PDB Short entry for 5MJA
HEADER    TRANSFERASE                             30-NOV-16   5MJA              
TITLE     KINASE DOMAIN OF HUMAN EPHB1 BOUND TO A QUINAZOLINE-BASED INHIBITOR   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: EPHRIN TYPE-B RECEPTOR 1;                                  
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: ELK,EPH TYROSINE KINASE 2,EPH-LIKE KINASE 6,HEK6,NEURONALLY-
COMPND   5 EXPRESSED EPH-RELATED TYROSINE KINASE,NET,TYROSINE-PROTEIN KINASE    
COMPND   6 RECEPTOR EPH-2;                                                      
COMPND   7 EC: 2.7.10.1;                                                        
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 OTHER_DETAILS: PHOSPHORYLATION ON TYR647 AND TYR778 AS A RESULT OF   
COMPND  10 AUTOPHOSPHORYLATION DURING RECOMBINANT EXPRESSION IN E.COLI          
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: EPHB1, ELK, EPHT2, HEK6, NET;                                  
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_VARIANT: GOLD                                      
KEYWDS    RECEPTOR TYROSINE KINASE, KINASE DOMAIN, INHIBITOR, TRANSFERASE       
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    A.KUNG,M.SCHIMPL,Y.-C.CHEN,R.C.OVERMAN,C.ZHANG                        
REVDAT   3   24-JAN-18 5MJA    1       SOURCE                                   
REVDAT   2   28-JUN-17 5MJA    1       JRNL                                     
REVDAT   1   17-MAY-17 5MJA    0                                                
JRNL        AUTH   A.KUNG,M.SCHIMPL,A.EKANAYAKE,Y.C.CHEN,R.OVERMAN,C.ZHANG      
JRNL        TITL   A CHEMICAL-GENETIC APPROACH TO GENERATE SELECTIVE COVALENT   
JRNL        TITL 2 INHIBITORS OF PROTEIN KINASES.                               
JRNL        REF    ACS CHEM. BIOL.               V.  12  1499 2017              
JRNL        REFN                   ESSN 1554-8937                               
JRNL        PMID   28459525                                                     
JRNL        DOI    10.1021/ACSCHEMBIO.6B01083                                   
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.14 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : BUSTER 2.11.6                                        
REMARK   3   AUTHORS     : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,              
REMARK   3               : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,              
REMARK   3               : WOMACK,MATTHEWS,TEN EYCK,TRONRUD                     
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 76.89                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 52480                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD           : THROUGHOUT                     
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3   R VALUE     (WORKING + TEST SET)  : 0.202                          
REMARK   3   R VALUE            (WORKING SET)  : 0.200                          
REMARK   3   FREE R VALUE                      : 0.236                          
REMARK   3   FREE R VALUE TEST SET SIZE   (%)  : 4.900                          
REMARK   3   FREE R VALUE TEST SET COUNT       : 2569                           
REMARK   3   ESTIMATED ERROR OF FREE R VALUE   : 0.000                          
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED               : 20                       
REMARK   3   BIN RESOLUTION RANGE HIGH   (ANGSTROMS) : 2.14                     
REMARK   3   BIN RESOLUTION RANGE LOW    (ANGSTROMS) : 2.20                     
REMARK   3   BIN COMPLETENESS (WORKING+TEST)     (%) : 99.15                    
REMARK   3   REFLECTIONS IN BIN (WORKING + TEST SET) : 3807                     
REMARK   3   BIN R VALUE        (WORKING + TEST SET) : 0.2850                   
REMARK   3   REFLECTIONS IN BIN        (WORKING SET) : 3624                     
REMARK   3   BIN R VALUE               (WORKING SET) : 0.2830                   
REMARK   3   BIN FREE R VALUE                        : 0.3190                   
REMARK   3   BIN FREE R VALUE TEST SET SIZE      (%) : 4.81                     
REMARK   3   BIN FREE R VALUE TEST SET COUNT         : 183                      
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE     : 0.000                    
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 4386                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 58                                      
REMARK   3   SOLVENT ATOMS            : 340                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 46.46                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 52.05                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 1.08530                                              
REMARK   3    B22 (A**2) : 1.08530                                              
REMARK   3    B33 (A**2) : -2.17060                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT                    (A) : 0.290               
REMARK   3   DPI (BLOW EQ-10) BASED ON R VALUE        (A) : 0.168               
REMARK   3   DPI (BLOW EQ-9) BASED ON FREE R VALUE    (A) : 0.155               
REMARK   3   DPI (CRUICKSHANK) BASED ON R VALUE       (A) : 0.162               
REMARK   3   DPI (CRUICKSHANK) BASED ON FREE R VALUE  (A) : 0.152               
REMARK   3                                                                      
REMARK   3   REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797                
REMARK   3               CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601     
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.950                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.926                         
REMARK   3                                                                      
REMARK   3   NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15                    
REMARK   3   TERM                          COUNT    WEIGHT   FUNCTION.          
REMARK   3    BOND LENGTHS              : 4537   ; 2.000  ; HARMONIC            
REMARK   3    BOND ANGLES               : 6135   ; 2.000  ; HARMONIC            
REMARK   3    TORSION ANGLES            : 1580   ; 2.000  ; SINUSOIDAL          
REMARK   3    TRIGONAL CARBON PLANES    : 105    ; 2.000  ; HARMONIC            
REMARK   3    GENERAL PLANES            : 651    ; 5.000  ; HARMONIC            
REMARK   3    ISOTROPIC THERMAL FACTORS : 4537   ; 20.000 ; HARMONIC            
REMARK   3    BAD NON-BONDED CONTACTS   : NULL   ; NULL   ; NULL                
REMARK   3    IMPROPER TORSIONS         : NULL   ; NULL   ; NULL                
REMARK   3    PSEUDOROTATION ANGLES     : NULL   ; NULL   ; NULL                
REMARK   3    CHIRAL IMPROPER TORSION   : 569    ; 5.000  ; SEMIHARMONIC        
REMARK   3    SUM OF OCCUPANCIES        : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY DISTANCES         : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY ANGLES            : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY TORSION           : NULL   ; NULL   ; NULL                
REMARK   3    IDEAL-DIST CONTACT TERM   : 5513   ; 4.000  ; SEMIHARMONIC        
REMARK   3                                                                      
REMARK   3   RMS DEVIATIONS FROM IDEAL VALUES.                                  
REMARK   3    BOND LENGTHS                       (A) : 0.010                    
REMARK   3    BOND ANGLES                  (DEGREES) : 1.05                     
REMARK   3    PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.45                     
REMARK   3    OTHER TORSION ANGLES         (DEGREES) : 16.96                    
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 2                                          
REMARK   3                                                                      
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: { A|* }                                                
REMARK   3    ORIGIN FOR THE GROUP (A):   -2.1256   39.7153   -2.9347           
REMARK   3    T TENSOR                                                          
REMARK   3     T11:   -0.1978 T22:   -0.2018                                    
REMARK   3     T33:   -0.0578 T12:    0.0236                                    
REMARK   3     T13:    0.0024 T23:    0.0006                                    
REMARK   3    L TENSOR                                                          
REMARK   3     L11:    1.8498 L22:    1.7837                                    
REMARK   3     L33:    1.9192 L12:    0.2216                                    
REMARK   3     L13:    0.2139 L23:   -0.0687                                    
REMARK   3    S TENSOR                                                          
REMARK   3     S11:   -0.0983 S12:   -0.0787 S13:   -0.1039                     
REMARK   3     S21:    0.1237 S22:    0.1327 S23:   -0.4200                     
REMARK   3     S31:    0.0677 S32:    0.1690 S33:   -0.0344                     
REMARK   3                                                                      
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: { B|* }                                                
REMARK   3    ORIGIN FOR THE GROUP (A):  -33.4040   40.1416   -6.1210           
REMARK   3    T TENSOR                                                          
REMARK   3     T11:   -0.1707 T22:   -0.0930                                    
REMARK   3     T33:   -0.0900 T12:    0.0202                                    
REMARK   3     T13:    0.0487 T23:    0.0895                                    
REMARK   3    L TENSOR                                                          
REMARK   3     L11:    2.1980 L22:    1.2336                                    
REMARK   3     L33:    1.2283 L12:    0.5447                                    
REMARK   3     L13:    0.6060 L23:    0.1665                                    
REMARK   3    S TENSOR                                                          
REMARK   3     S11:   -0.0575 S12:    0.0182 S13:    0.1069                     
REMARK   3     S21:    0.1013 S22:    0.0818 S23:    0.2543                     
REMARK   3     S31:   -0.0640 S32:   -0.1944 S33:   -0.0243                     
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5MJA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-DEC-16.                  
REMARK 100 THE DEPOSITION ID IS D_1200002553.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 18-JUN-16                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : DIAMOND                            
REMARK 200  BEAMLINE                       : I04                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9795                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS3 S 6M              
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DIALS                              
REMARK 200  DATA SCALING SOFTWARE          : AIMLESS                            
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 52668                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.140                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 76.890                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY                : 19.70                              
REMARK 200  R MERGE                    (I) : 0.10800                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 16.2000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.20                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 19.30                              
REMARK 200  R MERGE FOR SHELL          (I) : 2.16400                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.500                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: BUSTER 2.11.6                                         
REMARK 200 STARTING MODEL: 3ZFX CHAIN A                                         
REMARK 200                                                                      
REMARK 200 REMARK: HEXAGONAL PLATES                                             
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 63.71                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 18 % PEG3350, 0.1-0.2 M AMMONIUM         
REMARK 280  SULFATE, 0.1 M PCTP (SODIUM PROPIONATE, SODIUM CACODYLATE           
REMARK 280  TRIHYDRATE, BIS-TRIS PROPANE) BUFFER PH 6-9, VAPOR DIFFUSION,       
REMARK 280  SITTING DROP, TEMPERATURE 293K                                      
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   Y,X,-Z                                                  
REMARK 290       5555   X-Y,-Y,-Z+2/3                                           
REMARK 290       6555   -X,-X+Y,-Z+1/3                                          
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       52.38000            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000      104.76000            
REMARK 290   SMTRY1   4 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   5  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000      104.76000            
REMARK 290   SMTRY1   6 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000       52.38000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   592                                                      
REMARK 465     GLY A   593                                                      
REMARK 465     HIS A   594                                                      
REMARK 465     HIS A   595                                                      
REMARK 465     HIS A   596                                                      
REMARK 465     HIS A   597                                                      
REMARK 465     HIS A   598                                                      
REMARK 465     HIS A   599                                                      
REMARK 465     GLY A   600                                                      
REMARK 465     SER A   601                                                      
REMARK 465     ASP A   602                                                      
REMARK 465     PRO A   603                                                      
REMARK 465     ASN A   604                                                      
REMARK 465     GLU A   605                                                      
REMARK 465     ALA A   606                                                      
REMARK 465     VAL A   607                                                      
REMARK 465     ARG A   608                                                      
REMARK 465     GLN A   770                                                      
REMARK 465     ASP A   771                                                      
REMARK 465     ASP A   772                                                      
REMARK 465     THR A   773                                                      
REMARK 465     SER A   774                                                      
REMARK 465     ASP A   775                                                      
REMARK 465     LEU A   782                                                      
REMARK 465     GLY A   783                                                      
REMARK 465     GLY A   784                                                      
REMARK 465     LYS A   785                                                      
REMARK 465     ILE A   786                                                      
REMARK 465     THR A   893                                                      
REMARK 465     ILE A   894                                                      
REMARK 465     THR A   895                                                      
REMARK 465     ALA A   896                                                      
REMARK 465     MET B   592                                                      
REMARK 465     GLY B   593                                                      
REMARK 465     HIS B   594                                                      
REMARK 465     HIS B   595                                                      
REMARK 465     HIS B   596                                                      
REMARK 465     HIS B   597                                                      
REMARK 465     HIS B   598                                                      
REMARK 465     HIS B   599                                                      
REMARK 465     GLY B   600                                                      
REMARK 465     SER B   601                                                      
REMARK 465     ASP B   602                                                      
REMARK 465     PRO B   603                                                      
REMARK 465     ASN B   604                                                      
REMARK 465     GLU B   605                                                      
REMARK 465     ALA B   606                                                      
REMARK 465     VAL B   607                                                      
REMARK 465     ARG B   608                                                      
REMARK 465     GLN B   770                                                      
REMARK 465     ASP B   771                                                      
REMARK 465     ASP B   772                                                      
REMARK 465     THR B   773                                                      
REMARK 465     SER B   774                                                      
REMARK 465     ASP B   775                                                      
REMARK 465     VAL B   891                                                      
REMARK 465     ALA B   892                                                      
REMARK 465     THR B   893                                                      
REMARK 465     ILE B   894                                                      
REMARK 465     THR B   895                                                      
REMARK 465     ALA B   896                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A 609    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 620    CD   CE   NZ                                        
REMARK 470     LYS A 800    CD   CE   NZ                                        
REMARK 470     GLN A 839    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 889    CG   CD   CE   NZ                                   
REMARK 470     GLU B 609    CG   CD   OE1  OE2                                  
REMARK 470     LYS B 620    CD   CE   NZ                                        
REMARK 470     ARG B 663    NE   CZ   NH1  NH2                                  
REMARK 470     LYS B 889    CG   CD   CE   NZ                                   
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    GLU A 622     -136.07   -112.20                                   
REMARK 500    ASN A 739       39.16     70.51                                   
REMARK 500    ARG A 743       -6.85     72.70                                   
REMARK 500    ASP A 762       73.99     56.55                                   
REMARK 500    TRP A 826     -117.08     51.68                                   
REMARK 500    GLU B 622     -137.04   -112.93                                   
REMARK 500    ASN B 739       39.00     70.53                                   
REMARK 500    ARG B 743       -6.86     73.12                                   
REMARK 500    ASP B 762       72.67     58.22                                   
REMARK 500    TRP B 826     -118.70     52.33                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue 7O3 A 901                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 902                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue 7O3 B 901                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 902                 
DBREF  5MJA A  602   896  UNP    P54762   EPHB1_HUMAN    602    896             
DBREF  5MJA B  602   896  UNP    P54762   EPHB1_HUMAN    602    896             
SEQADV 5MJA MET A  592  UNP  P54762              INITIATING METHIONINE          
SEQADV 5MJA GLY A  593  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS A  594  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS A  595  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS A  596  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS A  597  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS A  598  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS A  599  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA GLY A  600  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA SER A  601  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA ARG A  678  UNP  P54762    PRO   678 CONFLICT                       
SEQADV 5MJA SER A  736  UNP  P54762    ALA   736 CONFLICT                       
SEQADV 5MJA MET B  592  UNP  P54762              INITIATING METHIONINE          
SEQADV 5MJA GLY B  593  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS B  594  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS B  595  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS B  596  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS B  597  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS B  598  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA HIS B  599  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA GLY B  600  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA SER B  601  UNP  P54762              EXPRESSION TAG                 
SEQADV 5MJA ARG B  678  UNP  P54762    PRO   678 CONFLICT                       
SEQADV 5MJA SER B  736  UNP  P54762    ALA   736 CONFLICT                       
SEQRES   1 A  305  MET GLY HIS HIS HIS HIS HIS HIS GLY SER ASP PRO ASN          
SEQRES   2 A  305  GLU ALA VAL ARG GLU PHE ALA LYS GLU ILE ASP VAL SER          
SEQRES   3 A  305  PHE VAL LYS ILE GLU GLU VAL ILE GLY ALA GLY GLU PHE          
SEQRES   4 A  305  GLY GLU VAL TYR LYS GLY ARG LEU LYS LEU PRO GLY LYS          
SEQRES   5 A  305  ARG GLU ILE PTR VAL ALA ILE LYS THR LEU LYS ALA GLY          
SEQRES   6 A  305  TYR SER GLU LYS GLN ARG ARG ASP PHE LEU SER GLU ALA          
SEQRES   7 A  305  SER ILE MET GLY GLN PHE ASP HIS ARG ASN ILE ILE ARG          
SEQRES   8 A  305  LEU GLU GLY VAL VAL THR LYS SER ARG PRO VAL MET ILE          
SEQRES   9 A  305  ILE THR GLU PHE MET GLU ASN GLY ALA LEU ASP SER PHE          
SEQRES  10 A  305  LEU ARG GLN ASN ASP GLY GLN PHE THR VAL ILE GLN LEU          
SEQRES  11 A  305  VAL GLY MET LEU ARG GLY ILE ALA ALA GLY MET LYS TYR          
SEQRES  12 A  305  LEU SER GLU MET ASN TYR VAL HIS ARG ASP LEU ALA ALA          
SEQRES  13 A  305  ARG ASN ILE LEU VAL ASN SER ASN LEU VAL CYS LYS VAL          
SEQRES  14 A  305  SER ASP PHE GLY LEU SER ARG TYR LEU GLN ASP ASP THR          
SEQRES  15 A  305  SER ASP PRO THR PTR THR SER SER LEU GLY GLY LYS ILE          
SEQRES  16 A  305  PRO VAL ARG TRP THR ALA PRO GLU ALA ILE ALA TYR ARG          
SEQRES  17 A  305  LYS PHE THR SER ALA SER ASP VAL TRP SER TYR GLY ILE          
SEQRES  18 A  305  VAL MET TRP GLU VAL MET SER PHE GLY GLU ARG PRO TYR          
SEQRES  19 A  305  TRP ASP MET SER ASN GLN ASP VAL ILE ASN ALA ILE GLU          
SEQRES  20 A  305  GLN ASP TYR ARG LEU PRO PRO PRO MET ASP CYS PRO ALA          
SEQRES  21 A  305  ALA LEU HIS GLN LEU MET LEU ASP CYS TRP GLN LYS ASP          
SEQRES  22 A  305  ARG ASN SER ARG PRO ARG PHE ALA GLU ILE VAL ASN THR          
SEQRES  23 A  305  LEU ASP LYS MET ILE ARG ASN PRO ALA SER LEU LYS THR          
SEQRES  24 A  305  VAL ALA THR ILE THR ALA                                      
SEQRES   1 B  305  MET GLY HIS HIS HIS HIS HIS HIS GLY SER ASP PRO ASN          
SEQRES   2 B  305  GLU ALA VAL ARG GLU PHE ALA LYS GLU ILE ASP VAL SER          
SEQRES   3 B  305  PHE VAL LYS ILE GLU GLU VAL ILE GLY ALA GLY GLU PHE          
SEQRES   4 B  305  GLY GLU VAL TYR LYS GLY ARG LEU LYS LEU PRO GLY LYS          
SEQRES   5 B  305  ARG GLU ILE PTR VAL ALA ILE LYS THR LEU LYS ALA GLY          
SEQRES   6 B  305  TYR SER GLU LYS GLN ARG ARG ASP PHE LEU SER GLU ALA          
SEQRES   7 B  305  SER ILE MET GLY GLN PHE ASP HIS ARG ASN ILE ILE ARG          
SEQRES   8 B  305  LEU GLU GLY VAL VAL THR LYS SER ARG PRO VAL MET ILE          
SEQRES   9 B  305  ILE THR GLU PHE MET GLU ASN GLY ALA LEU ASP SER PHE          
SEQRES  10 B  305  LEU ARG GLN ASN ASP GLY GLN PHE THR VAL ILE GLN LEU          
SEQRES  11 B  305  VAL GLY MET LEU ARG GLY ILE ALA ALA GLY MET LYS TYR          
SEQRES  12 B  305  LEU SER GLU MET ASN TYR VAL HIS ARG ASP LEU ALA ALA          
SEQRES  13 B  305  ARG ASN ILE LEU VAL ASN SER ASN LEU VAL CYS LYS VAL          
SEQRES  14 B  305  SER ASP PHE GLY LEU SER ARG TYR LEU GLN ASP ASP THR          
SEQRES  15 B  305  SER ASP PRO THR PTR THR SER SER LEU GLY GLY LYS ILE          
SEQRES  16 B  305  PRO VAL ARG TRP THR ALA PRO GLU ALA ILE ALA TYR ARG          
SEQRES  17 B  305  LYS PHE THR SER ALA SER ASP VAL TRP SER TYR GLY ILE          
SEQRES  18 B  305  VAL MET TRP GLU VAL MET SER PHE GLY GLU ARG PRO TYR          
SEQRES  19 B  305  TRP ASP MET SER ASN GLN ASP VAL ILE ASN ALA ILE GLU          
SEQRES  20 B  305  GLN ASP TYR ARG LEU PRO PRO PRO MET ASP CYS PRO ALA          
SEQRES  21 B  305  ALA LEU HIS GLN LEU MET LEU ASP CYS TRP GLN LYS ASP          
SEQRES  22 B  305  ARG ASN SER ARG PRO ARG PHE ALA GLU ILE VAL ASN THR          
SEQRES  23 B  305  LEU ASP LYS MET ILE ARG ASN PRO ALA SER LEU LYS THR          
SEQRES  24 B  305  VAL ALA THR ILE THR ALA                                      
MODRES 5MJA PTR A  647  TYR  MODIFIED RESIDUE                                   
MODRES 5MJA PTR A  778  TYR  MODIFIED RESIDUE                                   
MODRES 5MJA PTR B  647  TYR  MODIFIED RESIDUE                                   
MODRES 5MJA PTR B  778  TYR  MODIFIED RESIDUE                                   
HET    PTR  A 647      16                                                       
HET    PTR  A 778      16                                                       
HET    PTR  B 647      16                                                       
HET    PTR  B 778      16                                                       
HET    7O3  A 901      24                                                       
HET    SO4  A 902       5                                                       
HET    7O3  B 901      24                                                       
HET    SO4  B 902       5                                                       
HETNAM     PTR O-PHOSPHOTYROSINE                                                
HETNAM     7O3 2-CHLORANYL-~{N}-[4-[(2-CHLORANYL-5-OXIDANYL-PHENYL)             
HETNAM   2 7O3  AMINO]QUINAZOLIN-7-YL]ETHANAMIDE                                
HETNAM     SO4 SULFATE ION                                                      
HETSYN     PTR PHOSPHONOTYROSINE                                                
FORMUL   1  PTR    4(C9 H12 N O6 P)                                             
FORMUL   3  7O3    2(C16 H12 CL2 N4 O2)                                         
FORMUL   4  SO4    2(O4 S 2-)                                                   
FORMUL   7  HOH   *340(H2 O)                                                    
HELIX    1 AA1 ASP A  615  SER A  617  5                                   3    
HELIX    2 AA2 SER A  658  GLY A  673  1                                  16    
HELIX    3 AA3 ALA A  704  GLN A  711  1                                   8    
HELIX    4 AA4 THR A  717  MET A  738  1                                  22    
HELIX    5 AA5 ALA A  746  ARG A  748  5                                   3    
HELIX    6 AA6 PRO A  787  THR A  791  5                                   5    
HELIX    7 AA7 ALA A  792  ARG A  799  1                                   8    
HELIX    8 AA8 THR A  802  SER A  819  1                                  18    
HELIX    9 AA9 SER A  829  GLN A  839  1                                  11    
HELIX   10 AB1 PRO A  850  TRP A  861  1                                  12    
HELIX   11 AB2 ASP A  864  ARG A  868  5                                   5    
HELIX   12 AB3 ARG A  870  ASN A  884  1                                  15    
HELIX   13 AB4 PRO A  885  LYS A  889  5                                   5    
HELIX   14 AB5 ASP B  615  SER B  617  5                                   3    
HELIX   15 AB6 SER B  658  GLY B  673  1                                  16    
HELIX   16 AB7 LEU B  705  GLN B  711  1                                   7    
HELIX   17 AB8 THR B  717  MET B  738  1                                  22    
HELIX   18 AB9 ALA B  746  ARG B  748  5                                   3    
HELIX   19 AC1 PRO B  787  THR B  791  5                                   5    
HELIX   20 AC2 ALA B  792  ARG B  799  1                                   8    
HELIX   21 AC3 THR B  802  SER B  819  1                                  18    
HELIX   22 AC4 SER B  829  GLN B  839  1                                  11    
HELIX   23 AC5 PRO B  850  TRP B  861  1                                  12    
HELIX   24 AC6 ASP B  864  ARG B  868  5                                   5    
HELIX   25 AC7 ARG B  870  ASN B  884  1                                  15    
HELIX   26 AC8 PRO B  885  LYS B  889  5                                   5    
SHEET    1 AA1 5 VAL A 619  ALA A 627  0                                        
SHEET    2 AA1 5 GLU A 632  LEU A 638 -1  O  VAL A 633   N  ILE A 625           
SHEET    3 AA1 5 ILE A 646  THR A 652 -1  O  ILE A 650   N  TYR A 634           
SHEET    4 AA1 5 MET A 694  GLU A 698 -1  O  ILE A 695   N  LYS A 651           
SHEET    5 AA1 5 LEU A 683  VAL A 687 -1  N  GLU A 684   O  ILE A 696           
SHEET    1 AA2 2 TYR A 740  VAL A 741  0                                        
SHEET    2 AA2 2 ARG A 767  TYR A 768 -1  O  ARG A 767   N  VAL A 741           
SHEET    1 AA3 2 ILE A 750  VAL A 752  0                                        
SHEET    2 AA3 2 CYS A 758  VAL A 760 -1  O  LYS A 759   N  LEU A 751           
SHEET    1 AA4 2 PTR A 778  THR A 779  0                                        
SHEET    2 AA4 2 LYS A 800  PHE A 801 -1  O  PHE A 801   N  PTR A 778           
SHEET    1 AA5 5 VAL B 619  ALA B 627  0                                        
SHEET    2 AA5 5 GLU B 632  LEU B 638 -1  O  VAL B 633   N  ILE B 625           
SHEET    3 AA5 5 ILE B 646  THR B 652 -1  O  ILE B 646   N  LEU B 638           
SHEET    4 AA5 5 MET B 694  GLU B 698 -1  O  ILE B 695   N  LYS B 651           
SHEET    5 AA5 5 LEU B 683  VAL B 687 -1  N  GLU B 684   O  ILE B 696           
SHEET    1 AA6 3 GLY B 703  ALA B 704  0                                        
SHEET    2 AA6 3 ILE B 750  VAL B 752 -1  O  VAL B 752   N  GLY B 703           
SHEET    3 AA6 3 CYS B 758  VAL B 760 -1  O  LYS B 759   N  LEU B 751           
SHEET    1 AA7 2 TYR B 740  VAL B 741  0                                        
SHEET    2 AA7 2 ARG B 767  TYR B 768 -1  O  ARG B 767   N  VAL B 741           
SHEET    1 AA8 2 PTR B 778  THR B 779  0                                        
SHEET    2 AA8 2 LYS B 800  PHE B 801 -1  O  PHE B 801   N  PTR B 778           
LINK         C   ILE A 646                 N   PTR A 647     1555   1555  1.33  
LINK         C   PTR A 647                 N   VAL A 648     1555   1555  1.33  
LINK         C   THR A 777                 N   PTR A 778     1555   1555  1.33  
LINK         C   PTR A 778                 N   THR A 779     1555   1555  1.34  
LINK         C   ILE B 646                 N   PTR B 647     1555   1555  1.34  
LINK         C   PTR B 647                 N   VAL B 648     1555   1555  1.34  
LINK         C   THR B 777                 N   PTR B 778     1555   1555  1.33  
LINK         C   PTR B 778                 N   THR B 779     1555   1555  1.33  
CISPEP   1 ARG A  691    PRO A  692          0        -5.26                     
CISPEP   2 ARG B  691    PRO B  692          0         9.22                     
SITE     1 AC1 12 VAL A 633  ALA A 649  LYS A 651  GLU A 668                    
SITE     2 AC1 12 THR A 697  GLU A 698  MET A 700  GLY A 703                    
SITE     3 AC1 12 LEU A 751  SER A 761  ASP A 762  HOH A1044                    
SITE     1 AC2  4 ASP A 879  ARG A 883  HOH A1030  LYS B 643                    
SITE     1 AC3 13 ALA B 649  LYS B 651  GLU B 668  THR B 697                    
SITE     2 AC3 13 GLU B 698  MET B 700  GLU B 701  GLY B 703                    
SITE     3 AC3 13 LEU B 751  SER B 761  ASP B 762  HOH B1091                    
SITE     4 AC3 13 HOH B1136                                                     
SITE     1 AC4  5 ARG A 682  GLU A 698  LYS A 759  ARG B 678                    
SITE     2 AC4  5 HOH B1102                                                     
CRYST1  101.806  101.806  157.140  90.00  90.00 120.00 P 31 2 1     12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.009823  0.005671  0.000000        0.00000                         
SCALE2      0.000000  0.011342  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.006364        0.00000