PDB Short entry for 5LXM HEADER TRANSFERASE 22-SEP-16 5LXM TITLE CRYSTAL STRUCTURE OF AURORA-A BOUND TO A HYDROCARBON-STAPLED TITLE 2 PROTEOMIMETIC OF TPX2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,HARK1,BREAST TUMOR- COMPND 5 AMPLIFIED KINASE,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE- COMPND 6 PROTEIN KINASE 6,SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: TARGETING PROTEIN FOR XKLP2; COMPND 12 CHAIN: D; COMPND 13 SYNONYM: DIFFERENTIALLY EXPRESSED IN CANCEROUS AND NON-CANCEROUS LUNG COMPND 14 CELLS 2,DIL-2,HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 519, COMPND 15 HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 90,PROTEIN FLS353, COMPND 16 RESTRICTED EXPRESSION PROLIFERATION-ASSOCIATED PROTEIN 100,P100; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS PROTEIN KINASE, PROTEOMIMETIC, STAPLED HELIX PEPTIDE, MITOSIS, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.MCINTYRE,R.BAYLISS REVDAT 5 07-FEB-24 5LXM 1 REMARK LINK REVDAT 4 16-OCT-19 5LXM 1 REMARK REVDAT 3 13-SEP-17 5LXM 1 REMARK REVDAT 2 28-DEC-16 5LXM 1 JRNL REVDAT 1 02-NOV-16 5LXM 0 JRNL AUTH Y.K.RENNIE,P.J.MCINTYRE,T.AKINDELE,R.BAYLISS,A.G.JAMIESON JRNL TITL A TPX2 PROTEOMIMETIC HAS ENHANCED AFFINITY FOR AURORA-A DUE JRNL TITL 2 TO HYDROCARBON STAPLING OF A HELIX. JRNL REF ACS CHEM. BIOL. V. 11 3383 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 27775325 JRNL DOI 10.1021/ACSCHEMBIO.6B00727 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 31526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3288 -0.4605 4.9321 REMARK 3 T TENSOR REMARK 3 T11: 1.2402 T22: 1.0177 REMARK 3 T33: 0.4606 T12: 0.4579 REMARK 3 T13: 0.0547 T23: 0.0368 REMARK 3 L TENSOR REMARK 3 L11: 2.5061 L22: 1.4398 REMARK 3 L33: 9.2684 L12: 1.6527 REMARK 3 L13: 0.9430 L23: 0.1678 REMARK 3 S TENSOR REMARK 3 S11: 0.6606 S12: 1.4377 S13: 0.1701 REMARK 3 S21: -1.0330 S22: -0.4275 S23: 0.0909 REMARK 3 S31: -1.5824 S32: 0.2503 S33: -0.1914 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.4526 -1.9274 6.1031 REMARK 3 T TENSOR REMARK 3 T11: 0.9790 T22: 0.6515 REMARK 3 T33: 0.3662 T12: 0.2053 REMARK 3 T13: 0.1308 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 7.4140 L22: 4.6060 REMARK 3 L33: 7.2480 L12: -2.2399 REMARK 3 L13: 2.4045 L23: -0.1056 REMARK 3 S TENSOR REMARK 3 S11: 0.1488 S12: 0.7824 S13: 0.3781 REMARK 3 S21: -0.3136 S22: -0.1934 S23: 0.0927 REMARK 3 S31: -1.6278 S32: -0.7413 S33: 0.1519 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.7404 -14.5040 2.2049 REMARK 3 T TENSOR REMARK 3 T11: 0.6390 T22: 0.8040 REMARK 3 T33: 0.3466 T12: 0.1894 REMARK 3 T13: 0.0527 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 4.0051 L22: 4.8779 REMARK 3 L33: 5.6751 L12: -1.0571 REMARK 3 L13: -3.6942 L23: -0.5861 REMARK 3 S TENSOR REMARK 3 S11: 0.4328 S12: 0.8040 S13: 0.0535 REMARK 3 S21: -0.7920 S22: -0.5265 S23: -0.2232 REMARK 3 S31: -0.8537 S32: -0.4889 S33: 0.0919 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2690 -9.7729 17.1404 REMARK 3 T TENSOR REMARK 3 T11: 0.7123 T22: 0.6470 REMARK 3 T33: 0.3808 T12: 0.1113 REMARK 3 T13: 0.0485 T23: -0.0577 REMARK 3 L TENSOR REMARK 3 L11: 3.0054 L22: 4.1290 REMARK 3 L33: 8.0559 L12: -1.9471 REMARK 3 L13: -2.7790 L23: -2.1541 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: 0.0012 S13: 0.1690 REMARK 3 S21: 0.6573 S22: -0.0872 S23: 0.1588 REMARK 3 S31: -0.8531 S32: 0.1678 S33: 0.0029 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.1669 -26.6159 16.4901 REMARK 3 T TENSOR REMARK 3 T11: 0.3625 T22: 0.4838 REMARK 3 T33: 0.5146 T12: 0.0189 REMARK 3 T13: 0.0728 T23: -0.1451 REMARK 3 L TENSOR REMARK 3 L11: 6.9728 L22: 4.6476 REMARK 3 L33: 8.8121 L12: 0.1430 REMARK 3 L13: 1.3372 L23: -3.2212 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: 0.8399 S13: -0.8983 REMARK 3 S21: 0.3546 S22: -0.1145 S23: 0.5168 REMARK 3 S31: 0.0636 S32: -1.4266 S33: 0.1226 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 251 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.3099 -19.1357 14.3136 REMARK 3 T TENSOR REMARK 3 T11: 0.5541 T22: 0.5171 REMARK 3 T33: 0.3559 T12: 0.0565 REMARK 3 T13: 0.0611 T23: -0.0425 REMARK 3 L TENSOR REMARK 3 L11: 7.3088 L22: 5.9213 REMARK 3 L33: 8.2372 L12: -6.5604 REMARK 3 L13: -6.3273 L23: 6.5726 REMARK 3 S TENSOR REMARK 3 S11: -0.2356 S12: 0.0219 S13: -0.0580 REMARK 3 S21: 0.4981 S22: 0.1933 S23: -0.0384 REMARK 3 S31: 0.0304 S32: 0.0752 S33: -0.0530 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 270 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.8994 -23.3001 6.6908 REMARK 3 T TENSOR REMARK 3 T11: 0.3944 T22: 0.8374 REMARK 3 T33: 0.3070 T12: 0.0421 REMARK 3 T13: -0.0440 T23: -0.1225 REMARK 3 L TENSOR REMARK 3 L11: 5.7880 L22: 3.4650 REMARK 3 L33: 5.0774 L12: -3.2392 REMARK 3 L13: -2.4357 L23: -0.2685 REMARK 3 S TENSOR REMARK 3 S11: 0.3587 S12: 1.1181 S13: -0.1583 REMARK 3 S21: -0.0895 S22: -0.4680 S23: -0.0572 REMARK 3 S31: -0.3247 S32: 0.3108 S33: 0.1401 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 293 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.3319 -26.8770 18.7879 REMARK 3 T TENSOR REMARK 3 T11: 0.5148 T22: 0.5528 REMARK 3 T33: 0.3585 T12: 0.0388 REMARK 3 T13: 0.0385 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 7.0177 L22: 3.7890 REMARK 3 L33: 2.8578 L12: -1.5462 REMARK 3 L13: -1.3636 L23: -1.6163 REMARK 3 S TENSOR REMARK 3 S11: -0.4241 S12: 0.0854 S13: -0.3772 REMARK 3 S21: 0.4294 S22: -0.0489 S23: 0.0865 REMARK 3 S31: -0.2026 S32: 0.0712 S33: 0.4253 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 325 THROUGH 343 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.8247 -22.7575 27.3874 REMARK 3 T TENSOR REMARK 3 T11: 0.8344 T22: 0.6983 REMARK 3 T33: 0.4445 T12: 0.0766 REMARK 3 T13: -0.1420 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 9.6347 L22: 8.2205 REMARK 3 L33: 3.3593 L12: -4.3188 REMARK 3 L13: -3.1339 L23: 0.5506 REMARK 3 S TENSOR REMARK 3 S11: -0.4598 S12: -0.3734 S13: 1.0283 REMARK 3 S21: 1.3912 S22: 0.2501 S23: -1.0344 REMARK 3 S31: -0.1340 S32: 0.8045 S33: 0.2256 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 344 THROUGH 363 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.1755 -32.4961 31.0889 REMARK 3 T TENSOR REMARK 3 T11: 0.9624 T22: 0.6216 REMARK 3 T33: 0.4940 T12: 0.2751 REMARK 3 T13: 0.1735 T23: 0.0748 REMARK 3 L TENSOR REMARK 3 L11: 8.0290 L22: 4.1471 REMARK 3 L33: 6.3059 L12: 2.8623 REMARK 3 L13: -3.6624 L23: -3.1142 REMARK 3 S TENSOR REMARK 3 S11: -0.5826 S12: -1.2020 S13: -0.4722 REMARK 3 S21: 1.0263 S22: 0.2523 S23: 0.2063 REMARK 3 S31: 0.1075 S32: 0.1610 S33: 0.2915 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 364 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.8878 -34.8757 19.7330 REMARK 3 T TENSOR REMARK 3 T11: 0.6314 T22: 0.4023 REMARK 3 T33: 0.6239 T12: -0.0737 REMARK 3 T13: 0.2150 T23: -0.1316 REMARK 3 L TENSOR REMARK 3 L11: 3.2405 L22: 4.1690 REMARK 3 L33: 9.1654 L12: -2.2350 REMARK 3 L13: -3.8145 L23: 0.3629 REMARK 3 S TENSOR REMARK 3 S11: -0.3765 S12: 0.9076 S13: -1.5239 REMARK 3 S21: 0.7212 S22: 0.0093 S23: 0.8896 REMARK 3 S31: 0.8306 S32: -0.9730 S33: 0.4601 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 6 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.0643 -8.9193 -5.8914 REMARK 3 T TENSOR REMARK 3 T11: 1.0472 T22: 1.1517 REMARK 3 T33: 0.6666 T12: -0.0178 REMARK 3 T13: 0.3465 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 2.8199 L22: 6.2261 REMARK 3 L33: 6.5969 L12: -1.4471 REMARK 3 L13: -2.1307 L23: -4.0982 REMARK 3 S TENSOR REMARK 3 S11: 0.8717 S12: 2.7928 S13: -0.4633 REMARK 3 S21: -3.2333 S22: 0.3918 S23: -2.2087 REMARK 3 S31: -2.8133 S32: 0.1009 S33: -1.4791 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 11 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1666 -11.3314 -3.6083 REMARK 3 T TENSOR REMARK 3 T11: 0.9483 T22: 1.7635 REMARK 3 T33: 0.6268 T12: 0.2431 REMARK 3 T13: -0.0275 T23: -0.2136 REMARK 3 L TENSOR REMARK 3 L11: 2.2457 L22: 6.6810 REMARK 3 L33: 3.2309 L12: -1.3224 REMARK 3 L13: 2.3754 L23: -0.7533 REMARK 3 S TENSOR REMARK 3 S11: 0.0521 S12: 0.6747 S13: -0.0416 REMARK 3 S21: -0.4256 S22: -0.6806 S23: 1.3814 REMARK 3 S31: 0.5661 S32: -0.6815 S33: 0.5041 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 31 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.0302 -26.0654 -6.7796 REMARK 3 T TENSOR REMARK 3 T11: 0.4946 T22: 1.2702 REMARK 3 T33: 0.4645 T12: 0.1410 REMARK 3 T13: -0.0294 T23: -0.2137 REMARK 3 L TENSOR REMARK 3 L11: 6.5902 L22: 8.9596 REMARK 3 L33: 6.8846 L12: -6.5617 REMARK 3 L13: -6.8137 L23: 6.0179 REMARK 3 S TENSOR REMARK 3 S11: 0.4102 S12: -0.6725 S13: -0.7575 REMARK 3 S21: -0.2491 S22: -1.0850 S23: 0.5542 REMARK 3 S31: -0.2808 S32: -1.6172 S33: 0.6534 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LXM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001525. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31554 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 61.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4CEG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS CRYSTALLIZATION SCREEN REMARK 280 CONDITION C1, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.75333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.50667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.50667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.75333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 121 REMARK 465 GLU A 122 REMARK 465 SER A 123 REMARK 465 LYS A 124 REMARK 465 LYS A 125 REMARK 465 ALA A 393 REMARK 465 GLN A 394 REMARK 465 ASN A 395 REMARK 465 LYS A 396 REMARK 465 GLU A 397 REMARK 465 SER A 398 REMARK 465 ALA A 399 REMARK 465 SER A 400 REMARK 465 LYS A 401 REMARK 465 GLN A 402 REMARK 465 SER A 403 REMARK 465 ASP D 23 REMARK 465 ASP D 24 REMARK 465 GLU D 25 REMARK 465 GLY D 26 REMARK 465 ASP D 27 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 GLN A 168 CD OE1 NE2 REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 ARG A 220 CD NE CZ NH1 NH2 REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 LYS A 326 CD CE NZ REMARK 470 LYS A 339 NZ REMARK 470 GLU A 354 CG CD OE1 OE2 REMARK 470 ARG A 375 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 389 CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 TYR A 334 CE1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN D 30 OG SER D 33 2.14 REMARK 500 OH TYR A 295 OE1 GLU A 321 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 202 35.77 -146.31 REMARK 500 THR A 204 -42.42 -135.11 REMARK 500 SER A 226 -45.50 66.56 REMARK 500 ASP A 256 41.36 -142.20 REMARK 500 ASP A 274 80.97 54.70 REMARK 500 PHE A 275 30.12 -90.80 REMARK 500 SER A 283 55.87 -142.63 REMARK 500 SER A 284 143.77 -171.46 REMARK 500 LEU A 289 96.09 -68.89 REMARK 500 ASP A 307 -153.06 -133.84 REMARK 500 LEU A 364 41.54 -99.58 REMARK 500 SER D 21 -70.65 -72.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 509 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 261 OD1 REMARK 620 2 ASP A 274 OD2 75.1 REMARK 620 3 ADP A 501 O3B 164.4 90.0 REMARK 620 4 ADP A 501 O2A 87.5 82.0 85.9 REMARK 620 5 HOH A 651 O 93.7 83.5 89.0 164.6 REMARK 620 6 HOH A 654 O 79.9 154.1 114.3 90.6 104.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 510 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 274 OD1 REMARK 620 2 ADP A 501 O1B 70.7 REMARK 620 3 PEG A 505 O4 134.9 74.6 REMARK 620 4 HOH A 631 O 73.1 127.7 151.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P4G A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH3 D 101 DBREF 5LXM A 122 403 UNP O14965 AURKA_HUMAN 122 403 DBREF 5LXM D 6 43 UNP Q9ULW0 TPX2_HUMAN 6 43 SEQADV 5LXM MET A 121 UNP O14965 INITIATING METHIONINE SEQADV 5LXM ALA A 290 UNP O14965 CYS 290 ENGINEERED MUTATION SEQADV 5LXM ALA A 393 UNP O14965 CYS 393 ENGINEERED MUTATION SEQRES 1 A 283 MET GLU SER LYS LYS ARG GLN TRP ALA LEU GLU ASP PHE SEQRES 2 A 283 GLU ILE GLY ARG PRO LEU GLY LYS GLY LYS PHE GLY ASN SEQRES 3 A 283 VAL TYR LEU ALA ARG GLU LYS GLN SER LYS PHE ILE LEU SEQRES 4 A 283 ALA LEU LYS VAL LEU PHE LYS ALA GLN LEU GLU LYS ALA SEQRES 5 A 283 GLY VAL GLU HIS GLN LEU ARG ARG GLU VAL GLU ILE GLN SEQRES 6 A 283 SER HIS LEU ARG HIS PRO ASN ILE LEU ARG LEU TYR GLY SEQRES 7 A 283 TYR PHE HIS ASP ALA THR ARG VAL TYR LEU ILE LEU GLU SEQRES 8 A 283 TYR ALA PRO LEU GLY THR VAL TYR ARG GLU LEU GLN LYS SEQRES 9 A 283 LEU SER LYS PHE ASP GLU GLN ARG THR ALA THR TYR ILE SEQRES 10 A 283 THR GLU LEU ALA ASN ALA LEU SER TYR CYS HIS SER LYS SEQRES 11 A 283 ARG VAL ILE HIS ARG ASP ILE LYS PRO GLU ASN LEU LEU SEQRES 12 A 283 LEU GLY SER ALA GLY GLU LEU LYS ILE ALA ASP PHE GLY SEQRES 13 A 283 TRP SER VAL HIS ALA PRO SER SER ARG ARG THR TPO LEU SEQRES 14 A 283 ALA GLY THR LEU ASP TYR LEU PRO PRO GLU MET ILE GLU SEQRES 15 A 283 GLY ARG MET HIS ASP GLU LYS VAL ASP LEU TRP SER LEU SEQRES 16 A 283 GLY VAL LEU CYS TYR GLU PHE LEU VAL GLY LYS PRO PRO SEQRES 17 A 283 PHE GLU ALA ASN THR TYR GLN GLU THR TYR LYS ARG ILE SEQRES 18 A 283 SER ARG VAL GLU PHE THR PHE PRO ASP PHE VAL THR GLU SEQRES 19 A 283 GLY ALA ARG ASP LEU ILE SER ARG LEU LEU LYS HIS ASN SEQRES 20 A 283 PRO SER GLN ARG PRO MET LEU ARG GLU VAL LEU GLU HIS SEQRES 21 A 283 PRO TRP ILE THR ALA ASN SER SER LYS PRO SER ASN ALA SEQRES 22 A 283 GLN ASN LYS GLU SER ALA SER LYS GLN SER SEQRES 1 D 38 SER SER TYR SER TYR ASP ALA PRO SER ASP PHE ILE ASN SEQRES 2 D 38 PHE SER SER LEU ASP ASP GLU GLY ASP THR GLN ASN ILE SEQRES 3 D 38 ASP SER TRP PHE GLU MK8 LYS ALA ASN MK8 GLU ASN MODRES 5LXM TPO A 288 THR MODIFIED RESIDUE MODRES 5LXM MK8 D 37 GLU MODIFIED RESIDUE MODRES 5LXM MK8 D 41 LEU MODIFIED RESIDUE HET TPO A 288 11 HET MK8 D 37 9 HET MK8 D 41 9 HET ADP A 501 27 HET PG4 A 502 13 HET SO4 A 503 5 HET PEG A 504 7 HET PEG A 505 7 HET MES A 506 12 HET P4G A 507 11 HET CL A 508 1 HET MG A 509 1 HET MG A 510 1 HET NH3 D 101 1 HETNAM TPO PHOSPHOTHREONINE HETNAM MK8 2-METHYL-L-NORLEUCINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM P4G 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM NH3 AMMONIA HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 MK8 2(C7 H15 N O2) FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 PG4 C8 H18 O5 FORMUL 5 SO4 O4 S 2- FORMUL 6 PEG 2(C4 H10 O3) FORMUL 8 MES C6 H13 N O4 S FORMUL 9 P4G C8 H18 O3 FORMUL 10 CL CL 1- FORMUL 11 MG 2(MG 2+) FORMUL 13 NH3 H3 N FORMUL 14 HOH *77(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 GLY A 173 1 8 HELIX 3 AA3 VAL A 174 HIS A 187 1 14 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 LYS A 250 1 22 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 THR A 292 LEU A 296 5 5 HELIX 8 AA8 PRO A 297 GLU A 302 1 6 HELIX 9 AA9 LYS A 309 GLY A 325 1 17 HELIX 10 AB1 THR A 333 VAL A 344 1 12 HELIX 11 AB2 THR A 353 LEU A 364 1 12 HELIX 12 AB3 ASN A 367 ARG A 371 5 5 HELIX 13 AB4 MET A 373 GLU A 379 1 7 HELIX 14 AB5 HIS A 380 ALA A 385 1 6 HELIX 15 AB6 GLN D 29 ILE D 31 5 3 HELIX 16 AB7 ASP D 32 GLU D 42 1 11 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O VAL A 147 N LEU A 139 SHEET 3 AA1 5 PHE A 157 PHE A 165 -1 O LEU A 159 N ALA A 150 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O VAL A 206 N LEU A 164 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N PHE A 200 O TYR A 207 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 LINK C THR A 287 N TPO A 288 1555 1555 1.33 LINK C TPO A 288 N LEU A 289 1555 1555 1.33 LINK C GLU D 36 N MK8 D 37 1555 1555 1.33 LINK C MK8 D 37 N LYS D 38 1555 1555 1.33 LINK CE MK8 D 37 CE MK8 D 41 1555 1555 1.33 LINK C ASN D 40 N MK8 D 41 1555 1555 1.33 LINK C MK8 D 41 N GLU D 42 1555 1555 1.33 LINK C ASN D 43 N NH3 D 101 1555 1555 1.33 LINK OD1 ASN A 261 MG MG A 509 1555 1555 2.67 LINK OD2 ASP A 274 MG MG A 509 1555 1555 2.39 LINK OD1 ASP A 274 MG MG A 510 1555 1555 2.45 LINK O3B ADP A 501 MG MG A 509 1555 1555 2.25 LINK O2A ADP A 501 MG MG A 509 1555 1555 2.00 LINK O1B ADP A 501 MG MG A 510 1555 1555 2.30 LINK O4 PEG A 505 MG MG A 510 1555 1555 2.94 LINK MG MG A 509 O HOH A 651 1555 1555 2.05 LINK MG MG A 509 O HOH A 654 1555 1555 2.23 LINK MG MG A 510 O HOH A 631 1555 1555 2.48 SITE 1 AC1 22 LEU A 139 GLY A 140 GLY A 142 LYS A 143 SITE 2 AC1 22 VAL A 147 ALA A 160 LYS A 162 LEU A 194 SITE 3 AC1 22 GLU A 211 ALA A 213 THR A 217 GLU A 260 SITE 4 AC1 22 ASN A 261 LEU A 263 ASP A 274 PEG A 505 SITE 5 AC1 22 MG A 509 MG A 510 HOH A 643 HOH A 651 SITE 6 AC1 22 HOH A 652 HOH A 654 SITE 1 AC2 3 GLU A 221 LYS A 224 GLU A 302 SITE 1 AC3 5 ARG A 220 LYS A 224 ARG A 304 HIS A 366 SITE 2 AC3 5 ASN A 367 SITE 1 AC4 6 SER A 245 HIS A 248 GLU A 308 MET A 373 SITE 2 AC4 6 LEU A 374 ARG A 375 SITE 1 AC5 6 PHE A 144 GLU A 181 GLY A 276 TRP A 277 SITE 2 AC5 6 ADP A 501 MG A 510 SITE 1 AC6 10 ARG A 180 HIS A 280 PRO A 282 ARG A 286 SITE 2 AC6 10 MET A 305 HOH A 612 HOH A 626 LYS D 38 SITE 3 AC6 10 ALA D 39 GLU D 42 SITE 1 AC7 3 LEU A 289 GLY A 291 TYR A 338 SITE 1 AC8 5 ASN A 261 ASP A 274 ADP A 501 HOH A 651 SITE 2 AC8 5 HOH A 654 SITE 1 AC9 5 ASP A 274 GLY A 276 ADP A 501 PEG A 505 SITE 2 AC9 5 HOH A 631 SITE 1 AD1 4 SER A 283 ALA D 39 GLU D 42 ASN D 43 CRYST1 79.780 79.780 140.260 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012534 0.007237 0.000000 0.00000 SCALE2 0.000000 0.014474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007130 0.00000