PDB Short entry for 5QJC HEADER HYDROLASE 31-OCT-18 5QJC TITLE PANDDA ANALYSIS GROUP DEPOSITION OF MODELS WITH MODELLED EVENTS (E.G. TITLE 2 BOUND LIGANDS) -- CRYSTAL STRUCTURE OF NUDT5 IN COMPLEX WITH TITLE 3 Z755044716 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-SUGAR PYROPHOSPHATASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 8-OXO-DGDP PHOSPHATASE,NUCLEAR ATP-SYNTHESIS PROTEIN NUDIX5, COMPND 5 NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 5,HNUDT5,YSA1H; COMPND 6 EC: 3.6.1.13,3.6.1.58,2.7.7.96; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUDT5, NUDIX5, HSPC115; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SGC - DIAMOND I04-1 FRAGMENT SCREENING, PANDDA, XCHEMEXPLORER, NUDT5, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.DUBIANOK,P.COLLINS,T.KROJER,N.WRIGHT,C.STRAIN-DAMERELL,N.BURGESS- AUTHOR 2 BROWN,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS,K.HUBER,F.VON DELFT REVDAT 2 06-MAR-24 5QJC 1 LINK REVDAT 1 19-DEC-18 5QJC 0 JRNL AUTH Y.DUBIANOK,P.COLLINS,T.KROJER,N.WRIGHT,C.STRAIN-DAMERELL, JRNL AUTH 2 N.BURGESS-BROWN,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS,K.HUBER, JRNL AUTH 3 F.VON DELFT JRNL TITL PANDDA ANALYSIS GROUP DEPOSITION OF MODELS WITH MODELLED JRNL TITL 2 EVENTS (E.G. BOUND LIGANDS) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 130226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6922 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8528 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.4170 REMARK 3 BIN FREE R VALUE SET COUNT : 409 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5743 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.71000 REMARK 3 B22 (A**2) : -0.19000 REMARK 3 B33 (A**2) : -1.32000 REMARK 3 B12 (A**2) : 1.21000 REMARK 3 B13 (A**2) : 0.95000 REMARK 3 B23 (A**2) : 0.83000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.091 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.634 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7773 ; 0.018 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 6294 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9529 ; 1.979 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14533 ; 1.061 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 928 ; 7.188 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 272 ;35.952 ;24.485 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1037 ;15.102 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;13.763 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1090 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8130 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1359 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4107 ; 2.947 ; 3.405 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4034 ; 2.974 ; 3.406 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4596 ; 4.099 ; 5.076 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5QJC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1001402021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 137149 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 57.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.02700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.40 REMARK 200 R MERGE FOR SHELL (I) : 0.96000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 6GRU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 33 % PEG4K, 0.2 MGCL2 AND 0.1 M TRIS, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 GLU A 5 REMARK 465 PRO A 6 REMARK 465 THR A 7 REMARK 465 GLU A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 GLN A 11 REMARK 465 ASN A 12 REMARK 465 GLY A 13 REMARK 465 ASN A 208 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 GLU B 5 REMARK 465 PRO B 6 REMARK 465 THR B 7 REMARK 465 GLU B 8 REMARK 465 SER B 9 REMARK 465 SER B 10 REMARK 465 GLN B 11 REMARK 465 ASN B 12 REMARK 465 GLY B 13 REMARK 465 GLU B 56 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 SER C 3 REMARK 465 GLN C 4 REMARK 465 GLU C 5 REMARK 465 PRO C 6 REMARK 465 THR C 7 REMARK 465 GLU C 8 REMARK 465 SER C 9 REMARK 465 SER C 10 REMARK 465 GLN C 11 REMARK 465 ASN C 12 REMARK 465 GLY C 13 REMARK 465 LYS C 14 REMARK 465 GLU C 56 REMARK 465 ASN C 208 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 GLU D 2 REMARK 465 SER D 3 REMARK 465 GLN D 4 REMARK 465 GLU D 5 REMARK 465 PRO D 6 REMARK 465 THR D 7 REMARK 465 GLU D 8 REMARK 465 SER D 9 REMARK 465 SER D 10 REMARK 465 GLN D 11 REMARK 465 ASN D 12 REMARK 465 GLY D 13 REMARK 465 ARG D 54 REMARK 465 LYS D 55 REMARK 465 GLU D 56 REMARK 465 GLN D 57 REMARK 465 THR D 58 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 GLN A 57 CG CD OE1 NE2 REMARK 470 ASP A 101 CG OD1 OD2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 161 CG CD CE NZ REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 GLU A 189 CG CD OE1 OE2 REMARK 470 HIS A 190 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 27 CG CD CE NZ REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 GLN B 57 CG CD OE1 NE2 REMARK 470 THR B 58 OG1 CG2 REMARK 470 ASP B 101 CG OD1 OD2 REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 ARG B 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 LYS B 161 CG CD CE NZ REMARK 470 GLU B 169 CG CD OE1 OE2 REMARK 470 GLN B 180 CG CD OE1 NE2 REMARK 470 GLU C 20 CG CD OE1 OE2 REMARK 470 GLU C 21 CG CD OE1 OE2 REMARK 470 ILE C 23 CG1 CG2 CD1 REMARK 470 SER C 24 OG REMARK 470 GLU C 25 CG CD OE1 OE2 REMARK 470 LYS C 27 CG CD CE NZ REMARK 470 LYS C 30 CG CD CE NZ REMARK 470 LYS C 33 CG CD CE NZ REMARK 470 MET C 37 CG SD CE REMARK 470 PRO C 39 CG CD REMARK 470 LYS C 42 CG CD CE NZ REMARK 470 LYS C 50 CG CD CE NZ REMARK 470 ARG C 54 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 55 CG CD CE NZ REMARK 470 THR C 58 OG1 CG2 REMARK 470 ARG C 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 159 CG CD CE NZ REMARK 470 LYS C 161 CG CD CE NZ REMARK 470 GLN C 180 CG CD OE1 NE2 REMARK 470 GLU C 188 CG CD OE1 OE2 REMARK 470 GLU D 20 CG CD OE1 OE2 REMARK 470 GLU D 25 CG CD OE1 OE2 REMARK 470 LYS D 27 CG CD CE NZ REMARK 470 LYS D 30 CG CD CE NZ REMARK 470 LYS D 33 CG CD CE NZ REMARK 470 THR D 53 OG1 CG2 REMARK 470 LYS D 81 CG CD CE NZ REMARK 470 ASP D 101 CG OD1 OD2 REMARK 470 GLU D 114 CG CD OE1 OE2 REMARK 470 LYS D 120 CG CD CE NZ REMARK 470 ASP D 122 CG OD1 OD2 REMARK 470 ARG D 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 159 CG CD CE NZ REMARK 470 ASP D 164 CG OD1 OD2 REMARK 470 GLU D 169 CG CD OE1 OE2 REMARK 470 GLN D 180 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 473 O HOH B 469 1.94 REMARK 500 OE1 GLU C 125 O HOH C 401 2.10 REMARK 500 O GLY D 150 O HOH D 401 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR B 198 CE1 TYR B 198 CZ -0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 54 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 70 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 51 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 111 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 196 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASP C 151 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG C 196 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ASP D 133 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG D 196 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG D 196 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 55 -102.29 -108.65 REMARK 500 ASP A 133 76.94 -166.17 REMARK 500 ARG A 157 67.77 -115.95 REMARK 500 LYS A 161 76.23 -107.03 REMARK 500 ASP A 177 32.06 -141.93 REMARK 500 LEU A 191 141.59 -170.76 REMARK 500 ASP B 133 77.05 -159.74 REMARK 500 LYS B 161 79.23 -108.60 REMARK 500 SER C 24 141.09 173.34 REMARK 500 ASP C 133 78.54 -161.95 REMARK 500 LYS C 161 77.81 -101.31 REMARK 500 ASP C 177 30.63 -140.72 REMARK 500 THR D 52 63.45 -108.80 REMARK 500 ASP D 133 86.25 -160.96 REMARK 500 LEU D 136 -53.69 -120.15 REMARK 500 ASP D 177 33.18 -141.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 96 O REMARK 620 2 GLU A 116 OE2 88.7 REMARK 620 3 HOH A 411 O 91.3 78.9 REMARK 620 4 HOH A 447 O 176.6 92.0 92.1 REMARK 620 5 HOH A 462 O 92.5 89.2 167.4 84.2 REMARK 620 6 HOH A 465 O 89.5 177.7 99.7 89.8 92.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 112 OE2 REMARK 620 2 GLU A 166 OE2 126.6 REMARK 620 3 HOH A 420 O 73.9 82.6 REMARK 620 4 HOH A 462 O 91.4 97.8 161.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 96 O REMARK 620 2 GLU B 116 OE2 91.4 REMARK 620 3 HOH B 423 O 93.0 82.5 REMARK 620 4 HOH B 431 O 176.0 91.1 90.4 REMARK 620 5 HOH B 440 O 87.3 178.5 96.8 90.3 REMARK 620 6 HOH B 442 O 88.0 92.0 174.4 88.8 88.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 304 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 401 O REMARK 620 2 HOH B 442 O 79.9 REMARK 620 3 HOH B 471 O 135.8 140.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA C 96 O REMARK 620 2 GLU C 116 OE2 58.2 REMARK 620 3 HOH C 403 O 101.9 57.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA C 96 O REMARK 620 2 GLU C 116 OE2 84.0 REMARK 620 3 HOH C 426 O 171.0 90.9 REMARK 620 4 HOH C 435 O 97.2 85.4 89.6 REMARK 620 5 HOH C 458 O 90.8 174.8 94.2 95.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA D 96 O REMARK 620 2 GLU D 116 OE2 93.4 REMARK 620 3 HOH D 408 O 89.1 80.3 REMARK 620 4 HOH D 418 O 80.0 173.4 98.3 REMARK 620 5 HOH D 426 O 173.4 87.8 97.5 98.9 REMARK 620 6 HOH D 447 O 111.1 118.8 149.9 65.3 62.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 112 OE2 REMARK 620 2 GLU D 116 OE2 77.3 REMARK 620 3 HOH D 426 O 135.2 58.4 REMARK 620 4 HOH D 447 O 163.9 118.6 60.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K0J A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K0J C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 303 DBREF 5QJC A 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 DBREF 5QJC B 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 DBREF 5QJC C 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 DBREF 5QJC D 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 SEQADV 5QJC SER A 0 UNP Q9UKK9 EXPRESSION TAG SEQADV 5QJC SER B 0 UNP Q9UKK9 EXPRESSION TAG SEQADV 5QJC SER C 0 UNP Q9UKK9 EXPRESSION TAG SEQADV 5QJC SER D 0 UNP Q9UKK9 EXPRESSION TAG SEQRES 1 A 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 A 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 A 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 A 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 A 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 A 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 A 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 A 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 A 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 A 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 A 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 A 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 A 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 A 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 A 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 A 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 A 209 ASN SEQRES 1 B 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 B 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 B 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 B 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 B 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 B 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 B 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 B 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 B 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 B 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 B 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 B 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 B 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 B 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 B 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 B 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 B 209 ASN SEQRES 1 C 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 C 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 C 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 C 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 C 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 C 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 C 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 C 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 C 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 C 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 C 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 C 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 C 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 C 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 C 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 C 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 C 209 ASN SEQRES 1 D 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 D 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 D 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 D 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 D 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 D 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 D 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 D 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 D 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 D 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 D 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 D 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 D 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 D 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 D 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 D 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 D 209 ASN HET MG A 301 1 HET MG A 302 1 HET K0J A 303 10 HET EDO A 304 4 HET CL B 301 1 HET EDO B 302 4 HET MG B 303 1 HET MG B 304 1 HET EDO B 305 4 HET EDO C 301 4 HET MG C 302 1 HET MG C 303 1 HET K0J C 304 10 HET EDO C 305 4 HET MG D 301 1 HET MG D 302 1 HET EDO D 303 4 HETNAM MG MAGNESIUM ION HETNAM K0J N-ETHYL-1H-1,2,3-TRIAZOLE-4-CARBOXAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 5 MG 8(MG 2+) FORMUL 7 K0J 2(C5 H8 N4 O) FORMUL 8 EDO 6(C2 H6 O2) FORMUL 9 CL CL 1- FORMUL 22 HOH *290(H2 O) HELIX 1 AA1 THR A 104 GLY A 118 1 15 HELIX 2 AA2 ASP A 152 ALA A 156 5 5 HELIX 3 AA3 ASP A 177 GLU A 188 1 12 HELIX 4 AA4 ASP A 194 ALA A 207 1 14 HELIX 5 AA5 THR B 104 GLY B 118 1 15 HELIX 6 AA6 ASP B 152 ALA B 156 5 5 HELIX 7 AA7 ASP B 177 HIS B 190 1 14 HELIX 8 AA8 ASP B 194 ALA B 207 1 14 HELIX 9 AA9 PRO C 85 GLY C 88 5 4 HELIX 10 AB1 THR C 104 GLY C 118 1 15 HELIX 11 AB2 ASP C 152 ALA C 156 5 5 HELIX 12 AB3 ASP C 177 GLU C 189 1 13 HELIX 13 AB4 ASP C 194 ALA C 207 1 14 HELIX 14 AB5 PRO D 85 GLY D 88 5 4 HELIX 15 AB6 THR D 104 GLY D 118 1 15 HELIX 16 AB7 ASP D 152 ALA D 156 5 5 HELIX 17 AB8 ASP D 177 GLU D 189 1 13 HELIX 18 AB9 ASP D 194 ALA D 207 1 14 SHEET 1 AA1 3 TYR A 16 GLU A 25 0 SHEET 2 AA1 3 VAL A 29 MET A 37 -1 O LYS A 33 N GLU A 21 SHEET 3 AA1 3 THR A 43 ARG A 51 -1 O TRP A 46 N THR A 34 SHEET 1 AA2 6 ASP A 122 CYS A 126 0 SHEET 2 AA2 6 THR A 140 ASN A 149 -1 O THR A 145 N ALA A 124 SHEET 3 AA2 6 GLY A 61 GLN A 69 1 N GLN A 69 O ILE A 148 SHEET 4 AA2 6 CYS A 76 ARG A 84 -1 O CYS A 76 N LEU A 68 SHEET 5 AA2 6 GLY A 89 GLU A 93 -1 O GLY A 89 N ARG A 84 SHEET 6 AA2 6 THR A 192 VAL A 193 1 O THR A 192 N ILE A 92 SHEET 1 AA3 4 VAL A 130 CYS A 131 0 SHEET 2 AA3 4 THR A 140 ASN A 149 -1 O ILE A 141 N VAL A 130 SHEET 3 AA3 4 GLY A 61 GLN A 69 1 N GLN A 69 O ILE A 148 SHEET 4 AA3 4 ALA A 96 LEU A 98 -1 O GLY A 97 N VAL A 62 SHEET 1 AA4 5 VAL A 130 CYS A 131 0 SHEET 2 AA4 5 THR A 140 ASN A 149 -1 O ILE A 141 N VAL A 130 SHEET 3 AA4 5 GLY A 61 GLN A 69 1 N GLN A 69 O ILE A 148 SHEET 4 AA4 5 CYS A 76 ARG A 84 -1 O CYS A 76 N LEU A 68 SHEET 5 AA4 5 GLU A 169 PRO A 174 -1 O LEU A 173 N ILE A 77 SHEET 1 AA5 3 TYR B 16 GLU B 25 0 SHEET 2 AA5 3 VAL B 29 MET B 37 -1 O THR B 35 N SER B 19 SHEET 3 AA5 3 THR B 43 ARG B 51 -1 O TRP B 46 N THR B 34 SHEET 1 AA6 6 ASP B 122 CYS B 126 0 SHEET 2 AA6 6 THR B 140 ASN B 149 -1 O THR B 145 N ALA B 124 SHEET 3 AA6 6 GLY B 61 GLN B 69 1 N VAL B 67 O ILE B 148 SHEET 4 AA6 6 CYS B 76 ARG B 84 -1 O VAL B 78 N PRO B 66 SHEET 5 AA6 6 GLY B 89 GLU B 93 -1 O GLU B 93 N VAL B 80 SHEET 6 AA6 6 THR B 192 VAL B 193 1 O THR B 192 N ILE B 92 SHEET 1 AA7 4 VAL B 130 CYS B 131 0 SHEET 2 AA7 4 THR B 140 ASN B 149 -1 O ILE B 141 N VAL B 130 SHEET 3 AA7 4 GLY B 61 GLN B 69 1 N VAL B 67 O ILE B 148 SHEET 4 AA7 4 ALA B 96 LEU B 98 -1 O GLY B 97 N VAL B 62 SHEET 1 AA8 5 VAL B 130 CYS B 131 0 SHEET 2 AA8 5 THR B 140 ASN B 149 -1 O ILE B 141 N VAL B 130 SHEET 3 AA8 5 GLY B 61 GLN B 69 1 N VAL B 67 O ILE B 148 SHEET 4 AA8 5 CYS B 76 ARG B 84 -1 O VAL B 78 N PRO B 66 SHEET 5 AA8 5 GLU B 169 PRO B 174 -1 O ILE B 171 N LEU B 79 SHEET 1 AA9 3 TYR C 16 GLU C 25 0 SHEET 2 AA9 3 VAL C 29 MET C 37 -1 O LYS C 33 N GLU C 21 SHEET 3 AA9 3 THR C 43 ARG C 51 -1 O TRP C 46 N THR C 34 SHEET 1 AB1 6 ASP C 122 CYS C 126 0 SHEET 2 AB1 6 THR C 140 ASN C 149 -1 O THR C 145 N ALA C 124 SHEET 3 AB1 6 GLY C 61 GLN C 69 1 N GLN C 69 O ILE C 148 SHEET 4 AB1 6 CYS C 76 PHE C 83 -1 O CYS C 76 N LEU C 68 SHEET 5 AB1 6 TYR C 90 GLU C 93 -1 O GLU C 93 N VAL C 80 SHEET 6 AB1 6 LEU C 191 VAL C 193 1 O THR C 192 N ILE C 92 SHEET 1 AB2 4 VAL C 130 CYS C 131 0 SHEET 2 AB2 4 THR C 140 ASN C 149 -1 O ILE C 141 N VAL C 130 SHEET 3 AB2 4 GLY C 61 GLN C 69 1 N GLN C 69 O ILE C 148 SHEET 4 AB2 4 ALA C 96 LEU C 98 -1 O GLY C 97 N VAL C 62 SHEET 1 AB3 5 VAL C 130 CYS C 131 0 SHEET 2 AB3 5 THR C 140 ASN C 149 -1 O ILE C 141 N VAL C 130 SHEET 3 AB3 5 GLY C 61 GLN C 69 1 N GLN C 69 O ILE C 148 SHEET 4 AB3 5 CYS C 76 PHE C 83 -1 O CYS C 76 N LEU C 68 SHEET 5 AB3 5 GLU C 169 PRO C 174 -1 O ILE C 171 N LEU C 79 SHEET 1 AB4 3 TYR D 16 GLU D 25 0 SHEET 2 AB4 3 VAL D 29 MET D 37 -1 O THR D 35 N SER D 19 SHEET 3 AB4 3 THR D 43 ARG D 51 -1 O TRP D 46 N THR D 34 SHEET 1 AB5 6 ASP D 122 CYS D 126 0 SHEET 2 AB5 6 THR D 140 ASN D 149 -1 O THR D 145 N ALA D 124 SHEET 3 AB5 6 GLY D 61 GLN D 69 1 N GLN D 69 O ILE D 148 SHEET 4 AB5 6 CYS D 76 ARG D 84 -1 O CYS D 76 N LEU D 68 SHEET 5 AB5 6 GLY D 89 GLU D 93 -1 O GLU D 93 N VAL D 80 SHEET 6 AB5 6 THR D 192 VAL D 193 1 O THR D 192 N ILE D 92 SHEET 1 AB6 4 VAL D 130 CYS D 131 0 SHEET 2 AB6 4 THR D 140 ASN D 149 -1 O ILE D 141 N VAL D 130 SHEET 3 AB6 4 GLY D 61 GLN D 69 1 N GLN D 69 O ILE D 148 SHEET 4 AB6 4 ALA D 96 LEU D 98 -1 O GLY D 97 N VAL D 62 SHEET 1 AB7 5 VAL D 130 CYS D 131 0 SHEET 2 AB7 5 THR D 140 ASN D 149 -1 O ILE D 141 N VAL D 130 SHEET 3 AB7 5 GLY D 61 GLN D 69 1 N GLN D 69 O ILE D 148 SHEET 4 AB7 5 CYS D 76 ARG D 84 -1 O CYS D 76 N LEU D 68 SHEET 5 AB7 5 GLU D 169 PRO D 174 -1 O ILE D 171 N LEU D 79 LINK O ALA A 96 MG MG A 301 1555 1555 2.08 LINK OE2 GLU A 112 MG MG A 302 1555 1555 2.42 LINK OE2 GLU A 116 MG MG A 301 1555 1555 2.13 LINK OE2 GLU A 166 MG MG A 302 1555 1555 2.68 LINK MG MG A 301 O HOH A 411 1555 1555 2.07 LINK MG MG A 301 O HOH A 447 1555 1555 2.21 LINK MG MG A 301 O HOH A 462 1555 1555 2.09 LINK MG MG A 301 O HOH A 465 1555 1555 2.17 LINK MG MG A 302 O HOH A 420 1555 1555 2.00 LINK MG MG A 302 O HOH A 462 1555 1555 2.05 LINK O ALA B 96 MG MG B 303 1555 1555 1.93 LINK OE2 GLU B 116 MG MG B 303 1555 1555 2.12 LINK MG MG B 303 O HOH B 423 1555 1555 2.12 LINK MG MG B 303 O HOH B 431 1555 1555 2.13 LINK MG MG B 303 O HOH B 440 1555 1555 2.15 LINK MG MG B 303 O HOH B 442 1555 1555 2.16 LINK MG MG B 304 O HOH B 401 1555 1555 2.80 LINK MG MG B 304 O HOH B 442 1555 1555 2.82 LINK MG MG B 304 O HOH B 471 1555 1555 2.06 LINK O ALA C 96 MG MG C 302 1555 1555 3.00 LINK O ALA C 96 MG MG C 303 1555 1555 2.22 LINK OE2 GLU C 116 MG MG C 302 1555 1555 2.97 LINK OE2 GLU C 116 MG MG C 303 1555 1555 2.12 LINK MG MG C 302 O HOH C 403 1555 1555 2.67 LINK MG MG C 303 O HOH C 426 1555 1555 2.29 LINK MG MG C 303 O HOH C 435 1555 1555 1.95 LINK MG MG C 303 O HOH C 458 1555 1555 2.05 LINK O ALA D 96 MG MG D 301 1555 1555 2.20 LINK OE2 GLU D 112 MG MG D 302 1555 1555 2.47 LINK OE2 GLU D 116 MG MG D 301 1555 1555 2.07 LINK OE2 GLU D 116 MG MG D 302 1555 1555 2.89 LINK MG MG D 301 O HOH D 408 1555 1555 2.10 LINK MG MG D 301 O HOH D 418 1555 1555 2.01 LINK MG MG D 301 O HOH D 426 1555 1555 1.94 LINK MG MG D 301 O HOH D 447 1555 1555 2.70 LINK MG MG D 302 O HOH D 426 1555 1555 2.81 LINK MG MG D 302 O HOH D 447 1555 1555 1.86 SITE 1 AC1 7 ALA A 96 GLU A 116 MG A 302 HOH A 411 SITE 2 AC1 7 HOH A 447 HOH A 462 HOH A 465 SITE 1 AC2 6 GLU A 112 GLU A 116 GLU A 166 MG A 301 SITE 2 AC2 6 HOH A 420 HOH A 462 SITE 1 AC3 8 TRP A 28 VAL A 29 ARG A 51 HOH A 470 SITE 2 AC3 8 TRP B 46 GLU B 47 GLY B 135 LEU B 136 SITE 1 AC4 5 ARG A 51 MET A 132 CYS A 139 HOH A 406 SITE 2 AC4 5 ASP B 133 SITE 1 AC5 5 GLN B 69 ASN B 149 ASP B 151 HOH B 403 SITE 2 AC5 5 HOH B 409 SITE 1 AC6 6 ALA B 96 GLU B 116 HOH B 423 HOH B 431 SITE 2 AC6 6 HOH B 440 HOH B 442 SITE 1 AC7 5 GLU B 112 GLU B 166 HOH B 401 HOH B 442 SITE 2 AC7 5 HOH B 471 SITE 1 AC8 5 ASP A 133 ARG B 51 MET B 132 CYS B 139 SITE 2 AC8 5 HOH B 405 SITE 1 AC9 4 ASP C 122 GLU C 154 ASN C 155 HOH C 430 SITE 1 AD1 9 ALA C 96 GLU C 112 GLU C 116 GLU C 166 SITE 2 AD1 9 MG C 303 HOH C 403 HOH C 426 HOH C 453 SITE 3 AD1 9 HOH C 458 SITE 1 AD2 6 ALA C 96 GLU C 116 MG C 302 HOH C 426 SITE 2 AD2 6 HOH C 435 HOH C 458 SITE 1 AD3 7 TRP C 46 GLU C 47 GLY C 135 LEU C 136 SITE 2 AD3 7 TRP D 28 VAL D 29 ARG D 51 SITE 1 AD4 5 ARG C 51 MET C 132 CYS C 139 HOH C 452 SITE 2 AD4 5 ASP D 133 SITE 1 AD5 7 ALA D 96 GLU D 116 MG D 302 HOH D 408 SITE 2 AD5 7 HOH D 418 HOH D 426 HOH D 447 SITE 1 AD6 9 ALA D 96 GLY D 97 GLU D 112 GLU D 116 SITE 2 AD6 9 MG D 301 HOH D 417 HOH D 418 HOH D 426 SITE 3 AD6 9 HOH D 447 SITE 1 AD7 5 ASP C 133 ARG D 51 MET D 132 CYS D 139 SITE 2 AD7 5 HOH D 421 CRYST1 49.261 59.768 80.262 79.25 81.78 75.66 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020300 -0.005191 -0.002142 0.00000 SCALE2 0.000000 0.017270 -0.002754 0.00000 SCALE3 0.000000 0.000000 0.012748 0.00000