PDB Short entry for 5M37 HEADER HYDROLASE 14-OCT-16 5M37 TITLE THE MOLECULAR TWEEZER CLR01 STABILIZES A DISORDERED PROTEIN-PROTEIN TITLE 2 INTERFACE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN ZETA/DELTA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN KINASE C INHIBITOR PROTEIN 1,KCIP-1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: M-PHASE INDUCER PHOSPHATASE 3; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: UNP RESIDUES 207-226; COMPND 10 SYNONYM: DUAL SPECIFICITY PHOSPHATASE CDC25C; COMPND 11 EC: 3.1.3.48; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YWHAZ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS STABILIZATION, 14-3-3, DISORDERED PPI INTERFACE, CDC25C, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.BIER,C.OTTMANN REVDAT 5 17-JAN-24 5M37 1 REMARK REVDAT 4 10-JAN-24 5M37 1 COMPND HETNAM REVDAT 3 12-DEC-18 5M37 1 LINK REVDAT 2 22-NOV-17 5M37 1 JRNL REVDAT 1 15-NOV-17 5M37 0 JRNL AUTH D.BIER,S.MITTAL,K.BRAVO-RODRIGUEZ,A.SOWISLOK,X.GUILLORY, JRNL AUTH 2 J.BRIELS,C.HEID,M.BARTEL,B.WETTIG,L.BRUNSVELD, JRNL AUTH 3 E.SANCHEZ-GARCIA,T.SCHRADER,C.OTTMANN JRNL TITL THE MOLECULAR TWEEZER CLR01 STABILIZES A DISORDERED JRNL TITL 2 PROTEIN-PROTEIN INTERFACE. JRNL REF J. AM. CHEM. SOC. V. 139 16256 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 29039919 JRNL DOI 10.1021/JACS.7B07939 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 28587 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1505 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2065 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.3730 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3820 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 226 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.19000 REMARK 3 B22 (A**2) : 10.17000 REMARK 3 B33 (A**2) : -3.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.319 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.253 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.273 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.933 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4156 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3664 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5696 ; 1.399 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8498 ; 1.229 ; 3.010 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 488 ; 4.916 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;35.004 ;24.780 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 693 ;15.303 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;15.690 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 627 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4550 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 821 ; 0.014 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5M37 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200001854. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30145 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 49.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 12.77 REMARK 200 R MERGE FOR SHELL (I) : 0.80700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.610 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0, PHASER REMARK 200 STARTING MODEL: 3NKX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M AMMONIUM ACETATE;0.085 M TRI REMARK 280 -SODIUM CITRATE PH 5.6; 25.5 %(W/V) PEG 4000; 15 %(V/V) GLYCEROL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.58500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.29500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.10500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.29500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.58500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.10500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 GLY B 71 REMARK 465 ALA B 72 REMARK 465 ARG C 225 REMARK 465 LEU C 226 REMARK 465 PRO D 224 REMARK 465 ARG D 225 REMARK 465 LEU D 226 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CB CG SD CE REMARK 470 LYS A 3 CG CD CE NZ REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 LYS A 68 CD CE NZ REMARK 470 GLN A 77 CD OE1 NE2 REMARK 470 ASP A 136 CG OD1 OD2 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 LYS A 157 CE NZ REMARK 470 LYS A 158 CD CE NZ REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 470 LYS A 212 CG CD CE NZ REMARK 470 SER A 230 C O REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 GLU B 70 CG CD OE1 OE2 REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 GLU B 102 CG CD OE1 OE2 REMARK 470 LYS B 103 CE NZ REMARK 470 GLN B 111 CG CD OE1 NE2 REMARK 470 LYS B 115 CE NZ REMARK 470 LYS B 120 NZ REMARK 470 ASP B 136 CG OD1 OD2 REMARK 470 ASP B 137 CG OD1 OD2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 GLN B 147 CG CD OE1 NE2 REMARK 470 LYS B 157 CD CE NZ REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 GLU B 208 CG CD OE1 OE2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 TYR B 211 CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 212 CG CD CE NZ REMARK 470 SER B 230 O CB OG REMARK 470 SER C 207 N CA CB OG REMARK 470 LEU C 211 CG CD1 CD2 REMARK 470 ARG C 223 CG CD NE CZ NH1 NH2 REMARK 470 SER D 207 OG REMARK 470 ASN D 222 CG OD1 ND2 REMARK 470 ARG D 223 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 69 34.95 -89.56 REMARK 500 ALA A 72 73.84 -111.90 REMARK 500 PHE A 104 -55.53 -133.52 REMARK 500 ALA A 109 95.09 -69.87 REMARK 500 LYS B 68 44.51 -95.94 REMARK 500 PHE B 104 -55.84 -128.23 REMARK 500 SER B 210 27.04 -149.92 REMARK 500 LEU D 221 54.52 71.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 485 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH A 486 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH B 450 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH C 412 DISTANCE = 6.75 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9SZ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9SZ B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9SZ C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9SZ D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues BEZ A 302 and BEZ B REMARK 800 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EXA RELATED DB: PDB REMARK 900 RELATED ID: 5D3F RELATED DB: PDB REMARK 900 RELATED ID: 5EWZ RELATED DB: PDB DBREF 5M37 A 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 5M37 B 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 5M37 C 207 226 UNP P30307 MPIP3_HUMAN 207 226 DBREF 5M37 D 207 226 UNP P30307 MPIP3_HUMAN 207 226 SEQRES 1 A 230 MET ASP LYS ASN GLU LEU VAL GLN LYS ALA LYS LEU ALA SEQRES 2 A 230 GLU GLN ALA GLU ARG TYR ASP ASP MET ALA ALA CYS MET SEQRES 3 A 230 LYS SER VAL THR GLU GLN GLY ALA GLU LEU SER ASN GLU SEQRES 4 A 230 GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL VAL SEQRES 5 A 230 GLY ALA ARG ARG SER SER TRP ARG VAL VAL SER SER ILE SEQRES 6 A 230 GLU GLN LYS THR GLU GLY ALA GLU LYS LYS GLN GLN MET SEQRES 7 A 230 ALA ARG GLU TYR ARG GLU LYS ILE GLU THR GLU LEU ARG SEQRES 8 A 230 ASP ILE CYS ASN ASP VAL LEU SER LEU LEU GLU LYS PHE SEQRES 9 A 230 LEU ILE PRO ASN ALA SER GLN ALA GLU SER LYS VAL PHE SEQRES 10 A 230 TYR LEU LYS MET LYS GLY ASP TYR TYR ARG TYR LEU ALA SEQRES 11 A 230 GLU VAL ALA ALA GLY ASP ASP LYS LYS GLY ILE VAL ASP SEQRES 12 A 230 GLN SER GLN GLN ALA TYR GLN GLU ALA PHE GLU ILE SER SEQRES 13 A 230 LYS LYS GLU MET GLN PRO THR HIS PRO ILE ARG LEU GLY SEQRES 14 A 230 LEU ALA LEU ASN PHE SER VAL PHE TYR TYR GLU ILE LEU SEQRES 15 A 230 ASN SER PRO GLU LYS ALA CYS SER LEU ALA LYS THR ALA SEQRES 16 A 230 PHE ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SER GLU SEQRES 17 A 230 GLU SER TYR LYS ASP SER THR LEU ILE MET GLN LEU LEU SEQRES 18 A 230 ARG ASP ASN LEU THR LEU TRP THR SER SEQRES 1 B 230 MET ASP LYS ASN GLU LEU VAL GLN LYS ALA LYS LEU ALA SEQRES 2 B 230 GLU GLN ALA GLU ARG TYR ASP ASP MET ALA ALA CYS MET SEQRES 3 B 230 LYS SER VAL THR GLU GLN GLY ALA GLU LEU SER ASN GLU SEQRES 4 B 230 GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL VAL SEQRES 5 B 230 GLY ALA ARG ARG SER SER TRP ARG VAL VAL SER SER ILE SEQRES 6 B 230 GLU GLN LYS THR GLU GLY ALA GLU LYS LYS GLN GLN MET SEQRES 7 B 230 ALA ARG GLU TYR ARG GLU LYS ILE GLU THR GLU LEU ARG SEQRES 8 B 230 ASP ILE CYS ASN ASP VAL LEU SER LEU LEU GLU LYS PHE SEQRES 9 B 230 LEU ILE PRO ASN ALA SER GLN ALA GLU SER LYS VAL PHE SEQRES 10 B 230 TYR LEU LYS MET LYS GLY ASP TYR TYR ARG TYR LEU ALA SEQRES 11 B 230 GLU VAL ALA ALA GLY ASP ASP LYS LYS GLY ILE VAL ASP SEQRES 12 B 230 GLN SER GLN GLN ALA TYR GLN GLU ALA PHE GLU ILE SER SEQRES 13 B 230 LYS LYS GLU MET GLN PRO THR HIS PRO ILE ARG LEU GLY SEQRES 14 B 230 LEU ALA LEU ASN PHE SER VAL PHE TYR TYR GLU ILE LEU SEQRES 15 B 230 ASN SER PRO GLU LYS ALA CYS SER LEU ALA LYS THR ALA SEQRES 16 B 230 PHE ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SER GLU SEQRES 17 B 230 GLU SER TYR LYS ASP SER THR LEU ILE MET GLN LEU LEU SEQRES 18 B 230 ARG ASP ASN LEU THR LEU TRP THR SER SEQRES 1 C 20 SER ARG SER GLY LEU TYR ARG SER PRO SEP MET PRO GLU SEQRES 2 C 20 ASN LEU ASN ARG PRO ARG LEU SEQRES 1 D 20 SER ARG SER GLY LEU TYR ARG SER PRO SEP MET PRO GLU SEQRES 2 D 20 ASN LEU ASN ARG PRO ARG LEU MODRES 5M37 SEP C 216 SER MODIFIED RESIDUE MODRES 5M37 SEP D 216 SER MODIFIED RESIDUE HET SEP C 216 10 HET SEP D 216 10 HET 9SZ A 301 52 HET BEZ A 302 9 HET 9SZ B 301 52 HET BEZ B 302 9 HET 9SZ C 301 52 HET 9SZ D 301 52 HETNAM SEP PHOSPHOSERINE HETNAM 9SZ (1R,5S,9S,16R,20R,24S,28S,35R)-3,22- HETNAM 2 9SZ BIS(DIHYDROXYPHOSPHORYLOXY)TRIDECACYCLO[22.14.1.15, HETNAM 3 9SZ 20.19,16.128,35.02,23.04,21.06,19.08,17.010,15.025, HETNAM 4 9SZ 38.027,36.029,34]DOTETRACONTA-2(23),3,6,8(17),10,12, HETNAM 5 9SZ 14,18,21,25,27(36),29,31,33,37-PENTADECAENE HETNAM BEZ BENZOIC ACID HETSYN SEP PHOSPHONOSERINE FORMUL 3 SEP 2(C3 H8 N O6 P) FORMUL 5 9SZ 4(C42 H32 O8 P2) FORMUL 6 BEZ 2(C7 H6 O2) FORMUL 11 HOH *162(H2 O) HELIX 1 AA1 ASP A 2 ALA A 16 1 15 HELIX 2 AA2 ARG A 18 GLN A 32 1 15 HELIX 3 AA3 SER A 37 THR A 69 1 33 HELIX 4 AA4 ALA A 72 PHE A 104 1 33 HELIX 5 AA5 GLN A 111 VAL A 132 1 22 HELIX 6 AA6 GLY A 135 MET A 160 1 26 HELIX 7 AA7 HIS A 164 ILE A 181 1 18 HELIX 8 AA8 SER A 184 GLU A 202 1 19 HELIX 9 AA9 LEU A 203 LEU A 206 5 4 HELIX 10 AB1 SER A 210 SER A 230 1 21 HELIX 11 AB2 LYS B 3 ALA B 16 1 14 HELIX 12 AB3 ARG B 18 GLN B 32 1 15 HELIX 13 AB4 SER B 37 LYS B 68 1 32 HELIX 14 AB5 LYS B 74 PHE B 104 1 31 HELIX 15 AB6 GLN B 111 VAL B 132 1 22 HELIX 16 AB7 ALA B 134 MET B 160 1 27 HELIX 17 AB8 HIS B 164 ILE B 181 1 18 HELIX 18 AB9 SER B 184 GLU B 202 1 19 HELIX 19 AC1 LEU B 203 LEU B 206 5 4 HELIX 20 AC2 SER B 210 THR B 229 1 20 LINK C PRO C 215 N SEP C 216 1555 1555 1.33 LINK C SEP C 216 N MET C 217 1555 1555 1.34 LINK C PRO D 215 N SEP D 216 1555 1555 1.33 LINK C SEP D 216 N MET D 217 1555 1555 1.33 SITE 1 AC1 8 ASN A 183 PRO A 185 GLN B 150 PHE B 153 SITE 2 AC1 8 TYR B 178 SER B 190 HOH B 424 9SZ D 301 SITE 1 AC2 4 LYS B 74 GLN B 77 GLN B 161 THR B 205 SITE 1 AC3 9 TRP B 59 SER B 63 GLN B 67 TYR B 179 SITE 2 AC3 9 GLU B 180 ASN B 183 ARG C 208 SER C 209 SITE 3 AC3 9 TYR C 212 SITE 1 AC4 10 TRP A 59 ARG A 60 SER A 63 GLN A 67 SITE 2 AC4 10 TYR A 179 GLU A 180 9SZ A 301 ARG D 208 SITE 3 AC4 10 SER D 209 HOH D 401 SITE 1 AC5 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AC6 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AC7 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AC8 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AC9 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD1 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD2 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD3 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD4 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD5 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD6 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD7 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD8 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AD9 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AE1 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AE2 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AE3 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 SITE 1 AE4 4 PHE A 196 ARG A 222 GLN B 219 ARG B 222 CRYST1 71.170 88.210 112.590 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014051 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008882 0.00000