PDB Short entry for 5NNZ HEADER TRANSPORT PROTEIN 10-APR-17 5NNZ TITLE CRYSTAL STRUCTURE OF HUMAN ODA16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: UNP RESIDUES 1-415; COMPND 5 SYNONYM: OUTER ROW DYNEIN ASSEMBLY PROTEIN 16 HOMOLOG,WD REPEAT- COMPND 6 CONTAINING PROTEIN 69; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DAW1, WDR69; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469 KEYWDS CILIUM, SPERM, INTRAFLAGELLAR TRANSPORT, IFT, ODA16, OUTER DYNEIN KEYWDS 2 ARMS, ODA, PRIMARY CILIA DYSKENISIA, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.LORENTZEN,T.TASCHNER,J.BASQUIN REVDAT 4 31-JAN-24 5NNZ 1 REMARK REVDAT 3 26-OCT-22 5NNZ 1 JRNL REVDAT 2 18-NOV-20 5NNZ 1 KEYWDS REVDAT 1 07-JUN-17 5NNZ 0 JRNL AUTH J.WANG,M.TASCHNER,N.A.PETRIMAN,M.B.ANDERSEN,J.BASQUIN, JRNL AUTH 2 S.BHOGARAJU,M.VETTER,S.WACHTER,A.LORENTZEN,E.LORENTZEN JRNL TITL PURIFICATION AND CRYSTAL STRUCTURE OF HUMAN ODA16: JRNL TITL 2 IMPLICATIONS FOR CILIARY IMPORT OF OUTER DYNEIN ARMS BY THE JRNL TITL 3 INTRAFLAGELLAR TRANSPORT MACHINERY. JRNL REF PROTEIN SCI. V. 29 1502 2020 JRNL REFN ESSN 1469-896X JRNL PMID 32239748 JRNL DOI 10.1002/PRO.3864 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1647 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 77.5 REMARK 3 NUMBER OF REFLECTIONS : 16593 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.450 REMARK 3 FREE R VALUE TEST SET COUNT : 904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.1598 - 4.8754 0.94 3305 204 0.2583 0.3005 REMARK 3 2 4.8754 - 3.8701 0.94 3275 180 0.2112 0.2534 REMARK 3 3 3.8701 - 3.3810 0.95 3234 172 0.2122 0.2967 REMARK 3 4 3.3810 - 3.0719 0.94 3226 186 0.2149 0.2697 REMARK 3 5 3.0719 - 2.8518 0.60 2055 107 0.2416 0.3088 REMARK 3 6 2.8518 - 2.6837 0.17 595 32 0.3165 0.3674 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5230 REMARK 3 ANGLE : 1.075 7114 REMARK 3 CHIRALITY : 0.048 823 REMARK 3 PLANARITY : 0.004 905 REMARK 3 DIHEDRAL : 15.132 1800 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NNZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-APR-17. REMARK 100 THE DEPOSITION ID IS D_1200004434. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18102 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5MZH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM TRIS PH 8 AND 50MM NAOXALATE, REMARK 280 EVAPORATION, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.75000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LEU B 3 REMARK 465 LYS B 4 REMARK 465 SER B 5 REMARK 465 LEU B 6 REMARK 465 LEU B 7 REMARK 465 LEU B 8 REMARK 465 ARG B 9 REMARK 465 TYR B 10 REMARK 465 TYR B 11 REMARK 465 PRO B 12 REMARK 465 PRO B 13 REMARK 465 GLY B 14 REMARK 465 ILE B 15 REMARK 465 MET B 16 REMARK 465 LEU B 17 REMARK 465 GLU B 18 REMARK 465 TYR B 19 REMARK 465 GLU B 20 REMARK 465 LYS B 21 REMARK 465 HIS B 22 REMARK 465 GLY B 23 REMARK 465 GLU B 24 REMARK 465 LEU B 25 REMARK 465 LYS B 26 REMARK 465 THR B 27 REMARK 465 LYS B 28 REMARK 465 SER B 29 REMARK 465 ILE B 30 REMARK 465 ASP B 31 REMARK 465 LEU B 32 REMARK 465 LEU B 33 REMARK 465 ASP B 34 REMARK 465 LEU B 35 REMARK 465 GLY B 36 REMARK 465 PRO B 37 REMARK 465 SER B 38 REMARK 465 THR B 39 REMARK 465 ASP B 40 REMARK 465 VAL B 41 REMARK 465 SER B 42 REMARK 465 ALA B 43 REMARK 465 LEU B 44 REMARK 465 VAL B 45 REMARK 465 GLU B 46 REMARK 465 GLU B 47 REMARK 465 ILE B 48 REMARK 465 GLN B 49 REMARK 465 LYS B 50 REMARK 465 ALA B 51 REMARK 465 GLU B 52 REMARK 465 PRO B 53 REMARK 465 LEU B 54 REMARK 465 LEU B 55 REMARK 465 THR B 56 REMARK 465 ALA B 57 REMARK 465 SER B 58 REMARK 465 ARG B 59 REMARK 465 THR B 60 REMARK 465 GLU B 61 REMARK 465 GLN B 62 REMARK 465 VAL B 63 REMARK 465 LYS B 64 REMARK 465 LEU B 65 REMARK 465 LEU B 66 REMARK 465 ILE B 67 REMARK 465 GLN B 68 REMARK 465 ARG B 69 REMARK 465 LEU B 70 REMARK 465 GLN B 71 REMARK 465 GLU B 72 REMARK 465 LYS B 73 REMARK 465 LEU B 74 REMARK 465 GLY B 75 REMARK 465 GLN B 76 REMARK 465 ASN B 77 REMARK 465 SER B 78 REMARK 465 ASN B 79 REMARK 465 HIS B 80 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 LYS A 4 REMARK 465 SER A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 LEU A 8 REMARK 465 ARG A 9 REMARK 465 TYR A 10 REMARK 465 TYR A 11 REMARK 465 PRO A 12 REMARK 465 PRO A 13 REMARK 465 GLY A 14 REMARK 465 ILE A 15 REMARK 465 MET A 16 REMARK 465 LEU A 17 REMARK 465 GLU A 18 REMARK 465 TYR A 19 REMARK 465 GLU A 20 REMARK 465 LYS A 21 REMARK 465 HIS A 22 REMARK 465 GLY A 23 REMARK 465 GLU A 24 REMARK 465 LEU A 25 REMARK 465 LYS A 26 REMARK 465 THR A 27 REMARK 465 LYS A 28 REMARK 465 SER A 29 REMARK 465 ILE A 30 REMARK 465 ASP A 31 REMARK 465 LEU A 32 REMARK 465 LEU A 33 REMARK 465 ASP A 34 REMARK 465 LEU A 35 REMARK 465 GLY A 36 REMARK 465 PRO A 37 REMARK 465 SER A 38 REMARK 465 THR A 39 REMARK 465 ASP A 40 REMARK 465 VAL A 41 REMARK 465 SER A 42 REMARK 465 ALA A 43 REMARK 465 LEU A 44 REMARK 465 VAL A 45 REMARK 465 GLU A 46 REMARK 465 GLU A 47 REMARK 465 ILE A 48 REMARK 465 GLN A 49 REMARK 465 LYS A 50 REMARK 465 ALA A 51 REMARK 465 GLU A 52 REMARK 465 PRO A 53 REMARK 465 LEU A 54 REMARK 465 LEU A 55 REMARK 465 THR A 56 REMARK 465 ALA A 57 REMARK 465 SER A 58 REMARK 465 ARG A 59 REMARK 465 THR A 60 REMARK 465 GLU A 61 REMARK 465 GLN A 62 REMARK 465 VAL A 63 REMARK 465 LYS A 64 REMARK 465 LEU A 65 REMARK 465 LEU A 66 REMARK 465 ILE A 67 REMARK 465 GLN A 68 REMARK 465 ARG A 69 REMARK 465 LEU A 70 REMARK 465 GLN A 71 REMARK 465 GLU A 72 REMARK 465 LYS A 73 REMARK 465 LEU A 74 REMARK 465 GLY A 75 REMARK 465 GLN A 76 REMARK 465 ASN A 77 REMARK 465 SER A 78 REMARK 465 ASN A 79 REMARK 465 HIS A 80 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 GLN B 188 CG CD OE1 NE2 REMARK 470 ARG B 252 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 313 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 407 CG CD CE NZ REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 GLN A 188 CG CD OE1 NE2 REMARK 470 ARG A 252 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 253 CG CD CE NZ REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 TYR A 313 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 336 CG CD CE NZ REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 ARG A 415 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 126 OG1 THR A 129 2.06 REMARK 500 OD1 ASN A 354 N GLY A 357 2.09 REMARK 500 OG SER A 265 O ILE A 306 2.12 REMARK 500 N ASP A 205 O GLU A 210 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE B 85 -62.98 -96.28 REMARK 500 THR B 96 -63.67 -92.71 REMARK 500 ARG B 114 16.36 56.87 REMARK 500 ARG B 114 17.13 56.14 REMARK 500 ASN B 143 24.45 -79.57 REMARK 500 PHE B 155 31.35 -78.92 REMARK 500 LYS B 157 -17.42 71.16 REMARK 500 SER B 230 -9.27 85.22 REMARK 500 ARG B 335 -0.08 67.31 REMARK 500 SER B 352 142.11 -171.42 REMARK 500 ASP B 366 24.56 -78.48 REMARK 500 PHE A 85 -69.38 -92.79 REMARK 500 THR A 96 -62.04 -91.42 REMARK 500 ASN A 143 27.41 -79.95 REMARK 500 PHE A 155 33.89 -74.14 REMARK 500 ASP A 156 -150.82 -130.43 REMARK 500 THR A 190 -91.39 -61.58 REMARK 500 SER A 226 142.01 -170.86 REMARK 500 SER A 230 -14.07 87.72 REMARK 500 ASP A 249 -70.40 -65.14 REMARK 500 ASP A 282 30.78 -94.76 REMARK 500 ARG A 335 -2.18 63.45 REMARK 500 SER A 352 139.52 -170.10 REMARK 500 ASP A 366 -97.75 -74.71 REMARK 500 ASP A 388 -157.77 -152.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 367 THR A 368 -146.99 REMARK 500 THR A 368 ALA A 369 146.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 556 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B 557 DISTANCE = 7.76 ANGSTROMS REMARK 525 HOH B 558 DISTANCE = 7.78 ANGSTROMS REMARK 525 HOH A 562 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 563 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A 564 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH A 565 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 566 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A 567 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH A 568 DISTANCE = 7.38 ANGSTROMS REMARK 525 HOH A 569 DISTANCE = 7.41 ANGSTROMS REMARK 525 HOH A 570 DISTANCE = 7.45 ANGSTROMS REMARK 525 HOH A 571 DISTANCE = 8.10 ANGSTROMS REMARK 525 HOH A 572 DISTANCE = 8.42 ANGSTROMS REMARK 525 HOH A 573 DISTANCE = 8.47 ANGSTROMS REMARK 525 HOH A 574 DISTANCE = 8.91 ANGSTROMS DBREF 5NNZ B 1 415 UNP Q8N136 DAW1_HUMAN 1 415 DBREF 5NNZ A 1 415 UNP Q8N136 DAW1_HUMAN 1 415 SEQRES 1 B 415 MET LYS LEU LYS SER LEU LEU LEU ARG TYR TYR PRO PRO SEQRES 2 B 415 GLY ILE MET LEU GLU TYR GLU LYS HIS GLY GLU LEU LYS SEQRES 3 B 415 THR LYS SER ILE ASP LEU LEU ASP LEU GLY PRO SER THR SEQRES 4 B 415 ASP VAL SER ALA LEU VAL GLU GLU ILE GLN LYS ALA GLU SEQRES 5 B 415 PRO LEU LEU THR ALA SER ARG THR GLU GLN VAL LYS LEU SEQRES 6 B 415 LEU ILE GLN ARG LEU GLN GLU LYS LEU GLY GLN ASN SER SEQRES 7 B 415 ASN HIS THR PHE TYR LEU PHE LYS VAL LEU LYS ALA HIS SEQRES 8 B 415 ILE LEU PRO LEU THR ASN VAL ALA LEU ASN LYS SER GLY SEQRES 9 B 415 SER CYS PHE ILE THR GLY SER TYR ASP ARG THR CYS LYS SEQRES 10 B 415 LEU TRP ASP THR ALA SER GLY GLU GLU LEU ASN THR LEU SEQRES 11 B 415 GLU GLY HIS ARG ASN VAL VAL TYR ALA ILE ALA PHE ASN SEQRES 12 B 415 ASN PRO TYR GLY ASP LYS ILE ALA THR GLY SER PHE ASP SEQRES 13 B 415 LYS THR CYS LYS LEU TRP SER VAL GLU THR GLY LYS CYS SEQRES 14 B 415 TYR HIS THR PHE ARG GLY HIS THR ALA GLU ILE VAL CYS SEQRES 15 B 415 LEU SER PHE ASN PRO GLN SER THR LEU VAL ALA THR GLY SEQRES 16 B 415 SER MET ASP THR THR ALA LYS LEU TRP ASP ILE GLN ASN SEQRES 17 B 415 GLY GLU GLU VAL TYR THR LEU ARG GLY HIS SER ALA GLU SEQRES 18 B 415 ILE ILE SER LEU SER PHE ASN THR SER GLY ASP ARG ILE SEQRES 19 B 415 ILE THR GLY SER PHE ASP HIS THR VAL VAL VAL TRP ASP SEQRES 20 B 415 ALA ASP THR GLY ARG LYS VAL ASN ILE LEU ILE GLY HIS SEQRES 21 B 415 CYS ALA GLU ILE SER SER ALA SER PHE ASN TRP ASP CYS SEQRES 22 B 415 SER LEU ILE LEU THR GLY SER MET ASP LYS THR CYS LYS SEQRES 23 B 415 LEU TRP ASP ALA THR ASN GLY LYS CYS VAL ALA THR LEU SEQRES 24 B 415 THR GLY HIS ASP ASP GLU ILE LEU ASP SER CYS PHE ASP SEQRES 25 B 415 TYR THR GLY LYS LEU ILE ALA THR ALA SER ALA ASP GLY SEQRES 26 B 415 THR ALA ARG ILE PHE SER ALA ALA THR ARG LYS CYS ILE SEQRES 27 B 415 ALA LYS LEU GLU GLY HIS GLU GLY GLU ILE SER LYS ILE SEQRES 28 B 415 SER PHE ASN PRO GLN GLY ASN HIS LEU LEU THR GLY SER SEQRES 29 B 415 SER ASP LYS THR ALA ARG ILE TRP ASP ALA GLN THR GLY SEQRES 30 B 415 GLN CYS LEU GLN VAL LEU GLU GLY HIS THR ASP GLU ILE SEQRES 31 B 415 PHE SER CYS ALA PHE ASN TYR LYS GLY ASN ILE VAL ILE SEQRES 32 B 415 THR GLY SER LYS ASP ASN THR CYS ARG ILE TRP ARG SEQRES 1 A 415 MET LYS LEU LYS SER LEU LEU LEU ARG TYR TYR PRO PRO SEQRES 2 A 415 GLY ILE MET LEU GLU TYR GLU LYS HIS GLY GLU LEU LYS SEQRES 3 A 415 THR LYS SER ILE ASP LEU LEU ASP LEU GLY PRO SER THR SEQRES 4 A 415 ASP VAL SER ALA LEU VAL GLU GLU ILE GLN LYS ALA GLU SEQRES 5 A 415 PRO LEU LEU THR ALA SER ARG THR GLU GLN VAL LYS LEU SEQRES 6 A 415 LEU ILE GLN ARG LEU GLN GLU LYS LEU GLY GLN ASN SER SEQRES 7 A 415 ASN HIS THR PHE TYR LEU PHE LYS VAL LEU LYS ALA HIS SEQRES 8 A 415 ILE LEU PRO LEU THR ASN VAL ALA LEU ASN LYS SER GLY SEQRES 9 A 415 SER CYS PHE ILE THR GLY SER TYR ASP ARG THR CYS LYS SEQRES 10 A 415 LEU TRP ASP THR ALA SER GLY GLU GLU LEU ASN THR LEU SEQRES 11 A 415 GLU GLY HIS ARG ASN VAL VAL TYR ALA ILE ALA PHE ASN SEQRES 12 A 415 ASN PRO TYR GLY ASP LYS ILE ALA THR GLY SER PHE ASP SEQRES 13 A 415 LYS THR CYS LYS LEU TRP SER VAL GLU THR GLY LYS CYS SEQRES 14 A 415 TYR HIS THR PHE ARG GLY HIS THR ALA GLU ILE VAL CYS SEQRES 15 A 415 LEU SER PHE ASN PRO GLN SER THR LEU VAL ALA THR GLY SEQRES 16 A 415 SER MET ASP THR THR ALA LYS LEU TRP ASP ILE GLN ASN SEQRES 17 A 415 GLY GLU GLU VAL TYR THR LEU ARG GLY HIS SER ALA GLU SEQRES 18 A 415 ILE ILE SER LEU SER PHE ASN THR SER GLY ASP ARG ILE SEQRES 19 A 415 ILE THR GLY SER PHE ASP HIS THR VAL VAL VAL TRP ASP SEQRES 20 A 415 ALA ASP THR GLY ARG LYS VAL ASN ILE LEU ILE GLY HIS SEQRES 21 A 415 CYS ALA GLU ILE SER SER ALA SER PHE ASN TRP ASP CYS SEQRES 22 A 415 SER LEU ILE LEU THR GLY SER MET ASP LYS THR CYS LYS SEQRES 23 A 415 LEU TRP ASP ALA THR ASN GLY LYS CYS VAL ALA THR LEU SEQRES 24 A 415 THR GLY HIS ASP ASP GLU ILE LEU ASP SER CYS PHE ASP SEQRES 25 A 415 TYR THR GLY LYS LEU ILE ALA THR ALA SER ALA ASP GLY SEQRES 26 A 415 THR ALA ARG ILE PHE SER ALA ALA THR ARG LYS CYS ILE SEQRES 27 A 415 ALA LYS LEU GLU GLY HIS GLU GLY GLU ILE SER LYS ILE SEQRES 28 A 415 SER PHE ASN PRO GLN GLY ASN HIS LEU LEU THR GLY SER SEQRES 29 A 415 SER ASP LYS THR ALA ARG ILE TRP ASP ALA GLN THR GLY SEQRES 30 A 415 GLN CYS LEU GLN VAL LEU GLU GLY HIS THR ASP GLU ILE SEQRES 31 A 415 PHE SER CYS ALA PHE ASN TYR LYS GLY ASN ILE VAL ILE SEQRES 32 A 415 THR GLY SER LYS ASP ASN THR CYS ARG ILE TRP ARG FORMUL 3 HOH *132(H2 O) HELIX 1 AA1 PRO B 187 SER B 189 5 3 HELIX 2 AA2 PRO A 187 THR A 190 5 4 SHEET 1 AA1 4 TYR B 83 LYS B 89 0 SHEET 2 AA1 4 THR B 410 ARG B 415 -1 O ILE B 413 N PHE B 85 SHEET 3 AA1 4 VAL B 402 SER B 406 -1 N VAL B 402 O TRP B 414 SHEET 4 AA1 4 ILE B 390 PHE B 395 -1 N ALA B 394 O ILE B 403 SHEET 1 AA2 4 LEU B 95 LEU B 100 0 SHEET 2 AA2 4 CYS B 106 SER B 111 -1 O ILE B 108 N ALA B 99 SHEET 3 AA2 4 CYS B 116 ASP B 120 -1 O LYS B 117 N THR B 109 SHEET 4 AA2 4 GLU B 126 LEU B 130 -1 O LEU B 130 N CYS B 116 SHEET 1 AA3 4 VAL B 137 PHE B 142 0 SHEET 2 AA3 4 LYS B 149 SER B 154 -1 O GLY B 153 N ALA B 139 SHEET 3 AA3 4 CYS B 159 SER B 163 -1 O TRP B 162 N ILE B 150 SHEET 4 AA3 4 CYS B 169 PHE B 173 -1 O TYR B 170 N LEU B 161 SHEET 1 AA4 4 ILE B 180 PHE B 185 0 SHEET 2 AA4 4 LEU B 191 SER B 196 -1 O GLY B 195 N CYS B 182 SHEET 3 AA4 4 THR B 200 ASP B 205 -1 O TRP B 204 N VAL B 192 SHEET 4 AA4 4 GLU B 211 ARG B 216 -1 O VAL B 212 N LEU B 203 SHEET 1 AA5 4 ILE B 222 PHE B 227 0 SHEET 2 AA5 4 ARG B 233 SER B 238 -1 O ILE B 235 N SER B 226 SHEET 3 AA5 4 VAL B 243 ASP B 247 -1 O TRP B 246 N ILE B 234 SHEET 4 AA5 4 LYS B 253 LEU B 257 -1 O LEU B 257 N VAL B 243 SHEET 1 AA6 4 ILE B 264 PHE B 269 0 SHEET 2 AA6 4 LEU B 275 SER B 280 -1 O GLY B 279 N SER B 266 SHEET 3 AA6 4 CYS B 285 ASP B 289 -1 O TRP B 288 N ILE B 276 SHEET 4 AA6 4 CYS B 295 LEU B 299 -1 O LEU B 299 N CYS B 285 SHEET 1 AA7 4 ILE B 306 PHE B 311 0 SHEET 2 AA7 4 LEU B 317 SER B 322 -1 O ALA B 319 N CYS B 310 SHEET 3 AA7 4 ALA B 327 SER B 331 -1 O ARG B 328 N THR B 320 SHEET 4 AA7 4 CYS B 337 LEU B 341 -1 O ILE B 338 N ILE B 329 SHEET 1 AA8 4 ILE B 348 PHE B 353 0 SHEET 2 AA8 4 HIS B 359 SER B 364 -1 O LEU B 361 N SER B 352 SHEET 3 AA8 4 ALA B 369 ASP B 373 -1 O TRP B 372 N LEU B 360 SHEET 4 AA8 4 CYS B 379 LEU B 383 -1 O LEU B 383 N ALA B 369 SHEET 1 AA9 4 TYR A 83 LEU A 84 0 SHEET 2 AA9 4 CYS A 411 ARG A 415 -1 O ARG A 415 N TYR A 83 SHEET 3 AA9 4 VAL A 402 SER A 406 -1 N VAL A 402 O TRP A 414 SHEET 4 AA9 4 ILE A 390 PHE A 395 -1 N ALA A 394 O ILE A 403 SHEET 1 AB1 4 LEU A 95 LEU A 100 0 SHEET 2 AB1 4 CYS A 106 SER A 111 -1 O ILE A 108 N ALA A 99 SHEET 3 AB1 4 CYS A 116 ASP A 120 -1 O TRP A 119 N PHE A 107 SHEET 4 AB1 4 GLU A 126 LEU A 130 -1 O LEU A 130 N CYS A 116 SHEET 1 AB2 4 VAL A 137 PHE A 142 0 SHEET 2 AB2 4 LYS A 149 SER A 154 -1 O GLY A 153 N ALA A 139 SHEET 3 AB2 4 THR A 158 SER A 163 -1 O TRP A 162 N ILE A 150 SHEET 4 AB2 4 CYS A 169 ARG A 174 -1 O TYR A 170 N LEU A 161 SHEET 1 AB3 4 ILE A 180 PHE A 185 0 SHEET 2 AB3 4 VAL A 192 SER A 196 -1 O GLY A 195 N CYS A 182 SHEET 3 AB3 4 ALA A 201 TRP A 204 -1 O TRP A 204 N VAL A 192 SHEET 4 AB3 4 GLU A 211 LEU A 215 -1 O LEU A 215 N ALA A 201 SHEET 1 AB4 3 ARG A 233 GLY A 237 0 SHEET 2 AB4 3 THR A 242 ASP A 247 -1 O TRP A 246 N ILE A 234 SHEET 3 AB4 3 LYS A 253 ILE A 258 -1 O VAL A 254 N VAL A 245 SHEET 1 AB5 4 ILE A 264 PHE A 269 0 SHEET 2 AB5 4 LEU A 275 SER A 280 -1 O GLY A 279 N SER A 266 SHEET 3 AB5 4 CYS A 285 ASP A 289 -1 O LYS A 286 N THR A 278 SHEET 4 AB5 4 CYS A 295 LEU A 299 -1 O LEU A 299 N CYS A 285 SHEET 1 AB6 4 ILE A 306 PHE A 311 0 SHEET 2 AB6 4 LEU A 317 SER A 322 -1 O ALA A 321 N ASP A 308 SHEET 3 AB6 4 ALA A 327 SER A 331 -1 O PHE A 330 N ILE A 318 SHEET 4 AB6 4 CYS A 337 LEU A 341 -1 O LEU A 341 N ALA A 327 SHEET 1 AB7 4 ILE A 348 PHE A 353 0 SHEET 2 AB7 4 HIS A 359 SER A 364 -1 O LEU A 361 N SER A 352 SHEET 3 AB7 4 ALA A 369 ASP A 373 -1 O TRP A 372 N LEU A 360 SHEET 4 AB7 4 CYS A 379 LEU A 383 -1 O GLN A 381 N ILE A 371 CISPEP 1 ASN B 144 PRO B 145 0 5.26 CISPEP 2 ASN A 144 PRO A 145 0 4.19 CRYST1 52.150 69.500 102.150 90.00 90.01 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019175 0.000000 0.000003 0.00000 SCALE2 0.000000 0.014388 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009790 0.00000