PDB Short entry for 5T14 HEADER TRANSFERASE/DNA 17-AUG-16 5T14 TITLE DNA POLYMERASE KAPPA EXTENDING BEYOND A BULKY MAJOR BENZO[A]PYRENE TITLE 2 ADDUCT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE KAPPA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DINB PROTEIN,DINP; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA; COMPND 9 CHAIN: C, P; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA; COMPND 13 CHAIN: D, T; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLK, DINB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 11 ORGANISM_TAXID: 32644; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 15 ORGANISM_TAXID: 32644 KEYWDS DNA REPAIR DNA REPLICATION BENZOPYRENE TERNARY COMPLEX, TRANSFERASE- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.K.JHA,H.LING REVDAT 4 06-MAR-24 5T14 1 LINK REVDAT 3 08-JAN-20 5T14 1 REMARK REVDAT 2 18-JAN-17 5T14 1 JRNL REVDAT 1 21-DEC-16 5T14 0 JRNL AUTH V.JHA,H.LING JRNL TITL STRUCTURAL BASIS OF ACCURATE REPLICATION BEYOND A BULKY JRNL TITL 2 MAJOR BENZO[A]PYRENE ADDUCT BY HUMAN DNA POLYMERASE KAPPA. JRNL REF DNA REPAIR (AMST.) V. 49 43 2017 JRNL REFN ISSN 1568-7856 JRNL PMID 27894903 JRNL DOI 10.1016/J.DNAREP.2016.11.001 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 27673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1130 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1993 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3860 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.3790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6682 REMARK 3 NUCLEIC ACID ATOMS : 936 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 12.80000 REMARK 3 B22 (A**2) : -8.60000 REMARK 3 B33 (A**2) : -4.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.429 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.408 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.922 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7930 ; 0.008 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 7144 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10880 ; 1.314 ; 1.867 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16405 ; 1.033 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 857 ; 5.905 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 292 ;39.070 ;23.938 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1233 ;16.738 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;17.744 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1211 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8219 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1770 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3443 ; 3.481 ; 8.002 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3442 ; 3.479 ; 8.002 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4295 ; 5.786 ;11.995 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4296 ; 5.785 ;11.996 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4487 ; 3.415 ; 8.061 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4488 ; 3.415 ; 8.060 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6588 ; 5.767 ;11.973 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9023 ; 8.843 ;64.350 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9017 ; 8.840 ;64.359 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 31 A 517 4 REMARK 3 1 B 31 B 517 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 6506 ; 0.380 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 6506 ; 8.610 ; 2.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : C P REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 5 C 13 4 REMARK 3 1 P 5 P 13 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 C (A): 285 ; 0.200 ; 0.500 REMARK 3 MEDIUM THERMAL 2 C (A**2): 285 ; 4.910 ; 2.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : D T REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 D 2 D 14 4 REMARK 3 1 T 2 T 14 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 D (A): 439 ; 0.250 ; 0.500 REMARK 3 MEDIUM THERMAL 3 D (A**2): 439 ; 3.820 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5T14 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223443. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28865 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, AMMONIUM NITRATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.62500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.73000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.41000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.73000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.62500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.41000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 LYS A 5 REMARK 465 GLU A 6 REMARK 465 LYS A 7 REMARK 465 CYS A 8 REMARK 465 ASP A 9 REMARK 465 SER A 10 REMARK 465 TYR A 11 REMARK 465 LYS A 12 REMARK 465 ASP A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 15 REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 ARG A 18 REMARK 465 MET A 19 REMARK 465 GLY A 20 REMARK 465 LEU A 21 REMARK 465 ASN A 22 REMARK 465 ASP A 23 REMARK 465 ASN A 24 REMARK 465 LYS A 25 REMARK 465 ALA A 26 REMARK 465 GLY A 27 REMARK 465 MET A 28 REMARK 465 GLU A 29 REMARK 465 GLY A 30 REMARK 465 MET A 225 REMARK 465 GLY A 226 REMARK 465 SER A 227 REMARK 465 SER A 228 REMARK 465 VAL A 229 REMARK 465 GLU A 230 REMARK 465 ASN A 231 REMARK 465 ASP A 232 REMARK 465 ASN A 233 REMARK 465 PRO A 234 REMARK 465 GLY A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 VAL A 238 REMARK 465 ASN A 239 REMARK 465 LYS A 240 REMARK 465 LEU A 241 REMARK 465 SER A 242 REMARK 465 GLU A 243 REMARK 465 HIS A 244 REMARK 465 GLU A 245 REMARK 465 ARG A 246 REMARK 465 SER A 247 REMARK 465 ILE A 248 REMARK 465 SER A 249 REMARK 465 PRO A 250 REMARK 465 LEU A 251 REMARK 465 LEU A 252 REMARK 465 PHE A 253 REMARK 465 GLU A 254 REMARK 465 GLU A 255 REMARK 465 SER A 256 REMARK 465 PRO A 257 REMARK 465 SER A 258 REMARK 465 ASP A 259 REMARK 465 VAL A 260 REMARK 465 GLN A 261 REMARK 465 PRO A 262 REMARK 465 PRO A 263 REMARK 465 GLY A 264 REMARK 465 ASP A 265 REMARK 465 PRO A 266 REMARK 465 PHE A 267 REMARK 465 GLN A 268 REMARK 465 VAL A 269 REMARK 465 ASN A 270 REMARK 465 PHE A 271 REMARK 465 GLU A 272 REMARK 465 GLU A 273 REMARK 465 GLN A 274 REMARK 465 ASN A 275 REMARK 465 ASN A 276 REMARK 465 PRO A 277 REMARK 465 GLN A 278 REMARK 465 ILE A 279 REMARK 465 LEU A 280 REMARK 465 GLN A 281 REMARK 465 GLU A 519 REMARK 465 GLU A 520 REMARK 465 ASP A 521 REMARK 465 ARG A 522 REMARK 465 LYS A 523 REMARK 465 HIS A 524 REMARK 465 GLN A 525 REMARK 465 GLN A 526 REMARK 465 ARG A 527 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 SER B 3 REMARK 465 THR B 4 REMARK 465 LYS B 5 REMARK 465 GLU B 6 REMARK 465 LYS B 7 REMARK 465 CYS B 8 REMARK 465 ASP B 9 REMARK 465 SER B 10 REMARK 465 TYR B 11 REMARK 465 LYS B 12 REMARK 465 ASP B 13 REMARK 465 ASP B 14 REMARK 465 LEU B 15 REMARK 465 LEU B 16 REMARK 465 LEU B 17 REMARK 465 ARG B 18 REMARK 465 MET B 19 REMARK 465 GLY B 20 REMARK 465 LEU B 21 REMARK 465 ASN B 22 REMARK 465 ASP B 23 REMARK 465 ASN B 24 REMARK 465 LYS B 25 REMARK 465 ALA B 26 REMARK 465 GLY B 27 REMARK 465 MET B 28 REMARK 465 GLU B 29 REMARK 465 GLY B 30 REMARK 465 MET B 225 REMARK 465 GLY B 226 REMARK 465 SER B 227 REMARK 465 SER B 228 REMARK 465 VAL B 229 REMARK 465 GLU B 230 REMARK 465 ASN B 231 REMARK 465 ASP B 232 REMARK 465 ASN B 233 REMARK 465 PRO B 234 REMARK 465 GLY B 235 REMARK 465 LYS B 236 REMARK 465 GLU B 237 REMARK 465 VAL B 238 REMARK 465 ASN B 239 REMARK 465 LYS B 240 REMARK 465 LEU B 241 REMARK 465 SER B 242 REMARK 465 GLU B 243 REMARK 465 HIS B 244 REMARK 465 GLU B 245 REMARK 465 ARG B 246 REMARK 465 SER B 247 REMARK 465 ILE B 248 REMARK 465 SER B 249 REMARK 465 PRO B 250 REMARK 465 LEU B 251 REMARK 465 LEU B 252 REMARK 465 PHE B 253 REMARK 465 GLU B 254 REMARK 465 GLU B 255 REMARK 465 SER B 256 REMARK 465 PRO B 257 REMARK 465 SER B 258 REMARK 465 ASP B 259 REMARK 465 VAL B 260 REMARK 465 GLN B 261 REMARK 465 PRO B 262 REMARK 465 PRO B 263 REMARK 465 GLY B 264 REMARK 465 ASP B 265 REMARK 465 PRO B 266 REMARK 465 PHE B 267 REMARK 465 GLN B 268 REMARK 465 VAL B 269 REMARK 465 ASN B 270 REMARK 465 PHE B 271 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLN B 274 REMARK 465 ASN B 275 REMARK 465 ASN B 276 REMARK 465 PRO B 277 REMARK 465 GLN B 278 REMARK 465 ILE B 279 REMARK 465 LEU B 280 REMARK 465 GLN B 281 REMARK 465 GLU B 519 REMARK 465 GLU B 520 REMARK 465 ASP B 521 REMARK 465 ARG B 522 REMARK 465 LYS B 523 REMARK 465 HIS B 524 REMARK 465 GLN B 525 REMARK 465 GLN B 526 REMARK 465 ARG B 527 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 31 CG CD1 CD2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 MET A 41 CG SD CE REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 GLU A 65 CG CD OE1 OE2 REMARK 470 GLN A 69 CG CD OE1 NE2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 GLN A 85 CG CD OE1 NE2 REMARK 470 GLN A 95 CG CD OE1 NE2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 470 ASP A 217 CG OD1 OD2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 ASN A 282 CG OD1 ND2 REMARK 470 ARG A 409 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 410 CG OD1 OD2 REMARK 470 GLU A 412 CG CD OE1 OE2 REMARK 470 SER A 475 OG REMARK 470 SER A 476 OG REMARK 470 LYS A 493 CG CD CE NZ REMARK 470 ASP A 499 CG OD1 OD2 REMARK 470 LEU B 31 CG CD1 CD2 REMARK 470 LYS B 33 CG CD CE NZ REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 470 LYS B 35 CG CD CE NZ REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 MET B 41 CG SD CE REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 GLN B 59 CG CD OE1 NE2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 GLN B 73 CG CD OE1 NE2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 LEU B 84 CG CD1 CD2 REMARK 470 ARG B 88 CG CD NE CZ NH1 NH2 REMARK 470 MET B 91 CG SD CE REMARK 470 GLU B 92 CG CD OE1 OE2 REMARK 470 GLN B 95 CG CD OE1 NE2 REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 ASP B 125 CG OD1 OD2 REMARK 470 ARG B 149 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 GLN B 163 CG CD OE1 NE2 REMARK 470 LYS B 206 CG CD CE NZ REMARK 470 ASP B 217 CG OD1 OD2 REMARK 470 PHE B 222 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 ASN B 282 CG OD1 ND2 REMARK 470 SER B 283 OG REMARK 470 VAL B 285 CG1 CG2 REMARK 470 LYS B 295 CD CE NZ REMARK 470 THR B 408 OG1 CG2 REMARK 470 ARG B 409 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 410 CG OD1 OD2 REMARK 470 GLU B 412 CG CD OE1 OE2 REMARK 470 LYS B 448 CE NZ REMARK 470 ARG B 450 CG CD NE CZ NH1 NH2 REMARK 470 SER B 476 OG REMARK 470 ASN B 518 CG OD1 ND2 REMARK 470 DC D 2 O5' REMARK 470 DC T 2 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 507 OP1 DA T 4 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OP2 DC C 5 O3' DG T 14 3555 1.92 REMARK 500 O3' DG D 14 OP1 DC P 5 3555 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 110 51.15 35.80 REMARK 500 CYS A 161 86.53 -169.78 REMARK 500 ASN A 191 42.88 -102.68 REMARK 500 SER A 196 -167.97 -166.27 REMARK 500 ASN A 327 45.45 -106.88 REMARK 500 LYS A 347 -52.53 -28.34 REMARK 500 ARG A 409 105.94 -24.17 REMARK 500 ASP A 410 117.22 -30.21 REMARK 500 ASN A 426 -18.86 -142.61 REMARK 500 ARG A 450 75.84 48.75 REMARK 500 SER A 479 -39.56 -162.12 REMARK 500 SER A 515 51.01 73.58 REMARK 500 ALA B 110 44.06 37.96 REMARK 500 ASP B 125 60.91 -116.42 REMARK 500 CYS B 161 91.64 -167.04 REMARK 500 ILE B 204 32.13 -86.29 REMARK 500 ALA B 314 165.41 179.00 REMARK 500 ASN B 327 43.49 -108.75 REMARK 500 PRO B 337 82.25 -68.19 REMARK 500 LYS B 347 -65.85 -29.70 REMARK 500 ARG B 409 135.66 -38.00 REMARK 500 PHE B 465 8.75 80.79 REMARK 500 SER B 479 -34.36 -166.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 107 OD1 REMARK 620 2 MET A 108 O 81.5 REMARK 620 3 ASP A 198 OD2 84.3 96.1 REMARK 620 4 DZ4 A 603 O3G 98.3 94.5 169.4 REMARK 620 5 DZ4 A 603 O1B 170.9 91.5 102.3 76.4 REMARK 620 6 DZ4 A 603 O1A 107.5 171.1 84.9 84.5 79.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 352 O REMARK 620 2 VAL A 354 O 89.5 REMARK 620 3 ILE A 357 O 91.3 94.6 REMARK 620 4 HOH A 721 O 88.3 102.0 163.3 REMARK 620 5 DA C 12 OP1 165.2 104.7 83.6 92.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 107 OD1 REMARK 620 2 MET B 108 O 89.6 REMARK 620 3 ASP B 198 OD2 67.1 89.8 REMARK 620 4 DZ4 B 604 O2B 166.2 99.4 102.3 REMARK 620 5 DZ4 B 604 O3G 108.1 92.4 174.7 82.2 REMARK 620 6 DZ4 B 604 O2A 89.8 172.2 82.8 79.8 95.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 352 O REMARK 620 2 VAL B 354 O 84.3 REMARK 620 3 ILE B 357 O 90.5 102.1 REMARK 620 4 DA P 12 OP1 167.5 108.1 84.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DZ4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DZ4 B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DT D 5 and VKJ D REMARK 800 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide VKJ D 6 and DT D REMARK 800 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DT T 5 and VKJ T REMARK 800 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide VKJ T 6 and DT T REMARK 800 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4U7C RELATED DB: PDB REMARK 900 RELATED ID: 4U6P RELATED DB: PDB DBREF 5T14 A 1 527 UNP Q9UBT6 POLK_HUMAN 1 527 DBREF 5T14 B 1 527 UNP Q9UBT6 POLK_HUMAN 1 527 DBREF 5T14 C 5 13 PDB 5T14 5T14 5 13 DBREF 5T14 D 2 14 PDB 5T14 5T14 2 14 DBREF 5T14 P 5 13 PDB 5T14 5T14 5 13 DBREF 5T14 T 2 14 PDB 5T14 5T14 2 14 SEQRES 1 A 527 MET ASP SER THR LYS GLU LYS CYS ASP SER TYR LYS ASP SEQRES 2 A 527 ASP LEU LEU LEU ARG MET GLY LEU ASN ASP ASN LYS ALA SEQRES 3 A 527 GLY MET GLU GLY LEU ASP LYS GLU LYS ILE ASN LYS ILE SEQRES 4 A 527 ILE MET GLU ALA THR LYS GLY SER ARG PHE TYR GLY ASN SEQRES 5 A 527 GLU LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG ILE GLU SEQRES 6 A 527 ASN MET MET GLN GLN LYS ALA GLN ILE THR SER GLN GLN SEQRES 7 A 527 LEU ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE ALA MET SEQRES 8 A 527 GLU LEU GLU GLN SER ARG ASN LEU SER ASN THR ILE VAL SEQRES 9 A 527 HIS ILE ASP MET ASP ALA PHE TYR ALA ALA VAL GLU MET SEQRES 10 A 527 ARG ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE ALA VAL SEQRES 11 A 527 GLY SER MET SER MET LEU SER THR SER ASN TYR HIS ALA SEQRES 12 A 527 ARG ARG PHE GLY VAL ARG ALA ALA MET PRO GLY PHE ILE SEQRES 13 A 527 ALA LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL PRO PRO SEQRES 14 A 527 ASN PHE ASP LYS TYR ARG ALA VAL SER LYS GLU VAL LYS SEQRES 15 A 527 GLU ILE LEU ALA ASP TYR ASP PRO ASN PHE MET ALA MET SEQRES 16 A 527 SER LEU ASP GLU ALA TYR LEU ASN ILE THR LYS HIS LEU SEQRES 17 A 527 GLU GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG ARG TYR SEQRES 18 A 527 PHE ILE LYS MET GLY SER SER VAL GLU ASN ASP ASN PRO SEQRES 19 A 527 GLY LYS GLU VAL ASN LYS LEU SER GLU HIS GLU ARG SER SEQRES 20 A 527 ILE SER PRO LEU LEU PHE GLU GLU SER PRO SER ASP VAL SEQRES 21 A 527 GLN PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE GLU GLU SEQRES 22 A 527 GLN ASN ASN PRO GLN ILE LEU GLN ASN SER VAL VAL PHE SEQRES 23 A 527 GLY THR SER ALA GLN GLU VAL VAL LYS GLU ILE ARG PHE SEQRES 24 A 527 ARG ILE GLU GLN LYS THR THR LEU THR ALA SER ALA GLY SEQRES 25 A 527 ILE ALA PRO ASN THR MET LEU ALA LYS VAL CYS SER ASP SEQRES 26 A 527 LYS ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU PRO ASN SEQRES 27 A 527 ARG GLN ALA VAL MET ASP PHE ILE LYS ASP LEU PRO ILE SEQRES 28 A 527 ARG LYS VAL SER GLY ILE GLY LYS VAL THR GLU LYS MET SEQRES 29 A 527 LEU LYS ALA LEU GLY ILE ILE THR CYS THR GLU LEU TYR SEQRES 30 A 527 GLN GLN ARG ALA LEU LEU SER LEU LEU PHE SER GLU THR SEQRES 31 A 527 SER TRP HIS TYR PHE LEU HIS ILE SER LEU GLY LEU GLY SEQRES 32 A 527 SER THR HIS LEU THR ARG ASP GLY GLU ARG LYS SER MET SEQRES 33 A 527 SER VAL GLU ARG THR PHE SER GLU ILE ASN LYS ALA GLU SEQRES 34 A 527 GLU GLN TYR SER LEU CYS GLN GLU LEU CYS SER GLU LEU SEQRES 35 A 527 ALA GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY ARG THR SEQRES 36 A 527 VAL THR ILE LYS LEU LYS ASN VAL ASN PHE GLU VAL LYS SEQRES 37 A 527 THR ARG ALA SER THR VAL SER SER VAL VAL SER THR ALA SEQRES 38 A 527 GLU GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU LYS THR SEQRES 39 A 527 GLU ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG LEU ARG SEQRES 40 A 527 LEU MET GLY VAL ARG ILE SER SER PHE PRO ASN GLU GLU SEQRES 41 A 527 ASP ARG LYS HIS GLN GLN ARG SEQRES 1 B 527 MET ASP SER THR LYS GLU LYS CYS ASP SER TYR LYS ASP SEQRES 2 B 527 ASP LEU LEU LEU ARG MET GLY LEU ASN ASP ASN LYS ALA SEQRES 3 B 527 GLY MET GLU GLY LEU ASP LYS GLU LYS ILE ASN LYS ILE SEQRES 4 B 527 ILE MET GLU ALA THR LYS GLY SER ARG PHE TYR GLY ASN SEQRES 5 B 527 GLU LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG ILE GLU SEQRES 6 B 527 ASN MET MET GLN GLN LYS ALA GLN ILE THR SER GLN GLN SEQRES 7 B 527 LEU ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE ALA MET SEQRES 8 B 527 GLU LEU GLU GLN SER ARG ASN LEU SER ASN THR ILE VAL SEQRES 9 B 527 HIS ILE ASP MET ASP ALA PHE TYR ALA ALA VAL GLU MET SEQRES 10 B 527 ARG ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE ALA VAL SEQRES 11 B 527 GLY SER MET SER MET LEU SER THR SER ASN TYR HIS ALA SEQRES 12 B 527 ARG ARG PHE GLY VAL ARG ALA ALA MET PRO GLY PHE ILE SEQRES 13 B 527 ALA LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL PRO PRO SEQRES 14 B 527 ASN PHE ASP LYS TYR ARG ALA VAL SER LYS GLU VAL LYS SEQRES 15 B 527 GLU ILE LEU ALA ASP TYR ASP PRO ASN PHE MET ALA MET SEQRES 16 B 527 SER LEU ASP GLU ALA TYR LEU ASN ILE THR LYS HIS LEU SEQRES 17 B 527 GLU GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG ARG TYR SEQRES 18 B 527 PHE ILE LYS MET GLY SER SER VAL GLU ASN ASP ASN PRO SEQRES 19 B 527 GLY LYS GLU VAL ASN LYS LEU SER GLU HIS GLU ARG SER SEQRES 20 B 527 ILE SER PRO LEU LEU PHE GLU GLU SER PRO SER ASP VAL SEQRES 21 B 527 GLN PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE GLU GLU SEQRES 22 B 527 GLN ASN ASN PRO GLN ILE LEU GLN ASN SER VAL VAL PHE SEQRES 23 B 527 GLY THR SER ALA GLN GLU VAL VAL LYS GLU ILE ARG PHE SEQRES 24 B 527 ARG ILE GLU GLN LYS THR THR LEU THR ALA SER ALA GLY SEQRES 25 B 527 ILE ALA PRO ASN THR MET LEU ALA LYS VAL CYS SER ASP SEQRES 26 B 527 LYS ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU PRO ASN SEQRES 27 B 527 ARG GLN ALA VAL MET ASP PHE ILE LYS ASP LEU PRO ILE SEQRES 28 B 527 ARG LYS VAL SER GLY ILE GLY LYS VAL THR GLU LYS MET SEQRES 29 B 527 LEU LYS ALA LEU GLY ILE ILE THR CYS THR GLU LEU TYR SEQRES 30 B 527 GLN GLN ARG ALA LEU LEU SER LEU LEU PHE SER GLU THR SEQRES 31 B 527 SER TRP HIS TYR PHE LEU HIS ILE SER LEU GLY LEU GLY SEQRES 32 B 527 SER THR HIS LEU THR ARG ASP GLY GLU ARG LYS SER MET SEQRES 33 B 527 SER VAL GLU ARG THR PHE SER GLU ILE ASN LYS ALA GLU SEQRES 34 B 527 GLU GLN TYR SER LEU CYS GLN GLU LEU CYS SER GLU LEU SEQRES 35 B 527 ALA GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY ARG THR SEQRES 36 B 527 VAL THR ILE LYS LEU LYS ASN VAL ASN PHE GLU VAL LYS SEQRES 37 B 527 THR ARG ALA SER THR VAL SER SER VAL VAL SER THR ALA SEQRES 38 B 527 GLU GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU LYS THR SEQRES 39 B 527 GLU ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG LEU ARG SEQRES 40 B 527 LEU MET GLY VAL ARG ILE SER SER PHE PRO ASN GLU GLU SEQRES 41 B 527 ASP ARG LYS HIS GLN GLN ARG SEQRES 1 C 9 DC DG DG DA DT DC DG DA DC SEQRES 1 D 13 DC DT DA DT VKJ DT DC DG DA DT DC DC DG SEQRES 1 P 9 DC DG DG DA DT DC DG DA DC SEQRES 1 T 13 DC DT DA DT VKJ DT DC DG DA DT DC DC DG HET VKJ D 6 45 HET VKJ T 6 45 HET MG A 601 1 HET MG A 602 1 HET DZ4 A 603 30 HET PGE B 601 10 HET MG B 602 1 HET MG B 603 1 HET DZ4 B 604 30 HETNAM VKJ 2'-DEOXY-N-[(7R,8S,9R,10S)-7,8,9-TRIHYDROXY-7,8,9,10- HETNAM 2 VKJ TETRAHYDROBENZO[PQR]TETRAPHEN-10-YL]GUANOSINE 5'- HETNAM 3 VKJ (DIHYDROGEN PHOSPHATE) HETNAM MG MAGNESIUM ION HETNAM DZ4 2'-DEOXY-5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 DZ4 PHOSPHORYL]AMINO}PHOSPHORYL]ADENOSINE HETNAM PGE TRIETHYLENE GLYCOL FORMUL 4 VKJ 2(C30 H28 N5 O10 P) FORMUL 7 MG 4(MG 2+) FORMUL 9 DZ4 2(C10 H17 N6 O11 P3) FORMUL 10 PGE C6 H14 O4 FORMUL 14 HOH *82(H2 O) HELIX 1 AA1 GLU A 34 LYS A 45 1 12 HELIX 2 AA2 SER A 47 GLN A 73 1 27 HELIX 3 AA3 THR A 75 SER A 96 1 22 HELIX 4 AA4 ALA A 110 ASP A 119 1 10 HELIX 5 AA5 ASN A 120 LYS A 124 5 5 HELIX 6 AA6 ASN A 140 ARG A 145 1 6 HELIX 7 AA7 PRO A 153 CYS A 161 1 9 HELIX 8 AA8 ASN A 170 ALA A 186 1 17 HELIX 9 AA9 ILE A 204 GLN A 212 1 9 HELIX 10 AB1 ASN A 213 TRP A 214 5 2 HELIX 11 AB2 PRO A 215 LYS A 218 5 4 HELIX 12 AB3 SER A 289 THR A 306 1 18 HELIX 13 AB4 ASN A 316 ASN A 327 1 12 HELIX 14 AB5 ASN A 338 ASP A 348 1 11 HELIX 15 AB6 LEU A 349 VAL A 354 5 6 HELIX 16 AB7 GLY A 358 ALA A 367 1 10 HELIX 17 AB8 THR A 372 GLN A 379 1 8 HELIX 18 AB9 GLN A 379 PHE A 387 1 9 HELIX 19 AC1 SER A 388 LEU A 400 1 13 HELIX 20 AC2 LYS A 427 ARG A 450 1 24 HELIX 21 AC3 THR A 480 PHE A 500 1 21 HELIX 22 AC4 ASP B 32 LYS B 45 1 14 HELIX 23 AC5 SER B 47 GLN B 73 1 27 HELIX 24 AC6 THR B 75 ARG B 97 1 23 HELIX 25 AC7 ALA B 110 ASN B 120 1 11 HELIX 26 AC8 PRO B 121 LYS B 124 5 4 HELIX 27 AC9 ASN B 140 ARG B 145 1 6 HELIX 28 AD1 PRO B 153 CYS B 161 1 9 HELIX 29 AD2 ASN B 170 ASP B 189 1 20 HELIX 30 AD3 ILE B 204 ARG B 211 1 8 HELIX 31 AD4 SER B 289 THR B 305 1 17 HELIX 32 AD5 ASN B 316 ASN B 327 1 12 HELIX 33 AD6 ASN B 338 LYS B 347 1 10 HELIX 34 AD7 PRO B 350 VAL B 354 5 5 HELIX 35 AD8 GLY B 358 LEU B 368 1 11 HELIX 36 AD9 THR B 374 GLN B 379 1 6 HELIX 37 AE1 GLN B 379 PHE B 387 1 9 HELIX 38 AE2 SER B 388 LEU B 400 1 13 HELIX 39 AE3 LYS B 427 ARG B 450 1 24 HELIX 40 AE4 THR B 480 PHE B 500 1 21 SHEET 1 AA1 4 GLU A 199 ASN A 203 0 SHEET 2 AA1 4 ILE A 103 MET A 108 -1 N VAL A 104 O LEU A 202 SHEET 3 AA1 4 ALA A 309 ALA A 314 -1 O SER A 310 N ASP A 107 SHEET 4 AA1 4 GLN A 332 GLN A 334 1 O TYR A 333 N ILE A 313 SHEET 1 AA2 3 LEU A 136 SER A 139 0 SHEET 2 AA2 3 ILE A 128 GLY A 131 -1 N VAL A 130 O SER A 137 SHEET 3 AA2 3 ILE A 165 VAL A 167 1 O VAL A 167 N ALA A 129 SHEET 1 AA3 2 ARG A 220 PHE A 222 0 SHEET 2 AA3 2 SER A 283 VAL A 285 -1 O VAL A 284 N TYR A 221 SHEET 1 AA4 4 SER A 415 ILE A 425 0 SHEET 2 AA4 4 LEU A 506 SER A 514 -1 O ILE A 513 N MET A 416 SHEET 3 AA4 4 GLY A 453 ASN A 462 -1 N THR A 455 O SER A 514 SHEET 4 AA4 4 VAL A 467 VAL A 478 -1 O LYS A 468 N LEU A 460 SHEET 1 AA5 5 MET B 193 ALA B 194 0 SHEET 2 AA5 5 GLU B 199 ASN B 203 -1 O TYR B 201 N MET B 193 SHEET 3 AA5 5 ILE B 103 MET B 108 -1 N ILE B 106 O ALA B 200 SHEET 4 AA5 5 ALA B 309 ALA B 314 -1 O GLY B 312 N HIS B 105 SHEET 5 AA5 5 GLN B 332 GLN B 334 1 O TYR B 333 N ILE B 313 SHEET 1 AA6 3 LEU B 136 SER B 139 0 SHEET 2 AA6 3 ILE B 128 GLY B 131 -1 N VAL B 130 O THR B 138 SHEET 3 AA6 3 ILE B 165 VAL B 167 1 O VAL B 167 N ALA B 129 SHEET 1 AA7 2 ARG B 220 PHE B 222 0 SHEET 2 AA7 2 SER B 283 VAL B 285 -1 O VAL B 284 N TYR B 221 SHEET 1 AA8 4 SER B 415 ILE B 425 0 SHEET 2 AA8 4 LEU B 506 SER B 514 -1 O ILE B 513 N MET B 416 SHEET 3 AA8 4 GLY B 453 ASN B 462 -1 N THR B 457 O ARG B 512 SHEET 4 AA8 4 VAL B 467 VAL B 478 -1 O LYS B 468 N LEU B 460 LINK O3' DT D 5 P1 VKJ D 6 1555 1555 1.61 LINK O3 VKJ D 6 P DT D 7 1555 1555 1.55 LINK O3' DT T 5 P1 VKJ T 6 1555 1555 1.60 LINK O3 VKJ T 6 P DT T 7 1555 1555 1.56 LINK OD1 ASP A 107 MG MG A 601 1555 1555 2.16 LINK O MET A 108 MG MG A 601 1555 1555 2.19 LINK OD2 ASP A 198 MG MG A 601 1555 1555 2.19 LINK O ARG A 352 MG MG A 602 1555 1555 2.21 LINK O VAL A 354 MG MG A 602 1555 1555 2.21 LINK O ILE A 357 MG MG A 602 1555 1555 2.19 LINK MG MG A 601 O3G DZ4 A 603 1555 1555 2.18 LINK MG MG A 601 O1B DZ4 A 603 1555 1555 2.18 LINK MG MG A 601 O1A DZ4 A 603 1555 1555 2.16 LINK MG MG A 602 O HOH A 721 1555 1555 2.18 LINK MG MG A 602 OP1 DA C 12 1555 1555 2.21 LINK OD1 ASP B 107 MG MG B 602 1555 1555 2.18 LINK O MET B 108 MG MG B 602 1555 1555 2.19 LINK OD2 ASP B 198 MG MG B 602 1555 1555 2.19 LINK O ARG B 352 MG MG B 603 1555 1555 2.23 LINK O VAL B 354 MG MG B 603 1555 1555 2.19 LINK O ILE B 357 MG MG B 603 1555 1555 2.19 LINK MG MG B 602 O2B DZ4 B 604 1555 1555 2.18 LINK MG MG B 602 O3G DZ4 B 604 1555 1555 2.17 LINK MG MG B 602 O2A DZ4 B 604 1555 1555 2.18 LINK MG MG B 603 OP1 DA P 12 1555 1555 2.22 CISPEP 1 LYS A 328 PRO A 329 0 1.37 CISPEP 2 PHE A 500 PRO A 501 0 6.94 CISPEP 3 LYS B 328 PRO B 329 0 2.22 CISPEP 4 PHE B 500 PRO B 501 0 11.70 SITE 1 AC1 4 ASP A 107 MET A 108 ASP A 198 DZ4 A 603 SITE 1 AC2 5 ARG A 352 VAL A 354 ILE A 357 HOH A 721 SITE 2 AC2 5 DA C 12 SITE 1 AC3 16 ASP A 107 MET A 108 ASP A 109 ALA A 110 SITE 2 AC3 16 PHE A 111 TYR A 112 SER A 137 THR A 138 SITE 3 AC3 16 TYR A 141 ARG A 144 ASP A 198 GLU A 199 SITE 4 AC3 16 LYS A 328 MG A 601 DC C 13 DT D 5 SITE 1 AC4 3 ALA B 428 TYR B 432 LYS B 489 SITE 1 AC5 5 ASP B 107 MET B 108 ASP B 198 LYS B 328 SITE 2 AC5 5 DZ4 B 604 SITE 1 AC6 4 ARG B 352 VAL B 354 ILE B 357 DA P 12 SITE 1 AC7 17 ASP B 107 MET B 108 ASP B 109 ALA B 110 SITE 2 AC7 17 PHE B 111 TYR B 112 SER B 137 THR B 138 SITE 3 AC7 17 TYR B 141 ARG B 144 ALA B 151 ASP B 198 SITE 4 AC7 17 LYS B 328 MG B 602 HOH B 709 DC P 13 SITE 5 AC7 17 DT T 5 SITE 1 AC8 18 MET A 135 ALA A 151 PHE A 171 GLU A 419 SITE 2 AC8 18 THR A 421 ARG A 507 LEU A 508 DZ4 A 603 SITE 3 AC8 18 HOH A 702 HOH A 733 DC C 13 DA D 4 SITE 4 AC8 18 DT D 7 HOH D 101 HOH D 102 HOH D 103 SITE 5 AC8 18 HOH D 104 HOH D 105 SITE 1 AC9 16 PHE A 171 SER A 417 VAL A 418 GLU A 419 SITE 2 AC9 16 THR A 421 LEU A 508 HOH A 733 DA C 12 SITE 3 AC9 16 DC C 13 DT D 5 DC D 8 HOH D 101 SITE 4 AC9 16 HOH D 102 HOH D 103 HOH D 104 HOH D 105 SITE 1 AD1 15 MET B 135 ALA B 151 PHE B 171 GLU B 419 SITE 2 AD1 15 ARG B 420 THR B 421 ARG B 507 LEU B 508 SITE 3 AD1 15 DZ4 B 604 HOH B 702 DA P 12 DC P 13 SITE 4 AD1 15 DA T 4 DT T 7 HOH T 101 SITE 1 AD2 10 PHE B 171 VAL B 418 GLU B 419 ARG B 420 SITE 2 AD2 10 THR B 421 LEU B 508 DA P 12 DC P 13 SITE 3 AD2 10 DT T 5 DC T 8 CRYST1 65.250 128.820 167.460 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015326 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007763 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005972 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.943291 0.131273 0.304910 -8.46610 1 MTRIX2 2 0.133438 -0.990961 0.013826 -69.62407 1 MTRIX3 2 0.303969 0.027645 -0.952281 84.00893 1