PDB Short entry for 5M9N
HEADER    STRUCTURAL PROTEIN                      01-NOV-16   5M9N              
TITLE     CRYSTAL STRUCTURE OF HUMAN TDRD1 EXTENDED TUDOR DOMAIN IN COMPLEX WITH
TITLE    2 A SYMMETRICALLY DIMETHYLATED E2F PEPTIDE                             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TUDOR DOMAIN-CONTAINING PROTEIN 1;                         
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: CANCER/TESTIS ANTIGEN 41.1,CT41.1;                          
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: E2F PEPTIDE;                                               
COMPND   8 CHAIN: C;                                                            
COMPND   9 ENGINEERED: YES;                                                     
COMPND  10 OTHER_DETAILS: 2MR: DIMETHYLATED ARGININE                            
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: TDRD1;                                                         
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 MOL_ID: 2;                                                           
SOURCE  10 SYNTHETIC: YES;                                                      
SOURCE  11 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  12 ORGANISM_TAXID: 9606                                                 
KEYWDS    RNA-MEDIATED GENE SILENCING, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS 
KEYWDS   2 CONSORTIUM, SGC, STRUCTURAL PROTEIN                                  
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    C.TALLANT,P.SAVITSKY,J.MOEHLENBRINK,C.CHAN,G.NUNEZ-ALONSO,J.A.NEWMAN, 
AUTHOR   2 F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,O.FEDOROV,N.B.LA    
AUTHOR   3 THANGUE,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC)                 
REVDAT   2   17-JAN-24 5M9N    1       REMARK                                   
REVDAT   1   16-NOV-16 5M9N    0                                                
JRNL        AUTH   C.TALLANT,P.SAVITSKY,J.MOEHLENBRINK,C.CHAN,G.NUNEZ-ALONSO,   
JRNL        AUTH 2 J.A.NEWMAN,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA, 
JRNL        AUTH 3 O.FEDOROV,N.B.LA THANGUE,S.KNAPP                             
JRNL        TITL   CRYSTAL STRUCTURE OF HUMAN TDRD1 EXTENDED TUDOR DOMAIN IN    
JRNL        TITL 2 COMPLEX WITH A SYMMETRICALLY DIMETHYLATED E2F PEPTIDE        
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.95 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.8.0107                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 29.34                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 96.9                           
REMARK   3   NUMBER OF REFLECTIONS             : 29186                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.215                           
REMARK   3   R VALUE            (WORKING SET) : 0.212                           
REMARK   3   FREE R VALUE                     : 0.260                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.200                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1600                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.95                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.00                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 2004                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 91.29                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2930                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 113                          
REMARK   3   BIN FREE R VALUE                    : 0.3400                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3132                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 25                                      
REMARK   3   SOLVENT ATOMS            : 79                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 33.71                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 44.44                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.57000                                             
REMARK   3    B22 (A**2) : -3.11000                                             
REMARK   3    B33 (A**2) : 3.97000                                              
REMARK   3    B12 (A**2) : 1.66000                                              
REMARK   3    B13 (A**2) : 0.06000                                              
REMARK   3    B23 (A**2) : 0.17000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.190         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.174         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.181         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.633        
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.956                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.935                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  3226 ; 0.016 ; 0.019       
REMARK   3   BOND LENGTHS OTHERS               (A):  3199 ; 0.002 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  4366 ; 1.849 ; 1.998       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  7402 ; 0.969 ; 3.000       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   404 ; 7.763 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   125 ;36.716 ;25.920       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   574 ;14.718 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):     8 ;12.824 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   514 ; 0.101 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  3546 ; 0.008 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):   643 ; 0.002 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1619 ; 1.427 ; 2.274       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  1618 ; 1.424 ; 2.271       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  2016 ; 2.406 ; 3.384       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  2017 ; 2.407 ; 3.388       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1607 ; 1.409 ; 2.419       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  1607 ; 1.409 ; 2.419       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  2349 ; 2.325 ; 3.551       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  3431 ; 6.133 ;17.865       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  3412 ; 6.127 ;17.761       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 2                                          
REMARK   3                                                                      
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   474        A   675                          
REMARK   3    ORIGIN FOR THE GROUP (A):  38.0802  41.8534   5.5552              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2042 T22:   0.3303                                     
REMARK   3      T33:   0.0628 T12:  -0.0651                                     
REMARK   3      T13:  -0.0556 T23:   0.0200                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.0689 L22:   1.1965                                     
REMARK   3      L33:   0.7740 L12:   0.4761                                     
REMARK   3      L13:   0.6276 L23:  -0.3491                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0448 S12:   0.0268 S13:   0.1010                       
REMARK   3      S21:  -0.0275 S22:  -0.0420 S23:   0.1113                       
REMARK   3      S31:   0.0799 S32:   0.0544 S33:  -0.0028                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   B   473        B   672                          
REMARK   3    ORIGIN FOR THE GROUP (A):  46.4791  26.8437  27.3675              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2308 T22:   0.3871                                     
REMARK   3      T33:   0.0481 T12:  -0.0859                                     
REMARK   3      T13:  -0.0873 T23:   0.0900                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.0503 L22:   1.5141                                     
REMARK   3      L33:   1.6444 L12:   0.2312                                     
REMARK   3      L13:  -0.0078 L23:  -0.0648                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0474 S12:  -0.0642 S13:  -0.0362                       
REMARK   3      S21:   0.0338 S22:   0.0110 S23:  -0.0817                       
REMARK   3      S31:  -0.0717 S32:  -0.1439 S33:  -0.0584                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 5M9N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-NOV-16.                  
REMARK 100 THE DEPOSITION ID IS D_1200002130.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 04-OCT-14                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.5-8.5                            
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : DIAMOND                            
REMARK 200  BEAMLINE                       : I04                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0282                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : AIMLESS                            
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 30788                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.950                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 29.340                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 96.9                               
REMARK 200  DATA REDUNDANCY                : 3.500                              
REMARK 200  R MERGE                    (I) : 0.03400                            
REMARK 200  R SYM                      (I) : 0.02500                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 16.7000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.99                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 89.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.41100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.300                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 4B9X                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 45.62                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG4000, 0.2M MGCL2, 0.1 M TRIS PH   
REMARK 280  8.5, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1                              
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ASP A   459                                                      
REMARK 465     GLN A   460                                                      
REMARK 465     SER A   461                                                      
REMARK 465     ASP A   462                                                      
REMARK 465     PRO A   463                                                      
REMARK 465     GLU A   464                                                      
REMARK 465     ASP A   465                                                      
REMARK 465     VAL A   466                                                      
REMARK 465     GLY A   467                                                      
REMARK 465     LYS A   468                                                      
REMARK 465     MET A   469                                                      
REMARK 465     THR A   470                                                      
REMARK 465     THR A   471                                                      
REMARK 465     GLU A   472                                                      
REMARK 465     ASN A   473                                                      
REMARK 465     GLN A   676                                                      
REMARK 465     SER A   677                                                      
REMARK 465     MET A   678                                                      
REMARK 465     ASP B   459                                                      
REMARK 465     GLN B   460                                                      
REMARK 465     SER B   461                                                      
REMARK 465     ASP B   462                                                      
REMARK 465     PRO B   463                                                      
REMARK 465     GLU B   464                                                      
REMARK 465     ASP B   465                                                      
REMARK 465     VAL B   466                                                      
REMARK 465     GLY B   467                                                      
REMARK 465     LYS B   468                                                      
REMARK 465     MET B   469                                                      
REMARK 465     THR B   470                                                      
REMARK 465     THR B   471                                                      
REMARK 465     GLU B   472                                                      
REMARK 465     THR B   657                                                      
REMARK 465     PRO B   658                                                      
REMARK 465     VAL B   673                                                      
REMARK 465     GLY B   674                                                      
REMARK 465     GLU B   675                                                      
REMARK 465     GLN B   676                                                      
REMARK 465     SER B   677                                                      
REMARK 465     MET B   678                                                      
REMARK 465     SER C     1                                                      
REMARK 465     SER C     2                                                      
REMARK 465     GLY C     3                                                      
REMARK 465     PRO C     4                                                      
REMARK 465     ALA C     5                                                      
REMARK 465     ARG C     6                                                      
REMARK 465     HIS C    11                                                      
REMARK 465     PRO C    12                                                      
REMARK 465     GLY C    13                                                      
REMARK 465     LYS C    14                                                      
REMARK 465     GLY C    15                                                      
REMARK 465     VAL C    16                                                      
REMARK 465     LYS C    17                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    CYS A 590   CA    CYS A 590   CB      0.147                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A 588   NE  -  CZ  -  NH1 ANGL. DEV. =   5.5 DEGREES          
REMARK 500    ARG A 588   NE  -  CZ  -  NH2 ANGL. DEV. =  -5.6 DEGREES          
REMARK 500    CYS A 590   CA  -  CB  -  SG  ANGL. DEV. =  18.9 DEGREES          
REMARK 500    CYS B 590   CA  -  CB  -  SG  ANGL. DEV. =  10.0 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A 482       47.87   -107.03                                   
REMARK 500    SER A 537      167.48     72.21                                   
REMARK 500    ALA A 564      149.84   -178.56                                   
REMARK 500    TYR A 578      -38.97   -133.76                                   
REMARK 500    ASN A 632       38.70     39.50                                   
REMARK 500    ASP B 507       90.51   -161.21                                   
REMARK 500    TYR B 578      -54.53   -131.21                                   
REMARK 500    ASN B 645       -0.06     71.45                                   
REMARK 500    2MR C   8     -168.27     50.44                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 ARG A  536     SER A  537                  137.68                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 610                                                                      
REMARK 610 MISSING HETEROATOM                                                   
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 610 I=INSERTION CODE):                                                   
REMARK 610   M RES C SSEQI                                                      
REMARK 610     2MR B  701                                                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 701                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 702                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue 2MR B 701                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 702                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY C 7 and 2MR C 8    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 2MR C 8 and GLY C 9    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY C 9 and 2MR C 10   
DBREF  5M9N A  459   678  UNP    Q9BXT4   TDRD1_HUMAN    460    679             
DBREF  5M9N B  459   678  UNP    Q9BXT4   TDRD1_HUMAN    460    679             
DBREF  5M9N C    1    17  PDB    5M9N     5M9N             1     17             
SEQRES   1 A  220  ASP GLN SER ASP PRO GLU ASP VAL GLY LYS MET THR THR          
SEQRES   2 A  220  GLU ASN ASN ILE VAL VAL ASP LYS SER ASP LEU ILE PRO          
SEQRES   3 A  220  LYS VAL LEU THR LEU ASN VAL GLY ASP GLU PHE CYS GLY          
SEQRES   4 A  220  VAL VAL ALA HIS ILE GLN THR PRO GLU ASP PHE PHE CYS          
SEQRES   5 A  220  GLN GLN LEU GLN SER GLY ARG LYS LEU ALA GLU LEU GLN          
SEQRES   6 A  220  ALA SER LEU SER LYS TYR CYS ASP GLN LEU PRO PRO ARG          
SEQRES   7 A  220  SER ASP PHE TYR PRO ALA ILE GLY ASP ILE CYS CYS ALA          
SEQRES   8 A  220  GLN PHE SER GLU ASP ASP GLN TRP TYR ARG ALA SER VAL          
SEQRES   9 A  220  LEU ALA TYR ALA SER GLU GLU SER VAL LEU VAL GLY TYR          
SEQRES  10 A  220  VAL ASP TYR GLY ASN PHE GLU ILE LEU SER LEU MET ARG          
SEQRES  11 A  220  LEU CYS PRO ILE ILE PRO LYS LEU LEU GLU LEU PRO MET          
SEQRES  12 A  220  GLN ALA ILE LYS CYS VAL LEU ALA GLY VAL LYS PRO SER          
SEQRES  13 A  220  LEU GLY ILE TRP THR PRO GLU ALA ILE CYS LEU MET LYS          
SEQRES  14 A  220  LYS LEU VAL GLN ASN LYS ILE ILE THR VAL LYS VAL VAL          
SEQRES  15 A  220  ASP LYS LEU GLU ASN SER SER LEU VAL GLU LEU ILE ASP          
SEQRES  16 A  220  LYS SER GLU THR PRO HIS VAL SER VAL SER LYS VAL LEU          
SEQRES  17 A  220  LEU ASP ALA GLY PHE ALA VAL GLY GLU GLN SER MET              
SEQRES   1 B  220  ASP GLN SER ASP PRO GLU ASP VAL GLY LYS MET THR THR          
SEQRES   2 B  220  GLU ASN ASN ILE VAL VAL ASP LYS SER ASP LEU ILE PRO          
SEQRES   3 B  220  LYS VAL LEU THR LEU ASN VAL GLY ASP GLU PHE CYS GLY          
SEQRES   4 B  220  VAL VAL ALA HIS ILE GLN THR PRO GLU ASP PHE PHE CYS          
SEQRES   5 B  220  GLN GLN LEU GLN SER GLY ARG LYS LEU ALA GLU LEU GLN          
SEQRES   6 B  220  ALA SER LEU SER LYS TYR CYS ASP GLN LEU PRO PRO ARG          
SEQRES   7 B  220  SER ASP PHE TYR PRO ALA ILE GLY ASP ILE CYS CYS ALA          
SEQRES   8 B  220  GLN PHE SER GLU ASP ASP GLN TRP TYR ARG ALA SER VAL          
SEQRES   9 B  220  LEU ALA TYR ALA SER GLU GLU SER VAL LEU VAL GLY TYR          
SEQRES  10 B  220  VAL ASP TYR GLY ASN PHE GLU ILE LEU SER LEU MET ARG          
SEQRES  11 B  220  LEU CYS PRO ILE ILE PRO LYS LEU LEU GLU LEU PRO MET          
SEQRES  12 B  220  GLN ALA ILE LYS CYS VAL LEU ALA GLY VAL LYS PRO SER          
SEQRES  13 B  220  LEU GLY ILE TRP THR PRO GLU ALA ILE CYS LEU MET LYS          
SEQRES  14 B  220  LYS LEU VAL GLN ASN LYS ILE ILE THR VAL LYS VAL VAL          
SEQRES  15 B  220  ASP LYS LEU GLU ASN SER SER LEU VAL GLU LEU ILE ASP          
SEQRES  16 B  220  LYS SER GLU THR PRO HIS VAL SER VAL SER LYS VAL LEU          
SEQRES  17 B  220  LEU ASP ALA GLY PHE ALA VAL GLY GLU GLN SER MET              
SEQRES   1 C   17  SER SER GLY PRO ALA ARG GLY 2MR GLY 2MR HIS PRO GLY          
SEQRES   2 C   17  LYS GLY VAL LYS                                              
HET    2MR  C   8      13                                                       
HET    2MR  C  10      13                                                       
HET    EDO  A 701       4                                                       
HET    EDO  A 702       4                                                       
HET    2MR  B 701      13                                                       
HET    EDO  B 702       4                                                       
HETNAM     2MR N3, N4-DIMETHYLARGININE                                          
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETSYN     EDO ETHYLENE GLYCOL                                                  
FORMUL   3  2MR    3(C8 H18 N4 O2)                                              
FORMUL   4  EDO    3(C2 H6 O2)                                                  
FORMUL   8  HOH   *79(H2 O)                                                     
HELIX    1 AA1 ASP A  478  LEU A  482  5                                   5    
HELIX    2 AA2 SER A  515  GLN A  532  1                                  18    
HELIX    3 AA3 ILE A  593  GLU A  598  5                                   6    
HELIX    4 AA4 THR A  619  GLN A  631  1                                  13    
HELIX    5 AA5 VAL A  662  ALA A  669  1                                   8    
HELIX    6 AA6 ASP B  478  LEU B  482  5                                   5    
HELIX    7 AA7 GLN B  514  LEU B  533  1                                  20    
HELIX    8 AA8 ILE B  593  GLU B  598  5                                   6    
HELIX    9 AA9 THR B  619  GLN B  631  1                                  13    
HELIX   10 AB1 VAL B  662  ALA B  669  1                                   8    
SHEET    1 AA1 7 VAL A 660  SER A 661  0                                        
SHEET    2 AA1 7 SER A 647  ASP A 653 -1  N  ASP A 653   O  VAL A 660           
SHEET    3 AA1 7 ILE A 635  LYS A 642 -1  N  THR A 636   O  ILE A 652           
SHEET    4 AA1 7 GLU A 494  THR A 504 -1  N  GLY A 497   O  ILE A 635           
SHEET    5 AA1 7 ASP A 507  GLN A 512 -1  O  ASP A 507   N  GLN A 503           
SHEET    6 AA1 7 ILE A 604  LEU A 608 -1  O  ILE A 604   N  CYS A 510           
SHEET    7 AA1 7 SER A 647  ASP A 653  1  O  SER A 647   N  LYS A 605           
SHEET    1 AA2 5 PHE A 581  SER A 585  0                                        
SHEET    2 AA2 5 SER A 570  TYR A 575 -1  N  VAL A 573   O  GLU A 582           
SHEET    3 AA2 5 TRP A 557  SER A 567 -1  N  ALA A 564   O  LEU A 572           
SHEET    4 AA2 5 ILE A 546  GLN A 550 -1  N  CYS A 547   O  ALA A 560           
SHEET    5 AA2 5 LEU A 589  CYS A 590 -1  O  CYS A 590   N  CYS A 548           
SHEET    1 AA3 2 VAL A 611  PRO A 613  0                                        
SHEET    2 AA3 2 ALA A 672  GLY A 674 -1  O  VAL A 673   N  LYS A 612           
SHEET    1 AA4 7 VAL B 660  SER B 661  0                                        
SHEET    2 AA4 7 SER B 647  ASP B 653 -1  N  ASP B 653   O  VAL B 660           
SHEET    3 AA4 7 ILE B 635  LYS B 642 -1  N  THR B 636   O  ILE B 652           
SHEET    4 AA4 7 GLU B 494  THR B 504 -1  N  PHE B 495   O  VAL B 637           
SHEET    5 AA4 7 ASP B 507  GLN B 512 -1  O  PHE B 509   N  ALA B 500           
SHEET    6 AA4 7 ILE B 604  LEU B 608 -1  O  ILE B 604   N  CYS B 510           
SHEET    7 AA4 7 SER B 647  ASP B 653  1  O  VAL B 649   N  VAL B 607           
SHEET    1 AA5 5 PHE B 581  SER B 585  0                                        
SHEET    2 AA5 5 SER B 570  TYR B 575 -1  N  VAL B 571   O  LEU B 584           
SHEET    3 AA5 5 TRP B 557  SER B 567 -1  N  LEU B 563   O  LEU B 572           
SHEET    4 AA5 5 ILE B 546  GLN B 550 -1  N  CYS B 547   O  ALA B 560           
SHEET    5 AA5 5 LEU B 589  CYS B 590 -1  O  CYS B 590   N  CYS B 548           
SSBOND   1 CYS A  530    CYS A  590                          1555   1555  2.23  
SSBOND   2 CYS B  530    CYS B  590                          1555   1555  2.18  
LINK         C   GLY C   7                 N   2MR C   8     1555   1555  1.34  
LINK         C   2MR C   8                 N   GLY C   9     1555   1555  1.34  
LINK         C   GLY C   9                 N   2MR C  10     1555   1555  1.34  
CISPEP   1 ILE B  483    PRO B  484          0        -2.42                     
SITE     1 AC1  5 SER A 537  ASP A 538  PHE A 539  LEU A 586                    
SITE     2 AC1  5 MET A 587                                                     
SITE     1 AC2  1 TYR A 575                                                     
SITE     1 AC3  6 HIS B 501  PHE B 551  TYR B 558  TYR B 575                    
SITE     2 AC3  6 TYR B 578  ASN B 580                                          
SITE     1 AC4  2 GLY B 574  TYR B 575                                          
SITE     1 AC5  7 HIS A 501  PHE A 551  TYR A 558  TYR A 575                    
SITE     2 AC5  7 TYR A 578  ASN A 580  GLY C   9                               
SITE     1 AC6  9 HIS A 501  PHE A 551  ASP A 554  TYR A 558                    
SITE     2 AC6  9 TYR A 575  TYR A 578  ASN A 580  GLY C   7                    
SITE     3 AC6  9 2MR C  10                                                     
SITE     1 AC7  5 GLU A 553  ASP A 554  GLN A 556  TYR A 558                    
SITE     2 AC7  5 2MR C   8                                                     
CRYST1   42.910   52.962   59.619  64.94  88.85  67.67 P 1           2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.023305 -0.009573  0.004298        0.00000                         
SCALE2      0.000000  0.020412 -0.010278        0.00000                         
SCALE3      0.000000  0.000000  0.018783        0.00000