PDB Short entry for 5MV9 HEADER MOTOR PROTEIN 16-JAN-17 5MV9 TITLE STRUCTURE OF HUMAN MYOSIN 7A C-TERMINAL MYTH4-FERM DOMAIN IN COMPLEX TITLE 2 WITH HARMONIN-A PDZ3 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCONVENTIONAL MYOSIN-VIIA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CDNA FLJ51329, HIGHLY SIMILAR TO HARMONIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MYO7A, USH1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MOTOR PROTEIN, MYOSIN, MYOSIN TAIL, HARMONIN, PDZ EXPDTA X-RAY DIFFRACTION AUTHOR I.YU,Y.SOURIGUES,M.A.TITUS,A.HOUDUSSE REVDAT 3 17-JAN-24 5MV9 1 ATOM REVDAT 2 12-JUL-17 5MV9 1 REVDAT 1 05-JUL-17 5MV9 0 JRNL AUTH I.M.YU,V.J.PLANELLES-HERRERO,Y.SOURIGUES,D.MOUSSAOUI, JRNL AUTH 2 H.SIRKIA,C.KIKUTI,D.STROEBEL,M.A.TITUS,A.HOUDUSSE JRNL TITL MYOSIN 7 AND ITS ADAPTORS LINK CADHERINS TO ACTIN. JRNL REF NAT COMMUN V. 8 15864 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28660889 JRNL DOI 10.1038/NCOMMS15864 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 28017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1400 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.61 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2743 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2650 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2606 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.99 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 137 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 328 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.47380 REMARK 3 B22 (A**2) : 14.34090 REMARK 3 B33 (A**2) : -8.86710 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.300 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.415 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.266 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.383 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.265 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4868 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6620 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1625 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 108 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 703 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4868 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 641 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5650 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.83 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.62 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 104.1660 56.4849 56.3682 REMARK 3 T TENSOR REMARK 3 T11: -0.2072 T22: -0.3319 REMARK 3 T33: -0.4354 T12: -0.0062 REMARK 3 T13: 0.0157 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 2.0475 L22: 1.1104 REMARK 3 L33: 0.3773 L12: -0.2411 REMARK 3 L13: 0.2204 L23: 0.0659 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: -0.0370 S13: -0.1294 REMARK 3 S21: -0.1375 S22: -0.0573 S23: 0.1394 REMARK 3 S31: 0.1384 S32: -0.0676 S33: 0.0039 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 96.4951 22.5068 56.7145 REMARK 3 T TENSOR REMARK 3 T11: -0.2682 T22: -0.2727 REMARK 3 T33: -0.0593 T12: -0.0148 REMARK 3 T13: -0.1631 T23: 0.0578 REMARK 3 L TENSOR REMARK 3 L11: 3.2320 L22: 10.3049 REMARK 3 L33: 3.5748 L12: -0.2128 REMARK 3 L13: 0.5137 L23: -0.8940 REMARK 3 S TENSOR REMARK 3 S11: 0.2913 S12: 0.0126 S13: -0.6215 REMARK 3 S21: -0.0915 S22: -0.2774 S23: -0.9884 REMARK 3 S31: 0.4383 S32: 0.4912 S33: -0.0140 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003063. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978570 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87935 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.53000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5MV8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% (W/V) PEG 4000, 0.1 M MES PH 6.5, REMARK 280 50 MM MGCL2, AND 10% (V/V) ISOPROPANOL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.40000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.40000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 60.76000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.85500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 60.76000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.85500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.40000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 60.76000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.85500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.40000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 60.76000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 75.85500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2656 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1689 REMARK 465 GLY A 1690 REMARK 465 SER A 1691 REMARK 465 SER A 1692 REMARK 465 HIS A 1693 REMARK 465 HIS A 1694 REMARK 465 HIS A 1695 REMARK 465 HIS A 1696 REMARK 465 HIS A 1697 REMARK 465 HIS A 1698 REMARK 465 SER A 1699 REMARK 465 SER A 1700 REMARK 465 GLY A 1701 REMARK 465 THR A 1702 REMARK 465 ALA A 1703 REMARK 465 GLU A 1704 REMARK 465 PRO A 1705 REMARK 465 GLU A 1706 REMARK 465 MET A 1734 REMARK 465 VAL A 1735 REMARK 465 SER A 1736 REMARK 465 LYS A 1737 REMARK 465 ALA A 1738 REMARK 465 ARG A 1739 REMARK 465 GLY A 1740 REMARK 465 LYS A 1741 REMARK 465 PRO A 1978 REMARK 465 ILE A 1979 REMARK 465 LYS A 1980 REMARK 465 ASP A 1981 REMARK 465 GLY A 1982 REMARK 465 ILE A 1983 REMARK 465 VAL A 1984 REMARK 465 PRO A 1985 REMARK 465 LEU A 2174 REMARK 465 VAL A 2175 REMARK 465 ARG A 2176 REMARK 465 GLY A 2177 REMARK 465 LYS A 2207 REMARK 465 GLN A 2208 REMARK 465 ARG A 2209 REMARK 465 GLY A 2210 REMARK 465 SER A 2211 REMARK 465 ARG A 2212 REMARK 465 SER A 2213 REMARK 465 GLY A 2214 REMARK 465 LYS A 2215 REMARK 465 GLY B 423 REMARK 465 ALA B 424 REMARK 465 MET B 425 REMARK 465 GLY B 426 REMARK 465 SER B 427 REMARK 465 GLN B 428 REMARK 465 ASP B 429 REMARK 465 PHE B 430 REMARK 465 ARG B 431 REMARK 465 LYS B 432 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A1707 CG1 CG2 REMARK 470 ARG A1708 NH1 NH2 REMARK 470 LYS A1710 CG CD CE NZ REMARK 470 GLU A1765 CG CD OE1 OE2 REMARK 470 LYS A1787 CG CD CE NZ REMARK 470 ARG A1788 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1790 CG CD NE CZ NH1 NH2 REMARK 470 SER A1791 OG REMARK 470 LYS A1805 CG CD CE NZ REMARK 470 HIS A1825 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A1884 CG CD CE NZ REMARK 470 LYS A1974 CG CD CE NZ REMARK 470 LYS A1975 CG CD CE NZ REMARK 470 ARG A1977 CG CD NE CZ NH1 NH2 REMARK 470 SER A1986 OG REMARK 470 LEU A1987 CG CD1 CD2 REMARK 470 ARG A2031 NH1 NH2 REMARK 470 LYS A2058 CG CD CE NZ REMARK 470 ARG A2061 CD NE CZ NH1 NH2 REMARK 470 ARG A2070 CG CD NE CZ NH1 NH2 REMARK 470 LYS A2078 CE NZ REMARK 470 ARG A2079 CG CD NE CZ NH1 NH2 REMARK 470 LYS A2087 CG CD CE NZ REMARK 470 ASN A2124 CG OD1 ND2 REMARK 470 LYS A2144 CG CD CE NZ REMARK 470 LYS A2146 NZ REMARK 470 ASN A2173 CG OD1 ND2 REMARK 470 LYS A2179 CD CE NZ REMARK 470 GLU B 435 CG CD OE1 OE2 REMARK 470 GLU B 446 CG CD OE1 OE2 REMARK 470 ARG B 457 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 459 CG CD CE NZ REMARK 470 GLU B 486 CG CD OE1 OE2 REMARK 470 ARG B 487 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 492 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 508 CG CD CE NZ REMARK 470 GLN B 523 CG CD OE1 NE2 REMARK 470 LYS B 524 CG CD CE NZ REMARK 470 GLN B 528 CG CD OE1 NE2 REMARK 470 GLU B 544 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1763 95.11 -62.35 REMARK 500 SER A1786 -109.01 -146.71 REMARK 500 LYS A1787 -169.63 -170.52 REMARK 500 ALA A1950 -114.14 47.37 REMARK 500 LEU A1987 49.18 -86.61 REMARK 500 PHE A2013 -60.73 -102.55 REMARK 500 GLU A2047 -126.66 56.49 REMARK 500 HIS A2088 32.42 -89.94 REMARK 500 ALA A2089 -120.66 40.22 REMARK 500 MET A2205 52.19 -90.57 REMARK 500 LYS B 460 73.69 76.57 REMARK 500 ALA B 489 -65.83 77.09 REMARK 500 GLU B 548 -63.94 -124.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2688 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH A2689 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A2690 DISTANCE = 9.17 ANGSTROMS REMARK 525 HOH A2691 DISTANCE = 10.67 ANGSTROMS REMARK 525 HOH B 636 DISTANCE = 9.65 ANGSTROMS REMARK 525 HOH B 637 DISTANCE = 14.86 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 2301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 2302 DBREF 5MV9 A 1702 2215 UNP Q13402 MYO7A_HUMAN 1702 2215 DBREF 5MV9 B 428 552 UNP B4DV53 B4DV53_HUMAN 360 484 SEQADV 5MV9 MET A 1689 UNP Q13402 INITIATING METHIONINE SEQADV 5MV9 GLY A 1690 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 SER A 1691 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 SER A 1692 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 HIS A 1693 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 HIS A 1694 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 HIS A 1695 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 HIS A 1696 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 HIS A 1697 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 HIS A 1698 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 SER A 1699 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 SER A 1700 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 GLY A 1701 UNP Q13402 EXPRESSION TAG SEQADV 5MV9 GLY B 423 UNP B4DV53 EXPRESSION TAG SEQADV 5MV9 ALA B 424 UNP B4DV53 EXPRESSION TAG SEQADV 5MV9 MET B 425 UNP B4DV53 EXPRESSION TAG SEQADV 5MV9 GLY B 426 UNP B4DV53 EXPRESSION TAG SEQADV 5MV9 SER B 427 UNP B4DV53 EXPRESSION TAG SEQRES 1 A 527 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 527 THR ALA GLU PRO GLU VAL ARG ALA LYS PRO TYR THR LEU SEQRES 3 A 527 GLU GLU PHE SER TYR ASP TYR PHE ARG PRO PRO PRO LYS SEQRES 4 A 527 HIS THR LEU SER ARG VAL MET VAL SER LYS ALA ARG GLY SEQRES 5 A 527 LYS ASP ARG LEU TRP SER HIS THR ARG GLU PRO LEU LYS SEQRES 6 A 527 GLN ALA LEU LEU LYS LYS LEU LEU GLY SER GLU GLU LEU SEQRES 7 A 527 SER GLN GLU ALA CYS LEU ALA PHE ILE ALA VAL LEU LYS SEQRES 8 A 527 TYR MET GLY ASP TYR PRO SER LYS ARG THR ARG SER VAL SEQRES 9 A 527 ASN GLU LEU THR ASP GLN ILE PHE GLU GLY PRO LEU LYS SEQRES 10 A 527 ALA GLU PRO LEU LYS ASP GLU ALA TYR VAL GLN ILE LEU SEQRES 11 A 527 LYS GLN LEU THR ASP ASN HIS ILE ARG TYR SER GLU GLU SEQRES 12 A 527 ARG GLY TRP GLU LEU LEU TRP LEU CYS THR GLY LEU PHE SEQRES 13 A 527 PRO PRO SER ASN ILE LEU LEU PRO HIS VAL GLN ARG PHE SEQRES 14 A 527 LEU GLN SER ARG LYS HIS CYS PRO LEU ALA ILE ASP CYS SEQRES 15 A 527 LEU GLN ARG LEU GLN LYS ALA LEU ARG ASN GLY SER ARG SEQRES 16 A 527 LYS TYR PRO PRO HIS LEU VAL GLU VAL GLU ALA ILE GLN SEQRES 17 A 527 HIS LYS THR THR GLN ILE PHE HIS LYS VAL TYR PHE PRO SEQRES 18 A 527 ASP ASP THR ASP GLU ALA PHE GLU VAL GLU SER SER THR SEQRES 19 A 527 LYS ALA LYS ASP PHE CYS GLN ASN ILE ALA THR ARG LEU SEQRES 20 A 527 LEU LEU LYS SER SER GLU GLY PHE SER LEU PHE VAL LYS SEQRES 21 A 527 ILE ALA ASP LYS VAL LEU SER VAL PRO GLU ASN ASP PHE SEQRES 22 A 527 PHE PHE ASP PHE VAL ARG HIS LEU THR ASP TRP ILE LYS SEQRES 23 A 527 LYS ALA ARG PRO ILE LYS ASP GLY ILE VAL PRO SER LEU SEQRES 24 A 527 THR TYR GLN VAL PHE PHE MET LYS LYS LEU TRP THR THR SEQRES 25 A 527 THR VAL PRO GLY LYS ASP PRO MET ALA ASP SER ILE PHE SEQRES 26 A 527 HIS TYR TYR GLN GLU LEU PRO LYS TYR LEU ARG GLY TYR SEQRES 27 A 527 HIS LYS CYS THR ARG GLU GLU VAL LEU GLN LEU GLY ALA SEQRES 28 A 527 LEU ILE TYR ARG VAL LYS PHE GLU GLU ASP LYS SER TYR SEQRES 29 A 527 PHE PRO SER ILE PRO LYS LEU LEU ARG GLU LEU VAL PRO SEQRES 30 A 527 GLN ASP LEU ILE ARG GLN VAL SER PRO ASP ASP TRP LYS SEQRES 31 A 527 ARG SER ILE VAL ALA TYR PHE ASN LYS HIS ALA GLY LYS SEQRES 32 A 527 SER LYS GLU GLU ALA LYS LEU ALA PHE LEU LYS LEU ILE SEQRES 33 A 527 PHE LYS TRP PRO THR PHE GLY SER ALA PHE PHE GLU VAL SEQRES 34 A 527 LYS GLN THR THR GLU PRO ASN PHE PRO GLU ILE LEU LEU SEQRES 35 A 527 ILE ALA ILE ASN LYS TYR GLY VAL SER LEU ILE ASP PRO SEQRES 36 A 527 LYS THR LYS ASP ILE LEU THR THR HIS PRO PHE THR LYS SEQRES 37 A 527 ILE SER ASN TRP SER SER GLY ASN THR TYR PHE HIS ILE SEQRES 38 A 527 THR ILE GLY ASN LEU VAL ARG GLY SER LYS LEU LEU CYS SEQRES 39 A 527 GLU THR SER LEU GLY TYR LYS MET ASP ASP LEU LEU THR SEQRES 40 A 527 SER TYR ILE SER GLN MET LEU THR ALA MET SER LYS GLN SEQRES 41 A 527 ARG GLY SER ARG SER GLY LYS SEQRES 1 B 130 GLY ALA MET GLY SER GLN ASP PHE ARG LYS TYR GLU GLU SEQRES 2 B 130 GLY PHE ASP PRO TYR SER MET PHE THR PRO GLU GLN ILE SEQRES 3 B 130 MET GLY LYS ASP VAL ARG LEU LEU ARG ILE LYS LYS GLU SEQRES 4 B 130 GLY SER LEU ASP LEU ALA LEU GLU GLY GLY VAL ASP SER SEQRES 5 B 130 PRO ILE GLY LYS VAL VAL VAL SER ALA VAL TYR GLU ARG SEQRES 6 B 130 GLY ALA ALA GLU ARG HIS GLY GLY ILE VAL LYS GLY ASP SEQRES 7 B 130 GLU ILE MET ALA ILE ASN GLY LYS ILE VAL THR ASP TYR SEQRES 8 B 130 THR LEU ALA GLU ALA ASP ALA ALA LEU GLN LYS ALA TRP SEQRES 9 B 130 ASN GLN GLY GLY ASP TRP ILE ASP LEU VAL VAL ALA VAL SEQRES 10 B 130 CYS PRO PRO LYS GLU TYR ASP ASP GLU LEU THR PHE PHE HET ACT A2301 4 HET ACT A2302 4 HETNAM ACT ACETATE ION FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 5 HOH *328(H2 O) HELIX 1 AA1 LEU A 1714 PHE A 1722 1 9 HELIX 2 AA2 LEU A 1757 LEU A 1761 5 5 HELIX 3 AA3 SER A 1763 MET A 1781 1 19 HELIX 4 AA4 ASN A 1793 ALA A 1806 1 14 HELIX 5 AA5 GLU A 1807 THR A 1822 1 16 HELIX 6 AA6 ILE A 1826 GLY A 1842 1 17 HELIX 7 AA7 LEU A 1850 SER A 1860 1 11 HELIX 8 AA8 LEU A 1866 GLY A 1881 1 16 HELIX 9 AA9 HIS A 1888 HIS A 1897 1 10 HELIX 10 AB1 LYS A 1923 LEU A 1935 1 13 HELIX 11 AB2 PHE A 1961 ALA A 1976 1 16 HELIX 12 AB3 ASP A 2006 PHE A 2013 1 8 HELIX 13 AB4 PHE A 2013 GLY A 2025 1 13 HELIX 14 AB5 THR A 2030 GLU A 2047 1 18 HELIX 15 AB6 TYR A 2052 LYS A 2058 5 7 HELIX 16 AB7 LEU A 2059 VAL A 2064 1 6 HELIX 17 AB8 LEU A 2068 VAL A 2072 5 5 HELIX 18 AB9 SER A 2073 ASN A 2086 1 14 HELIX 19 AC1 LYS A 2087 ALA A 2089 5 3 HELIX 20 AC2 SER A 2092 PHE A 2105 1 14 HELIX 21 AC3 PRO A 2153 THR A 2155 5 3 HELIX 22 AC4 LEU A 2186 MET A 2205 1 20 HELIX 23 AC5 ALA B 489 GLY B 494 1 6 HELIX 24 AC6 THR B 514 GLN B 528 1 15 SHEET 1 AA1 2 ILE A1902 PHE A1908 0 SHEET 2 AA1 2 THR A1912 VAL A1918 -1 O PHE A1916 N HIS A1904 SHEET 1 AA2 3 VAL A1953 SER A1955 0 SHEET 2 AA2 3 PHE A1943 ILE A1949 -1 N VAL A1947 O LEU A1954 SHEET 3 AA2 3 TYR A1989 LYS A1995 -1 O PHE A1992 N PHE A1946 SHEET 1 AA3 7 ILE A2148 HIS A2152 0 SHEET 2 AA3 7 GLY A2137 ILE A2141 -1 N VAL A2138 O HIS A2152 SHEET 3 AA3 7 ILE A2128 ASN A2134 -1 N LEU A2130 O ILE A2141 SHEET 4 AA3 7 ALA A2113 GLN A2119 -1 N PHE A2115 O ILE A2131 SHEET 5 AA3 7 LYS A2179 GLU A2183 -1 O GLU A2183 N LYS A2118 SHEET 6 AA3 7 TYR A2166 ILE A2171 -1 N ILE A2169 O LEU A2180 SHEET 7 AA3 7 ILE A2157 SER A2162 -1 N ASN A2159 O THR A2170 SHEET 1 AA4 5 VAL B 453 ILE B 458 0 SHEET 2 AA4 5 ILE B 533 ALA B 538 -1 O VAL B 537 N ARG B 454 SHEET 3 AA4 5 GLU B 501 ILE B 505 -1 N MET B 503 O VAL B 536 SHEET 4 AA4 5 LYS B 478 VAL B 484 -1 N VAL B 479 O ILE B 502 SHEET 5 AA4 5 LEU B 466 GLY B 471 -1 N ALA B 467 O ALA B 483 SHEET 1 AA5 4 VAL B 453 ILE B 458 0 SHEET 2 AA5 4 ILE B 533 ALA B 538 -1 O VAL B 537 N ARG B 454 SHEET 3 AA5 4 GLU B 501 ILE B 505 -1 N MET B 503 O VAL B 536 SHEET 4 AA5 4 LYS B 508 ILE B 509 -1 O LYS B 508 N ILE B 505 SITE 1 AC1 5 PHE A1908 ASP A1910 THR A1912 GLU A1914 SITE 2 AC1 5 LEU A1936 SITE 1 AC2 1 TYR A2136 CRYST1 121.520 151.710 100.800 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008229 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006592 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009921 0.00000