYS GLU ILE LYS THR SEQRES 6 A 283 MET LYS LYS PHE GLU SER PRO ASN ILE LEU ARG ILE PHE SEQRES 7 A 283 GLY ILE CYS ILE ASP GLU THR VAL THR PRO PRO GLN PHE SEQRES 8 A 283 SER ILE VAL MET GLU TYR CYS GLU LEU GLY THR LEU ARG SEQRES 9 A 283 GLU LEU LEU ASP ARG GLU LYS ASP LEU THR LEU GLY LYS SEQRES 10 A 283 ARG MET VAL LEU VAL LEU GLY ALA ALA ARG GLY LEU TYR SEQRES 11 A 283 ARG LEU HIS HIS SER GLU ALA PRO GLU LEU HIS GLY LYS SEQRES 12 A 283 ILE ARG SER SER ASN PHE LEU VAL THR GLN GLY TYR GLN SEQRES 13 A 283 VAL LYS LEU ALA GLY PHE GLU LEU ARG LYS THR GLN THR SEQRES 14 A 283 SER MET SER LEU GLY THR THR ARG ALA ALA THR ASP ARG SEQRES 15 A 283 VAL LYS SER THR ALA TYR LEU SER PRO GLN GLU LEU GLU SEQRES 16 A 283 ASP VAL PHE TYR GLN TYR ASP VAL LYS SER GLU ILE TYR SEQRES 17 A 283 SER PHE GLY ILE VAL LEU TRP GLU ILE ALA THR GLY ASP SEQRES 18 A 283 ILE PRO PHE GLN GLY CYS ASN SER GLU LYS ILE ARG LYS SEQRES 19 A 283 LEU VAL ALA VAL LYS ARG GLN GLN GLU PRO LEU GLY GLU SEQRES 20 A 283 ASP CYS PRO SER GLU LEU ARG GLU ILE ILE ASP GLU CYS SEQRES 21 A 283 ARG ALA HIS ASP PRO SER VAL ARG PRO SER VAL ASP GLU SEQRES 22 A 283 ILE LEU LYS LYS LEU SER THR PHE SER LYS HET 6UY A 501 27 HETNAM 6UY [(1~{R})-2-[(4-FLUOROPHENYL)AMINO]-2-OXIDANYLIDENE-1- HETNAM 2 6UY PHENYL-ETHYL] 3-AZANYLPYRAZINE-2-CARBOXYLATE FORMUL 2 6UY C19 H15 F N4 O3 FORMUL 3 HOH *130(H2 O) HELIX 1 AA1 SER A 239 PHE A 257 1 19 HELIX 2 AA2 LEU A 291 GLU A 298 1 8 HELIX 3 AA3 THR A 302 SER A 323 1 22 HELIX 4 AA4 ARG A 333 SER A 335 5 3 HELIX 5 AA5 LYS A 372 LEU A 377 5 6 HELIX 6 AA6 SER A 378 ASP A 384 1 7 HELIX 7 AA7 ASP A 390 GLY A 408 1 19 HELIX 8 AA8 ASN A 416 VAL A 426 1 11 HELIX 9 AA9 PRO A 438 ARG A 449 1 12 HELIX 10 AB1 ASP A 452 ARG A 456 5 5 HELIX 11 AB2 SER A 458 THR A 468 1 11 SHEET 1 AA1 5 ILE A 207 GLU A 211 0 SHEET 2 AA1 5 SER A 215 TYR A 222 -1 O LEU A 217 N LEU A 209 SHEET 3 AA1 5 ALA A 225 PHE A 232 -1 O VAL A 231 N THR A 216 SHEET 4 AA1 5 GLN A 278 GLU A 284 -1 O MET A 283 N ALA A 228 SHEET 5 AA1 5 ILE A 265 ASP A 271 -1 N GLY A 267 O VAL A 282 SHEET 1 AA2 3 GLY A 289 THR A 290 0 SHEET 2 AA2 3 PHE A 337 VAL A 339 -1 O VAL A 339 N GLY A 289 SHEET 3 AA2 3 VAL A 345 LEU A 347 -1 O LYS A 346 N LEU A 338 CISPEP 1 THR A 275 PRO A 276 0 -17.74 SITE 1 AC1 18 ARG A 210 GLU A 211 ASN A 212 SER A 215 SITE 2 AC1 18 LEU A 217 ALA A 228 LYS A 230 GLU A 250 SITE 3 AC1 18 MET A 283 GLU A 284 CYS A 286 SER A 335 SITE 4 AC1 18 ASN A 336 LEU A 338 ALA A 348 GLY A 349 SITE 5 AC1 18 HOH A 631 HOH A 683 CRYST1 71.400 74.880 127.070 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014006 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013355 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007870 0.00000