PDB Short entry for 5WN0
HEADER    HYDROLASE, LYASE/DNA                    31-JUL-17   5WN0              
TITLE     APE1 EXONUCLEASE SUBSTRATE COMPLEX WITH A C/G MATCH                   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE;                 
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: APEX1, APEX NUCLEASE,APEN,APURINIC-APYRIMIDINIC ENDONUCLEASE
COMPND   5 1, APE-1, REF-1, REDOX FACTOR-1;                                     
COMPND   6 EC: 3.1.-.-, 4.2.99.18;                                              
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: DNA (5'-D(P*TP*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3');          
COMPND  10 CHAIN: C;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3');              
COMPND  14 CHAIN: D;                                                            
COMPND  15 ENGINEERED: YES;                                                     
COMPND  16 MOL_ID: 4;                                                           
COMPND  17 MOLECULE: DNA (5'-                                                   
COMPND  18 D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-   
COMPND  19 3');                                                                 
COMPND  20 CHAIN: E;                                                            
COMPND  21 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: APEX1, APE, APE1, APEX, APX, HAP1, REF1;                       
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 SYNTHETIC: YES;                                                      
SOURCE  10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  11 ORGANISM_TAXID: 32630;                                               
SOURCE  12 MOL_ID: 3;                                                           
SOURCE  13 SYNTHETIC: YES;                                                      
SOURCE  14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  15 ORGANISM_TAXID: 32630;                                               
SOURCE  16 MOL_ID: 4;                                                           
SOURCE  17 SYNTHETIC: YES;                                                      
SOURCE  18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  19 ORGANISM_TAXID: 32630                                                
KEYWDS    HYDROLASE, LYASE-DNA COMPLEX                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    B.D.FREUDENTHAL,A.M.WHITAKER                                          
REVDAT   1   28-FEB-18 5WN0    0                                                
JRNL        AUTH   A.M.WHITAKER,T.S.FLYNN,B.D.FREUDENTHAL                       
JRNL        TITL   MOLECULAR SNAPSHOTS OF APE1 PROOFREADING MISMATCHES AND      
JRNL        TITL 2 REMOVING DNA DAMAGE.                                         
JRNL        REF    NAT COMMUN                    V.   9   399 2018              
JRNL        REFN                   ESSN 2041-1723                               
JRNL        PMID   29374164                                                     
JRNL        DOI    10.1038/S41467-017-02175-Y                                   
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.60 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.10_2155                                     
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 24.91                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.960                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 92.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 23443                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.223                           
REMARK   3   R VALUE            (WORKING SET) : 0.217                           
REMARK   3   FREE R VALUE                     : 0.287                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 8.480                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 3730                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 24.9130 -  7.6564    0.92     1497   140  0.1445 0.1897        
REMARK   3     2  7.6564 -  6.1066    0.95     1537   142  0.1729 0.2324        
REMARK   3     3  6.1066 -  5.3433    0.97     1576   142  0.1402 0.1966        
REMARK   3     4  5.3433 -  4.8587    0.97     1535   142  0.1460 0.1841        
REMARK   3     5  4.8587 -  4.5127    0.97     1578   149  0.1455 0.2145        
REMARK   3     6  4.5127 -  4.2480    0.97     1589   146  0.1408 0.2297        
REMARK   3     7  4.2480 -  4.0362    0.95     1534   141  0.1755 0.2116        
REMARK   3     8  4.0362 -  3.8612    0.92     1500   130  0.2312 0.3240        
REMARK   3     9  3.8612 -  3.7130    0.95     1534   143  0.2379 0.3604        
REMARK   3    10  3.7130 -  3.5853    0.90     1496   132  0.3046 0.3873        
REMARK   3    11  3.5853 -  3.4735    0.83     1304   125  0.3042 0.3000        
REMARK   3    12  3.4735 -  3.3744    0.91     1485   135  0.2533 0.3166        
REMARK   3    13  3.3744 -  3.2858    0.96     1571   146  0.2255 0.3262        
REMARK   3    14  3.2858 -  3.2058    0.96     1501   146  0.2467 0.3089        
REMARK   3    15  3.2058 -  3.1331    0.96     1587   146  0.2464 0.3288        
REMARK   3    16  3.1331 -  3.0665    0.96     1544   146  0.2594 0.2986        
REMARK   3    17  3.0665 -  3.0053    0.97     1596   150  0.2690 0.3892        
REMARK   3    18  3.0053 -  2.9486    0.96     1458   135  0.2980 0.4180        
REMARK   3    19  2.9486 -  2.8961    0.96     1623   152  0.2735 0.3435        
REMARK   3    20  2.8961 -  2.8470    0.95     1498   142  0.2727 0.3621        
REMARK   3    21  2.8470 -  2.8012    0.95     1557   139  0.2682 0.2975        
REMARK   3    22  2.8012 -  2.7581    0.94     1539   142  0.2603 0.3908        
REMARK   3    23  2.7581 -  2.7176    0.93     1475   137  0.2654 0.3572        
REMARK   3    24  2.7176 -  2.6794    0.89     1500   136  0.3036 0.4234        
REMARK   3    25  2.6794 -  2.6432    0.85     1349   131  0.3028 0.3070        
REMARK   3    26  2.6432 -  2.6089    0.84     1331   124  0.2909 0.3979        
REMARK   3    27  2.6089 -  2.5764    0.57      945    91  0.3002 0.3483        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.420            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.650           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 41.39                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 46.35                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.010           5414                                  
REMARK   3   ANGLE     :  1.218           7524                                  
REMARK   3   CHIRALITY :  0.058            812                                  
REMARK   3   PLANARITY :  0.008            825                                  
REMARK   3   DIHEDRAL  : 20.213           3074                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5WN0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-AUG-17.                  
REMARK 100 THE DEPOSITION ID IS D_1000229179.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 24-MAR-17                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU MICROMAX-007                
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.54                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 200K               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 23502                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.600                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 25.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.6                               
REMARK 200  DATA REDUNDANCY                : 4.000                              
REMARK 200  R MERGE                    (I) : 0.12600                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 9.4000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.64                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.5                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.00                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.56100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHENIX                                                
REMARK 200 STARTING MODEL: PDB ENTRY 5DFF                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 52.70                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 7% PEG20000, 100 MM SODIUM CITRATE,      
REMARK 280  15% GLYCEROL, 5 MM CALCIUM CHLORIDE, PH 5.0, VAPOR DIFFUSION,       
REMARK 280  SITTING DROP, TEMPERATURE 291K                                      
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1                              
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4380 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 17640 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2                             
REMARK 350 SURFACE AREA OF THE COMPLEX: 12290 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ALA B    43                                                      
REMARK 465     PRO B   261                                                      
REMARK 465     TYR B   262                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A  86    CG   CD   OE1  OE2                                  
REMARK 470     ASP A 124    CG   OD1  OD2                                       
REMARK 470     LYS A 125    CG   CD   CE   NZ                                   
REMARK 470     ASP A 148    CG   OD1  OD2                                       
REMARK 470     GLU A 149    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 150    CG   CD   OE1  OE2                                  
REMARK 470     GLN A 153    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 194    CG   CD   CE   NZ                                   
REMARK 470     LYS A 224    CG   CD   CE   NZ                                   
REMARK 470     GLN B  51    CD   OE1  NE2                                       
REMARK 470     ASP B 124    CG   OD1  OD2                                       
REMARK 470     LYS B 125    CG   CD   CE   NZ                                   
REMARK 470     GLU B 126    CG   CD   OE1  OE2                                  
REMARK 470     GLU B 149    CG   CD   OE1  OE2                                  
REMARK 470     GLU B 150    CG   CD   OE1  OE2                                  
REMARK 470     ASP B 152    CG   OD1  OD2                                       
REMARK 470     GLN B 153    CG   CD   OE1  NE2                                  
REMARK 470     GLU B 154    CG   CD   OE1  OE2                                  
REMARK 470     ARG B 181    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG B 187    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS B 224    CG   CD   CE   NZ                                   
REMARK 470     LYS B 228    CG   CD   CE   NZ                                   
REMARK 470     VAL B 247    CG1  CG2                                            
REMARK 470     MET B 271    CG   SD   CE                                        
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   OH   TYR B    45     OD2  ASP B    47              1.67            
REMARK 500   N    ILE A   146     OD1  ASP A   152              2.11            
REMARK 500   OG1  THR B   233     OE1  GLU B   236              2.12            
REMARK 500   OP2   DT D     6     O    HOH D   101              2.14            
REMARK 500   OD1  ASN B   272     O    HOH B   401              2.14            
REMARK 500   OD2  ASP B   251     NH2  ARG B   281              2.16            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    PRO B 248   C   -  N   -  CD  ANGL. DEV. =  15.5 DEGREES          
REMARK 500     DT C   1   O4' -  C1' -  N1  ANGL. DEV. =   1.9 DEGREES          
REMARK 500     DG C   3   O4' -  C1' -  N9  ANGL. DEV. =   2.2 DEGREES          
REMARK 500     DA E   3   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  70       62.81     39.91                                   
REMARK 500    GLU A 110       27.34    -77.83                                   
REMARK 500    LEU A 114       57.18   -145.16                                   
REMARK 500    SER A 129     -145.16     58.44                                   
REMARK 500    ASP A 152       40.87   -102.70                                   
REMARK 500    LEU A 199      -38.00   -145.79                                   
REMARK 500    ASN A 259       27.89   -140.64                                   
REMARK 500    SER A 290        0.85    -64.44                                   
REMARK 500    SER A 290        0.85    -65.25                                   
REMARK 500    PRO B  49      170.98    -52.15                                   
REMARK 500    CYS B  99      121.94   -171.71                                   
REMARK 500    GLU B 107       -5.25    -55.58                                   
REMARK 500    LEU B 111       78.71   -119.40                                   
REMARK 500    SER B 123      -83.71    -98.96                                   
REMARK 500    LYS B 125       95.81    -67.42                                   
REMARK 500    SER B 129     -145.75     48.66                                   
REMARK 500    ASP B 148       49.78    -85.70                                   
REMARK 500    ASP B 152      143.14   -179.01                                   
REMARK 500    ARG B 181       34.37    -95.55                                   
REMARK 500    LYS B 224      -70.97    -51.47                                   
REMARK 500    PHE B 232       20.65   -141.69                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  5WN0 A   43   318  UNP    P27695   APEX1_HUMAN     43    318             
DBREF  5WN0 B   43   318  UNP    P27695   APEX1_HUMAN     43    318             
DBREF  5WN0 C    1    11  PDB    5WN0     5WN0             1     11             
DBREF  5WN0 D    1    10  PDB    5WN0     5WN0             1     10             
DBREF  5WN0 E    1    21  PDB    5WN0     5WN0             1     21             
SEQADV 5WN0 ALA A  138  UNP  P27695    CYS   138 ENGINEERED MUTATION            
SEQADV 5WN0 ALA B  138  UNP  P27695    CYS   138 ENGINEERED MUTATION            
SEQRES   1 A  276  ALA LEU TYR GLU ASP PRO PRO ASP GLN LYS THR SER PRO          
SEQRES   2 A  276  SER GLY LYS PRO ALA THR LEU LYS ILE CYS SER TRP ASN          
SEQRES   3 A  276  VAL ASP GLY LEU ARG ALA TRP ILE LYS LYS LYS GLY LEU          
SEQRES   4 A  276  ASP TRP VAL LYS GLU GLU ALA PRO ASP ILE LEU CYS LEU          
SEQRES   5 A  276  GLN GLU THR LYS CYS SER GLU ASN LYS LEU PRO ALA GLU          
SEQRES   6 A  276  LEU GLN GLU LEU PRO GLY LEU SER HIS GLN TYR TRP SER          
SEQRES   7 A  276  ALA PRO SER ASP LYS GLU GLY TYR SER GLY VAL GLY LEU          
SEQRES   8 A  276  LEU SER ARG GLN ALA PRO LEU LYS VAL SER TYR GLY ILE          
SEQRES   9 A  276  GLY ASP GLU GLU HIS ASP GLN GLU GLY ARG VAL ILE VAL          
SEQRES  10 A  276  ALA GLU PHE ASP SER PHE VAL LEU VAL THR ALA TYR VAL          
SEQRES  11 A  276  PRO ASN ALA GLY ARG GLY LEU VAL ARG LEU GLU TYR ARG          
SEQRES  12 A  276  GLN ARG TRP ASP GLU ALA PHE ARG LYS PHE LEU LYS GLY          
SEQRES  13 A  276  LEU ALA SER ARG LYS PRO LEU VAL LEU CYS GLY ASP LEU          
SEQRES  14 A  276  ASN VAL ALA HIS GLU GLU ILE ASP LEU ARG ASN PRO LYS          
SEQRES  15 A  276  GLY ASN LYS LYS ASN ALA GLY PHE THR PRO GLN GLU ARG          
SEQRES  16 A  276  GLN GLY PHE GLY GLU LEU LEU GLN ALA VAL PRO LEU ALA          
SEQRES  17 A  276  ASP SER PHE ARG HIS LEU TYR PRO ASN THR PRO TYR ALA          
SEQRES  18 A  276  TYR THR PHE TRP THR TYR MET MET ASN ALA ARG SER LYS          
SEQRES  19 A  276  ASN VAL GLY TRP ARG LEU ASP TYR PHE LEU LEU SER HIS          
SEQRES  20 A  276  SER LEU LEU PRO ALA LEU CYS ASP SER LYS ILE ARG SER          
SEQRES  21 A  276  LYS ALA LEU GLY SER ASP HIS CYS PRO ILE THR LEU TYR          
SEQRES  22 A  276  LEU ALA LEU                                                  
SEQRES   1 B  276  ALA LEU TYR GLU ASP PRO PRO ASP GLN LYS THR SER PRO          
SEQRES   2 B  276  SER GLY LYS PRO ALA THR LEU LYS ILE CYS SER TRP ASN          
SEQRES   3 B  276  VAL ASP GLY LEU ARG ALA TRP ILE LYS LYS LYS GLY LEU          
SEQRES   4 B  276  ASP TRP VAL LYS GLU GLU ALA PRO ASP ILE LEU CYS LEU          
SEQRES   5 B  276  GLN GLU THR LYS CYS SER GLU ASN LYS LEU PRO ALA GLU          
SEQRES   6 B  276  LEU GLN GLU LEU PRO GLY LEU SER HIS GLN TYR TRP SER          
SEQRES   7 B  276  ALA PRO SER ASP LYS GLU GLY TYR SER GLY VAL GLY LEU          
SEQRES   8 B  276  LEU SER ARG GLN ALA PRO LEU LYS VAL SER TYR GLY ILE          
SEQRES   9 B  276  GLY ASP GLU GLU HIS ASP GLN GLU GLY ARG VAL ILE VAL          
SEQRES  10 B  276  ALA GLU PHE ASP SER PHE VAL LEU VAL THR ALA TYR VAL          
SEQRES  11 B  276  PRO ASN ALA GLY ARG GLY LEU VAL ARG LEU GLU TYR ARG          
SEQRES  12 B  276  GLN ARG TRP ASP GLU ALA PHE ARG LYS PHE LEU LYS GLY          
SEQRES  13 B  276  LEU ALA SER ARG LYS PRO LEU VAL LEU CYS GLY ASP LEU          
SEQRES  14 B  276  ASN VAL ALA HIS GLU GLU ILE ASP LEU ARG ASN PRO LYS          
SEQRES  15 B  276  GLY ASN LYS LYS ASN ALA GLY PHE THR PRO GLN GLU ARG          
SEQRES  16 B  276  GLN GLY PHE GLY GLU LEU LEU GLN ALA VAL PRO LEU ALA          
SEQRES  17 B  276  ASP SER PHE ARG HIS LEU TYR PRO ASN THR PRO TYR ALA          
SEQRES  18 B  276  TYR THR PHE TRP THR TYR MET MET ASN ALA ARG SER LYS          
SEQRES  19 B  276  ASN VAL GLY TRP ARG LEU ASP TYR PHE LEU LEU SER HIS          
SEQRES  20 B  276  SER LEU LEU PRO ALA LEU CYS ASP SER LYS ILE ARG SER          
SEQRES  21 B  276  LYS ALA LEU GLY SER ASP HIS CYS PRO ILE THR LEU TYR          
SEQRES  22 B  276  LEU ALA LEU                                                  
SEQRES   1 C   11   DT  DC  DG  DA  DC  DG  DG  DA  DT  DC  DC                  
SEQRES   1 D   10   DG  DC  DT  DG  DA  DT  DG  DC  DG  DC                      
SEQRES   1 E   21   DG  DG  DA  DT  DC  DC  DG  DT  DC  DG  DA  DG  DC          
SEQRES   2 E   21   DG  DC  DA  DT  DC  DA  DG  DC                              
FORMUL   6  HOH   *72(H2 O)                                                     
HELIX    1 AA1 GLY A   71  LYS A   78  1                                   8    
HELIX    2 AA2 LYS A   79  ALA A   88  1                                  10    
HELIX    3 AA3 SER A  100  LEU A  104  5                                   5    
HELIX    4 AA4 PRO A  105  GLN A  109  5                                   5    
HELIX    5 AA5 GLY A  176  VAL A  180  5                                   5    
HELIX    6 AA6 ARG A  181  GLY A  198  1                                  18    
HELIX    7 AA7 GLU A  216  LEU A  220  5                                   5    
HELIX    8 AA8 THR A  233  VAL A  247  1                                  15    
HELIX    9 AA9 SER A  252  TYR A  257  1                                   6    
HELIX   10 AB1 TYR A  269  ALA A  273  5                                   5    
HELIX   11 AB2 HIS A  289  LEU A  292  5                                   4    
HELIX   12 AB3 GLY B   71  LYS B   78  1                                   8    
HELIX   13 AB4 LYS B   79  ALA B   88  1                                  10    
HELIX   14 AB5 PRO B  105  GLN B  109  5                                   5    
HELIX   15 AB6 LEU B  111  SER B  115  5                                   5    
HELIX   16 AB7 GLY B  176  VAL B  180  5                                   5    
HELIX   17 AB8 ARG B  181  LEU B  196  1                                  16    
HELIX   18 AB9 LEU B  196  SER B  201  1                                   6    
HELIX   19 AC1 GLU B  216  LEU B  220  5                                   5    
HELIX   20 AC2 PRO B  223  LYS B  227  5                                   5    
HELIX   21 AC3 THR B  233  VAL B  247  1                                  15    
HELIX   22 AC4 SER B  252  TYR B  257  1                                   6    
HELIX   23 AC5 TYR B  269  ALA B  273  5                                   5    
HELIX   24 AC6 HIS B  289  PRO B  293  5                                   5    
SHEET    1 AA1 6 HIS A 116  SER A 120  0                                        
SHEET    2 AA1 6 VAL A 131  SER A 135 -1  O  SER A 135   N  HIS A 116           
SHEET    3 AA1 6 ILE A  91  GLN A  95 -1  N  LEU A  92   O  LEU A 134           
SHEET    4 AA1 6 LEU A  62  ASN A  68  1  N  CYS A  65   O  ILE A  91           
SHEET    5 AA1 6 ILE A 312  LEU A 316 -1  O  LEU A 314   N  ILE A  64           
SHEET    6 AA1 6 LEU A 295  ILE A 300 -1  N  LYS A 299   O  THR A 313           
SHEET    1 AA2 6 LYS A 141  TYR A 144  0                                        
SHEET    2 AA2 6 VAL A 157  GLU A 161 -1  O  GLU A 161   N  LYS A 141           
SHEET    3 AA2 6 VAL A 166  TYR A 171 -1  O  LEU A 167   N  ALA A 160           
SHEET    4 AA2 6 LEU A 205  ASP A 210  1  O  VAL A 206   N  VAL A 168           
SHEET    5 AA2 6 ASP A 283  LEU A 287 -1  O  LEU A 286   N  LEU A 207           
SHEET    6 AA2 6 ALA A 250  ASP A 251 -1  N  ALA A 250   O  LEU A 287           
SHEET    1 AA3 6 HIS B 116  SER B 120  0                                        
SHEET    2 AA3 6 VAL B 131  SER B 135 -1  O  LEU B 133   N  TYR B 118           
SHEET    3 AA3 6 ILE B  91  GLN B  95 -1  N  LEU B  92   O  LEU B 134           
SHEET    4 AA3 6 LEU B  62  ASN B  68  1  N  TRP B  67   O  CYS B  93           
SHEET    5 AA3 6 ILE B 312  LEU B 316 -1  O  LEU B 314   N  ILE B  64           
SHEET    6 AA3 6 LEU B 295  ILE B 300 -1  N  LYS B 299   O  THR B 313           
SHEET    1 AA4 6 LYS B 141  TYR B 144  0                                        
SHEET    2 AA4 6 VAL B 157  GLU B 161 -1  O  VAL B 159   N  SER B 143           
SHEET    3 AA4 6 VAL B 166  TYR B 171 -1  O  LEU B 167   N  ALA B 160           
SHEET    4 AA4 6 LEU B 205  ASP B 210  1  O  VAL B 206   N  VAL B 168           
SHEET    5 AA4 6 ASP B 283  LEU B 287 -1  O  LEU B 286   N  LEU B 207           
SHEET    6 AA4 6 ALA B 250  ASP B 251 -1  N  ALA B 250   O  LEU B 287           
CISPEP   1 VAL A  247    PRO A  248          0       -10.96                     
CISPEP   2 VAL B  247    PRO B  248          0        -0.48                     
CRYST1   44.264   61.942   73.765  82.59  76.88  85.89 P 1           2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022592 -0.001623 -0.005112        0.00000                         
SCALE2      0.000000  0.016186 -0.001891        0.00000                         
SCALE3      0.000000  0.000000  0.014015        0.00000