PDB Short entry for 5UKW HEADER OXIDOREDUCTASE 23-JAN-17 5UKW TITLE CRYSTAL STRUCTURE OF HUMAN GLUCOSE 6-PHOSPHATE DEHYDROGENASE MUTANT TITLE 2 (A277C) COMPLEXED WITH G6P COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 59-541; COMPND 5 SYNONYM: G6PD; COMPND 6 EC: 1.1.1.49; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: G6PD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-SUMO KEYWDS DEHYDROGENASE, A277C, TETRAMER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.T.RANZANI,A.T.CORDEIRO REVDAT 6 04-OCT-23 5UKW 1 HETSYN REVDAT 5 29-JUL-20 5UKW 1 COMPND REMARK HETNAM SITE REVDAT 4 01-JAN-20 5UKW 1 REMARK REVDAT 3 17-APR-19 5UKW 1 REMARK REVDAT 2 10-MAY-17 5UKW 1 JRNL REVDAT 1 19-APR-17 5UKW 0 JRNL AUTH A.T.RANZANI,A.T.CORDEIRO JRNL TITL MUTATIONS IN THE TETRAMER INTERFACE OF HUMAN JRNL TITL 2 GLUCOSE-6-PHOSPHATE DEHYDROGENASE REVEALS KINETIC JRNL TITL 3 DIFFERENCES BETWEEN OLIGOMERIC STATES. JRNL REF FEBS LETT. V. 591 1278 2017 JRNL REFN ISSN 1873-3468 JRNL PMID 28370139 JRNL DOI 10.1002/1873-3468.12638 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 839 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1183 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3862 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 20 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.07000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -2.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.531 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.311 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3975 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3766 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5370 ; 1.644 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8654 ; 3.595 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 474 ; 5.903 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 201 ;37.640 ;23.632 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 690 ;20.132 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.493 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 575 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4474 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 960 ; 0.008 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1902 ; 3.816 ; 5.634 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1901 ; 3.815 ; 5.632 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2374 ; 5.818 ; 8.442 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2375 ; 5.817 ; 8.444 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2072 ; 4.273 ; 6.058 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2072 ; 4.271 ; 6.058 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2997 ; 6.688 ; 8.907 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 16543 ;10.410 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 16543 ;10.410 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5UKW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000226045. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97643 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16889 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 46.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.15400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 1.53200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2BH9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS-HCL PH 9, 200 MM MGCL2, REMARK 280 13% PEG 4000 AND 20% GLYCEROL, PH 9.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 88.90850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 108.23500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 88.90850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 108.23500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 88.90850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.23500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 88.90850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 108.23500 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 108.23500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 108.23500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 108.23500 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 108.23500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 88.90850 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 88.90850 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 88.90850 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 29.54950 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 88.90850 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 88.90850 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 108.23500 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 29.54950 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 108.23500 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 29.54950 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 88.90850 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 24 REMARK 465 GLY A 25 REMARK 465 SER A 26 REMARK 465 GLU A 27 REMARK 465 GLU A 315 REMARK 465 GLY A 505 REMARK 465 THR A 506 REMARK 465 TYR A 507 REMARK 465 LYS A 508 REMARK 465 TRP A 509 REMARK 465 VAL A 510 REMARK 465 ASN A 511 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 719 O HOH A 719 11555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 47 -49.28 -131.34 REMARK 500 ASN A 64 74.06 -106.11 REMARK 500 HIS A 129 112.19 -39.51 REMARK 500 ARG A 246 43.47 -90.32 REMARK 500 PHE A 253 -62.33 -107.34 REMARK 500 ASN A 262 -71.36 -116.65 REMARK 500 ASN A 397 75.94 48.90 REMARK 500 SER A 418 -167.78 -162.10 REMARK 500 LYS A 476 58.68 30.40 REMARK 500 REMARK 500 REMARK: NULL DBREF 5UKW A 29 511 UNP P11413 G6PD_HUMAN 59 541 SEQADV 5UKW GLY A 24 UNP P11413 EXPRESSION TAG SEQADV 5UKW GLY A 25 UNP P11413 EXPRESSION TAG SEQADV 5UKW SER A 26 UNP P11413 EXPRESSION TAG SEQADV 5UKW GLU A 27 UNP P11413 EXPRESSION TAG SEQADV 5UKW PHE A 28 UNP P11413 EXPRESSION TAG SEQADV 5UKW CYS A 277 UNP P11413 ALA 307 ENGINEERED MUTATION SEQRES 1 A 488 GLY GLY SER GLU PHE SER ASP THR HIS ILE PHE ILE ILE SEQRES 2 A 488 MET GLY ALA SER GLY ASP LEU ALA LYS LYS LYS ILE TYR SEQRES 3 A 488 PRO THR ILE TRP TRP LEU PHE ARG ASP GLY LEU LEU PRO SEQRES 4 A 488 GLU ASN THR PHE ILE VAL GLY TYR ALA ARG SER ARG LEU SEQRES 5 A 488 THR VAL ALA ASP ILE ARG LYS GLN SER GLU PRO PHE PHE SEQRES 6 A 488 LYS ALA THR PRO GLU GLU LYS LEU LYS LEU GLU ASP PHE SEQRES 7 A 488 PHE ALA ARG ASN SER TYR VAL ALA GLY GLN TYR ASP ASP SEQRES 8 A 488 ALA ALA SER TYR GLN ARG LEU ASN SER HIS MET ASN ALA SEQRES 9 A 488 LEU HIS LEU GLY SER GLN ALA ASN ARG LEU PHE TYR LEU SEQRES 10 A 488 ALA LEU PRO PRO THR VAL TYR GLU ALA VAL THR LYS ASN SEQRES 11 A 488 ILE HIS GLU SER CYS MET SER GLN ILE GLY TRP ASN ARG SEQRES 12 A 488 ILE ILE VAL GLU LYS PRO PHE GLY ARG ASP LEU GLN SER SEQRES 13 A 488 SER ASP ARG LEU SER ASN HIS ILE SER SER LEU PHE ARG SEQRES 14 A 488 GLU ASP GLN ILE TYR ARG ILE ASP HIS TYR LEU GLY LYS SEQRES 15 A 488 GLU MET VAL GLN ASN LEU MET VAL LEU ARG PHE ALA ASN SEQRES 16 A 488 ARG ILE PHE GLY PRO ILE TRP ASN ARG ASP ASN ILE ALA SEQRES 17 A 488 CYS VAL ILE LEU THR PHE LYS GLU PRO PHE GLY THR GLU SEQRES 18 A 488 GLY ARG GLY GLY TYR PHE ASP GLU PHE GLY ILE ILE ARG SEQRES 19 A 488 ASP VAL MET GLN ASN HIS LEU LEU GLN MET LEU CYS LEU SEQRES 20 A 488 VAL ALA MET GLU LYS PRO CYS SER THR ASN SER ASP ASP SEQRES 21 A 488 VAL ARG ASP GLU LYS VAL LYS VAL LEU LYS CYS ILE SER SEQRES 22 A 488 GLU VAL GLN ALA ASN ASN VAL VAL LEU GLY GLN TYR VAL SEQRES 23 A 488 GLY ASN PRO ASP GLY GLU GLY GLU ALA THR LYS GLY TYR SEQRES 24 A 488 LEU ASP ASP PRO THR VAL PRO ARG GLY SER THR THR ALA SEQRES 25 A 488 THR PHE ALA ALA VAL VAL LEU TYR VAL GLU ASN GLU ARG SEQRES 26 A 488 TRP ASP GLY VAL PRO PHE ILE LEU ARG CYS GLY LYS ALA SEQRES 27 A 488 LEU ASN GLU ARG LYS ALA GLU VAL ARG LEU GLN PHE HIS SEQRES 28 A 488 ASP VAL ALA GLY ASP ILE PHE HIS GLN GLN CYS LYS ARG SEQRES 29 A 488 ASN GLU LEU VAL ILE ARG VAL GLN PRO ASN GLU ALA VAL SEQRES 30 A 488 TYR THR LYS MET MET THR LYS LYS PRO GLY MET PHE PHE SEQRES 31 A 488 ASN PRO GLU GLU SER GLU LEU ASP LEU THR TYR GLY ASN SEQRES 32 A 488 ARG TYR LYS ASN VAL LYS LEU PRO ASP ALA TYR GLU ARG SEQRES 33 A 488 LEU ILE LEU ASP VAL PHE CYS GLY SER GLN MET HIS PHE SEQRES 34 A 488 VAL ARG SER ASP GLU LEU ARG GLU ALA TRP ARG ILE PHE SEQRES 35 A 488 THR PRO LEU LEU HIS GLN ILE GLU LEU GLU LYS PRO LYS SEQRES 36 A 488 PRO ILE PRO TYR ILE TYR GLY SER ARG GLY PRO THR GLU SEQRES 37 A 488 ALA ASP GLU LEU MET LYS ARG VAL GLY PHE GLN TYR GLU SEQRES 38 A 488 GLY THR TYR LYS TRP VAL ASN HET BG6 A 601 16 HET GOL A 602 6 HETNAM BG6 6-O-PHOSPHONO-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETSYN BG6 BETA-D-GLUCOSE-6-PHOSPHATE; 6-O-PHOSPHONO-BETA-D- HETSYN 2 BG6 GLUCOSE; 6-O-PHOSPHONO-D-GLUCOSE; 6-O-PHOSPHONO- HETSYN 3 BG6 GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 BG6 C6 H13 O9 P FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *20(H2 O) HELIX 1 AA1 GLY A 41 LYS A 47 1 7 HELIX 2 AA2 LYS A 47 ASP A 58 1 12 HELIX 3 AA3 THR A 76 GLU A 85 1 10 HELIX 4 AA4 PRO A 86 LYS A 89 5 4 HELIX 5 AA5 THR A 91 GLU A 93 5 3 HELIX 6 AA6 GLU A 94 ARG A 104 1 11 HELIX 7 AA7 ASP A 114 ALA A 127 1 14 HELIX 8 AA8 PRO A 143 THR A 145 5 3 HELIX 9 AA9 VAL A 146 CYS A 158 1 13 HELIX 10 AB1 ASP A 176 PHE A 191 1 16 HELIX 11 AB2 ARG A 192 ASP A 194 5 3 HELIX 12 AB3 ASP A 200 GLY A 204 5 5 HELIX 13 AB4 LYS A 205 ASN A 218 1 14 HELIX 14 AB5 ARG A 246 GLU A 252 1 7 HELIX 15 AB6 GLY A 254 MET A 260 1 7 HELIX 16 AB7 ASN A 262 MET A 273 1 12 HELIX 17 AB8 ASN A 280 CYS A 294 1 15 HELIX 18 AB9 GLN A 299 ASN A 301 5 3 HELIX 19 AC1 GLY A 316 LYS A 320 5 5 HELIX 20 AC2 ASP A 435 GLY A 447 1 13 HELIX 21 AC3 ARG A 454 LYS A 476 1 23 HELIX 22 AC4 PRO A 489 VAL A 499 1 11 SHEET 1 AA1 6 ASN A 105 ALA A 109 0 SHEET 2 AA1 6 THR A 65 ALA A 71 1 N GLY A 69 O SER A 106 SHEET 3 AA1 6 HIS A 32 MET A 37 1 N PHE A 34 O PHE A 66 SHEET 4 AA1 6 ASN A 135 LEU A 140 1 O ASN A 135 N ILE A 33 SHEET 5 AA1 6 ASN A 165 VAL A 169 1 O ILE A 168 N PHE A 138 SHEET 6 AA1 6 ILE A 196 ARG A 198 1 O TYR A 197 N ILE A 167 SHEET 1 AA2 9 PRO A 415 THR A 423 0 SHEET 2 AA2 9 ALA A 399 LYS A 407 -1 N THR A 406 O GLU A 416 SHEET 3 AA2 9 GLU A 389 GLN A 395 -1 N VAL A 391 O TYR A 401 SHEET 4 AA2 9 LYS A 366 PHE A 373 -1 N ALA A 367 O VAL A 394 SHEET 5 AA2 9 ILE A 230 LYS A 238 -1 N THR A 236 O GLU A 368 SHEET 6 AA2 9 PRO A 353 GLY A 359 1 O ILE A 355 N VAL A 233 SHEET 7 AA2 9 PHE A 337 TYR A 343 -1 N VAL A 340 O LEU A 356 SHEET 8 AA2 9 VAL A 303 VAL A 309 -1 N VAL A 304 O ALA A 339 SHEET 9 AA2 9 ILE A 480 ILE A 483 1 O TYR A 482 N VAL A 309 SSBOND 1 CYS A 277 CYS A 294 1555 14555 2.01 CISPEP 1 LYS A 171 PRO A 172 0 22.71 CISPEP 2 GLN A 395 PRO A 396 0 -10.86 CRYST1 59.099 177.817 216.470 90.00 90.00 90.00 F 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016921 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005624 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004620 0.00000