PDB Short entry for 5UDL HEADER RNA BINDING PROTEIN 27-DEC-16 5UDL TITLE IFIT1 N216A MONOMERIC MUTANT (L457E/L464E) WITH M7GPPP-AAAA (ANTI TITLE 2 CONFORMATION OF CAP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS COMPND 3 1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: IFIT-1,INTERFERON-INDUCED 56 KDA PROTEIN,P56; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RNA (5'-D(*(GTA))-R(P*AP*AP*A)-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IFIT1, G10P1, IFI56, IFNAI1, ISG56; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 11 ORGANISM_TAXID: 32644 KEYWDS MRNA CAP, N7-METHYLGUANOSINE-TRIPHOSPHATE RNA, TETRATRICOPEPTIDE KEYWDS 2 REPEAT, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.M.ABBAS,S.MARTINEZ-MONTERO,M.J.DAMHA,B.NAGAR REVDAT 5 06-MAR-24 5UDL 1 LINK REVDAT 4 08-JAN-20 5UDL 1 REMARK REVDAT 3 22-MAR-17 5UDL 1 JRNL REVDAT 2 15-MAR-17 5UDL 1 JRNL REVDAT 1 01-MAR-17 5UDL 0 JRNL AUTH Y.M.ABBAS,B.T.LAUDENBACH,S.MARTINEZ-MONTERO,R.CENCIC, JRNL AUTH 2 M.HABJAN,A.PICHLMAIR,M.J.DAMHA,J.PELLETIER,B.NAGAR JRNL TITL STRUCTURE OF HUMAN IFIT1 WITH CAPPED RNA REVEALS ADAPTABLE JRNL TITL 2 MRNA BINDING AND MECHANISMS FOR SENSING N1 AND N2 RIBOSE JRNL TITL 3 2'-O METHYLATIONS. JRNL REF PROC. NATL. ACAD. SCI. V. 114 E2106 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28251928 JRNL DOI 10.1073/PNAS.1612444114 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2142 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 71790 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3547 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.0862 - 4.8024 1.00 2981 165 0.1680 0.1749 REMARK 3 2 4.8024 - 3.8128 1.00 2828 157 0.1345 0.1461 REMARK 3 3 3.8128 - 3.3311 1.00 2796 145 0.1606 0.1720 REMARK 3 4 3.3311 - 3.0266 1.00 2744 163 0.1820 0.1779 REMARK 3 5 3.0266 - 2.8098 1.00 2763 147 0.1774 0.1896 REMARK 3 6 2.8098 - 2.6441 1.00 2769 137 0.1611 0.1765 REMARK 3 7 2.6441 - 2.5117 1.00 2742 141 0.1543 0.1738 REMARK 3 8 2.5117 - 2.4024 1.00 2764 127 0.1508 0.1902 REMARK 3 9 2.4024 - 2.3099 1.00 2723 134 0.1472 0.1796 REMARK 3 10 2.3099 - 2.2302 1.00 2756 127 0.1498 0.1708 REMARK 3 11 2.2302 - 2.1605 1.00 2715 146 0.1507 0.1589 REMARK 3 12 2.1605 - 2.0987 1.00 2733 135 0.1588 0.1919 REMARK 3 13 2.0987 - 2.0435 1.00 2724 149 0.1612 0.1772 REMARK 3 14 2.0435 - 1.9936 1.00 2669 166 0.1676 0.1964 REMARK 3 15 1.9936 - 1.9483 1.00 2743 128 0.1725 0.2039 REMARK 3 16 1.9483 - 1.9069 1.00 2693 137 0.1729 0.2174 REMARK 3 17 1.9069 - 1.8687 1.00 2706 145 0.1750 0.2392 REMARK 3 18 1.8687 - 1.8335 1.00 2706 117 0.1750 0.2144 REMARK 3 19 1.8335 - 1.8007 1.00 2703 147 0.1858 0.2311 REMARK 3 20 1.8007 - 1.7702 1.00 2715 147 0.1967 0.2358 REMARK 3 21 1.7702 - 1.7416 1.00 2704 121 0.1989 0.2238 REMARK 3 22 1.7416 - 1.7148 1.00 2689 154 0.2033 0.2222 REMARK 3 23 1.7148 - 1.6896 1.00 2715 128 0.2215 0.2704 REMARK 3 24 1.6896 - 1.6658 1.00 2671 137 0.2420 0.2776 REMARK 3 25 1.6658 - 1.6433 0.92 2491 147 0.2433 0.2462 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4039 REMARK 3 ANGLE : 1.005 5469 REMARK 3 CHIRALITY : 0.048 585 REMARK 3 PLANARITY : 0.006 688 REMARK 3 DIHEDRAL : 13.584 2492 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.0292 18.3292-159.9563 REMARK 3 T TENSOR REMARK 3 T11: 0.1675 T22: 0.1952 REMARK 3 T33: 0.2027 T12: -0.0052 REMARK 3 T13: -0.0131 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.0682 L22: 0.1379 REMARK 3 L33: 0.0611 L12: 0.1139 REMARK 3 L13: 0.0312 L23: -0.0932 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: 0.0944 S13: 0.0070 REMARK 3 S21: -0.0441 S22: -0.0061 S23: -0.0476 REMARK 3 S31: -0.0323 S32: 0.0764 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.8471 28.5227-155.3213 REMARK 3 T TENSOR REMARK 3 T11: 0.2099 T22: 0.1713 REMARK 3 T33: 0.2553 T12: -0.0047 REMARK 3 T13: -0.0148 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.2058 L22: 0.1580 REMARK 3 L33: 0.1317 L12: 0.0941 REMARK 3 L13: 0.0569 L23: -0.0510 REMARK 3 S TENSOR REMARK 3 S11: -0.0553 S12: 0.0091 S13: 0.1753 REMARK 3 S21: -0.0423 S22: 0.0046 S23: 0.0503 REMARK 3 S31: -0.1262 S32: -0.0875 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.2903 6.0260-152.9390 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.1494 REMARK 3 T33: 0.1570 T12: 0.0185 REMARK 3 T13: -0.0038 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.2007 L22: 0.3599 REMARK 3 L33: 0.4535 L12: 0.2253 REMARK 3 L13: -0.0540 L23: -0.0520 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: -0.0124 S13: -0.0091 REMARK 3 S21: 0.0435 S22: 0.0068 S23: -0.0038 REMARK 3 S31: 0.0267 S32: -0.0274 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3776 -7.4288-175.9427 REMARK 3 T TENSOR REMARK 3 T11: 0.2308 T22: 0.2006 REMARK 3 T33: 0.1828 T12: -0.0235 REMARK 3 T13: -0.0130 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.0793 L22: 0.0347 REMARK 3 L33: 0.0308 L12: -0.0562 REMARK 3 L13: 0.0013 L23: -0.0193 REMARK 3 S TENSOR REMARK 3 S11: 0.0024 S12: 0.0763 S13: 0.0185 REMARK 3 S21: 0.0137 S22: -0.0380 S23: 0.1086 REMARK 3 S31: 0.1032 S32: -0.0481 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 312 THROUGH 335 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9382 -2.0097-181.7064 REMARK 3 T TENSOR REMARK 3 T11: 0.2084 T22: 0.2344 REMARK 3 T33: 0.1619 T12: -0.0371 REMARK 3 T13: 0.0066 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 0.0325 L22: 0.0534 REMARK 3 L33: 0.0560 L12: -0.0530 REMARK 3 L13: 0.0020 L23: -0.0140 REMARK 3 S TENSOR REMARK 3 S11: -0.1565 S12: 0.1228 S13: 0.0628 REMARK 3 S21: -0.0249 S22: 0.0910 S23: 0.0328 REMARK 3 S31: -0.0140 S32: -0.0867 S33: -0.0002 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 336 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7311 -5.1456-177.4852 REMARK 3 T TENSOR REMARK 3 T11: 0.2225 T22: 0.2186 REMARK 3 T33: 0.1746 T12: 0.0158 REMARK 3 T13: -0.0020 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 0.0503 L22: 0.0432 REMARK 3 L33: 0.0047 L12: -0.0367 REMARK 3 L13: -0.0123 L23: 0.0093 REMARK 3 S TENSOR REMARK 3 S11: -0.0583 S12: 0.0625 S13: 0.0992 REMARK 3 S21: -0.0652 S22: 0.0597 S23: -0.0046 REMARK 3 S31: 0.1127 S32: 0.0905 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 374 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.8116 -16.7919-173.1317 REMARK 3 T TENSOR REMARK 3 T11: 0.2793 T22: 0.2451 REMARK 3 T33: 0.2231 T12: 0.0842 REMARK 3 T13: -0.0163 T23: -0.0544 REMARK 3 L TENSOR REMARK 3 L11: 0.1052 L22: 0.0936 REMARK 3 L33: 0.0620 L12: -0.0128 REMARK 3 L13: -0.0029 L23: -0.0855 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: 0.0558 S13: -0.1007 REMARK 3 S21: 0.0836 S22: 0.0719 S23: -0.0326 REMARK 3 S31: 0.2330 S32: 0.0457 S33: 0.0108 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 413 THROUGH 467 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8309 -32.8724-169.9886 REMARK 3 T TENSOR REMARK 3 T11: 0.3429 T22: 0.2226 REMARK 3 T33: 0.3876 T12: 0.0083 REMARK 3 T13: -0.1283 T23: -0.0668 REMARK 3 L TENSOR REMARK 3 L11: 0.0189 L22: 0.2837 REMARK 3 L33: 0.6199 L12: 0.0266 REMARK 3 L13: 0.0050 L23: -0.0935 REMARK 3 S TENSOR REMARK 3 S11: 0.3035 S12: -0.0727 S13: -0.3085 REMARK 3 S21: -0.1010 S22: 0.0125 S23: 0.1758 REMARK 3 S31: 0.2051 S32: -0.2384 S33: 0.1883 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 4 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2521 -4.3681-165.1214 REMARK 3 T TENSOR REMARK 3 T11: 0.2537 T22: 0.2164 REMARK 3 T33: 0.1979 T12: -0.0144 REMARK 3 T13: 0.0087 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: -0.0000 L22: 0.0108 REMARK 3 L33: 0.0076 L12: -0.0021 REMARK 3 L13: 0.0039 L23: 0.0062 REMARK 3 S TENSOR REMARK 3 S11: -0.0295 S12: -0.1206 S13: -0.0185 REMARK 3 S21: 0.0453 S22: 0.0309 S23: 0.0822 REMARK 3 S31: 0.1663 S32: 0.1374 S33: 0.0002 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND RESID ' 1 ' REMARK 3 ORIGIN FOR THE GROUP (A): 34.3685 8.3985-159.4705 REMARK 3 T TENSOR REMARK 3 T11: 0.2024 T22: 0.1801 REMARK 3 T33: 0.2050 T12: 0.0270 REMARK 3 T13: -0.0121 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.2989 L22: 0.0425 REMARK 3 L33: 0.2153 L12: 0.0800 REMARK 3 L13: -0.2148 L23: -0.0428 REMARK 3 S TENSOR REMARK 3 S11: -0.2533 S12: 0.1304 S13: 0.0046 REMARK 3 S21: 0.0568 S22: 0.2188 S23: -0.0512 REMARK 3 S31: 0.0073 S32: -0.1149 S33: -0.0146 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UDL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225700. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 94 REMARK 200 PH : 8.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71832 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.60 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.30 REMARK 200 R MERGE FOR SHELL (I) : 0.89100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27 - 32 % PEG 200, 0.1 M TRIS PH 8.1, REMARK 280 200 MM CACL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z+1/2 REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.49600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.49600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 46.49600 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 46.49600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 717 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 845 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 888 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 ASP A 6 REMARK 465 ASP A 7 REMARK 465 ALA A 468 REMARK 465 ASP A 469 REMARK 465 PHE A 470 REMARK 465 GLU A 471 REMARK 465 ASN A 472 REMARK 465 SER A 473 REMARK 465 VAL A 474 REMARK 465 ARG A 475 REMARK 465 GLN A 476 REMARK 465 GLY A 477 REMARK 465 PRO A 478 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 211 O HOH A 607 1.55 REMARK 500 O HOH B 102 O HOH B 109 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 67 68.79 -118.40 REMARK 500 ASP A 87 48.72 70.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 OD1 REMARK 620 2 ASP A 47 OD2 51.8 REMARK 620 3 HOH A 624 O 106.8 77.2 REMARK 620 4 HOH A 672 O 84.8 95.5 156.4 REMARK 620 5 HOH A 734 O 69.9 111.4 89.9 113.6 REMARK 620 6 HOH A 866 O 151.1 154.8 82.5 97.2 83.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 77 OE1 REMARK 620 2 GLU A 77 OE2 46.2 REMARK 620 3 HOH A 837 O 81.6 124.1 REMARK 620 4 HOH A 846 O 84.5 103.9 85.8 REMARK 620 5 HOH A 887 O 148.5 165.1 70.2 79.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UDI RELATED DB: PDB REMARK 900 RELATED ID: 5UDJ RELATED DB: PDB REMARK 900 RELATED ID: 5UDK RELATED DB: PDB DBREF 5UDL A 1 478 UNP P09914 IFIT1_HUMAN 1 478 DBREF 5UDL B 1 4 PDB 5UDL 5UDL 1 4 SEQADV 5UDL SER A 0 UNP P09914 EXPRESSION TAG SEQADV 5UDL ALA A 216 UNP P09914 ASN 216 ENGINEERED MUTATION SEQADV 5UDL GLU A 457 UNP P09914 LEU 457 ENGINEERED MUTATION SEQADV 5UDL GLU A 464 UNP P09914 LEU 464 ENGINEERED MUTATION SEQRES 1 A 479 SER MET SER THR ASN GLY ASP ASP HIS GLN VAL LYS ASP SEQRES 2 A 479 SER LEU GLU GLN LEU ARG CYS HIS PHE THR TRP GLU LEU SEQRES 3 A 479 SER ILE ASP ASP ASP GLU MET PRO ASP LEU GLU ASN ARG SEQRES 4 A 479 VAL LEU ASP GLN ILE GLU PHE LEU ASP THR LYS TYR SER SEQRES 5 A 479 VAL GLY ILE HIS ASN LEU LEU ALA TYR VAL LYS HIS LEU SEQRES 6 A 479 LYS GLY GLN ASN GLU GLU ALA LEU LYS SER LEU LYS GLU SEQRES 7 A 479 ALA GLU ASN LEU MET GLN GLU GLU HIS ASP ASN GLN ALA SEQRES 8 A 479 ASN VAL ARG SER LEU VAL THR TRP GLY ASN PHE ALA TRP SEQRES 9 A 479 MET TYR TYR HIS MET GLY ARG LEU ALA GLU ALA GLN THR SEQRES 10 A 479 TYR LEU ASP LYS VAL GLU ASN ILE CYS LYS LYS LEU SER SEQRES 11 A 479 ASN PRO PHE ARG TYR ARG MET GLU CYS PRO GLU ILE ASP SEQRES 12 A 479 CYS GLU GLU GLY TRP ALA LEU LEU LYS CYS GLY GLY LYS SEQRES 13 A 479 ASN TYR GLU ARG ALA LYS ALA CYS PHE GLU LYS VAL LEU SEQRES 14 A 479 GLU VAL ASP PRO GLU ASN PRO GLU SER SER ALA GLY TYR SEQRES 15 A 479 ALA ILE SER ALA TYR ARG LEU ASP GLY PHE LYS LEU ALA SEQRES 16 A 479 THR LYS ASN HIS LYS PRO PHE SER LEU LEU PRO LEU ARG SEQRES 17 A 479 GLN ALA VAL ARG LEU ASN PRO ASP ALA GLY TYR ILE LYS SEQRES 18 A 479 VAL LEU LEU ALA LEU LYS LEU GLN ASP GLU GLY GLN GLU SEQRES 19 A 479 ALA GLU GLY GLU LYS TYR ILE GLU GLU ALA LEU ALA ASN SEQRES 20 A 479 MET SER SER GLN THR TYR VAL PHE ARG TYR ALA ALA LYS SEQRES 21 A 479 PHE TYR ARG ARG LYS GLY SER VAL ASP LYS ALA LEU GLU SEQRES 22 A 479 LEU LEU LYS LYS ALA LEU GLN GLU THR PRO THR SER VAL SEQRES 23 A 479 LEU LEU HIS HIS GLN ILE GLY LEU CYS TYR LYS ALA GLN SEQRES 24 A 479 MET ILE GLN ILE LYS GLU ALA THR LYS GLY GLN PRO ARG SEQRES 25 A 479 GLY GLN ASN ARG GLU LYS LEU ASP LYS MET ILE ARG SER SEQRES 26 A 479 ALA ILE PHE HIS PHE GLU SER ALA VAL GLU LYS LYS PRO SEQRES 27 A 479 THR PHE GLU VAL ALA HIS LEU ASP LEU ALA ARG MET TYR SEQRES 28 A 479 ILE GLU ALA GLY ASN HIS ARG LYS ALA GLU GLU ASN PHE SEQRES 29 A 479 GLN LYS LEU LEU CYS MET LYS PRO VAL VAL GLU GLU THR SEQRES 30 A 479 MET GLN ASP ILE HIS PHE HIS TYR GLY ARG PHE GLN GLU SEQRES 31 A 479 PHE GLN LYS LYS SER ASP VAL ASN ALA ILE ILE HIS TYR SEQRES 32 A 479 LEU LYS ALA ILE LYS ILE GLU GLN ALA SER LEU THR ARG SEQRES 33 A 479 ASP LYS SER ILE ASN SER LEU LYS LYS LEU VAL LEU ARG SEQRES 34 A 479 LYS LEU ARG ARG LYS ALA LEU ASP LEU GLU SER LEU SER SEQRES 35 A 479 LEU LEU GLY PHE VAL TYR LYS LEU GLU GLY ASN MET ASN SEQRES 36 A 479 GLU ALA GLU GLU TYR TYR GLU ARG ALA GLU ARG LEU ALA SEQRES 37 A 479 ALA ASP PHE GLU ASN SER VAL ARG GLN GLY PRO SEQRES 1 B 4 GTA A A A HET GTA B 1 78 HET PGE A 501 24 HET CA A 502 1 HET CA A 503 1 HETNAM GTA P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE HETNAM PGE TRIETHYLENE GLYCOL HETNAM CA CALCIUM ION HETSYN GTA 7-METHYL-GPPPA FORMUL 2 GTA C21 H30 N10 O17 P3 1+ FORMUL 3 PGE C6 H14 O4 FORMUL 4 CA 2(CA 2+) FORMUL 6 HOH *313(H2 O) HELIX 1 AA1 HIS A 8 GLU A 15 1 8 HELIX 2 AA2 CYS A 19 TRP A 23 5 5 HELIX 3 AA3 ASP A 28 ASP A 30 5 3 HELIX 4 AA4 GLU A 31 LEU A 46 1 16 HELIX 5 AA5 SER A 51 LYS A 65 1 15 HELIX 6 AA6 GLN A 67 HIS A 86 1 20 HELIX 7 AA7 ARG A 93 GLY A 109 1 17 HELIX 8 AA8 ARG A 110 LEU A 128 1 19 HELIX 9 AA9 CYS A 138 CYS A 152 1 15 HELIX 10 AB1 GLY A 153 LYS A 155 5 3 HELIX 11 AB2 ASN A 156 GLU A 169 1 14 HELIX 12 AB3 ASN A 174 LYS A 192 1 19 HELIX 13 AB4 SER A 202 ASN A 213 1 12 HELIX 14 AB5 ALA A 216 GLU A 230 1 15 HELIX 15 AB6 GLN A 232 ALA A 245 1 14 HELIX 16 AB7 SER A 249 GLY A 265 1 17 HELIX 17 AB8 SER A 266 THR A 281 1 16 HELIX 18 AB9 SER A 284 THR A 306 1 23 HELIX 19 AC1 ARG A 311 LYS A 336 1 26 HELIX 20 AC2 PHE A 339 GLY A 354 1 16 HELIX 21 AC3 ASN A 355 CYS A 368 1 14 HELIX 22 AC4 GLU A 375 GLN A 391 1 17 HELIX 23 AC5 SER A 394 ILE A 408 1 15 HELIX 24 AC6 SER A 412 LYS A 433 1 22 HELIX 25 AC7 ASP A 436 GLY A 451 1 16 HELIX 26 AC8 ASN A 452 ALA A 467 1 16 LINK O3B GTA B 1 P A B 2 1555 1555 1.59 LINK OD1 ASP A 47 CA CA A 502 1555 1555 2.52 LINK OD2 ASP A 47 CA CA A 502 1555 1555 2.55 LINK OE1 GLU A 77 CA CA A 503 1555 1555 2.52 LINK OE2 GLU A 77 CA CA A 503 1555 1555 2.99 LINK CA CA A 502 O HOH A 624 1555 1555 2.43 LINK CA CA A 502 O HOH A 672 1555 7551 2.20 LINK CA CA A 502 O HOH A 734 1555 1555 2.33 LINK CA CA A 502 O HOH A 866 1555 7551 2.32 LINK CA CA A 503 O HOH A 837 1555 1555 2.42 LINK CA CA A 503 O HOH A 846 1555 1555 2.70 LINK CA CA A 503 O HOH A 887 1555 1555 2.25 SITE 1 AC1 3 HIS A 63 HOH A 665 HOH A 843 SITE 1 AC2 3 ASP A 47 HOH A 624 HOH A 734 SITE 1 AC3 4 GLU A 77 HOH A 837 HOH A 846 HOH A 887 CRYST1 111.760 111.760 92.992 90.00 90.00 90.00 P 42 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008948 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008948 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010754 0.00000