PDB Short entry for 5X6U HEADER PROTEIN BINDING 23-FEB-17 5X6U TITLE CRYSTAL STRUCTURE OF HUMAN HETEROPENTAMERIC COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND MTOR ACTIVATOR COMPND 5 3,MEK-BINDING PARTNER 1,MP1,MITOGEN-ACTIVATED PROTEIN KINASE KINASE COMPND 6 1-INTERACTING PROTEIN 1,MITOGEN-ACTIVATED PROTEIN KINASE SCAFFOLD COMPND 7 PROTEIN 1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR2; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: ENDOSOMAL ADAPTOR PROTEIN P14,LATE ENDOSOMAL/LYSOSOMAL MP1- COMPND 13 INTERACTING PROTEIN,LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND COMPND 14 MTOR ACTIVATOR 2,MITOGEN-ACTIVATED PROTEIN-BINDING PROTEIN- COMPND 15 INTERACTING PROTEIN,MAPBP-INTERACTING PROTEIN,ROADBLOCK DOMAIN- COMPND 16 CONTAINING PROTEIN 3; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 3; COMPND 19 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR5; COMPND 20 CHAIN: C; COMPND 21 SYNONYM: HEPATITIS B VIRUS X-INTERACTING PROTEIN,HBX-INTERACTING COMPND 22 PROTEIN,LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND MTOR ACTIVATOR COMPND 23 5; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 4; COMPND 26 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR4; COMPND 27 CHAIN: D; COMPND 28 SYNONYM: LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND MTOR ACTIVATOR COMPND 29 4; COMPND 30 ENGINEERED: YES; COMPND 31 MOL_ID: 5; COMPND 32 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR1; COMPND 33 CHAIN: E; COMPND 34 FRAGMENT: UNP RESIDUES 42-161; COMPND 35 SYNONYM: LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND MTOR ACTIVATOR COMPND 36 1,LIPID RAFT ADAPTOR PROTEIN P18,PROTEIN ASSOCIATED WITH DRMS AND COMPND 37 ENDOSOMES,P27KIP1-RELEASING FACTOR FROM RHOA,P27RF-RHO; COMPND 38 ENGINEERED: YES; COMPND 39 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LAMTOR3, MAP2K1IP1, MAPKSP1, PRO2783; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: LAMTOR2, MAPBPIP, ROBLD3, HSPC003; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: LAMTOR5, HBXIP, XIP; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: LAMTOR4, C7ORF59; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 GENE: LAMTOR1, C11ORF59, PDRO, PP7157; SOURCE 34 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAGULATOR COMPLEX, SCAFFOLD, ROADBLOCK, LYSOSOME, MTOR SIGNALING, KEYWDS 2 CELL GROWTH, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR R.YONEHARA,S.NADA,T.NAKAI,M.NAKAI,A.KITAMURA,A.OGAWA,H.NAKATSUMI, AUTHOR 2 K.I.NAKAYAMA,S.LI,D.M.STANDLEY,E.YAMASHITA,A.NAKAGAWA,M.OKADA REVDAT 2 22-NOV-23 5X6U 1 REMARK REVDAT 1 06-DEC-17 5X6U 0 JRNL AUTH R.YONEHARA,S.NADA,T.NAKAI,M.NAKAI,A.KITAMURA,A.OGAWA, JRNL AUTH 2 H.NAKATSUMI,K.I.NAKAYAMA,S.LI,D.M.STANDLEY,E.YAMASHITA, JRNL AUTH 3 A.NAKAGAWA,M.OKADA JRNL TITL STRUCTURAL BASIS FOR THE ASSEMBLY OF THE RAGULATOR-RAG JRNL TITL 2 GTPASE COMPLEX. JRNL REF NAT COMMUN V. 8 1625 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 29158492 JRNL DOI 10.1038/S41467-017-01762-3 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 133.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 26910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1291 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.49 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.60 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2738 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2186 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2596 REMARK 3 BIN R VALUE (WORKING SET) : 0.2161 REMARK 3 BIN FREE R VALUE : 0.2649 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.19 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 142 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3799 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.07890 REMARK 3 B22 (A**2) : 4.07890 REMARK 3 B33 (A**2) : -8.15770 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.290 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.273 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.213 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.264 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.212 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3854 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5223 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1344 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 99 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 556 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3854 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 514 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4485 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.18 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.11 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.02 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 33.5388 -37.4134 -9.9337 REMARK 3 T TENSOR REMARK 3 T11: -0.0974 T22: 0.0566 REMARK 3 T33: -0.0560 T12: -0.0032 REMARK 3 T13: -0.0381 T23: -0.0730 REMARK 3 L TENSOR REMARK 3 L11: 3.8377 L22: 2.5330 REMARK 3 L33: 1.3081 L12: 0.5258 REMARK 3 L13: 0.0840 L23: -0.2206 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: 0.5421 S13: -0.5426 REMARK 3 S21: -0.1506 S22: 0.1066 S23: 0.0360 REMARK 3 S31: 0.3166 S32: 0.1036 S33: -0.1237 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 56.6925 -28.1699 -8.1802 REMARK 3 T TENSOR REMARK 3 T11: -0.1753 T22: 0.2423 REMARK 3 T33: -0.1138 T12: 0.0171 REMARK 3 T13: 0.0219 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 3.9935 L22: 1.3939 REMARK 3 L33: 0.7318 L12: -0.0573 REMARK 3 L13: -0.4293 L23: 0.0705 REMARK 3 S TENSOR REMARK 3 S11: 0.0491 S12: 0.5118 S13: -0.2108 REMARK 3 S21: -0.1692 S22: -0.0396 S23: -0.0789 REMARK 3 S31: 0.1102 S32: 0.1312 S33: -0.0095 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 35.2658 -11.1554 0.6442 REMARK 3 T TENSOR REMARK 3 T11: -0.1017 T22: 0.0173 REMARK 3 T33: 0.0276 T12: -0.0548 REMARK 3 T13: 0.0741 T23: 0.1520 REMARK 3 L TENSOR REMARK 3 L11: 3.1617 L22: 2.2273 REMARK 3 L33: 2.0485 L12: -0.0300 REMARK 3 L13: 0.7521 L23: 0.3383 REMARK 3 S TENSOR REMARK 3 S11: 0.0329 S12: 0.3582 S13: 0.3619 REMARK 3 S21: 0.0060 S22: 0.0957 S23: 0.0037 REMARK 3 S31: -0.0918 S32: 0.3235 S33: -0.1286 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 15.0581 -8.7939 -5.6929 REMARK 3 T TENSOR REMARK 3 T11: -0.1727 T22: -0.0457 REMARK 3 T33: 0.1157 T12: -0.0401 REMARK 3 T13: 0.0274 T23: 0.1520 REMARK 3 L TENSOR REMARK 3 L11: 3.4951 L22: 3.3556 REMARK 3 L33: 2.9073 L12: -0.1478 REMARK 3 L13: 0.7069 L23: -1.4268 REMARK 3 S TENSOR REMARK 3 S11: -0.1573 S12: 0.3018 S13: 0.4258 REMARK 3 S21: -0.0754 S22: 0.0037 S23: 0.3613 REMARK 3 S31: -0.1630 S32: -0.1336 S33: 0.1536 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { E|* } REMARK 3 ORIGIN FOR THE GROUP (A): 27.6917 -24.0410 -3.2524 REMARK 3 T TENSOR REMARK 3 T11: -0.0600 T22: -0.0590 REMARK 3 T33: -0.2327 T12: -0.0230 REMARK 3 T13: 0.0186 T23: 0.1520 REMARK 3 L TENSOR REMARK 3 L11: 2.3430 L22: 2.1612 REMARK 3 L33: 0.9923 L12: -0.1076 REMARK 3 L13: 0.0442 L23: 0.5944 REMARK 3 S TENSOR REMARK 3 S11: 0.0290 S12: 0.3200 S13: 0.0980 REMARK 3 S21: -0.0091 S22: 0.0596 S23: 0.2530 REMARK 3 S31: 0.1154 S32: -0.0143 S33: -0.0886 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5X6U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1300002994. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26934 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 133.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1VET, 3MSH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL, 2-PROPANOL, 1,6-HEXANDIOL, REMARK 280 1,4-BUTANDIOL, 1-BUTANOL, 1,3-PROPANEDIOL, PEG 100, PEG 3350, 2- REMARK 280 METHYL-2,4-PENTANEDIOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.57350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.78675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.36025 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.57350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.36025 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 18.78675 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 SER A 124 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 ARG B 3 REMARK 465 ASN B 61 REMARK 465 GLN B 62 REMARK 465 ALA B 63 REMARK 465 PHE B 64 REMARK 465 ASN B 65 REMARK 465 MET D 1 REMARK 465 PRO D 96 REMARK 465 ILE D 97 REMARK 465 ASP D 98 REMARK 465 VAL D 99 REMARK 465 GLY E 39 REMARK 465 ALA E 40 REMARK 465 ALA E 41 REMARK 465 SER E 42 REMARK 465 LEU E 43 REMARK 465 PRO E 44 REMARK 465 SER E 45 REMARK 465 ALA E 46 REMARK 465 ARG E 47 REMARK 465 THR E 48 REMARK 465 ASP E 49 REMARK 465 GLU E 50 REMARK 465 GLN E 51 REMARK 465 ALA E 52 REMARK 465 LEU E 53 REMARK 465 LEU E 54 REMARK 465 SER E 55 REMARK 465 SER E 56 REMARK 465 ILE E 57 REMARK 465 LEU E 58 REMARK 465 ALA E 59 REMARK 465 LYS E 60 REMARK 465 THR E 61 REMARK 465 ALA E 62 REMARK 465 SER E 63 REMARK 465 ASN E 64 REMARK 465 ILE E 65 REMARK 465 ILE E 66 REMARK 465 ASP E 67 REMARK 465 VAL E 68 REMARK 465 SER E 69 REMARK 465 ALA E 70 REMARK 465 ALA E 71 REMARK 465 ASP E 72 REMARK 465 SER E 73 REMARK 465 GLN E 74 REMARK 465 GLY E 75 REMARK 465 MET E 76 REMARK 465 GLU E 77 REMARK 465 LYS E 151 REMARK 465 GLU E 152 REMARK 465 GLU E 153 REMARK 465 LEU E 154 REMARK 465 VAL E 155 REMARK 465 VAL E 156 REMARK 465 GLN E 157 REMARK 465 PHE E 158 REMARK 465 GLY E 159 REMARK 465 ILE E 160 REMARK 465 PRO E 161 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 66 -166.80 67.69 REMARK 500 LEU A 86 122.98 -29.07 REMARK 500 ASP B 41 111.93 -35.33 REMARK 500 ASP B 67 100.33 -3.12 REMARK 500 ALA B 87 -123.26 51.83 REMARK 500 SER D 22 -74.71 -114.74 REMARK 500 GLU D 23 62.63 -107.16 REMARK 500 ASN D 35 77.06 41.19 REMARK 500 ARG D 54 143.64 -171.32 REMARK 500 MET D 59 -155.17 -118.17 REMARK 500 PRO D 62 -8.52 -58.98 REMARK 500 GLN E 114 68.30 -119.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5X6V RELATED DB: PDB DBREF 5X6U A 2 124 UNP Q9UHA4 LTOR3_HUMAN 2 124 DBREF 5X6U B 1 125 UNP Q9Y2Q5 LTOR2_HUMAN 1 125 DBREF 5X6U C 1 91 UNP O43504 LTOR5_HUMAN 1 91 DBREF 5X6U D 1 99 UNP Q0VGL1 LTOR4_HUMAN 1 99 DBREF 5X6U E 42 161 UNP Q6IAA8 LTOR1_HUMAN 42 161 SEQADV 5X6U MET A -2 UNP Q9UHA4 EXPRESSION TAG SEQADV 5X6U GLY A -1 UNP Q9UHA4 EXPRESSION TAG SEQADV 5X6U SER A 0 UNP Q9UHA4 EXPRESSION TAG SEQADV 5X6U SER A 1 UNP Q9UHA4 EXPRESSION TAG SEQADV 5X6U GLY E 39 UNP Q6IAA8 EXPRESSION TAG SEQADV 5X6U ALA E 40 UNP Q6IAA8 EXPRESSION TAG SEQADV 5X6U ALA E 41 UNP Q6IAA8 EXPRESSION TAG SEQADV 5X6U ASP E 98 UNP Q6IAA8 SER 98 ENGINEERED MUTATION SEQRES 1 A 127 MET GLY SER SER ALA ASP ASP LEU LYS ARG PHE LEU TYR SEQRES 2 A 127 LYS LYS LEU PRO SER VAL GLU GLY LEU HIS ALA ILE VAL SEQRES 3 A 127 VAL SER ASP ARG ASP GLY VAL PRO VAL ILE LYS VAL ALA SEQRES 4 A 127 ASN ASP ASN ALA PRO GLU HIS ALA LEU ARG PRO GLY PHE SEQRES 5 A 127 LEU SER THR PHE ALA LEU ALA THR ASP GLN GLY SER LYS SEQRES 6 A 127 LEU GLY LEU SER LYS ASN LYS SER ILE ILE CYS TYR TYR SEQRES 7 A 127 ASN THR TYR GLN VAL VAL GLN PHE ASN ARG LEU PRO LEU SEQRES 8 A 127 VAL VAL SER PHE ILE ALA SER SER SER ALA ASN THR GLY SEQRES 9 A 127 LEU ILE VAL SER LEU GLU LYS GLU LEU ALA PRO LEU PHE SEQRES 10 A 127 GLU GLU LEU ARG GLN VAL VAL GLU VAL SER SEQRES 1 B 125 MET LEU ARG PRO LYS ALA LEU THR GLN VAL LEU SER GLN SEQRES 2 B 125 ALA ASN THR GLY GLY VAL GLN SER THR LEU LEU LEU ASN SEQRES 3 B 125 ASN GLU GLY SER LEU LEU ALA TYR SER GLY TYR GLY ASP SEQRES 4 B 125 THR ASP ALA ARG VAL THR ALA ALA ILE ALA SER ASN ILE SEQRES 5 B 125 TRP ALA ALA TYR ASP ARG ASN GLY ASN GLN ALA PHE ASN SEQRES 6 B 125 GLU ASP ASN LEU LYS PHE ILE LEU MET ASP CYS MET GLU SEQRES 7 B 125 GLY ARG VAL ALA ILE THR ARG VAL ALA ASN LEU LEU LEU SEQRES 8 B 125 CYS MET TYR ALA LYS GLU THR VAL GLY PHE GLY MET LEU SEQRES 9 B 125 LYS ALA LYS ALA GLN ALA LEU VAL GLN TYR LEU GLU GLU SEQRES 10 B 125 PRO LEU THR GLN VAL ALA ALA SER SEQRES 1 C 91 MET GLU ALA THR LEU GLU GLN HIS LEU GLU ASP THR MET SEQRES 2 C 91 LYS ASN PRO SER ILE VAL GLY VAL LEU CYS THR ASP SER SEQRES 3 C 91 GLN GLY LEU ASN LEU GLY CYS ARG GLY THR LEU SER ASP SEQRES 4 C 91 GLU HIS ALA GLY VAL ILE SER VAL LEU ALA GLN GLN ALA SEQRES 5 C 91 ALA LYS LEU THR SER ASP PRO THR ASP ILE PRO VAL VAL SEQRES 6 C 91 CYS LEU GLU SER ASP ASN GLY ASN ILE MET ILE GLN LYS SEQRES 7 C 91 HIS ASP GLY ILE THR VAL ALA VAL HIS LYS MET ALA SER SEQRES 1 D 99 MET THR SER ALA LEU THR GLN GLY LEU GLU ARG ILE PRO SEQRES 2 D 99 ASP GLN LEU GLY TYR LEU VAL LEU SER GLU GLY ALA VAL SEQRES 3 D 99 LEU ALA SER SER GLY ASP LEU GLU ASN ASP GLU GLN ALA SEQRES 4 D 99 ALA SER ALA ILE SER GLU LEU VAL SER THR ALA CYS GLY SEQRES 5 D 99 PHE ARG LEU HIS ARG GLY MET ASN VAL PRO PHE LYS ARG SEQRES 6 D 99 LEU SER VAL VAL PHE GLY GLU HIS THR LEU LEU VAL THR SEQRES 7 D 99 VAL SER GLY GLN ARG VAL PHE VAL VAL LYS ARG GLN ASN SEQRES 8 D 99 ARG GLY ARG GLU PRO ILE ASP VAL SEQRES 1 E 123 GLY ALA ALA SER LEU PRO SER ALA ARG THR ASP GLU GLN SEQRES 2 E 123 ALA LEU LEU SER SER ILE LEU ALA LYS THR ALA SER ASN SEQRES 3 E 123 ILE ILE ASP VAL SER ALA ALA ASP SER GLN GLY MET GLU SEQRES 4 E 123 GLN HIS GLU TYR MET ASP ARG ALA ARG GLN TYR SER THR SEQRES 5 E 123 ARG LEU ALA VAL LEU SER SER ASP LEU THR HIS TRP LYS SEQRES 6 E 123 LYS LEU PRO PRO LEU PRO SER LEU THR SER GLN PRO HIS SEQRES 7 E 123 GLN VAL LEU ALA SER GLU PRO ILE PRO PHE SER ASP LEU SEQRES 8 E 123 GLN GLN VAL SER ARG ILE ALA ALA TYR ALA TYR SER ALA SEQRES 9 E 123 LEU SER GLN ILE ARG VAL ASP ALA LYS GLU GLU LEU VAL SEQRES 10 E 123 VAL GLN PHE GLY ILE PRO FORMUL 6 HOH *130(H2 O) HELIX 1 AA1 SER A 0 LEU A 13 1 14 HELIX 2 AA2 PRO A 14 VAL A 16 5 3 HELIX 3 AA3 PRO A 41 LEU A 45 5 5 HELIX 4 AA4 ARG A 46 SER A 51 1 6 HELIX 5 AA5 SER A 51 SER A 61 1 11 HELIX 6 AA6 ASN A 99 ARG A 118 1 20 HELIX 7 AA7 GLN A 119 VAL A 121 5 3 HELIX 8 AA8 ALA B 6 GLN B 13 1 8 HELIX 9 AA9 ASP B 41 GLY B 60 1 20 HELIX 10 AB1 GLY B 100 SER B 125 1 26 HELIX 11 AB2 GLU C 2 MET C 13 1 12 HELIX 12 AB3 SER C 38 GLU C 40 5 3 HELIX 13 AB4 HIS C 41 LYS C 54 1 14 HELIX 14 AB5 SER D 3 ARG D 11 1 9 HELIX 15 AB6 ASP D 36 PHE D 53 1 18 HELIX 16 AB7 HIS E 79 VAL E 94 1 16 HELIX 17 AB8 LEU E 99 LEU E 105 5 7 HELIX 18 AB9 GLN E 114 SER E 121 1 8 HELIX 19 AC1 PRO E 125 LEU E 143 1 19 HELIX 20 AC2 SER E 144 ILE E 146 5 3 SHEET 1 AA110 PRO A 31 ALA A 36 0 SHEET 2 AA110 LEU A 19 SER A 25 -1 N VAL A 24 O VAL A 32 SHEET 3 AA110 LEU A 88 SER A 95 -1 O SER A 91 N VAL A 23 SHEET 4 AA110 TYR A 78 ARG A 85 -1 N PHE A 83 O VAL A 90 SHEET 5 AA110 ASN A 68 TYR A 75 -1 N CYS A 73 O VAL A 80 SHEET 6 AA110 LEU B 69 CYS B 76 -1 O ASP B 75 N LYS A 69 SHEET 7 AA110 GLY B 79 VAL B 86 -1 O ILE B 83 N ILE B 72 SHEET 8 AA110 LEU B 89 ALA B 95 -1 O LEU B 91 N THR B 84 SHEET 9 AA110 VAL B 19 ASN B 26 -1 N LEU B 23 O CYS B 92 SHEET 10 AA110 LEU B 31 GLY B 36 -1 O ALA B 33 N LEU B 24 SHEET 1 AA210 ASN C 30 GLY C 35 0 SHEET 2 AA210 ILE C 18 THR C 24 -1 N CYS C 23 O LEU C 31 SHEET 3 AA210 ILE C 82 MET C 89 -1 O THR C 83 N THR C 24 SHEET 4 AA210 GLY C 72 HIS C 79 -1 N HIS C 79 O ILE C 82 SHEET 5 AA210 VAL C 64 GLU C 68 -1 N VAL C 65 O ILE C 76 SHEET 6 AA210 ARG D 65 VAL D 69 -1 O ARG D 65 N GLU C 68 SHEET 7 AA210 HIS D 73 SER D 80 -1 O VAL D 77 N LEU D 66 SHEET 8 AA210 ARG D 83 GLN D 90 -1 O VAL D 87 N LEU D 76 SHEET 9 AA210 GLN D 15 LEU D 21 -1 N LEU D 16 O LYS D 88 SHEET 10 AA210 VAL D 26 GLY D 31 -1 O LEU D 27 N VAL D 20 CISPEP 1 LEU A 86 PRO A 87 0 3.13 CRYST1 133.038 133.038 75.147 90.00 90.00 90.00 P 41 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007517 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007517 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013307 0.00000