PDB Short entry for 5QJX HEADER HYDROLASE 31-OCT-18 5QJX TITLE PANDDA ANALYSIS GROUP DEPOSITION OF MODELS WITH MODELLED EVENTS (E.G. TITLE 2 BOUND LIGANDS) -- CRYSTAL STRUCTURE OF NUDT5 IN COMPLEX WITH TITLE 3 Z2856434778 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-SUGAR PYROPHOSPHATASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 8-OXO-DGDP PHOSPHATASE,NUCLEAR ATP-SYNTHESIS PROTEIN NUDIX5, COMPND 5 NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 5,HNUDT5,YSA1H; COMPND 6 EC: 3.6.1.13,3.6.1.58,2.7.7.96; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUDT5, NUDIX5, HSPC115; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SGC - DIAMOND I04-1 FRAGMENT SCREENING, PANDDA, XCHEMEXPLORER, NUDT5, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.DUBIANOK,P.COLLINS,T.KROJER,N.WRIGHT,C.STRAIN-DAMERELL,N.BURGESS- AUTHOR 2 BROWN,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS,K.HUBER,F.VON DELFT REVDAT 2 06-MAR-24 5QJX 1 LINK REVDAT 1 19-DEC-18 5QJX 0 JRNL AUTH Y.DUBIANOK,P.COLLINS,T.KROJER,N.WRIGHT,C.STRAIN-DAMERELL, JRNL AUTH 2 N.BURGESS-BROWN,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS,K.HUBER, JRNL AUTH 3 F.VON DELFT JRNL TITL PANDDA ANALYSIS GROUP DEPOSITION OF MODELS WITH MODELLED JRNL TITL 2 EVENTS (E.G. BOUND LIGANDS) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 82072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4310 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6070 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.3670 REMARK 3 BIN FREE R VALUE SET COUNT : 305 REMARK 3 BIN FREE R VALUE : 0.3790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5713 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 226 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.41000 REMARK 3 B22 (A**2) : -0.62000 REMARK 3 B33 (A**2) : -1.58000 REMARK 3 B12 (A**2) : 0.40000 REMARK 3 B13 (A**2) : 1.83000 REMARK 3 B23 (A**2) : 1.61000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.880 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6071 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5422 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8159 ; 1.890 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12542 ; 1.030 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 784 ; 7.085 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 236 ;37.486 ;24.661 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 904 ;14.232 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;15.859 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 960 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6824 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1116 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3183 ; 3.630 ; 3.846 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3177 ; 3.631 ; 3.841 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3916 ; 4.875 ; 5.735 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5QJX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1001402042. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86383 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 57.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.62300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 6GRU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 33 % PEG4K, 0.2 MGCL2 AND 0.1 M TRIS, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 GLU A 5 REMARK 465 PRO A 6 REMARK 465 THR A 7 REMARK 465 GLU A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 GLN A 11 REMARK 465 ASN A 12 REMARK 465 GLY A 13 REMARK 465 ASN A 208 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 GLU B 5 REMARK 465 PRO B 6 REMARK 465 THR B 7 REMARK 465 GLU B 8 REMARK 465 SER B 9 REMARK 465 SER B 10 REMARK 465 GLN B 11 REMARK 465 ASN B 12 REMARK 465 GLY B 13 REMARK 465 GLU B 56 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 SER C 3 REMARK 465 GLN C 4 REMARK 465 GLU C 5 REMARK 465 PRO C 6 REMARK 465 THR C 7 REMARK 465 GLU C 8 REMARK 465 SER C 9 REMARK 465 SER C 10 REMARK 465 GLN C 11 REMARK 465 ASN C 12 REMARK 465 GLY C 13 REMARK 465 LYS C 14 REMARK 465 GLU C 56 REMARK 465 ASN C 208 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 GLU D 2 REMARK 465 SER D 3 REMARK 465 GLN D 4 REMARK 465 GLU D 5 REMARK 465 PRO D 6 REMARK 465 THR D 7 REMARK 465 GLU D 8 REMARK 465 SER D 9 REMARK 465 SER D 10 REMARK 465 GLN D 11 REMARK 465 ASN D 12 REMARK 465 GLY D 13 REMARK 465 ARG D 54 REMARK 465 LYS D 55 REMARK 465 GLU D 56 REMARK 465 GLN D 57 REMARK 465 THR D 58 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 GLN A 57 CG CD OE1 NE2 REMARK 470 ASP A 101 CG OD1 OD2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 161 CG CD CE NZ REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 GLU A 189 CG CD OE1 OE2 REMARK 470 HIS A 190 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 27 CG CD CE NZ REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 GLN B 57 CG CD OE1 NE2 REMARK 470 THR B 58 OG1 CG2 REMARK 470 ASP B 101 CG OD1 OD2 REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 ARG B 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 LYS B 161 CG CD CE NZ REMARK 470 GLN B 180 CG CD OE1 NE2 REMARK 470 ILE C 17 CG1 CG2 CD1 REMARK 470 GLU C 20 CG CD OE1 OE2 REMARK 470 GLU C 21 CG CD OE1 OE2 REMARK 470 ILE C 23 CG1 CG2 CD1 REMARK 470 SER C 24 OG REMARK 470 GLU C 25 CG CD OE1 OE2 REMARK 470 LYS C 27 CG CD CE NZ REMARK 470 LYS C 30 CG CD CE NZ REMARK 470 LYS C 33 CG CD CE NZ REMARK 470 THR C 34 OG1 CG2 REMARK 470 MET C 37 CG SD CE REMARK 470 PRO C 39 CG CD REMARK 470 LYS C 42 CG CD CE NZ REMARK 470 GLU C 47 CG CD OE1 OE2 REMARK 470 LYS C 50 CG CD CE NZ REMARK 470 ARG C 54 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 55 CG CD CE NZ REMARK 470 GLN C 57 CG CD OE1 NE2 REMARK 470 THR C 58 OG1 CG2 REMARK 470 ARG C 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 159 CG CD CE NZ REMARK 470 LYS C 161 CG CD CE NZ REMARK 470 GLN C 180 CG CD OE1 NE2 REMARK 470 GLU C 188 CG CD OE1 OE2 REMARK 470 GLU D 20 CG CD OE1 OE2 REMARK 470 GLU D 25 CG CD OE1 OE2 REMARK 470 LYS D 27 CG CD CE NZ REMARK 470 TRP D 28 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 28 CZ3 CH2 REMARK 470 VAL D 29 CG1 CG2 REMARK 470 LYS D 30 CG CD CE NZ REMARK 470 LYS D 33 CG CD CE NZ REMARK 470 ARG D 51 CG CD NE CZ NH1 NH2 REMARK 470 THR D 53 OG1 CG2 REMARK 470 LYS D 81 CG CD CE NZ REMARK 470 ASP D 101 CG OD1 OD2 REMARK 470 GLU D 114 CG CD OE1 OE2 REMARK 470 LYS D 120 CG CD CE NZ REMARK 470 ASP D 122 CG OD1 OD2 REMARK 470 ARG D 157 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 159 CG CD CE NZ REMARK 470 ASP D 164 CG OD1 OD2 REMARK 470 GLU D 169 CG CD OE1 OE2 REMARK 470 GLN D 180 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 462 O HOH B 470 2.00 REMARK 500 O HOH C 444 O HOH D 423 2.04 REMARK 500 NE ARG B 196 O HOH B 401 2.13 REMARK 500 OE1 GLU C 125 O HOH C 401 2.16 REMARK 500 O GLY D 150 O HOH D 401 2.17 REMARK 500 O HOH A 456 O HOH B 469 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 70 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 111 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP B 194 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 196 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 196 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP C 194 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG C 196 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG D 196 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG D 196 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 55 -109.46 -105.25 REMARK 500 ASP A 133 77.05 -165.32 REMARK 500 LYS A 161 70.99 -111.86 REMARK 500 THR B 40 23.82 -77.82 REMARK 500 ASP B 133 87.62 -154.58 REMARK 500 ARG B 157 68.57 -117.72 REMARK 500 HIS B 190 56.09 36.72 REMARK 500 SER C 24 118.54 -173.82 REMARK 500 ASP C 133 75.61 -162.26 REMARK 500 ARG C 157 75.82 -114.09 REMARK 500 ASP C 177 34.47 -146.38 REMARK 500 ASP D 133 80.29 -155.43 REMARK 500 HIS D 190 76.19 -14.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 96 O REMARK 620 2 GLU A 116 OE2 89.5 REMARK 620 3 HOH A 423 O 97.3 80.0 REMARK 620 4 HOH A 424 O 167.9 87.6 93.8 REMARK 620 5 HOH A 440 O 93.6 173.0 93.4 90.6 REMARK 620 6 HOH A 446 O 88.6 91.8 169.8 79.7 94.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 116 OE2 REMARK 620 2 GLU A 166 OE2 160.7 REMARK 620 3 HOH A 413 O 106.9 88.3 REMARK 620 4 HOH A 446 O 80.8 101.6 121.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 96 O REMARK 620 2 GLU B 116 OE2 78.0 REMARK 620 3 HOH B 403 O 166.2 97.1 REMARK 620 4 HOH B 416 O 94.7 77.8 96.9 REMARK 620 5 HOH B 435 O 73.1 93.0 94.5 166.1 REMARK 620 6 HOH B 456 O 87.1 164.3 98.6 98.7 87.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 112 OE2 REMARK 620 2 GLU B 116 OE2 76.7 REMARK 620 3 GLU B 166 OE2 151.0 85.2 REMARK 620 4 HOH B 406 O 73.9 114.7 93.9 REMARK 620 5 HOH B 432 O 94.9 157.3 109.7 82.1 REMARK 620 6 HOH B 435 O 95.2 84.1 105.5 154.3 75.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA C 96 O REMARK 620 2 GLU C 112 OE2 68.2 REMARK 620 3 GLU C 166 OE2 126.7 102.5 REMARK 620 4 HOH C 415 O 131.9 64.7 73.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA C 96 O REMARK 620 2 GLU C 116 OE2 73.0 REMARK 620 3 HOH C 409 O 158.9 96.8 REMARK 620 4 HOH C 411 O 101.6 71.2 92.2 REMARK 620 5 HOH C 448 O 95.7 168.7 93.6 113.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA D 96 O REMARK 620 2 GLU D 116 OE2 86.1 REMARK 620 3 HOH D 402 O 93.5 63.3 REMARK 620 4 HOH D 418 O 93.9 167.3 104.1 REMARK 620 5 HOH D 421 O 92.1 94.3 156.4 98.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 112 OE2 REMARK 620 2 GLU D 116 OE2 73.1 REMARK 620 3 HOH D 403 O 70.8 100.9 REMARK 620 4 HOH D 419 O 72.2 145.2 69.8 REMARK 620 5 HOH D 421 O 95.0 84.0 162.5 96.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K2P B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 302 DBREF 5QJX A 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 DBREF 5QJX B 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 DBREF 5QJX C 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 DBREF 5QJX D 1 208 UNP Q9UKK9 NUDT5_HUMAN 1 208 SEQADV 5QJX SER A 0 UNP Q9UKK9 EXPRESSION TAG SEQADV 5QJX SER B 0 UNP Q9UKK9 EXPRESSION TAG SEQADV 5QJX SER C 0 UNP Q9UKK9 EXPRESSION TAG SEQADV 5QJX SER D 0 UNP Q9UKK9 EXPRESSION TAG SEQRES 1 A 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 A 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 A 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 A 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 A 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 A 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 A 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 A 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 A 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 A 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 A 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 A 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 A 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 A 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 A 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 A 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 A 209 ASN SEQRES 1 B 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 B 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 B 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 B 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 B 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 B 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 B 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 B 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 B 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 B 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 B 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 B 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 B 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 B 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 B 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 B 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 B 209 ASN SEQRES 1 C 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 C 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 C 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 C 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 C 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 C 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 C 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 C 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 C 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 C 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 C 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 C 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 C 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 C 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 C 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 C 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 C 209 ASN SEQRES 1 D 209 SER MET GLU SER GLN GLU PRO THR GLU SER SER GLN ASN SEQRES 2 D 209 GLY LYS GLN TYR ILE ILE SER GLU GLU LEU ILE SER GLU SEQRES 3 D 209 GLY LYS TRP VAL LYS LEU GLU LYS THR THR TYR MET ASP SEQRES 4 D 209 PRO THR GLY LYS THR ARG THR TRP GLU SER VAL LYS ARG SEQRES 5 D 209 THR THR ARG LYS GLU GLN THR ALA ASP GLY VAL ALA VAL SEQRES 6 D 209 ILE PRO VAL LEU GLN ARG THR LEU HIS TYR GLU CYS ILE SEQRES 7 D 209 VAL LEU VAL LYS GLN PHE ARG PRO PRO MET GLY GLY TYR SEQRES 8 D 209 CYS ILE GLU PHE PRO ALA GLY LEU ILE ASP ASP GLY GLU SEQRES 9 D 209 THR PRO GLU ALA ALA ALA LEU ARG GLU LEU GLU GLU GLU SEQRES 10 D 209 THR GLY TYR LYS GLY ASP ILE ALA GLU CYS SER PRO ALA SEQRES 11 D 209 VAL CYS MET ASP PRO GLY LEU SER ASN CYS THR ILE HIS SEQRES 12 D 209 ILE VAL THR VAL THR ILE ASN GLY ASP ASP ALA GLU ASN SEQRES 13 D 209 ALA ARG PRO LYS PRO LYS PRO GLY ASP GLY GLU PHE VAL SEQRES 14 D 209 GLU VAL ILE SER LEU PRO LYS ASN ASP LEU LEU GLN ARG SEQRES 15 D 209 LEU ASP ALA LEU VAL ALA GLU GLU HIS LEU THR VAL ASP SEQRES 16 D 209 ALA ARG VAL TYR SER TYR ALA LEU ALA LEU LYS HIS ALA SEQRES 17 D 209 ASN HET MG A 301 1 HET MG A 302 1 HET CL A 303 1 HET EDO A 304 4 HET EDO B 301 4 HET MG B 302 1 HET MG B 303 1 HET K2P B 304 14 HET EDO C 301 4 HET MG C 302 1 HET MG C 303 1 HET MG D 301 1 HET MG D 302 1 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM K2P 2-(TRIFLUOROMETHOXY)BENZOIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 5 MG 8(MG 2+) FORMUL 7 CL CL 1- FORMUL 8 EDO 3(C2 H6 O2) FORMUL 12 K2P C8 H5 F3 O3 FORMUL 18 HOH *226(H2 O) HELIX 1 AA1 PRO A 85 GLY A 88 5 4 HELIX 2 AA2 THR A 104 GLY A 118 1 15 HELIX 3 AA3 ASP A 152 ALA A 156 5 5 HELIX 4 AA4 ASP A 177 HIS A 190 1 14 HELIX 5 AA5 ASP A 194 ALA A 207 1 14 HELIX 6 AA6 THR B 104 GLY B 118 1 15 HELIX 7 AA7 ASP B 152 ALA B 156 5 5 HELIX 8 AA8 ASP B 177 HIS B 190 1 14 HELIX 9 AA9 ASP B 194 ALA B 207 1 14 HELIX 10 AB1 THR C 104 GLY C 118 1 15 HELIX 11 AB2 ASP C 152 ALA C 156 5 5 HELIX 12 AB3 ASP C 177 GLU C 189 1 13 HELIX 13 AB4 ALA C 195 ALA C 207 1 13 HELIX 14 AB5 THR D 104 GLY D 118 1 15 HELIX 15 AB6 ASP D 152 ALA D 156 5 5 HELIX 16 AB7 ASP D 177 GLU D 189 1 13 HELIX 17 AB8 ASP D 194 ALA D 207 1 14 SHEET 1 AA1 3 TYR A 16 GLU A 25 0 SHEET 2 AA1 3 VAL A 29 MET A 37 -1 O THR A 35 N SER A 19 SHEET 3 AA1 3 THR A 43 ARG A 51 -1 O TRP A 46 N THR A 34 SHEET 1 AA2 4 ALA A 96 LEU A 98 0 SHEET 2 AA2 4 GLY A 61 GLN A 69 -1 N VAL A 62 O GLY A 97 SHEET 3 AA2 4 CYS A 76 ARG A 84 -1 O CYS A 76 N LEU A 68 SHEET 4 AA2 4 GLU A 169 PRO A 174 -1 O ILE A 171 N LEU A 79 SHEET 1 AA3 6 ASP A 122 CYS A 131 0 SHEET 2 AA3 6 THR A 140 ASN A 149 -1 O ILE A 141 N VAL A 130 SHEET 3 AA3 6 GLY A 61 GLN A 69 1 N GLN A 69 O ILE A 148 SHEET 4 AA3 6 CYS A 76 ARG A 84 -1 O CYS A 76 N LEU A 68 SHEET 5 AA3 6 GLY A 89 GLU A 93 -1 O GLY A 89 N ARG A 84 SHEET 6 AA3 6 THR A 192 VAL A 193 1 O THR A 192 N ILE A 92 SHEET 1 AA4 3 TYR B 16 GLU B 25 0 SHEET 2 AA4 3 VAL B 29 MET B 37 -1 O THR B 35 N SER B 19 SHEET 3 AA4 3 THR B 43 ARG B 51 -1 O TRP B 46 N THR B 34 SHEET 1 AA5 6 ASP B 122 CYS B 126 0 SHEET 2 AA5 6 THR B 140 ASN B 149 -1 O THR B 147 N ASP B 122 SHEET 3 AA5 6 GLY B 61 GLN B 69 1 N GLN B 69 O ILE B 148 SHEET 4 AA5 6 CYS B 76 ARG B 84 -1 O VAL B 78 N PRO B 66 SHEET 5 AA5 6 GLY B 89 GLU B 93 -1 O GLU B 93 N VAL B 80 SHEET 6 AA5 6 THR B 192 VAL B 193 1 O THR B 192 N ILE B 92 SHEET 1 AA6 4 VAL B 130 CYS B 131 0 SHEET 2 AA6 4 THR B 140 ASN B 149 -1 O ILE B 141 N VAL B 130 SHEET 3 AA6 4 GLY B 61 GLN B 69 1 N GLN B 69 O ILE B 148 SHEET 4 AA6 4 ALA B 96 LEU B 98 -1 O GLY B 97 N VAL B 62 SHEET 1 AA7 5 VAL B 130 CYS B 131 0 SHEET 2 AA7 5 THR B 140 ASN B 149 -1 O ILE B 141 N VAL B 130 SHEET 3 AA7 5 GLY B 61 GLN B 69 1 N GLN B 69 O ILE B 148 SHEET 4 AA7 5 CYS B 76 ARG B 84 -1 O VAL B 78 N PRO B 66 SHEET 5 AA7 5 GLU B 169 PRO B 174 -1 O ILE B 171 N LEU B 79 SHEET 1 AA8 3 TYR C 16 GLU C 25 0 SHEET 2 AA8 3 VAL C 29 MET C 37 -1 O LYS C 33 N GLU C 21 SHEET 3 AA8 3 THR C 43 ARG C 51 -1 O TRP C 46 N THR C 34 SHEET 1 AA912 GLY C 121 CYS C 126 0 SHEET 2 AA912 THR C 140 ASN C 149 -1 O THR C 145 N ALA C 124 SHEET 3 AA912 GLY C 61 GLN C 69 1 N GLN C 69 O ILE C 148 SHEET 4 AA912 CYS C 76 ARG C 84 -1 O CYS C 76 N LEU C 68 SHEET 5 AA912 GLY C 89 GLU C 93 -1 O GLY C 89 N ARG C 84 SHEET 6 AA912 LEU C 191 ASP C 194 1 O ASP C 194 N ILE C 92 SHEET 7 AA912 VAL D 130 CYS D 131 1 O CYS D 131 N VAL C 193 SHEET 8 AA912 THR D 140 ASN D 149 -1 O ILE D 141 N VAL D 130 SHEET 9 AA912 GLY D 61 GLN D 69 1 N ALA D 63 O VAL D 144 SHEET 10 AA912 CYS D 76 PHE D 83 -1 O CYS D 76 N LEU D 68 SHEET 11 AA912 TYR D 90 GLU D 93 -1 O GLU D 93 N VAL D 80 SHEET 12 AA912 THR D 192 VAL D 193 1 O THR D 192 N ILE D 92 SHEET 1 AB1 4 VAL C 130 CYS C 131 0 SHEET 2 AB1 4 THR C 140 ASN C 149 -1 O ILE C 141 N VAL C 130 SHEET 3 AB1 4 GLY C 61 GLN C 69 1 N GLN C 69 O ILE C 148 SHEET 4 AB1 4 ALA C 96 LEU C 98 -1 O GLY C 97 N VAL C 62 SHEET 1 AB2 5 VAL C 130 CYS C 131 0 SHEET 2 AB2 5 THR C 140 ASN C 149 -1 O ILE C 141 N VAL C 130 SHEET 3 AB2 5 GLY C 61 GLN C 69 1 N GLN C 69 O ILE C 148 SHEET 4 AB2 5 CYS C 76 ARG C 84 -1 O CYS C 76 N LEU C 68 SHEET 5 AB2 5 GLU C 169 PRO C 174 -1 O LEU C 173 N ILE C 77 SHEET 1 AB3 4 ASP D 122 CYS D 126 0 SHEET 2 AB3 4 THR D 140 ASN D 149 -1 O THR D 145 N ALA D 124 SHEET 3 AB3 4 GLY D 61 GLN D 69 1 N ALA D 63 O VAL D 144 SHEET 4 AB3 4 ALA D 96 LEU D 98 -1 O GLY D 97 N VAL D 62 SHEET 1 AB4 4 ALA D 96 LEU D 98 0 SHEET 2 AB4 4 GLY D 61 GLN D 69 -1 N VAL D 62 O GLY D 97 SHEET 3 AB4 4 CYS D 76 PHE D 83 -1 O CYS D 76 N LEU D 68 SHEET 4 AB4 4 GLU D 169 PRO D 174 -1 O LEU D 173 N ILE D 77 SHEET 1 AB5 3 TYR D 16 GLU D 25 0 SHEET 2 AB5 3 VAL D 29 MET D 37 -1 O LEU D 31 N SER D 24 SHEET 3 AB5 3 THR D 43 ARG D 51 -1 O SER D 48 N GLU D 32 LINK O ALA A 96 MG MG A 301 1555 1555 2.09 LINK OE2 GLU A 116 MG MG A 301 1555 1555 2.23 LINK OE2 GLU A 116 MG MG A 302 1555 1555 2.64 LINK OE2 GLU A 166 MG MG A 302 1555 1555 2.87 LINK MG MG A 301 O HOH A 423 1555 1555 2.02 LINK MG MG A 301 O HOH A 424 1555 1555 2.60 LINK MG MG A 301 O HOH A 440 1555 1555 2.33 LINK MG MG A 301 O HOH A 446 1555 1555 2.15 LINK MG MG A 302 O HOH A 413 1555 1555 2.17 LINK MG MG A 302 O HOH A 446 1555 1555 2.18 LINK O ALA B 96 MG MG B 302 1555 1555 2.31 LINK OE2 GLU B 112 MG MG B 303 1555 1555 2.43 LINK OE2 GLU B 116 MG MG B 302 1555 1555 2.27 LINK OE2 GLU B 116 MG MG B 303 1555 1555 2.69 LINK OE2 GLU B 166 MG MG B 303 1555 1555 2.48 LINK MG MG B 302 O HOH B 403 1555 1555 2.50 LINK MG MG B 302 O HOH B 416 1555 1555 1.94 LINK MG MG B 302 O HOH B 435 1555 1555 2.37 LINK MG MG B 302 O HOH B 456 1555 1555 2.49 LINK MG MG B 303 O HOH B 406 1555 1555 2.02 LINK MG MG B 303 O HOH B 432 1555 1555 2.83 LINK MG MG B 303 O HOH B 435 1555 1555 2.32 LINK O ALA C 96 MG MG C 302 1555 1555 2.94 LINK O ALA C 96 MG MG C 303 1555 1555 2.23 LINK OE2 GLU C 112 MG MG C 302 1555 1555 2.83 LINK OE2 GLU C 116 MG MG C 303 1555 1555 2.57 LINK OE2 GLU C 166 MG MG C 302 1555 1555 2.72 LINK MG MG C 302 O HOH C 415 1555 1555 2.38 LINK MG MG C 303 O HOH C 409 1555 1555 2.55 LINK MG MG C 303 O HOH C 411 1555 1555 1.84 LINK MG MG C 303 O HOH C 448 1555 1555 2.16 LINK O ALA D 96 MG MG D 301 1555 1555 2.28 LINK OE2 GLU D 112 MG MG D 302 1555 1555 2.56 LINK OE2 GLU D 116 MG MG D 301 1555 1555 2.42 LINK OE2 GLU D 116 MG MG D 302 1555 1555 2.98 LINK MG MG D 301 O HOH D 402 1555 1555 2.26 LINK MG MG D 301 O HOH D 418 1555 1555 2.07 LINK MG MG D 301 O HOH D 421 1555 1555 2.19 LINK MG MG D 302 O HOH D 403 1555 1555 2.56 LINK MG MG D 302 O HOH D 419 1555 1555 2.83 LINK MG MG D 302 O HOH D 421 1555 1555 1.94 SITE 1 AC1 7 ALA A 96 GLU A 116 MG A 302 HOH A 423 SITE 2 AC1 7 HOH A 424 HOH A 440 HOH A 446 SITE 1 AC2 6 GLU A 112 GLU A 116 GLU A 166 MG A 301 SITE 2 AC2 6 HOH A 413 HOH A 446 SITE 1 AC3 1 THR B 145 SITE 1 AC4 4 ARG A 51 MET A 132 CYS A 139 ASP B 133 SITE 1 AC5 5 GLN B 69 ASN B 149 ASP B 151 HOH B 404 SITE 2 AC5 5 HOH B 428 SITE 1 AC6 7 ALA B 96 GLU B 116 MG B 303 HOH B 403 SITE 2 AC6 7 HOH B 416 HOH B 435 HOH B 456 SITE 1 AC7 7 GLU B 112 GLU B 116 GLU B 166 MG B 302 SITE 2 AC7 7 HOH B 406 HOH B 432 HOH B 435 SITE 1 AC8 9 LYS A 14 GLN A 15 PRO A 39 LYS B 81 SITE 2 AC8 9 TYR B 90 PHE B 167 VAL B 168 GLU B 169 SITE 3 AC8 9 HOH B 419 SITE 1 AC9 6 ASP C 122 ASN C 149 ASP C 152 GLU C 154 SITE 2 AC9 6 ASN C 155 HOH C 419 SITE 1 AD1 7 ALA C 96 GLY C 97 GLU C 112 GLU C 116 SITE 2 AD1 7 GLU C 166 MG C 303 HOH C 415 SITE 1 AD2 6 ALA C 96 GLU C 116 MG C 302 HOH C 409 SITE 2 AD2 6 HOH C 411 HOH C 448 SITE 1 AD3 6 ALA D 96 GLU D 116 MG D 302 HOH D 402 SITE 2 AD3 6 HOH D 418 HOH D 421 SITE 1 AD4 6 GLU D 112 GLU D 116 MG D 301 HOH D 403 SITE 2 AD4 6 HOH D 419 HOH D 421 CRYST1 48.520 59.520 80.620 79.68 82.36 76.36 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020610 -0.005001 -0.002021 0.00000 SCALE2 0.000000 0.017289 -0.002685 0.00000 SCALE3 0.000000 0.000000 0.012665 0.00000