PDB Short entry for 5V1J
HEADER    TRANSFERASE/DNA, LIGASE/DNA             02-MAR-17   5V1J              
TITLE     DNA POLYMERASE BETA OPEN PRODUCT COMPLEX WITH 8-OXOG:C AND INSERTED   
TITLE    2 DCTP                                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE BETA;                                       
COMPND   3 CHAIN: A;                                                            
COMPND   4 EC: 2.7.7.7,4.2.99.-;                                                
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: DNA (5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-
COMPND   8 3');                                                                 
COMPND   9 CHAIN: T;                                                            
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG)P*C)-3');       
COMPND  13 CHAIN: P;                                                            
COMPND  14 ENGINEERED: YES;                                                     
COMPND  15 MOL_ID: 4;                                                           
COMPND  16 MOLECULE: DNA (5'-D(P*GP*TP*CP*GP*G)-3');                            
COMPND  17 CHAIN: D;                                                            
COMPND  18 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: POLB;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 SYNTHETIC: YES;                                                      
SOURCE  10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  11 ORGANISM_TAXID: 32630;                                               
SOURCE  12 MOL_ID: 3;                                                           
SOURCE  13 SYNTHETIC: YES;                                                      
SOURCE  14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  15 ORGANISM_TAXID: 32630;                                               
SOURCE  16 MOL_ID: 4;                                                           
SOURCE  17 SYNTHETIC: YES;                                                      
SOURCE  18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  19 ORGANISM_TAXID: 32630                                                
KEYWDS    TRANSFERASE LIGASE / DNA, TRANSFERASE-DNA, LIGASE-DNA COMPLEX         
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    B.D.FREUDENTHAL,M.R.SMITH,A.M.WHITAKER,M.A.SCHAICH                    
REVDAT   4   01-JAN-20 5V1J    1       REMARK                                   
REVDAT   3   03-JAN-18 5V1J    1       REMARK                                   
REVDAT   2   13-SEP-17 5V1J    1       JRNL                                     
REVDAT   1   10-MAY-17 5V1J    0                                                
JRNL        AUTH   A.M.WHITAKER,M.R.SMITH,M.A.SCHAICH,B.D.FREUDENTHAL           
JRNL        TITL   CAPTURING A MAMMALIAN DNA POLYMERASE EXTENDING FROM AN       
JRNL        TITL 2 OXIDIZED NUCLEOTIDE.                                         
JRNL        REF    NUCLEIC ACIDS RES.            V.  45  6934 2017              
JRNL        REFN                   ESSN 1362-4962                               
JRNL        PMID   28449123                                                     
JRNL        DOI    10.1093/NAR/GKX293                                           
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.62 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (1.10.1_2155: ???)                            
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 31.76                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 93.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 25305                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.224                           
REMARK   3   R VALUE            (WORKING SET) : 0.217                           
REMARK   3   FREE R VALUE                     : 0.285                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 10.010                          
REMARK   3   FREE R VALUE TEST SET COUNT      : 2532                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 31.7636 -  6.8344    0.96     1288   147  0.1698 0.1954        
REMARK   3     2  6.8344 -  5.4335    0.98     1334   143  0.1978 0.2487        
REMARK   3     3  5.4335 -  4.7492    0.97     1317   146  0.1800 0.2323        
REMARK   3     4  4.7492 -  4.3161    0.95     1291   140  0.1920 0.2637        
REMARK   3     5  4.3161 -  4.0074    0.95     1256   149  0.1804 0.2292        
REMARK   3     6  4.0074 -  3.7716    0.96     1311   138  0.1982 0.2873        
REMARK   3     7  3.7716 -  3.5829    0.97     1339   136  0.2103 0.2544        
REMARK   3     8  3.5829 -  3.4272    0.96     1298   153  0.2060 0.2667        
REMARK   3     9  3.4272 -  3.2954    0.96     1290   145  0.2174 0.3077        
REMARK   3    10  3.2954 -  3.1818    0.95     1281   143  0.2255 0.3142        
REMARK   3    11  3.1818 -  3.0824    0.94     1251   142  0.3024 0.4670        
REMARK   3    12  3.0824 -  2.9943    0.91     1263   145  0.3744 0.4259        
REMARK   3    13  2.9943 -  2.9155    0.89     1179   123  0.3436 0.4993        
REMARK   3    14  2.9155 -  2.8445    0.91     1249   146  0.3216 0.4321        
REMARK   3    15  2.8445 -  2.7798    0.90     1193   134  0.3016 0.3784        
REMARK   3    16  2.7798 -  2.7207    0.92     1292   137  0.3080 0.3903        
REMARK   3    17  2.7207 -  2.6663    0.92     1195   151  0.3075 0.4767        
REMARK   3    18  2.6663 -  2.6160    0.85     1146   114  0.3487 0.4063        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.420            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.730           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.009           3211                                  
REMARK   3   ANGLE     :  1.134           4488                                  
REMARK   3   CHIRALITY :  0.058            504                                  
REMARK   3   PLANARITY :  0.007            474                                  
REMARK   3   DIHEDRAL  : 20.839           1796                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5V1J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-17.                  
REMARK 100 THE DEPOSITION ID IS D_1000226219.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 17-OCT-16                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU MICROMAX-007                
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.54                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 200K               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                               
REMARK 200  DATA SCALING SOFTWARE          : HKL-3000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 25305                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.616                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.6                               
REMARK 200  DATA REDUNDANCY                : 3.800                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 14.3000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 50.66                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM IMIDAZOLE, 350 MM SODIUM           
REMARK 280  ACETATE, 17% PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE    
REMARK 280  291K                                                                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       39.89750            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4900 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 19890 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P, D                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 465     LYS A     3                                                      
REMARK 465     ARG A     4                                                      
REMARK 465     LYS A     5                                                      
REMARK 465     ALA A     6                                                      
REMARK 465     PRO A     7                                                      
REMARK 465     GLN A     8                                                      
REMARK 465     GLU A     9                                                      
REMARK 465     THR A    10                                                      
REMARK 465     LEU A    11                                                      
REMARK 465     ASN A    12                                                      
REMARK 465     LYS A   244                                                      
REMARK 465     ASN A   245                                                      
REMARK 465     ASP A   246                                                      
REMARK 465     GLU A   247                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A  40    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A  54    CG   CD   CE   NZ                                   
REMARK 470     GLU A  71    CG   CD   OE1  OE2                                  
REMARK 470     LEU A  82    CG   CD1  CD2                                       
REMARK 470     ARG A  83    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LEU A  85    CG   CD1  CD2                                       
REMARK 470     GLU A  86    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  87    CG   CD   CE   NZ                                   
REMARK 470     GLN A  90    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 113    CG   CD   CE   NZ                                   
REMARK 470     LYS A 127    CG   CD   CE   NZ                                   
REMARK 470     ARG A 149    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ILE A 150    CD1                                                 
REMARK 470     ARG A 152    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 153    CG   CD   OE1  OE2                                  
REMARK 470     GLN A 157    CG   CD   OE1  NE2                                  
REMARK 470     VAL A 166    CG1  CG2                                            
REMARK 470     LYS A 167    CG   CD   CE   NZ                                   
REMARK 470     SER A 171    OG                                                  
REMARK 470     ARG A 183    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     SER A 199    OG                                                  
REMARK 470     SER A 202    OG                                                  
REMARK 470     GLU A 203    CG   CD   OE1  OE2                                  
REMARK 470     THR A 205    OG1  CG2                                            
REMARK 470     LYS A 206    CG   CD   CE   NZ                                   
REMARK 470     GLN A 207    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 209    CG   CD   CE   NZ                                   
REMARK 470     GLU A 216    CG   CD   OE1  OE2                                  
REMARK 470     GLN A 240    CG   CD   OE1  NE2                                  
REMARK 470     LEU A 259    CG   CD1  CD2                                       
REMARK 470     LYS A 262    CG   CD   CE   NZ                                   
REMARK 470     ILE A 277    CG1  CG2  CD1                                       
REMARK 470     LYS A 280    CG   CD   CE   NZ                                   
REMARK 470     GLU A 288    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 289    CG   CD   CE   NZ                                   
REMARK 470     ARG A 299    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     VAL A 303    CG1  CG2                                            
REMARK 470     LYS A 317    CG   CD   CE   NZ                                   
REMARK 470     LYS A 326    CG   CD   CE   NZ                                   
REMARK 470     GLU A 329    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 331    CG   CD   CE   NZ                                   
REMARK 470     GLU A 335    CG   CD   OE1  OE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   NH1  ARG A   182     OE2  GLU A   316              2.05            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC T   8   O4' -  C1' -  N1  ANGL. DEV. =   2.5 DEGREES          
REMARK 500     DG T  15   O4' -  C1' -  N9  ANGL. DEV. =   2.2 DEGREES          
REMARK 500     DC T  16   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PRO A  50       36.06    -93.82                                   
REMARK 500    GLN A  90     -167.36    -73.61                                   
REMARK 500    ASP A  91       78.01     64.44                                   
REMARK 500    ASP A 170      104.06   -175.69                                   
REMARK 500    CYS A 178     -163.90   -116.38                                   
REMARK 500    ALA A 185      150.29    -49.73                                   
REMARK 500    SER A 204     -158.51   -161.28                                   
REMARK 500    THR A 205      -90.20   -140.39                                   
REMARK 500    LYS A 206      -14.79     80.00                                   
REMARK 500    SER A 229      145.31    178.37                                   
REMARK 500    GLN A 240      142.86   -171.52                                   
REMARK 500    ARG A 333       48.81    -89.69                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 402  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 LYS A  60   O                                                      
REMARK 620 2 LEU A  62   O    91.6                                              
REMARK 620 3 VAL A  65   O    69.6  78.5                                        
REMARK 620 4  DC D   3   OP1 152.5  88.4  83.5                                  
REMARK 620 5 HOH D 102   O    81.0 139.1  61.2  81.0                            
REMARK 620 N                    1     2     3     4                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 401  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR A 101   O                                                      
REMARK 620 2 VAL A 103   O    88.5                                              
REMARK 620 3 ILE A 106   O    79.3  73.6                                        
REMARK 620 4  DG P   9   OP1 162.5  88.8  83.3                                  
REMARK 620 5 HOH A 517   O   101.3 103.1 176.6  96.2                            
REMARK 620 6 HOH P 101   O    79.9 144.0  70.9  92.3 112.5                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5VIF   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5VIG   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5VIH   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5VII   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5VIN   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5VIO   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5VIP   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5VIR   RELATED DB: PDB                                   
DBREF  5V1J A    1   335  UNP    P06746   DPOLB_HUMAN      1    335             
DBREF  5V1J T    1    16  PDB    5V1J     5V1J             1     16             
DBREF  5V1J P    1    11  PDB    5V1J     5V1J             1     11             
DBREF  5V1J D    1     5  PDB    5V1J     5V1J             1      5             
SEQRES   1 A  335  MET SER LYS ARG LYS ALA PRO GLN GLU THR LEU ASN GLY          
SEQRES   2 A  335  GLY ILE THR ASP MET LEU THR GLU LEU ALA ASN PHE GLU          
SEQRES   3 A  335  LYS ASN VAL SER GLN ALA ILE HIS LYS TYR ASN ALA TYR          
SEQRES   4 A  335  ARG LYS ALA ALA SER VAL ILE ALA LYS TYR PRO HIS LYS          
SEQRES   5 A  335  ILE LYS SER GLY ALA GLU ALA LYS LYS LEU PRO GLY VAL          
SEQRES   6 A  335  GLY THR LYS ILE ALA GLU LYS ILE ASP GLU PHE LEU ALA          
SEQRES   7 A  335  THR GLY LYS LEU ARG LYS LEU GLU LYS ILE ARG GLN ASP          
SEQRES   8 A  335  ASP THR SER SER SER ILE ASN PHE LEU THR ARG VAL SER          
SEQRES   9 A  335  GLY ILE GLY PRO SER ALA ALA ARG LYS PHE VAL ASP GLU          
SEQRES  10 A  335  GLY ILE LYS THR LEU GLU ASP LEU ARG LYS ASN GLU ASP          
SEQRES  11 A  335  LYS LEU ASN HIS HIS GLN ARG ILE GLY LEU LYS TYR PHE          
SEQRES  12 A  335  GLY ASP PHE GLU LYS ARG ILE PRO ARG GLU GLU MET LEU          
SEQRES  13 A  335  GLN MET GLN ASP ILE VAL LEU ASN GLU VAL LYS LYS VAL          
SEQRES  14 A  335  ASP SER GLU TYR ILE ALA THR VAL CYS GLY SER PHE ARG          
SEQRES  15 A  335  ARG GLY ALA GLU SER SER GLY ASP MET ASP VAL LEU LEU          
SEQRES  16 A  335  THR HIS PRO SER PHE THR SER GLU SER THR LYS GLN PRO          
SEQRES  17 A  335  LYS LEU LEU HIS GLN VAL VAL GLU GLN LEU GLN LYS VAL          
SEQRES  18 A  335  HIS PHE ILE THR ASP THR LEU SER LYS GLY GLU THR LYS          
SEQRES  19 A  335  PHE MET GLY VAL CYS GLN LEU PRO SER LYS ASN ASP GLU          
SEQRES  20 A  335  LYS GLU TYR PRO HIS ARG ARG ILE ASP ILE ARG LEU ILE          
SEQRES  21 A  335  PRO LYS ASP GLN TYR TYR CYS GLY VAL LEU TYR PHE THR          
SEQRES  22 A  335  GLY SER ASP ILE PHE ASN LYS ASN MET ARG ALA HIS ALA          
SEQRES  23 A  335  LEU GLU LYS GLY PHE THR ILE ASN GLU TYR THR ILE ARG          
SEQRES  24 A  335  PRO LEU GLY VAL THR GLY VAL ALA GLY GLU PRO LEU PRO          
SEQRES  25 A  335  VAL ASP SER GLU LYS ASP ILE PHE ASP TYR ILE GLN TRP          
SEQRES  26 A  335  LYS TYR ARG GLU PRO LYS ASP ARG SER GLU                      
SEQRES   1 T   16   DC  DC  DG  DA  DC  DG  DC  DC  DG  DC  DA  DT  DC          
SEQRES   2 T   16   DA  DG  DC                                                  
SEQRES   1 P   11   DG  DC  DT  DG  DA  DT  DG  DC  DG 8OG  DC                  
SEQRES   1 D    5   DG  DT  DC  DG  DG                                          
HET    8OG  P  10      23                                                       
HET     NA  A 401       1                                                       
HET     NA  A 402       1                                                       
HETNAM     8OG 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE                        
HETNAM      NA SODIUM ION                                                       
HETSYN     8OG 8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE            
FORMUL   3  8OG    C10 H14 N5 O8 P                                              
FORMUL   5   NA    2(NA 1+)                                                     
FORMUL   7  HOH   *32(H2 O)                                                     
HELIX    1 AA1 GLY A   13  VAL A   29  1                                  17    
HELIX    2 AA2 ALA A   32  TYR A   49  1                                  18    
HELIX    3 AA3 SER A   55  LYS A   61  1                                   7    
HELIX    4 AA4 GLY A   66  GLY A   80  1                                  15    
HELIX    5 AA5 LEU A   82  GLN A   90  1                                   9    
HELIX    6 AA6 ASP A   91  ARG A  102  1                                  12    
HELIX    7 AA7 GLY A  107  GLU A  117  1                                  11    
HELIX    8 AA8 THR A  121  ASN A  128  1                                   8    
HELIX    9 AA9 GLU A  129  LEU A  132  5                                   4    
HELIX   10 AB1 ASN A  133  TYR A  142  1                                  10    
HELIX   11 AB2 TYR A  142  GLU A  147  1                                   6    
HELIX   12 AB3 ARG A  152  ASP A  170  1                                  19    
HELIX   13 AB4 LEU A  211  VAL A  221  1                                  11    
HELIX   14 AB5 PRO A  261  GLY A  274  1                                  14    
HELIX   15 AB6 SER A  275  LYS A  289  1                                  15    
HELIX   16 AB7 SER A  315  ILE A  323  1                                   9    
HELIX   17 AB8 GLU A  329  ARG A  333  5                                   5    
SHEET    1 AA1 2 ILE A 150  PRO A 151  0                                        
SHEET    2 AA1 2 SER A 187  SER A 188 -1  O  SER A 188   N  ILE A 150           
SHEET    1 AA2 5 ILE A 174  CYS A 178  0                                        
SHEET    2 AA2 5 MET A 191  THR A 196 -1  O  ASP A 192   N  CYS A 178           
SHEET    3 AA2 5 ARG A 253  LEU A 259  1  O  ASP A 256   N  MET A 191           
SHEET    4 AA2 5 LYS A 234  CYS A 239 -1  N  GLY A 237   O  ILE A 255           
SHEET    5 AA2 5 ILE A 224  LYS A 230 -1  N  LEU A 228   O  MET A 236           
SHEET    1 AA3 2 PHE A 291  ILE A 293  0                                        
SHEET    2 AA3 2 ILE A 298  PRO A 300 -1  O  ARG A 299   N  THR A 292           
LINK         O   LYS A  60                NA    NA A 402     1555   1555  2.72  
LINK         O   LEU A  62                NA    NA A 402     1555   1555  2.45  
LINK         O   VAL A  65                NA    NA A 402     1555   1555  3.10  
LINK         O   THR A 101                NA    NA A 401     1555   1555  2.29  
LINK         O   VAL A 103                NA    NA A 401     1555   1555  2.91  
LINK         O   ILE A 106                NA    NA A 401     1555   1555  2.74  
LINK         OP1  DG P   9                NA    NA A 401     1555   1555  2.38  
LINK         O3'  DG P   9                 P   8OG P  10     1555   1555  1.60  
LINK         O3' 8OG P  10                 P    DC P  11     1555   1555  1.61  
LINK         OP1  DC D   3                NA    NA A 402     1555   1555  3.07  
LINK        NA    NA A 401                 O   HOH A 517     1555   1555  2.61  
LINK        NA    NA A 401                 O   HOH P 101     1555   1555  2.96  
LINK        NA    NA A 402                 O   HOH D 102     1555   1555  2.28  
CISPEP   1 GLY A  274    SER A  275          0         3.34                     
SITE     1 AC1  6 THR A 101  VAL A 103  ILE A 106  HOH A 517                    
SITE     2 AC1  6  DG P   9  HOH P 101                                          
SITE     1 AC2  5 LYS A  60  LEU A  62  VAL A  65   DC D   3                    
SITE     2 AC2  5 HOH D 102                                                     
CRYST1   55.273   79.795   55.887  90.00 110.29  90.00 P 1 21 1      2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.018092  0.000000  0.006690        0.00000                         
SCALE2      0.000000  0.012532  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.019077        0.00000