PDB Short entry for 5UC7 HEADER TRANSFERASE 21-DEC-16 5UC7 TITLE CRYSTAL STRUCTURE OF BIOA / 7,8-DIAMINOPELARGONIC ACID TITLE 2 AMINOTRANSFERASE / DAPA SYNTHASE FROM CITROBACTER RODENTIUM, PLP TITLE 3 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 7,8-DIAMINO-PELARGONIC ACID AMINOTRANSFERASE,8- COMPND 5 DIAMINONONANOATE SYNTHASE,DIAMINOPELARGONIC ACID SYNTHASE; COMPND 6 EC: 2.6.1.62; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CITROBACTER RODENTIUM; SOURCE 3 ORGANISM_TAXID: 97825; SOURCE 4 STRAIN: ICC168; SOURCE 5 GENE: BIOA, ROD_07751; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, PLP-DEPENDENT FOLD TYPE I KEYWDS 2 SUB CLASS II AMINOTRANSFERASE, BIOTIN BIOSYNTHESIS, 7, 8- KEYWDS 3 DIAMINOPELARGONIC ACID, DAPA, STRUCTURAL GENOMICS, CSGID, CENTER FOR KEYWDS 4 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, NIAID, NATIONAL KEYWDS 5 INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,E.EVDOKIMOVA,R.DI LEO,A.SAVCHENKO,W.F.ANDERSON,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 5 15-NOV-23 5UC7 1 REMARK REVDAT 4 04-OCT-23 5UC7 1 REMARK REVDAT 3 11-DEC-19 5UC7 1 REMARK REVDAT 2 27-SEP-17 5UC7 1 REMARK REVDAT 1 25-JAN-17 5UC7 0 JRNL AUTH P.J.STOGIOS JRNL TITL CRYSTAL STRUCTURE OF BIOA / 7,8-DIAMINOPELARGONIC ACID JRNL TITL 2 AMINOTRANSFERASE / DAPA SYNTHASE FROM CITROBACTER RODENTIUM, JRNL TITL 3 PLP COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2481 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 36737 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.440 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1658 - 4.4220 0.98 2677 154 0.1470 0.1795 REMARK 3 2 4.4220 - 3.5103 1.00 2581 148 0.1184 0.1579 REMARK 3 3 3.5103 - 3.0667 1.00 2570 147 0.1379 0.1718 REMARK 3 4 3.0667 - 2.7864 1.00 2548 148 0.1468 0.1884 REMARK 3 5 2.7864 - 2.5867 1.00 2525 145 0.1456 0.2193 REMARK 3 6 2.5867 - 2.4342 1.00 2533 146 0.1549 0.2104 REMARK 3 7 2.4342 - 2.3123 1.00 2542 146 0.1493 0.2145 REMARK 3 8 2.3123 - 2.2116 1.00 2494 144 0.1524 0.1721 REMARK 3 9 2.2116 - 2.1265 1.00 2513 144 0.1503 0.2168 REMARK 3 10 2.1265 - 2.0531 1.00 2505 144 0.1645 0.2334 REMARK 3 11 2.0531 - 1.9889 1.00 2524 146 0.1828 0.2282 REMARK 3 12 1.9889 - 1.9321 1.00 2463 142 0.2144 0.2815 REMARK 3 13 1.9321 - 1.8812 0.78 1943 111 0.2345 0.2841 REMARK 3 14 1.8812 - 1.8353 0.93 2320 134 0.2469 0.3170 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 3504 REMARK 3 ANGLE : 1.410 4770 REMARK 3 CHIRALITY : 0.109 521 REMARK 3 PLANARITY : 0.010 625 REMARK 3 DIHEDRAL : 19.276 1296 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID -1:109) REMARK 3 ORIGIN FOR THE GROUP (A): 38.4531 36.3477 4.4929 REMARK 3 T TENSOR REMARK 3 T11: 0.0764 T22: 0.0970 REMARK 3 T33: 0.0951 T12: -0.0036 REMARK 3 T13: -0.0003 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.5556 L22: 1.0520 REMARK 3 L33: 0.3241 L12: -0.4447 REMARK 3 L13: -0.0427 L23: 0.1359 REMARK 3 S TENSOR REMARK 3 S11: -0.0045 S12: -0.0763 S13: -0.1221 REMARK 3 S21: 0.0593 S22: 0.0081 S23: -0.0495 REMARK 3 S31: 0.0388 S32: 0.0186 S33: -0.0021 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 110:179) REMARK 3 ORIGIN FOR THE GROUP (A): 31.2566 38.2500 30.0618 REMARK 3 T TENSOR REMARK 3 T11: 0.4983 T22: 0.4471 REMARK 3 T33: 0.2867 T12: 0.0656 REMARK 3 T13: -0.0580 T23: 0.0714 REMARK 3 L TENSOR REMARK 3 L11: 3.0790 L22: 3.9545 REMARK 3 L33: 4.2093 L12: 1.7080 REMARK 3 L13: -2.2070 L23: 1.3668 REMARK 3 S TENSOR REMARK 3 S11: -0.1026 S12: -0.7379 S13: -0.5579 REMARK 3 S21: 1.0988 S22: -0.0479 S23: -0.6644 REMARK 3 S31: 0.4324 S32: 0.5942 S33: 0.1433 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 180:276) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5683 29.8476 25.4943 REMARK 3 T TENSOR REMARK 3 T11: 0.4232 T22: 0.3477 REMARK 3 T33: 0.2777 T12: -0.0455 REMARK 3 T13: 0.1037 T23: 0.0848 REMARK 3 L TENSOR REMARK 3 L11: 1.4590 L22: 0.6159 REMARK 3 L33: 2.6263 L12: -0.1604 REMARK 3 L13: -0.1058 L23: 0.2993 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: -0.5424 S13: -0.4377 REMARK 3 S21: 0.5972 S22: -0.0099 S23: 0.2247 REMARK 3 S31: 0.4554 S32: -0.1529 S33: -0.0190 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 277:338) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5173 43.0704 10.9545 REMARK 3 T TENSOR REMARK 3 T11: 0.1146 T22: 0.1482 REMARK 3 T33: 0.1291 T12: 0.0074 REMARK 3 T13: 0.0376 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.9323 L22: 1.2860 REMARK 3 L33: 0.6866 L12: -0.2012 REMARK 3 L13: -0.1274 L23: -0.7704 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: -0.2824 S13: 0.1763 REMARK 3 S21: 0.2697 S22: 0.0340 S23: 0.1635 REMARK 3 S31: -0.1694 S32: -0.0346 S33: -0.0062 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 339:429) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4210 13.7992 11.1938 REMARK 3 T TENSOR REMARK 3 T11: 0.2176 T22: 0.1361 REMARK 3 T33: 0.2832 T12: -0.0080 REMARK 3 T13: -0.0597 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 2.6559 L22: 2.3849 REMARK 3 L33: 2.2294 L12: -1.0311 REMARK 3 L13: 0.1909 L23: -0.4884 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: -0.3134 S13: -0.3592 REMARK 3 S21: 0.4072 S22: 0.0211 S23: -0.3143 REMARK 3 S31: 0.2589 S32: 0.1162 S33: -0.0054 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UC7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225639. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36804 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.835 REMARK 200 RESOLUTION RANGE LOW (A) : 51.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : 0.10400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.77800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1QJ5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM TARTRATE PH 7, 20% REMARK 280 (W/V) PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 37.68450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.15300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.68450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.15300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 75.36900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 88.30600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 651 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 684 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 891 O HOH A 972 2.06 REMARK 500 O HOH A 892 O HOH A 989 2.14 REMARK 500 O HOH A 632 O HOH A 893 2.14 REMARK 500 O HOH A 907 O HOH A 937 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 52 79.18 66.91 REMARK 500 TRP A 53 -39.94 74.93 REMARK 500 MET A 75 126.13 -175.27 REMARK 500 SER A 160 11.15 -67.18 REMARK 500 MET A 182 27.76 -146.16 REMARK 500 ILE A 213 -47.30 75.47 REMARK 500 LLP A 274 -96.38 40.47 REMARK 500 ASN A 313 116.14 -35.81 REMARK 500 ALA A 364 49.20 -98.07 REMARK 500 SER A 428 -158.14 -100.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1045 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A1046 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A1047 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A1048 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1049 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH A1050 DISTANCE = 7.08 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95758 RELATED DB: TARGETTRACK DBREF 5UC7 A 1 429 UNP D2TPI3 D2TPI3_CITRI 1 429 SEQADV 5UC7 GLN A -1 UNP D2TPI3 EXPRESSION TAG SEQADV 5UC7 GLY A 0 UNP D2TPI3 EXPRESSION TAG SEQRES 1 A 431 GLN GLY MET THR THR ASP ASP LEU ALA PHE ASP ARG ARG SEQRES 2 A 431 HIS ILE TRP HIS PRO TYR THR SER MET THR SER PRO LEU SEQRES 3 A 431 PRO VAL PHE PRO VAL GLU ARG ALA GLU GLY CYS GLU LEU SEQRES 4 A 431 ILE LEU SER GLY GLY GLU ARG LEU VAL ASP GLY MET SER SEQRES 5 A 431 SER TRP TRP ALA ALA ILE HIS GLY TYR ASN HIS PRO GLN SEQRES 6 A 431 LEU ASN ALA ALA MET LYS THR GLN ILE ASP ALA MET SER SEQRES 7 A 431 HIS VAL MET PHE GLY GLY ILE THR HIS ALA PRO ALA ILE SEQRES 8 A 431 GLU LEU CYS ARG LYS LEU VAL ALA MET THR PRO ALA PRO SEQRES 9 A 431 LEU GLU CYS VAL PHE LEU ALA ASP SER GLY SER VAL ALA SEQRES 10 A 431 VAL GLU VAL ALA MET LYS MET ALA LEU GLN TYR TRP GLN SEQRES 11 A 431 ALA LYS GLY GLU SER ARG GLN ARG PHE LEU THR PHE ARG SEQRES 12 A 431 ASN GLY TYR HIS GLY ASP THR PHE GLY ALA MET SER VAL SEQRES 13 A 431 CYS ASP PRO HIS ASN SER MET HIS SER LEU TRP LYS GLY SEQRES 14 A 431 TYR LEU ALA GLU ASN LEU PHE ALA PRO ALA PRO GLN SER SEQRES 15 A 431 ARG MET GLY GLY GLU TRP ASP GLU ARG ASP MET VAL ALA SEQRES 16 A 431 PHE ALA ARG LEU MET ALA ALA HIS ARG HIS GLU ILE ALA SEQRES 17 A 431 ALA VAL ILE LEU GLU PRO ILE VAL GLN GLY ALA GLY GLY SEQRES 18 A 431 MET ARG ILE TYR HIS PRO GLN TRP LEU GLN ARG ILE ARG SEQRES 19 A 431 GLN MET CYS ASP ARG GLU GLY ILE LEU LEU ILE ALA ASP SEQRES 20 A 431 GLU ILE ALA THR GLY PHE GLY ARG THR GLY ARG LEU PHE SEQRES 21 A 431 ALA CYS GLU HIS ALA GLY ILE ALA PRO ASP ILE LEU CYS SEQRES 22 A 431 LEU GLY LLP ALA LEU THR GLY GLY THR MET THR LEU SER SEQRES 23 A 431 ALA THR LEU THR SER ARG GLN VAL ALA GLU THR ILE SER SEQRES 24 A 431 ASN GLY GLU ALA GLY CYS PHE MET HIS GLY PRO THR PHE SEQRES 25 A 431 MET GLY ASN PRO LEU ALA CYS ALA VAL ALA ASN ALA SER SEQRES 26 A 431 LEU THR LEU LEU GLU SER GLY ASP TRP ARG ARG GLN VAL SEQRES 27 A 431 ALA ALA ILE GLU ALA GLN LEU ARG GLU GLU LEU ALA PRO SEQRES 28 A 431 ALA ALA ASP SER PRO GLN VAL ALA ASP VAL ARG VAL LEU SEQRES 29 A 431 GLY ALA ILE GLY VAL VAL GLU THR THR ARG PRO VAL ASN SEQRES 30 A 431 ILE ALA ALA LEU GLN GLN PHE PHE VAL ARG GLN GLY VAL SEQRES 31 A 431 TRP VAL ARG PRO PHE GLY LYS LEU ILE TYR LEU MET PRO SEQRES 32 A 431 PRO TYR ILE ILE GLN PRO GLU GLN LEU ARG ARG LEU THR SEQRES 33 A 431 GLN ALA VAL ASN GLU ALA VAL ARG GLU GLU THR PHE PHE SEQRES 34 A 431 SER VAL MODRES 5UC7 LLP A 274 LYS MODIFIED RESIDUE HET LLP A 274 24 HET TAR A 501 10 HET TAR A 502 10 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM TAR D(-)-TARTARIC ACID HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP C14 H22 N3 O7 P FORMUL 2 TAR 2(C4 H6 O6) FORMUL 4 HOH *450(H2 O) HELIX 1 AA1 THR A 2 ILE A 13 1 12 HELIX 2 AA2 HIS A 61 MET A 75 1 15 HELIX 3 AA3 HIS A 85 THR A 99 1 15 HELIX 4 AA4 SER A 111 LYS A 130 1 20 HELIX 5 AA5 THR A 148 SER A 153 1 6 HELIX 6 AA6 MET A 161 LYS A 166 1 6 HELIX 7 AA7 ASP A 187 HIS A 201 1 15 HELIX 8 AA8 PRO A 225 GLY A 239 1 15 HELIX 9 AA9 PHE A 258 ALA A 263 5 6 HELIX 10 AB1 GLY A 273 GLY A 278 5 6 HELIX 11 AB2 ARG A 290 GLY A 299 1 10 HELIX 12 AB3 ASN A 313 GLU A 328 1 16 HELIX 13 AB4 GLY A 330 ALA A 348 1 19 HELIX 14 AB5 PRO A 349 SER A 353 5 5 HELIX 15 AB6 ASN A 375 GLN A 386 1 12 HELIX 16 AB7 GLN A 406 VAL A 421 1 16 HELIX 17 AB8 ARG A 422 PHE A 427 5 6 SHEET 1 AA1 4 VAL A 29 GLU A 33 0 SHEET 2 AA1 4 GLU A 36 LEU A 39 -1 O ILE A 38 N ARG A 31 SHEET 3 AA1 4 ARG A 44 ASP A 47 -1 O LEU A 45 N LEU A 37 SHEET 4 AA1 4 VAL A 388 TRP A 389 1 O TRP A 389 N VAL A 46 SHEET 1 AA2 7 LEU A 103 ALA A 109 0 SHEET 2 AA2 7 SER A 284 SER A 289 -1 O THR A 286 N PHE A 107 SHEET 3 AA2 7 ILE A 269 LEU A 272 -1 N LEU A 272 O ALA A 285 SHEET 4 AA2 7 LEU A 241 ASP A 245 1 N ALA A 244 O ILE A 269 SHEET 5 AA2 7 ILE A 205 LEU A 210 1 N LEU A 210 O ASP A 245 SHEET 6 AA2 7 ARG A 136 PHE A 140 1 N ARG A 136 O ALA A 206 SHEET 7 AA2 7 LEU A 173 ALA A 175 1 O ALA A 175 N THR A 139 SHEET 1 AA3 2 VAL A 214 GLN A 215 0 SHEET 2 AA3 2 ARG A 221 ILE A 222 -1 O ARG A 221 N GLN A 215 SHEET 1 AA4 3 VAL A 356 LEU A 362 0 SHEET 2 AA4 3 ILE A 365 THR A 370 -1 O GLU A 369 N ALA A 357 SHEET 3 AA4 3 LEU A 396 LEU A 399 -1 O ILE A 397 N VAL A 368 LINK C GLY A 273 N LLP A 274 1555 1555 1.33 LINK C LLP A 274 N ALA A 275 1555 1555 1.34 SITE 1 AC1 7 ARG A 11 HIS A 12 GLU A 104 ARG A 290 SITE 2 AC1 7 HOH A 668 HOH A 827 HOH A 839 SITE 1 AC2 9 TRP A 52 TRP A 53 TYR A 144 LLP A 274 SITE 2 AC2 9 GLY A 307 PRO A 308 THR A 309 HOH A 611 SITE 3 AC2 9 HOH A 715 CRYST1 75.369 88.306 63.274 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013268 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011324 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015804 0.00000