PDB Short entry for 5LOU HEADER HYDROLASE 10-AUG-16 5LOU TITLE HUMAN NUDT22 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 22; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NUDIX MOTIF 22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUDT22, PP11246; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS NUDIX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.CARTER,P.STENMARK REVDAT 3 27-MAR-19 5LOU 1 JRNL REVDAT 2 20-FEB-19 5LOU 1 REMARK LINK REVDAT 1 13-SEP-17 5LOU 0 JRNL AUTH M.CARTER,A.S.JEMTH,J.CARRERAS-PUIGVERT,P.HERR, JRNL AUTH 2 M.MARTINEZ CARRANZA,K.S.A.VALLIN,A.THROUP,T.HELLEDAY, JRNL AUTH 3 P.STENMARK JRNL TITL HUMAN NUDT22 IS A UDP-GLUCOSE/GALACTOSE HYDROLASE EXHIBITING JRNL TITL 2 A UNIQUE STRUCTURAL FOLD. JRNL REF STRUCTURE V. 26 295 2018 JRNL REFN ISSN 0969-2126 JRNL PMID 29413322 JRNL DOI 10.1016/J.STR.2018.01.004 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 53860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0009 - 4.8006 1.00 2823 149 0.1882 0.2410 REMARK 3 2 4.8006 - 3.8108 1.00 2742 144 0.1498 0.1747 REMARK 3 3 3.8108 - 3.3292 1.00 2714 143 0.1754 0.2096 REMARK 3 4 3.3292 - 3.0249 1.00 2728 144 0.1976 0.2456 REMARK 3 5 3.0249 - 2.8081 1.00 2692 142 0.2040 0.2626 REMARK 3 6 2.8081 - 2.6426 1.00 2717 142 0.2057 0.2321 REMARK 3 7 2.6426 - 2.5102 1.00 2681 142 0.2000 0.2822 REMARK 3 8 2.5102 - 2.4010 1.00 2699 142 0.2086 0.2687 REMARK 3 9 2.4010 - 2.3085 1.00 2682 141 0.2152 0.2445 REMARK 3 10 2.3085 - 2.2289 1.00 2676 141 0.2138 0.2320 REMARK 3 11 2.2289 - 2.1592 1.00 2704 142 0.2270 0.2838 REMARK 3 12 2.1592 - 2.0975 1.00 2673 141 0.2261 0.2835 REMARK 3 13 2.0975 - 2.0422 1.00 2681 141 0.2329 0.2895 REMARK 3 14 2.0422 - 1.9924 1.00 2692 142 0.2403 0.2579 REMARK 3 15 1.9924 - 1.9471 1.00 2619 136 0.2533 0.3320 REMARK 3 16 1.9471 - 1.9057 1.00 2733 144 0.2633 0.3310 REMARK 3 17 1.9057 - 1.8676 1.00 2665 140 0.2829 0.2963 REMARK 3 18 1.8676 - 1.8323 1.00 2686 142 0.2876 0.3001 REMARK 3 19 1.8323 - 1.7996 0.98 2560 135 0.3064 0.3461 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4575 REMARK 3 ANGLE : 1.109 6244 REMARK 3 CHIRALITY : 0.205 699 REMARK 3 PLANARITY : 0.005 826 REMARK 3 DIHEDRAL : 16.059 1660 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LOU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1200001118. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53860 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.170 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.19 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M SODIUM PHOSPHATE MONOBASIC, 0.8M REMARK 280 POTASSIUM PHOSPHATE DIBASIC, PH 6.1, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.43550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 GLY A -25 REMARK 465 SER A -24 REMARK 465 SER A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 LEU A -13 REMARK 465 VAL A -12 REMARK 465 PRO A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 MET A -6 REMARK 465 SER A -5 REMARK 465 CYS A -4 REMARK 465 PRO A -3 REMARK 465 VAL A -2 REMARK 465 GLN A -1 REMARK 465 THR A 0 REMARK 465 GLN A 160 REMARK 465 ALA A 161 REMARK 465 LEU A 162 REMARK 465 CYS A 163 REMARK 465 PRO A 164 REMARK 465 GLY A 165 REMARK 465 GLY A 166 REMARK 465 SER A 167 REMARK 465 PRO A 168 REMARK 465 GLN A 169 REMARK 465 HIS A 170 REMARK 465 GLN A 171 REMARK 465 ASP A 172 REMARK 465 LEU A 299 REMARK 465 LEU A 300 REMARK 465 PRO A 301 REMARK 465 PRO A 302 REMARK 465 LEU A 303 REMARK 465 MET B -26 REMARK 465 GLY B -25 REMARK 465 SER B -24 REMARK 465 SER B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B 287 REMARK 465 SER B 288 REMARK 465 PRO B 289 REMARK 465 THR B 290 REMARK 465 GLY B 291 REMARK 465 ALA B 292 REMARK 465 ALA B 293 REMARK 465 LEU B 294 REMARK 465 GLY B 295 REMARK 465 SER B 296 REMARK 465 PRO B 297 REMARK 465 ALA B 298 REMARK 465 LEU B 299 REMARK 465 LEU B 300 REMARK 465 PRO B 301 REMARK 465 PRO B 302 REMARK 465 LEU B 303 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 162 CG CD1 CD2 REMARK 470 CYS B 163 SG REMARK 470 PRO B 164 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD2 LEU A 263 CZ2 TRP A 268 1.67 REMARK 500 SD MET B 1 CD1 LEU B 263 1.67 REMARK 500 CD2 LEU A 263 CE2 TRP A 268 1.79 REMARK 500 O HOH A 604 O HOH A 625 1.86 REMARK 500 O HOH A 545 O HOH A 613 1.90 REMARK 500 CD2 LEU A 263 CH2 TRP A 268 1.93 REMARK 500 O HOH B 650 O HOH B 658 1.96 REMARK 500 O HOH B 555 O HOH B 641 1.99 REMARK 500 CD2 LEU B 263 CE2 TRP B 268 2.00 REMARK 500 O HOH A 602 O HOH A 673 2.01 REMARK 500 CE MET A 1 CD1 LEU A 263 2.04 REMARK 500 O GLY B 111 O HOH B 501 2.05 REMARK 500 OE1 GLU A 46 O HOH A 501 2.05 REMARK 500 O HOH A 614 O HOH A 670 2.06 REMARK 500 O HOH B 518 O HOH B 626 2.08 REMARK 500 O GLY A 75 O HOH A 502 2.11 REMARK 500 O HOH A 635 O HOH B 533 2.12 REMARK 500 O HOH A 642 O HOH A 650 2.13 REMARK 500 O HOH B 623 O HOH B 654 2.13 REMARK 500 O HOH B 663 O HOH B 664 2.13 REMARK 500 O PRO A 159 O HOH A 503 2.14 REMARK 500 O HOH B 555 O HOH B 620 2.16 REMARK 500 OE1 GLU A 145 O HOH A 504 2.17 REMARK 500 CD2 LEU B 263 CZ2 TRP B 268 2.18 REMARK 500 O PRO B 168 O HOH B 502 2.19 REMARK 500 O ALA A 298 O HOH A 505 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 504 O HOH B 507 1565 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 164 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 93 -76.57 -128.43 REMARK 500 ASP A 132 60.04 61.37 REMARK 500 GLN A 286 158.22 74.59 REMARK 500 PRO B 35 4.91 -64.77 REMARK 500 THR B 85 -159.34 -147.63 REMARK 500 THR B 93 -71.15 -128.62 REMARK 500 ASP B 132 44.14 71.64 REMARK 500 GLU B 247 -71.20 -50.35 REMARK 500 VAL B 285 -157.80 -89.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 682 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH B 674 DISTANCE = 5.90 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide MET B 1 and LEU B REMARK 800 263 DBREF 5LOU A 1 303 UNP Q9BRQ3 NUD22_HUMAN 1 303 DBREF 5LOU B 1 303 UNP Q9BRQ3 NUD22_HUMAN 1 303 SEQADV 5LOU MET A -26 UNP Q9BRQ3 INITIATING METHIONINE SEQADV 5LOU GLY A -25 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER A -24 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER A -23 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS A -22 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS A -21 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS A -20 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS A -19 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS A -18 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS A -17 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER A -16 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER A -15 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU GLY A -14 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU LEU A -13 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU VAL A -12 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU PRO A -11 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU ARG A -10 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU GLY A -9 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER A -8 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS A -7 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU MET A -6 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER A -5 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU CYS A -4 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU PRO A -3 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU VAL A -2 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU GLN A -1 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU THR A 0 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU MET B -26 UNP Q9BRQ3 INITIATING METHIONINE SEQADV 5LOU GLY B -25 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER B -24 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER B -23 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS B -22 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS B -21 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS B -20 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS B -19 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS B -18 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS B -17 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER B -16 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER B -15 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU GLY B -14 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU LEU B -13 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU VAL B -12 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU PRO B -11 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU ARG B -10 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU GLY B -9 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER B -8 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU HIS B -7 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU MET B -6 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU SER B -5 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU CYS B -4 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU PRO B -3 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU VAL B -2 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU GLN B -1 UNP Q9BRQ3 EXPRESSION TAG SEQADV 5LOU THR B 0 UNP Q9BRQ3 EXPRESSION TAG SEQRES 1 A 330 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 330 LEU VAL PRO ARG GLY SER HIS MET SER CYS PRO VAL GLN SEQRES 3 A 330 THR MET ASP PRO GLU VAL THR LEU LEU LEU GLN CYS PRO SEQRES 4 A 330 GLY GLY GLY LEU PRO GLN GLU GLN ILE GLN ALA GLU LEU SEQRES 5 A 330 SER PRO ALA HIS ASP ARG ARG PRO LEU PRO GLY GLY ASP SEQRES 6 A 330 GLU ALA ILE THR ALA ILE TRP GLU THR ARG LEU LYS ALA SEQRES 7 A 330 GLN PRO TRP LEU PHE ASP ALA PRO LYS PHE ARG LEU HIS SEQRES 8 A 330 SER ALA THR LEU ALA PRO ILE GLY SER ARG GLY PRO GLN SEQRES 9 A 330 LEU LEU LEU ARG LEU GLY LEU THR SER TYR ARG ASP PHE SEQRES 10 A 330 LEU GLY THR ASN TRP SER SER SER ALA ALA TRP LEU ARG SEQRES 11 A 330 GLN GLN GLY ALA THR ASP TRP GLY ASP THR GLN ALA TYR SEQRES 12 A 330 LEU ALA ASP PRO LEU GLY VAL GLY ALA ALA LEU ALA THR SEQRES 13 A 330 ALA ASP ASP PHE LEU VAL PHE LEU ARG ARG SER ARG GLN SEQRES 14 A 330 VAL ALA GLU ALA PRO GLY LEU VAL ASP VAL PRO GLY GLY SEQRES 15 A 330 HIS PRO GLU PRO GLN ALA LEU CYS PRO GLY GLY SER PRO SEQRES 16 A 330 GLN HIS GLN ASP LEU ALA GLY GLN LEU VAL VAL HIS GLU SEQRES 17 A 330 LEU PHE SER SER VAL LEU GLN GLU ILE CYS ASP GLU VAL SEQRES 18 A 330 ASN LEU PRO LEU LEU THR LEU SER GLN PRO LEU LEU LEU SEQRES 19 A 330 GLY ILE ALA ARG ASN GLU THR SER ALA GLY ARG ALA SER SEQRES 20 A 330 ALA GLU PHE TYR VAL GLN CYS SER LEU THR SER GLU GLN SEQRES 21 A 330 VAL ARG LYS HIS TYR LEU SER GLY GLY PRO GLU ALA HIS SEQRES 22 A 330 GLU SER THR GLY ILE PHE PHE VAL GLU THR GLN ASN VAL SEQRES 23 A 330 GLN ARG LEU LEU GLU THR GLU MET TRP ALA GLU LEU CYS SEQRES 24 A 330 PRO SER ALA LYS GLY ALA ILE ILE LEU TYR ASN ARG VAL SEQRES 25 A 330 GLN GLY SER PRO THR GLY ALA ALA LEU GLY SER PRO ALA SEQRES 26 A 330 LEU LEU PRO PRO LEU SEQRES 1 B 330 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 330 LEU VAL PRO ARG GLY SER HIS MET SER CYS PRO VAL GLN SEQRES 3 B 330 THR MET ASP PRO GLU VAL THR LEU LEU LEU GLN CYS PRO SEQRES 4 B 330 GLY GLY GLY LEU PRO GLN GLU GLN ILE GLN ALA GLU LEU SEQRES 5 B 330 SER PRO ALA HIS ASP ARG ARG PRO LEU PRO GLY GLY ASP SEQRES 6 B 330 GLU ALA ILE THR ALA ILE TRP GLU THR ARG LEU LYS ALA SEQRES 7 B 330 GLN PRO TRP LEU PHE ASP ALA PRO LYS PHE ARG LEU HIS SEQRES 8 B 330 SER ALA THR LEU ALA PRO ILE GLY SER ARG GLY PRO GLN SEQRES 9 B 330 LEU LEU LEU ARG LEU GLY LEU THR SER TYR ARG ASP PHE SEQRES 10 B 330 LEU GLY THR ASN TRP SER SER SER ALA ALA TRP LEU ARG SEQRES 11 B 330 GLN GLN GLY ALA THR ASP TRP GLY ASP THR GLN ALA TYR SEQRES 12 B 330 LEU ALA ASP PRO LEU GLY VAL GLY ALA ALA LEU ALA THR SEQRES 13 B 330 ALA ASP ASP PHE LEU VAL PHE LEU ARG ARG SER ARG GLN SEQRES 14 B 330 VAL ALA GLU ALA PRO GLY LEU VAL ASP VAL PRO GLY GLY SEQRES 15 B 330 HIS PRO GLU PRO GLN ALA LEU CYS PRO GLY GLY SER PRO SEQRES 16 B 330 GLN HIS GLN ASP LEU ALA GLY GLN LEU VAL VAL HIS GLU SEQRES 17 B 330 LEU PHE SER SER VAL LEU GLN GLU ILE CYS ASP GLU VAL SEQRES 18 B 330 ASN LEU PRO LEU LEU THR LEU SER GLN PRO LEU LEU LEU SEQRES 19 B 330 GLY ILE ALA ARG ASN GLU THR SER ALA GLY ARG ALA SER SEQRES 20 B 330 ALA GLU PHE TYR VAL GLN CYS SER LEU THR SER GLU GLN SEQRES 21 B 330 VAL ARG LYS HIS TYR LEU SER GLY GLY PRO GLU ALA HIS SEQRES 22 B 330 GLU SER THR GLY ILE PHE PHE VAL GLU THR GLN ASN VAL SEQRES 23 B 330 GLN ARG LEU LEU GLU THR GLU MET TRP ALA GLU LEU CYS SEQRES 24 B 330 PRO SER ALA LYS GLY ALA ILE ILE LEU TYR ASN ARG VAL SEQRES 25 B 330 GLN GLY SER PRO THR GLY ALA ALA LEU GLY SER PRO ALA SEQRES 26 B 330 LEU LEU PRO PRO LEU HET PO4 A 401 5 HET PO4 B 401 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *356(H2 O) HELIX 1 AA1 PRO A 27 ASP A 30 5 4 HELIX 2 AA2 ASP A 38 GLN A 52 1 15 HELIX 3 AA3 TYR A 87 THR A 93 1 7 HELIX 4 AA4 SER A 98 GLY A 111 1 14 HELIX 5 AA5 ALA A 174 VAL A 194 1 21 HELIX 6 AA6 PRO A 197 LEU A 201 5 5 HELIX 7 AA7 THR A 214 ALA A 216 5 3 HELIX 8 AA8 THR A 230 SER A 240 1 11 HELIX 9 AA9 GLY A 241 HIS A 246 5 6 HELIX 10 AB1 THR A 256 GLN A 260 1 5 HELIX 11 AB2 ARG A 261 THR A 265 5 5 HELIX 12 AB3 MET A 267 LEU A 271 5 5 HELIX 13 AB4 CYS A 272 GLN A 286 1 15 HELIX 14 AB5 ALA A 292 SER A 296 5 5 HELIX 15 AB6 PRO B 17 GLU B 19 5 3 HELIX 16 AB7 PRO B 27 ASP B 30 5 4 HELIX 17 AB8 ASP B 38 GLN B 52 1 15 HELIX 18 AB9 TYR B 87 THR B 93 1 7 HELIX 19 AC1 SER B 98 GLY B 111 1 14 HELIX 20 AC2 GLU B 158 LEU B 162 5 5 HELIX 21 AC3 GLN B 169 LEU B 173 5 5 HELIX 22 AC4 ALA B 174 VAL B 194 1 21 HELIX 23 AC5 PRO B 197 LEU B 201 5 5 HELIX 24 AC6 THR B 214 ALA B 216 5 3 HELIX 25 AC7 THR B 230 SER B 240 1 11 HELIX 26 AC8 THR B 256 GLN B 260 1 5 HELIX 27 AC9 ARG B 261 THR B 265 5 5 HELIX 28 AD1 MET B 267 LEU B 271 5 5 HELIX 29 AD2 CYS B 272 VAL B 285 1 14 SHEET 1 AA1 3 VAL A 5 GLN A 10 0 SHEET 2 AA1 3 LEU A 205 ASN A 212 -1 O ARG A 211 N THR A 6 SHEET 3 AA1 3 LEU A 16 PRO A 17 -1 N LEU A 16 O LEU A 206 SHEET 1 AA2 4 VAL A 5 GLN A 10 0 SHEET 2 AA2 4 LEU A 205 ASN A 212 -1 O ARG A 211 N THR A 6 SHEET 3 AA2 4 ALA A 219 GLN A 226 -1 O GLU A 222 N LEU A 207 SHEET 4 AA2 4 GLY A 122 ALA A 128 1 N ALA A 126 O PHE A 223 SHEET 1 AA3 3 ILE A 21 LEU A 25 0 SHEET 2 AA3 3 LEU A 78 SER A 86 1 O LEU A 80 N GLU A 24 SHEET 3 AA3 3 PRO A 59 LEU A 68 -1 N SER A 65 O ARG A 81 SHEET 1 AA4 3 VAL A 150 ASP A 151 0 SHEET 2 AA4 3 PHE A 133 ARG A 138 -1 N LEU A 137 O ASP A 151 SHEET 3 AA4 3 GLY A 250 GLU A 255 -1 O VAL A 254 N LEU A 134 SHEET 1 AA5 5 VAL B -2 GLN B -1 0 SHEET 2 AA5 5 VAL B 5 GLN B 10 -1 O LEU B 7 N VAL B -2 SHEET 3 AA5 5 LEU B 205 ASN B 212 -1 O ARG B 211 N THR B 6 SHEET 4 AA5 5 ALA B 219 GLN B 226 -1 O GLU B 222 N LEU B 207 SHEET 5 AA5 5 GLY B 122 ALA B 128 1 N ALA B 126 O PHE B 223 SHEET 1 AA6 3 ILE B 21 LEU B 25 0 SHEET 2 AA6 3 LEU B 78 SER B 86 1 O LEU B 82 N GLU B 24 SHEET 3 AA6 3 PRO B 59 LEU B 68 -1 N SER B 65 O ARG B 81 SHEET 1 AA7 3 VAL B 150 ASP B 151 0 SHEET 2 AA7 3 PHE B 133 ARG B 138 -1 N LEU B 137 O ASP B 151 SHEET 3 AA7 3 ILE B 251 GLU B 255 -1 O PHE B 252 N PHE B 136 CISPEP 1 PRO A 35 GLY A 36 0 -2.80 CISPEP 2 PRO B 164 GLY B 165 0 -1.50 CISPEP 3 GLY B 242 PRO B 243 0 0.24 SITE 1 AC1 9 LYS A 60 GLY A 155 HIS A 156 ARG A 218 SITE 2 AC1 9 HOH A 513 HOH A 531 HOH A 595 HOH A 604 SITE 3 AC1 9 HOH A 625 SITE 1 AC2 10 LYS B 60 GLY B 155 HIS B 156 PRO B 157 SITE 2 AC2 10 ARG B 218 HOH B 522 HOH B 527 HOH B 538 SITE 3 AC2 10 HOH B 559 HOH B 611 SITE 1 AC3 8 THR B 0 ASP B 2 ARG B 261 LEU B 262 SITE 2 AC3 8 GLU B 264 THR B 265 TRP B 268 ILE B 280 CRYST1 52.213 46.871 119.606 90.00 93.92 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019152 0.000000 0.001311 0.00000 SCALE2 0.000000 0.021335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008380 0.00000