PDB Short entry for 5X1X
HEADER    HYDROLASE                               27-JAN-17   5X1X              
TITLE     SOLUTION NMR STRUCTURE OF DNA MISMATCH REPAIR PROTEIN MUTT (FAMILY    
TITLE    2 NUDIX HYDROLASE) FROM METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS 252
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: MUTATOR MUTT PROTEIN;                                      
COMPND   3 CHAIN: A;                                                            
COMPND   4 EC: 3.6.1.55;                                                        
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MN8;        
SOURCE   3 ORGANISM_TAXID: 548470;                                              
SOURCE   4 VARIANT: MRSA252;                                                    
SOURCE   5 ATCC: NCTC13277;                                                     
SOURCE   6 CELL: BACTERIAL;                                                     
SOURCE   7 GENE: HMPREF0769_10658;                                              
SOURCE   8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   9 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE  10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE  11 EXPRESSION_SYSTEM_CELL: BACTERIAL;                                   
SOURCE  12 EXPRESSION_SYSTEM_VECTOR_TYPE: BACTERIAL PLASMID;                    
SOURCE  13 EXPRESSION_SYSTEM_PLASMID: PSPEEDET                                  
KEYWDS    DIVALENT ION (MG2+, CA2+) BINDING PROTEIN, ADENOSINE MONOPHOSPHATE    
KEYWDS   2 (AMP) BINDING PROTEIN, HYDROLASE                                     
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    A.WAHAB,S.DURRESHAHWAR,H.SCHWALBE,C.RICHTER,M.I.CHOUDHARY             
REVDAT   1   22-FEB-17 5X1X    0                                                
JRNL        AUTH   A.WAHAB                                                      
JRNL        TITL   SOLUTION NMR STRUCTURE OF DNA MISMATCH REPAIR PROTEIN MUTT   
JRNL        TITL 2 (FAMILY NUDIX HYDROLASE) FROM METHICILLIN RESISTANT          
JRNL        TITL 3 STAPHYLOCOCCUS AUREUS 252                                    
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CYANA 3.97                                           
REMARK   3   AUTHORS     : GUNTERT, MUMENTHALER AND WUTHRICH                    
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5X1X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JAN-17.                  
REMARK 100 THE DEPOSITION ID IS D_1300002770.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 6.9                                
REMARK 210  IONIC STRENGTH                 : 25 MM SODIUM PHOSPHATE, 100 MM     
REMARK 210                                   NACL                               
REMARK 210  PRESSURE                       : 1 ATM                              
REMARK 210  SAMPLE CONTENTS                : 1 MM [U-99% 13C; U-99% 15N] DNA    
REMARK 210                                   MISMATCH REPAIR PROTEIN MUTT       
REMARK 210                                   FROM NUDIX HYDROLASE FAMILY, 95%   
REMARK 210                                   H2O/5% D2O                         
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 3D HNCO; 3D        
REMARK 210                                   HNCA; 3D HNCACB; 3D HNHA; 3D       
REMARK 210                                   CC(CO)NH; 3D (H)CC(CO)NH; 3D 1H-   
REMARK 210                                   15N NOESY; 3D 1H-13C NOESY         
REMARK 210                                   ALIPHATIC; 3D 1H-13C NOESY         
REMARK 210                                   AROMATIC                           
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : ASCEND; AVANCEIII                  
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TOPSPIN 3.6 PL5, TOPSPIN 3.5       
REMARK 210                                   PL5, CARA, SPARKY SPARKY 3,        
REMARK 210                                   CYANA 3.97                         
REMARK 210   METHOD USED                   : DISTANCE GEOMETRY                  
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : ALL CALCULATED STRUCTURES          
REMARK 210                                   SUBMITTED                          
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A  14      120.75   -171.89                                   
REMARK 500  1 ARG A  23     -169.57    -74.84                                   
REMARK 500  1 SER A  24     -168.66    -67.13                                   
REMARK 500  1 MET A  27     -175.42    -58.67                                   
REMARK 500  1 LEU A  29       53.34     33.78                                   
REMARK 500  1 GLU A  34      146.13   -179.85                                   
REMARK 500  1 SER A 101     -176.14    176.94                                   
REMARK 500  1 LEU A 113       40.83    -92.00                                   
REMARK 500  1 ASN A 114      105.75    -23.68                                   
REMARK 500  2 LYS A   2     -169.63    -79.65                                   
REMARK 500  2 ARG A  23      -75.84    -62.01                                   
REMARK 500  2 SER A  24     -167.71   -161.40                                   
REMARK 500  2 MET A  27     -178.09    -64.57                                   
REMARK 500  2 LEU A  96       19.92     57.84                                   
REMARK 500  2 LYS A 100      -60.20   -104.50                                   
REMARK 500  2 SER A 101     -172.29    176.90                                   
REMARK 500  2 SER A 106     -177.59    -67.58                                   
REMARK 500  2 LEU A 113       40.93    -91.88                                   
REMARK 500  2 ASN A 114      104.43    -23.58                                   
REMARK 500  3 SER A  24       33.84     71.90                                   
REMARK 500  3 MET A  27      -79.24    -95.23                                   
REMARK 500  3 LEU A  29       73.98   -112.71                                   
REMARK 500  3 GLU A  34     -178.19   -176.51                                   
REMARK 500  3 GLU A  56      -63.88    -94.25                                   
REMARK 500  3 VAL A  68      -63.08    -99.04                                   
REMARK 500  3 LYS A  86      105.70    -56.69                                   
REMARK 500  3 LEU A  96       18.22     59.91                                   
REMARK 500  3 LYS A 100      -61.46   -106.17                                   
REMARK 500  3 SER A 101     -177.45    177.71                                   
REMARK 500  3 LEU A 113       44.40    -88.48                                   
REMARK 500  3 ASN A 114      108.99    -24.39                                   
REMARK 500  3 ALA A 116      165.34    -49.69                                   
REMARK 500  4 LYS A   3       97.76    -66.86                                   
REMARK 500  4 SER A  24     -169.82   -160.28                                   
REMARK 500  4 MET A  27     -175.26    -59.15                                   
REMARK 500  4 LEU A  29       52.33     33.80                                   
REMARK 500  4 GLU A  34      148.03   -176.48                                   
REMARK 500  4 ASN A  43       40.17   -108.20                                   
REMARK 500  4 GLU A  56      -60.98    -90.53                                   
REMARK 500  4 LYS A 100      -60.65   -103.71                                   
REMARK 500  4 SER A 101     -177.97    175.70                                   
REMARK 500  4 LEU A 113       43.74    -88.55                                   
REMARK 500  4 ASN A 114      110.60    -24.41                                   
REMARK 500  5 SER A  24     -166.05   -173.22                                   
REMARK 500  5 LEU A  29       51.87     37.95                                   
REMARK 500  5 LEU A  62      109.30    -42.66                                   
REMARK 500  5 TYR A  75     -168.78   -114.36                                   
REMARK 500  5 SER A 101     -172.12    178.26                                   
REMARK 500  5 LEU A 113       40.15    -93.21                                   
REMARK 500  5 ASN A 114      103.34    -23.34                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     208 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 36048   RELATED DB: BMRB                                 
REMARK 900 SOLUTION NMR STRUCTURE OF DNA MISMATCH REPAIR PROTEIN MUTT (FAMILY   
REMARK 900 NUDIX HYDROLASE) FROM METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS    
REMARK 900 252                                                                  
DBREF1 5X1X A    1   130  UNP                  A0A0E1XLJ5_STAAU                 
DBREF2 5X1X A     A0A0E1XLJ5                          1         130             
SEQRES   1 A  130  MET LYS LYS VAL ILE ASN VAL VAL GLY ALA ILE ILE PHE          
SEQRES   2 A  130  SER ASP ASN LYS ILE LEU CYS ALA GLN ARG SER GLU LYS          
SEQRES   3 A  130  MET SER LEU PRO LEU MET TRP GLU PHE PRO GLY GLY LYS          
SEQRES   4 A  130  VAL GLU LYS ASN GLU THR GLU LYS ASP ALA LEU ILE ARG          
SEQRES   5 A  130  GLU ILE ARG GLU GLU MET LYS CYS ASP LEU ILE VAL GLY          
SEQRES   6 A  130  ASP LYS VAL ILE THR THR GLU HIS GLU TYR ASP PHE GLY          
SEQRES   7 A  130  ILE VAL ARG LEU THR THR TYR LYS CYS THR LEU ASN LYS          
SEQRES   8 A  130  GLU LEU PRO THR LEU THR GLU HIS LYS SER ILE GLU TRP          
SEQRES   9 A  130  LEU SER ILE ASN GLU LEU ASP LYS LEU ASN TRP ALA PRO          
SEQRES  10 A  130  ALA ASP ILE PRO ALA VAL ASN LYS ILE MET THR GLU GLY          
HELIX    1 AA1 LYS A   47  GLU A   57  1                                  11    
HELIX    2 AA2 GLU A  109  ASN A  114  5                                   6    
HELIX    3 AA3 ASP A  119  THR A  128  1                                  10    
SHEET    1 AA1 4 VAL A   4  VAL A   8  0                                        
SHEET    2 AA1 4 GLY A  78  THR A  88  1  O  ILE A  79   N  ILE A   5           
SHEET    3 AA1 4 ILE A  11  SER A  14  1  N  ILE A  11   O  CYS A  87           
SHEET    4 AA1 4 LYS A  17  ILE A  18 -1  O  LYS A  17   N  SER A  14           
SHEET    1 AA2 3 VAL A   4  VAL A   8  0                                        
SHEET    2 AA2 3 GLY A  78  THR A  88  1  O  ILE A  79   N  ILE A   5           
SHEET    3 AA2 3 VAL A  64  TYR A  75 -1  N  GLY A  65   O  LYS A  86           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000