PDB Short entry for 5TT2 HEADER LYASE 31-OCT-16 5TT2 TITLE INACTIVE CONFORMATION OF ENGINEERED HUMAN CYSTATHIONINE GAMMA LYASE TITLE 2 (E59N, R119L, E339V) TO DEPLETING METHIONINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTATHIONINE GAMMA-LYASE; COMPND 3 CHAIN: C, D; COMPND 4 SYNONYM: CYSTEINE-PROTEIN SULFHYDRASE,GAMMA-CYSTATHIONASE; COMPND 5 EC: 4.4.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS ENGINEERED PROTEIN, METHIONINASE, INACTIVE FORM, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR W.YAN,Y.ZHANG REVDAT 2 27-NOV-19 5TT2 1 REMARK REVDAT 1 11-OCT-17 5TT2 0 JRNL AUTH W.YAN,E.STONE,Y.J.ZHANG JRNL TITL STRUCTURAL SNAPSHOTS OF AN ENGINEERED JRNL TITL 2 CYSTATHIONINE-GAMMA-LYASE REVEAL THE CRITICAL ROLE OF JRNL TITL 3 ELECTROSTATIC INTERACTIONS IN THE ACTIVE SITE. JRNL REF BIOCHEMISTRY V. 56 876 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28106980 JRNL DOI 10.1021/ACS.BIOCHEM.6B01172 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 19542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4358 - 5.6394 0.96 2808 118 0.1950 0.2440 REMARK 3 2 5.6394 - 4.4771 0.98 2685 129 0.1640 0.1911 REMARK 3 3 4.4771 - 3.9114 0.98 2641 149 0.1656 0.1899 REMARK 3 4 3.9114 - 3.5539 0.98 2618 150 0.1890 0.2737 REMARK 3 5 3.5539 - 3.2993 0.98 2600 157 0.2289 0.2953 REMARK 3 6 3.2993 - 3.1048 0.98 2595 158 0.2557 0.3312 REMARK 3 7 3.1048 - 2.9493 0.98 2600 134 0.3067 0.3800 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5456 REMARK 3 ANGLE : 0.703 7404 REMARK 3 CHIRALITY : 0.028 854 REMARK 3 PLANARITY : 0.005 934 REMARK 3 DIHEDRAL : 14.609 1962 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN C AND RESID 29:248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6532 -31.1849 12.7994 REMARK 3 T TENSOR REMARK 3 T11: 0.4410 T22: 0.2695 REMARK 3 T33: 0.5317 T12: -0.0873 REMARK 3 T13: -0.1009 T23: 0.0667 REMARK 3 L TENSOR REMARK 3 L11: 1.3228 L22: 1.0911 REMARK 3 L33: 1.4089 L12: -0.0376 REMARK 3 L13: 0.3538 L23: 0.6562 REMARK 3 S TENSOR REMARK 3 S11: -0.0745 S12: 0.0178 S13: 0.4231 REMARK 3 S21: 0.1356 S22: -0.0197 S23: -0.2266 REMARK 3 S31: -0.3166 S32: 0.1128 S33: 0.0584 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN C AND RESID 249:331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4978 -33.7255 16.2953 REMARK 3 T TENSOR REMARK 3 T11: 0.3588 T22: 0.1862 REMARK 3 T33: 0.3840 T12: -0.0060 REMARK 3 T13: -0.0809 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.6581 L22: 0.7669 REMARK 3 L33: 1.5631 L12: -0.1437 REMARK 3 L13: 0.1048 L23: 0.1646 REMARK 3 S TENSOR REMARK 3 S11: -0.0704 S12: 0.0020 S13: 0.3685 REMARK 3 S21: 0.1096 S22: -0.0159 S23: -0.2109 REMARK 3 S31: -0.2497 S32: -0.0532 S33: 0.0745 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 332:418 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6756 -35.5416 35.6196 REMARK 3 T TENSOR REMARK 3 T11: 0.4757 T22: 0.4048 REMARK 3 T33: 0.3887 T12: 0.0339 REMARK 3 T13: -0.1188 T23: -0.0648 REMARK 3 L TENSOR REMARK 3 L11: 1.6041 L22: 2.3279 REMARK 3 L33: 2.4441 L12: 0.5244 REMARK 3 L13: 0.2855 L23: 0.7919 REMARK 3 S TENSOR REMARK 3 S11: 0.0541 S12: -0.5582 S13: 0.0252 REMARK 3 S21: 0.3364 S22: -0.1888 S23: -0.0821 REMARK 3 S31: -0.2244 S32: -0.0875 S33: 0.0931 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 29:248 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.0550 -62.2729 14.0809 REMARK 3 T TENSOR REMARK 3 T11: 0.2546 T22: 0.3831 REMARK 3 T33: 0.3695 T12: -0.0168 REMARK 3 T13: 0.0364 T23: -0.0300 REMARK 3 L TENSOR REMARK 3 L11: 1.8113 L22: 1.4610 REMARK 3 L33: 1.5867 L12: 0.0805 REMARK 3 L13: 0.4281 L23: 0.0404 REMARK 3 S TENSOR REMARK 3 S11: 0.0533 S12: -0.0006 S13: -0.1428 REMARK 3 S21: 0.0206 S22: -0.0228 S23: 0.1700 REMARK 3 S31: 0.1011 S32: -0.3564 S33: -0.0079 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN D AND RESID 249:331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1272 -51.9613 10.5501 REMARK 3 T TENSOR REMARK 3 T11: 0.2242 T22: 0.3136 REMARK 3 T33: 0.3095 T12: 0.0116 REMARK 3 T13: 0.0124 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.8889 L22: 1.6279 REMARK 3 L33: 1.3626 L12: -0.3019 REMARK 3 L13: 0.1484 L23: -0.3444 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: -0.1073 S13: -0.0281 REMARK 3 S21: -0.0035 S22: -0.0181 S23: 0.0932 REMARK 3 S31: -0.0376 S32: -0.2925 S33: 0.0219 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN D AND RESID 332:418 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2089 -47.3536 -8.7877 REMARK 3 T TENSOR REMARK 3 T11: 0.2957 T22: 0.3509 REMARK 3 T33: 0.2846 T12: 0.0852 REMARK 3 T13: 0.0205 T23: -0.0995 REMARK 3 L TENSOR REMARK 3 L11: 2.5540 L22: 1.4064 REMARK 3 L33: 2.7888 L12: 0.1304 REMARK 3 L13: 0.9028 L23: -0.0951 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: 0.3594 S13: 0.0558 REMARK 3 S21: -0.1854 S22: -0.1521 S23: -0.2584 REMARK 3 S31: -0.0087 S32: -0.0834 S33: 0.0586 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000224759. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97648 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.949 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.15100 REMARK 200 R SYM (I) : 0.15100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES PH6.5 20% PEG3350 200MM NA/K REMARK 280 TARTRATE 200MM LITHIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.11200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.11200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.81100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.11200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.11200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.81100 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.11200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.11200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.81100 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.11200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.11200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 62.81100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 49980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -224.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -120.22400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 3 REMARK 465 GLY C 4 REMARK 465 GLY C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 HIS C 11 REMARK 465 GLY C 12 REMARK 465 LEU C 13 REMARK 465 GLU C 14 REMARK 465 VAL C 15 REMARK 465 LEU C 16 REMARK 465 PHE C 17 REMARK 465 GLN C 18 REMARK 465 GLY C 19 REMARK 465 PRO C 20 REMARK 465 GLN C 21 REMARK 465 GLU C 22 REMARK 465 LYS C 23 REMARK 465 ASP C 24 REMARK 465 ALA C 25 REMARK 465 SER C 26 REMARK 465 SER C 27 REMARK 465 GLN C 28 REMARK 465 ASP C 47 REMARK 465 PRO C 48 REMARK 465 GLU C 49 REMARK 465 GLN C 50 REMARK 465 TRP C 51 REMARK 465 THR C 52 REMARK 465 SER C 53 REMARK 465 ARG C 54 REMARK 465 ALA C 55 REMARK 465 VAL C 56 REMARK 465 VAL C 57 REMARK 465 PRO C 58 REMARK 465 PRO C 59 REMARK 465 ILE C 60 REMARK 465 SER C 61 REMARK 465 LEU C 62 REMARK 465 SER C 63 REMARK 465 THR C 64 REMARK 465 THR C 65 REMARK 465 PHE C 66 REMARK 465 LYS C 67 REMARK 465 GLN C 68 REMARK 465 GLY C 69 REMARK 465 ALA C 70 REMARK 465 PRO C 71 REMARK 465 GLY C 72 REMARK 465 GLN C 73 REMARK 465 HIS C 74 REMARK 465 SER C 75 REMARK 465 GLY C 76 REMARK 465 PHE C 77 REMARK 465 ASN C 78 REMARK 465 TYR C 79 REMARK 465 SER C 80 REMARK 465 ARG C 81 REMARK 465 SER C 82 REMARK 465 HIS C 375 REMARK 465 ALA C 376 REMARK 465 SER C 377 REMARK 465 VAL C 378 REMARK 465 LEU C 379 REMARK 465 LYS C 380 REMARK 465 ASN C 381 REMARK 465 ASP C 382 REMARK 465 ARG C 383 REMARK 465 ASP C 384 REMARK 465 VAL C 385 REMARK 465 PRO C 419 REMARK 465 SER C 420 REMARK 465 GLY C 421 REMARK 465 ILE C 422 REMARK 465 HIS C 423 REMARK 465 SER C 424 REMARK 465 MET D 3 REMARK 465 GLY D 4 REMARK 465 GLY D 5 REMARK 465 HIS D 6 REMARK 465 HIS D 7 REMARK 465 HIS D 8 REMARK 465 HIS D 9 REMARK 465 HIS D 10 REMARK 465 HIS D 11 REMARK 465 GLY D 12 REMARK 465 LEU D 13 REMARK 465 GLU D 14 REMARK 465 VAL D 15 REMARK 465 LEU D 16 REMARK 465 PHE D 17 REMARK 465 GLN D 18 REMARK 465 GLY D 19 REMARK 465 PRO D 20 REMARK 465 GLN D 21 REMARK 465 GLU D 22 REMARK 465 LYS D 23 REMARK 465 ASP D 24 REMARK 465 ALA D 25 REMARK 465 SER D 26 REMARK 465 SER D 27 REMARK 465 GLN D 28 REMARK 465 ASP D 47 REMARK 465 PRO D 48 REMARK 465 GLU D 49 REMARK 465 GLN D 50 REMARK 465 TRP D 51 REMARK 465 THR D 52 REMARK 465 SER D 53 REMARK 465 ARG D 54 REMARK 465 ALA D 55 REMARK 465 VAL D 56 REMARK 465 VAL D 57 REMARK 465 PRO D 58 REMARK 465 PRO D 59 REMARK 465 ILE D 60 REMARK 465 SER D 61 REMARK 465 LEU D 62 REMARK 465 SER D 63 REMARK 465 THR D 64 REMARK 465 THR D 65 REMARK 465 PHE D 66 REMARK 465 LYS D 67 REMARK 465 GLN D 68 REMARK 465 GLY D 69 REMARK 465 ALA D 70 REMARK 465 PRO D 71 REMARK 465 GLY D 72 REMARK 465 GLN D 73 REMARK 465 HIS D 74 REMARK 465 SER D 75 REMARK 465 GLY D 76 REMARK 465 PHE D 77 REMARK 465 ASN D 78 REMARK 465 TYR D 79 REMARK 465 SER D 80 REMARK 465 ARG D 81 REMARK 465 SER D 82 REMARK 465 HIS D 375 REMARK 465 ALA D 376 REMARK 465 SER D 377 REMARK 465 VAL D 378 REMARK 465 LEU D 379 REMARK 465 LYS D 380 REMARK 465 ASN D 381 REMARK 465 ASP D 382 REMARK 465 ARG D 383 REMARK 465 ASP D 384 REMARK 465 VAL D 385 REMARK 465 PRO D 419 REMARK 465 SER D 420 REMARK 465 GLY D 421 REMARK 465 ILE D 422 REMARK 465 HIS D 423 REMARK 465 SER D 424 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS C 236 18.65 56.80 REMARK 500 HIS D 236 18.36 56.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 502 DBREF 5TT2 C 21 424 UNP P32929 CGL_HUMAN 2 405 DBREF 5TT2 D 21 424 UNP P32929 CGL_HUMAN 2 405 SEQADV 5TT2 MET C 3 UNP P32929 INITIATING METHIONINE SEQADV 5TT2 GLY C 4 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLY C 5 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS C 6 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS C 7 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS C 8 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS C 9 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS C 10 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS C 11 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLY C 12 UNP P32929 EXPRESSION TAG SEQADV 5TT2 LEU C 13 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLU C 14 UNP P32929 EXPRESSION TAG SEQADV 5TT2 VAL C 15 UNP P32929 EXPRESSION TAG SEQADV 5TT2 LEU C 16 UNP P32929 EXPRESSION TAG SEQADV 5TT2 PHE C 17 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLN C 18 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLY C 19 UNP P32929 EXPRESSION TAG SEQADV 5TT2 PRO C 20 UNP P32929 EXPRESSION TAG SEQADV 5TT2 ASN C 78 UNP P32929 GLU 59 ENGINEERED MUTATION SEQADV 5TT2 LEU C 138 UNP P32929 ARG 119 ENGINEERED MUTATION SEQADV 5TT2 VAL C 358 UNP P32929 GLU 339 ENGINEERED MUTATION SEQADV 5TT2 ILE C 422 UNP P32929 SER 403 CONFLICT SEQADV 5TT2 MET D 3 UNP P32929 INITIATING METHIONINE SEQADV 5TT2 GLY D 4 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLY D 5 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS D 6 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS D 7 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS D 8 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS D 9 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS D 10 UNP P32929 EXPRESSION TAG SEQADV 5TT2 HIS D 11 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLY D 12 UNP P32929 EXPRESSION TAG SEQADV 5TT2 LEU D 13 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLU D 14 UNP P32929 EXPRESSION TAG SEQADV 5TT2 VAL D 15 UNP P32929 EXPRESSION TAG SEQADV 5TT2 LEU D 16 UNP P32929 EXPRESSION TAG SEQADV 5TT2 PHE D 17 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLN D 18 UNP P32929 EXPRESSION TAG SEQADV 5TT2 GLY D 19 UNP P32929 EXPRESSION TAG SEQADV 5TT2 PRO D 20 UNP P32929 EXPRESSION TAG SEQADV 5TT2 ASN D 78 UNP P32929 GLU 59 ENGINEERED MUTATION SEQADV 5TT2 LEU D 138 UNP P32929 ARG 119 ENGINEERED MUTATION SEQADV 5TT2 VAL D 358 UNP P32929 GLU 339 ENGINEERED MUTATION SEQADV 5TT2 ILE D 422 UNP P32929 SER 403 CONFLICT SEQRES 1 C 422 MET GLY GLY HIS HIS HIS HIS HIS HIS GLY LEU GLU VAL SEQRES 2 C 422 LEU PHE GLN GLY PRO GLN GLU LYS ASP ALA SER SER GLN SEQRES 3 C 422 GLY PHE LEU PRO HIS PHE GLN HIS PHE ALA THR GLN ALA SEQRES 4 C 422 ILE HIS VAL GLY GLN ASP PRO GLU GLN TRP THR SER ARG SEQRES 5 C 422 ALA VAL VAL PRO PRO ILE SER LEU SER THR THR PHE LYS SEQRES 6 C 422 GLN GLY ALA PRO GLY GLN HIS SER GLY PHE ASN TYR SER SEQRES 7 C 422 ARG SER GLY ASN PRO THR ARG ASN CYS LEU GLU LYS ALA SEQRES 8 C 422 VAL ALA ALA LEU ASP GLY ALA LYS TYR CYS LEU ALA PHE SEQRES 9 C 422 ALA SER GLY LEU ALA ALA THR VAL THR ILE THR HIS LEU SEQRES 10 C 422 LEU LYS ALA GLY ASP GLN ILE ILE CYS MET ASP ASP VAL SEQRES 11 C 422 TYR GLY GLY THR ASN LEU TYR PHE ARG GLN VAL ALA SER SEQRES 12 C 422 GLU PHE GLY LEU LYS ILE SER PHE VAL ASP CYS SER LYS SEQRES 13 C 422 ILE LYS LEU LEU GLU ALA ALA ILE THR PRO GLU THR LYS SEQRES 14 C 422 LEU VAL TRP ILE GLU THR PRO THR ASN PRO THR GLN LYS SEQRES 15 C 422 VAL ILE ASP ILE GLU GLY CYS ALA HIS ILE VAL HIS LYS SEQRES 16 C 422 HIS GLY ASP ILE ILE LEU VAL VAL ASP ASN THR PHE MET SEQRES 17 C 422 SER PRO TYR PHE GLN ARG PRO LEU ALA LEU GLY ALA ASP SEQRES 18 C 422 ILE SER MET TYR SER ALA THR LLP TYR MET ASN GLY HIS SEQRES 19 C 422 SER ASP VAL VAL MET GLY LEU VAL SER VAL ASN CYS GLU SEQRES 20 C 422 SER LEU HIS ASN ARG LEU ARG PHE LEU GLN ASN SER LEU SEQRES 21 C 422 GLY ALA VAL PRO SER PRO ILE ASP CYS TYR LEU CYS ASN SEQRES 22 C 422 ARG GLY LEU LYS THR LEU HIS VAL ARG MET GLU LYS HIS SEQRES 23 C 422 PHE LYS ASN GLY MET ALA VAL ALA GLN PHE LEU GLU SER SEQRES 24 C 422 ASN PRO TRP VAL GLU LYS VAL ILE TYR PRO GLY LEU PRO SEQRES 25 C 422 SER HIS PRO GLN HIS GLU LEU VAL LYS ARG GLN CYS THR SEQRES 26 C 422 GLY CYS THR GLY MET VAL THR PHE TYR ILE LYS GLY THR SEQRES 27 C 422 LEU GLN HIS ALA GLU ILE PHE LEU LYS ASN LEU LYS LEU SEQRES 28 C 422 PHE THR LEU ALA VAL SER LEU GLY GLY PHE GLU SER LEU SEQRES 29 C 422 ALA GLU LEU PRO ALA ILE MET THR HIS ALA SER VAL LEU SEQRES 30 C 422 LYS ASN ASP ARG ASP VAL LEU GLY ILE SER ASP THR LEU SEQRES 31 C 422 ILE ARG LEU SER VAL GLY LEU GLU ASP GLU GLU ASP LEU SEQRES 32 C 422 LEU GLU ASP LEU ASP GLN ALA LEU LYS ALA ALA HIS PRO SEQRES 33 C 422 PRO SER GLY ILE HIS SER SEQRES 1 D 422 MET GLY GLY HIS HIS HIS HIS HIS HIS GLY LEU GLU VAL SEQRES 2 D 422 LEU PHE GLN GLY PRO GLN GLU LYS ASP ALA SER SER GLN SEQRES 3 D 422 GLY PHE LEU PRO HIS PHE GLN HIS PHE ALA THR GLN ALA SEQRES 4 D 422 ILE HIS VAL GLY GLN ASP PRO GLU GLN TRP THR SER ARG SEQRES 5 D 422 ALA VAL VAL PRO PRO ILE SER LEU SER THR THR PHE LYS SEQRES 6 D 422 GLN GLY ALA PRO GLY GLN HIS SER GLY PHE ASN TYR SER SEQRES 7 D 422 ARG SER GLY ASN PRO THR ARG ASN CYS LEU GLU LYS ALA SEQRES 8 D 422 VAL ALA ALA LEU ASP GLY ALA LYS TYR CYS LEU ALA PHE SEQRES 9 D 422 ALA SER GLY LEU ALA ALA THR VAL THR ILE THR HIS LEU SEQRES 10 D 422 LEU LYS ALA GLY ASP GLN ILE ILE CYS MET ASP ASP VAL SEQRES 11 D 422 TYR GLY GLY THR ASN LEU TYR PHE ARG GLN VAL ALA SER SEQRES 12 D 422 GLU PHE GLY LEU LYS ILE SER PHE VAL ASP CYS SER LYS SEQRES 13 D 422 ILE LYS LEU LEU GLU ALA ALA ILE THR PRO GLU THR LYS SEQRES 14 D 422 LEU VAL TRP ILE GLU THR PRO THR ASN PRO THR GLN LYS SEQRES 15 D 422 VAL ILE ASP ILE GLU GLY CYS ALA HIS ILE VAL HIS LYS SEQRES 16 D 422 HIS GLY ASP ILE ILE LEU VAL VAL ASP ASN THR PHE MET SEQRES 17 D 422 SER PRO TYR PHE GLN ARG PRO LEU ALA LEU GLY ALA ASP SEQRES 18 D 422 ILE SER MET TYR SER ALA THR LLP TYR MET ASN GLY HIS SEQRES 19 D 422 SER ASP VAL VAL MET GLY LEU VAL SER VAL ASN CYS GLU SEQRES 20 D 422 SER LEU HIS ASN ARG LEU ARG PHE LEU GLN ASN SER LEU SEQRES 21 D 422 GLY ALA VAL PRO SER PRO ILE ASP CYS TYR LEU CYS ASN SEQRES 22 D 422 ARG GLY LEU LYS THR LEU HIS VAL ARG MET GLU LYS HIS SEQRES 23 D 422 PHE LYS ASN GLY MET ALA VAL ALA GLN PHE LEU GLU SER SEQRES 24 D 422 ASN PRO TRP VAL GLU LYS VAL ILE TYR PRO GLY LEU PRO SEQRES 25 D 422 SER HIS PRO GLN HIS GLU LEU VAL LYS ARG GLN CYS THR SEQRES 26 D 422 GLY CYS THR GLY MET VAL THR PHE TYR ILE LYS GLY THR SEQRES 27 D 422 LEU GLN HIS ALA GLU ILE PHE LEU LYS ASN LEU LYS LEU SEQRES 28 D 422 PHE THR LEU ALA VAL SER LEU GLY GLY PHE GLU SER LEU SEQRES 29 D 422 ALA GLU LEU PRO ALA ILE MET THR HIS ALA SER VAL LEU SEQRES 30 D 422 LYS ASN ASP ARG ASP VAL LEU GLY ILE SER ASP THR LEU SEQRES 31 D 422 ILE ARG LEU SER VAL GLY LEU GLU ASP GLU GLU ASP LEU SEQRES 32 D 422 LEU GLU ASP LEU ASP GLN ALA LEU LYS ALA ALA HIS PRO SEQRES 33 D 422 PRO SER GLY ILE HIS SER MODRES 5TT2 LLP C 231 LYS MODIFIED RESIDUE MODRES 5TT2 LLP D 231 LYS MODIFIED RESIDUE HET LLP C 231 24 HET LLP D 231 24 HET SO4 C 501 5 HET SO4 C 502 5 HET SO4 D 501 5 HET SO4 D 502 5 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM SO4 SULFATE ION HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 SO4 4(O4 S 2-) HELIX 1 AA1 HIS C 36 VAL C 44 1 9 HELIX 2 AA2 ASN C 84 ASP C 98 1 15 HELIX 3 AA3 SER C 108 HIS C 118 1 11 HELIX 4 AA4 THR C 136 PHE C 147 1 12 HELIX 5 AA5 LYS C 158 ALA C 165 1 8 HELIX 6 AA6 ASP C 187 HIS C 196 1 10 HELIX 7 AA7 ARG C 216 GLY C 221 5 6 HELIX 8 AA8 TYR C 232 SER C 237 1 6 HELIX 9 AA9 CYS C 248 GLY C 263 1 16 HELIX 10 AB1 SER C 267 LYS C 279 1 13 HELIX 11 AB2 THR C 280 SER C 301 1 22 HELIX 12 AB3 GLN C 318 CYS C 326 1 9 HELIX 13 AB4 THR C 340 LEU C 351 1 12 HELIX 14 AB5 ASP C 401 ALA C 416 1 16 HELIX 15 AB6 HIS D 36 VAL D 44 1 9 HELIX 16 AB7 ASN D 84 ASP D 98 1 15 HELIX 17 AB8 SER D 108 HIS D 118 1 11 HELIX 18 AB9 THR D 136 PHE D 147 1 12 HELIX 19 AC1 LYS D 158 ALA D 165 1 8 HELIX 20 AC2 ASP D 187 HIS D 196 1 10 HELIX 21 AC3 PRO D 217 GLY D 221 5 5 HELIX 22 AC4 TYR D 232 SER D 237 1 6 HELIX 23 AC5 CYS D 248 GLY D 263 1 16 HELIX 24 AC6 SER D 267 LYS D 279 1 13 HELIX 25 AC7 THR D 280 SER D 301 1 22 HELIX 26 AC8 GLN D 318 CYS D 326 1 9 HELIX 27 AC9 THR D 340 LEU D 351 1 12 HELIX 28 AD1 ASP D 401 HIS D 417 1 17 SHEET 1 AA1 7 TYR C 102 PHE C 106 0 SHEET 2 AA1 7 MET C 241 VAL C 246 -1 O GLY C 242 N PHE C 106 SHEET 3 AA1 7 ILE C 224 ALA C 229 -1 N TYR C 227 O LEU C 243 SHEET 4 AA1 7 ILE C 202 ASP C 206 1 N VAL C 205 O ILE C 224 SHEET 5 AA1 7 THR C 170 GLU C 176 1 N ILE C 175 O ASP C 206 SHEET 6 AA1 7 GLN C 125 MET C 129 1 N GLN C 125 O LYS C 171 SHEET 7 AA1 7 LYS C 150 VAL C 154 1 O LYS C 150 N ILE C 126 SHEET 1 AA2 5 VAL C 305 ILE C 309 0 SHEET 2 AA2 5 MET C 332 ILE C 337 -1 O THR C 334 N ILE C 309 SHEET 3 AA2 5 LEU C 392 SER C 396 -1 O LEU C 395 N VAL C 333 SHEET 4 AA2 5 LEU C 366 GLU C 368 -1 N LEU C 366 O SER C 396 SHEET 5 AA2 5 THR C 355 LEU C 356 1 N THR C 355 O ALA C 367 SHEET 1 AA3 7 TYR D 102 PHE D 106 0 SHEET 2 AA3 7 MET D 241 VAL D 246 -1 O GLY D 242 N PHE D 106 SHEET 3 AA3 7 ILE D 224 ALA D 229 -1 N TYR D 227 O LEU D 243 SHEET 4 AA3 7 ILE D 202 ASP D 206 1 N VAL D 205 O ILE D 224 SHEET 5 AA3 7 THR D 170 GLU D 176 1 N ILE D 175 O ASP D 206 SHEET 6 AA3 7 GLN D 125 MET D 129 1 N ILE D 127 O TRP D 174 SHEET 7 AA3 7 LYS D 150 VAL D 154 1 O SER D 152 N CYS D 128 SHEET 1 AA4 5 VAL D 305 ILE D 309 0 SHEET 2 AA4 5 MET D 332 ILE D 337 -1 O THR D 334 N ILE D 309 SHEET 3 AA4 5 LEU D 392 SER D 396 -1 O LEU D 395 N VAL D 333 SHEET 4 AA4 5 LEU D 366 GLU D 368 -1 N LEU D 366 O SER D 396 SHEET 5 AA4 5 THR D 355 LEU D 356 1 N THR D 355 O ALA D 367 LINK C THR C 230 N LLP C 231 1555 1555 1.33 LINK C LLP C 231 N TYR C 232 1555 1555 1.33 LINK C THR D 230 N LLP D 231 1555 1555 1.33 LINK C LLP D 231 N TYR D 232 1555 1555 1.33 CISPEP 1 THR C 177 PRO C 178 0 -7.69 CISPEP 2 ASN C 180 PRO C 181 0 3.75 CISPEP 3 THR D 177 PRO D 178 0 -7.99 CISPEP 4 ASN D 180 PRO D 181 0 4.05 SITE 1 AC1 6 ASN C 234 GLY C 235 ARG C 284 HIS C 288 SITE 2 AC1 6 GLY C 362 PHE C 363 SITE 1 AC2 7 ASP C 131 VAL C 132 TYR C 133 THR C 179 SITE 2 AC2 7 ASN C 180 PRO C 181 THR C 182 SITE 1 AC3 6 MET D 233 ASN D 234 GLY D 235 ARG D 284 SITE 2 AC3 6 HIS D 288 GLY D 362 SITE 1 AC4 8 ASP D 131 VAL D 132 TYR D 133 THR D 179 SITE 2 AC4 8 ASN D 180 PRO D 181 THR D 182 LYS D 184 CRYST1 120.224 120.224 125.622 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008318 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008318 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007960 0.00000