PDB Short entry for 5Y41
HEADER    TRANSCRIPTION                           31-JUL-17   5Y41              
TITLE     CRYSTAL STRUCTURE OF LIGAND-BOUND NURR1-LBD                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: NUCLEAR RECEPTOR SUBFAMILY 4 GROUP A MEMBER 2;             
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: UNP RESIDUES 328-598;                                      
COMPND   5 SYNONYM: IMMEDIATE-EARLY RESPONSE PROTEIN NOT,ORPHAN NUCLEAR RECEPTOR
COMPND   6 NURR1,TRANSCRIPTIONALLY-INDUCIBLE NUCLEAR RECEPTOR;                  
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: NR4A2, NOT, NURR1, TINUR;                                      
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PET-SUMO                                  
KEYWDS    NURR1, LBD, PROSTAGLANDIN, TRANSCRIPTION, MICHAEL ADDITION            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.SREEKANTH,J.LESCAR,H.S.YOON                                         
REVDAT   2   10-JUN-20 5Y41    1       JRNL                                     
REVDAT   1   26-DEC-18 5Y41    0                                                
JRNL        AUTH   S.RAJAN,Y.JANG,C.H.KIM,W.KIM,H.T.TOH,J.JEON,B.SONG,A.SERRA,  
JRNL        AUTH 2 J.LESCAR,J.Y.YOO,S.BELDAR,H.YE,C.KANG,X.W.LIU,M.FEITOSA,     
JRNL        AUTH 3 Y.KIM,D.HWANG,G.GOH,K.L.LIM,H.M.PARK,C.H.LEE,S.F.OH,         
JRNL        AUTH 4 G.A.PETSKO,H.S.YOON,K.S.KIM                                  
JRNL        TITL   PGE1 AND PGA1 BIND TO NURR1 AND ACTIVATE ITS TRANSCRIPTIONAL 
JRNL        TITL 2 FUNCTION.                                                    
JRNL        REF    NAT.CHEM.BIOL.                             2020              
JRNL        REFN                   ESSN 1552-4469                               
JRNL        PMID   32451509                                                     
JRNL        DOI    10.1038/S41589-020-0553-6                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.05 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.8.0158                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.4                           
REMARK   3   NUMBER OF REFLECTIONS             : 34059                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.207                           
REMARK   3   R VALUE            (WORKING SET) : 0.206                           
REMARK   3   FREE R VALUE                     : 0.253                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 3.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1071                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.05                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.10                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 2393                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 98.33                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.5010                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 83                           
REMARK   3   BIN FREE R VALUE                    : 0.4170                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3696                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 68                                      
REMARK   3   SOLVENT ATOMS            : 318                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 40.90                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.20000                                             
REMARK   3    B22 (A**2) : -1.19000                                             
REMARK   3    B33 (A**2) : 1.39000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.205         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.182         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.174         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.609        
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.953                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.918                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  3839 ; 0.014 ; 0.019       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  5186 ; 1.786 ; 1.991       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   460 ; 5.291 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   176 ;31.519 ;24.318       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   660 ;16.743 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    24 ;20.205 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   588 ; 0.113 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2868 ; 0.008 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1852 ; 1.071 ; 2.197       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  2308 ; 1.738 ; 3.284       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1987 ; 1.913 ; 2.489       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  5936 ; 6.459 ;32.115       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NCS TYPE: LOCAL                                                    
REMARK   3   NUMBER OF DIFFERENT NCS PAIRS  : 1                                 
REMARK   3  GROUP  CHAIN1    RANGE     CHAIN2     RANGE    COUNT RMS  WEIGHT    
REMARK   3    1     A   362    598       B   362    598   14694  0.10  0.05     
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 2                                          
REMARK   3                                                                      
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   A   362        A   598                          
REMARK   3    ORIGIN FOR THE GROUP (A):  11.9655 -25.1537 -19.7749              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.0092 T22:   0.0234                                     
REMARK   3      T33:   0.1030 T12:   0.0085                                     
REMARK   3      T13:  -0.0255 T23:  -0.0459                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.6333 L22:   3.0283                                     
REMARK   3      L33:   1.8998 L12:  -0.0172                                     
REMARK   3      L13:  -0.1350 L23:  -1.4725                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0060 S12:  -0.0761 S13:   0.1024                       
REMARK   3      S21:   0.0621 S22:  -0.0336 S23:  -0.0528                       
REMARK   3      S31:  -0.0820 S32:   0.0520 S33:   0.0396                       
REMARK   3                                                                      
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    NUMBER OF COMPONENTS GROUP : 1                                    
REMARK   3    COMPONENTS        C SSSEQI   TO  C SSSEQI                         
REMARK   3    RESIDUE RANGE :   B   360        B   598                          
REMARK   3    ORIGIN FOR THE GROUP (A):  22.8522 -55.7218 -13.7993              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.0121 T22:   0.0541                                     
REMARK   3      T33:   0.1276 T12:  -0.0208                                     
REMARK   3      T13:  -0.0281 T23:   0.0682                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.2033 L22:   3.7101                                     
REMARK   3      L33:   2.5891 L12:  -1.3661                                     
REMARK   3      L13:  -0.7373 L23:   1.1976                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0195 S12:  -0.0400 S13:  -0.0468                       
REMARK   3      S21:   0.0790 S22:   0.0324 S23:  -0.0826                       
REMARK   3      S31:   0.1066 S32:  -0.1694 S33:  -0.0130                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5Y41 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-AUG-17.                  
REMARK 100 THE DEPOSITION ID IS D_1300004623.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 04-SEP-16                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SLS                                
REMARK 200  BEAMLINE                       : X06DA                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.00003                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 2M-F               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : IMOSFLM                            
REMARK 200  DATA SCALING SOFTWARE          : SCALA                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 35308                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.050                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 75.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.8                               
REMARK 200  DATA REDUNDANCY                : 4.800                              
REMARK 200  R MERGE                    (I) : 0.07100                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 5.5000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.16                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 4.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.61600                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.300                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 1OVL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 45.14                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MES PH 5.5 AND MGCL2, VAPOR    
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 291K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2                        
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z                                                 
REMARK 290       3555   -X+1/2,Y+1/2,-Z                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000       44.26000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       65.73000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       44.26000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       65.73000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2, 3                                                 
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 3                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3040 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 21450 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH B 844  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   328                                                      
REMARK 465     VAL A   329                                                      
REMARK 465     LYS A   330                                                      
REMARK 465     GLU A   331                                                      
REMARK 465     VAL A   332                                                      
REMARK 465     VAL A   333                                                      
REMARK 465     ARG A   334                                                      
REMARK 465     THR A   335                                                      
REMARK 465     ASP A   336                                                      
REMARK 465     SER A   337                                                      
REMARK 465     LEU A   338                                                      
REMARK 465     LYS A   339                                                      
REMARK 465     GLY A   340                                                      
REMARK 465     ARG A   341                                                      
REMARK 465     ARG A   342                                                      
REMARK 465     GLY A   343                                                      
REMARK 465     ARG A   344                                                      
REMARK 465     LEU A   345                                                      
REMARK 465     PRO A   346                                                      
REMARK 465     SER A   347                                                      
REMARK 465     LYS A   348                                                      
REMARK 465     PRO A   349                                                      
REMARK 465     LYS A   350                                                      
REMARK 465     SER A   351                                                      
REMARK 465     PRO A   352                                                      
REMARK 465     GLN A   353                                                      
REMARK 465     GLU A   354                                                      
REMARK 465     PRO A   355                                                      
REMARK 465     SER A   356                                                      
REMARK 465     PRO A   357                                                      
REMARK 465     PRO A   358                                                      
REMARK 465     SER A   359                                                      
REMARK 465     PRO A   360                                                      
REMARK 465     PRO A   361                                                      
REMARK 465     TYR A   393                                                      
REMARK 465     GLN A   394                                                      
REMARK 465     MET A   395                                                      
REMARK 465     SER A   396                                                      
REMARK 465     GLY A   397                                                      
REMARK 465     MET B   328                                                      
REMARK 465     VAL B   329                                                      
REMARK 465     LYS B   330                                                      
REMARK 465     GLU B   331                                                      
REMARK 465     VAL B   332                                                      
REMARK 465     VAL B   333                                                      
REMARK 465     ARG B   334                                                      
REMARK 465     THR B   335                                                      
REMARK 465     ASP B   336                                                      
REMARK 465     SER B   337                                                      
REMARK 465     LEU B   338                                                      
REMARK 465     LYS B   339                                                      
REMARK 465     GLY B   340                                                      
REMARK 465     ARG B   341                                                      
REMARK 465     ARG B   342                                                      
REMARK 465     GLY B   343                                                      
REMARK 465     ARG B   344                                                      
REMARK 465     LEU B   345                                                      
REMARK 465     PRO B   346                                                      
REMARK 465     SER B   347                                                      
REMARK 465     LYS B   348                                                      
REMARK 465     PRO B   349                                                      
REMARK 465     LYS B   350                                                      
REMARK 465     SER B   351                                                      
REMARK 465     PRO B   352                                                      
REMARK 465     GLN B   353                                                      
REMARK 465     GLU B   354                                                      
REMARK 465     PRO B   355                                                      
REMARK 465     SER B   356                                                      
REMARK 465     PRO B   357                                                      
REMARK 465     PRO B   358                                                      
REMARK 465     SER B   359                                                      
REMARK 465     ASP B   392                                                      
REMARK 465     TYR B   393                                                      
REMARK 465     GLN B   394                                                      
REMARK 465     MET B   395                                                      
REMARK 465     SER B   396                                                      
REMARK 465     GLY B   397                                                      
REMARK 465     ASP B   398                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A 454   NE  -  CZ  -  NH1 ANGL. DEV. =   5.6 DEGREES          
REMARK 500    ARG A 454   NE  -  CZ  -  NH2 ANGL. DEV. =  -8.2 DEGREES          
REMARK 500    LEU A 546   CA  -  CB  -  CG  ANGL. DEV. =  15.2 DEGREES          
REMARK 500    LEU A 578   CA  -  CB  -  CG  ANGL. DEV. =  14.9 DEGREES          
REMARK 500    LEU A 578   CB  -  CG  -  CD2 ANGL. DEV. = -12.1 DEGREES          
REMARK 500    ARG B 454   NE  -  CZ  -  NH1 ANGL. DEV. =   4.3 DEGREES          
REMARK 500    ARG B 454   NE  -  CZ  -  NH2 ANGL. DEV. =  -6.0 DEGREES          
REMARK 500    LEU B 462   CA  -  CB  -  CG  ANGL. DEV. = -17.3 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASN A 390       69.37   -157.79                                   
REMARK 500    ASN B 390       46.71   -147.85                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A 868        DISTANCE =  8.20 ANGSTROMS                       
REMARK 525    HOH A 869        DISTANCE =  8.35 ANGSTROMS                       
REMARK 525    HOH B 848        DISTANCE =  6.71 ANGSTROMS                       
REMARK 525    HOH B 849        DISTANCE =  7.66 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 605  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 PHE A 598   O                                                      
REMARK 620 2 HOH A 736   O    90.6                                              
REMARK 620 3 HOH A 784   O    72.8 143.3                                        
REMARK 620 4 ASP B 594   OD1  85.5   5.3 141.9                                  
REMARK 620 5 HOH B 729   O   175.7  93.7 104.0  98.7                            
REMARK 620 N                    1     2     3     4                             
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue RPG A 601                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 602                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 604                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 605                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 602                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide RPG B 601 and CYS B    
REMARK 800  566                                                                 
DBREF  5Y41 A  328   598  UNP    P43354   NR4A2_HUMAN    328    598             
DBREF  5Y41 B  328   598  UNP    P43354   NR4A2_HUMAN    328    598             
SEQRES   1 A  271  MET VAL LYS GLU VAL VAL ARG THR ASP SER LEU LYS GLY          
SEQRES   2 A  271  ARG ARG GLY ARG LEU PRO SER LYS PRO LYS SER PRO GLN          
SEQRES   3 A  271  GLU PRO SER PRO PRO SER PRO PRO VAL SER LEU ILE SER          
SEQRES   4 A  271  ALA LEU VAL ARG ALA HIS VAL ASP SER ASN PRO ALA MET          
SEQRES   5 A  271  THR SER LEU ASP TYR SER ARG PHE GLN ALA ASN PRO ASP          
SEQRES   6 A  271  TYR GLN MET SER GLY ASP ASP THR GLN HIS ILE GLN GLN          
SEQRES   7 A  271  PHE TYR ASP LEU LEU THR GLY SER MET GLU ILE ILE ARG          
SEQRES   8 A  271  GLY TRP ALA GLU LYS ILE PRO GLY PHE ALA ASP LEU PRO          
SEQRES   9 A  271  LYS ALA ASP GLN ASP LEU LEU PHE GLU SER ALA PHE LEU          
SEQRES  10 A  271  GLU LEU PHE VAL LEU ARG LEU ALA TYR ARG SER ASN PRO          
SEQRES  11 A  271  VAL GLU GLY LYS LEU ILE PHE CYS ASN GLY VAL VAL LEU          
SEQRES  12 A  271  HIS ARG LEU GLN CYS VAL ARG GLY PHE GLY GLU TRP ILE          
SEQRES  13 A  271  ASP SER ILE VAL GLU PHE SER SER ASN LEU GLN ASN MET          
SEQRES  14 A  271  ASN ILE ASP ILE SER ALA PHE SER CYS ILE ALA ALA LEU          
SEQRES  15 A  271  ALA MET VAL THR GLU ARG HIS GLY LEU LYS GLU PRO LYS          
SEQRES  16 A  271  ARG VAL GLU GLU LEU GLN ASN LYS ILE VAL ASN CYS LEU          
SEQRES  17 A  271  LYS ASP HIS VAL THR PHE ASN ASN GLY GLY LEU ASN ARG          
SEQRES  18 A  271  PRO ASN TYR LEU SER LYS LEU LEU GLY LYS LEU PRO GLU          
SEQRES  19 A  271  LEU ARG THR LEU CYS THR GLN GLY LEU GLN ARG ILE PHE          
SEQRES  20 A  271  TYR LEU LYS LEU GLU ASP LEU VAL PRO PRO PRO ALA ILE          
SEQRES  21 A  271  ILE ASP LYS LEU PHE LEU ASP THR LEU PRO PHE                  
SEQRES   1 B  271  MET VAL LYS GLU VAL VAL ARG THR ASP SER LEU LYS GLY          
SEQRES   2 B  271  ARG ARG GLY ARG LEU PRO SER LYS PRO LYS SER PRO GLN          
SEQRES   3 B  271  GLU PRO SER PRO PRO SER PRO PRO VAL SER LEU ILE SER          
SEQRES   4 B  271  ALA LEU VAL ARG ALA HIS VAL ASP SER ASN PRO ALA MET          
SEQRES   5 B  271  THR SER LEU ASP TYR SER ARG PHE GLN ALA ASN PRO ASP          
SEQRES   6 B  271  TYR GLN MET SER GLY ASP ASP THR GLN HIS ILE GLN GLN          
SEQRES   7 B  271  PHE TYR ASP LEU LEU THR GLY SER MET GLU ILE ILE ARG          
SEQRES   8 B  271  GLY TRP ALA GLU LYS ILE PRO GLY PHE ALA ASP LEU PRO          
SEQRES   9 B  271  LYS ALA ASP GLN ASP LEU LEU PHE GLU SER ALA PHE LEU          
SEQRES  10 B  271  GLU LEU PHE VAL LEU ARG LEU ALA TYR ARG SER ASN PRO          
SEQRES  11 B  271  VAL GLU GLY LYS LEU ILE PHE CYS ASN GLY VAL VAL LEU          
SEQRES  12 B  271  HIS ARG LEU GLN CYS VAL ARG GLY PHE GLY GLU TRP ILE          
SEQRES  13 B  271  ASP SER ILE VAL GLU PHE SER SER ASN LEU GLN ASN MET          
SEQRES  14 B  271  ASN ILE ASP ILE SER ALA PHE SER CYS ILE ALA ALA LEU          
SEQRES  15 B  271  ALA MET VAL THR GLU ARG HIS GLY LEU LYS GLU PRO LYS          
SEQRES  16 B  271  ARG VAL GLU GLU LEU GLN ASN LYS ILE VAL ASN CYS LEU          
SEQRES  17 B  271  LYS ASP HIS VAL THR PHE ASN ASN GLY GLY LEU ASN ARG          
SEQRES  18 B  271  PRO ASN TYR LEU SER LYS LEU LEU GLY LYS LEU PRO GLU          
SEQRES  19 B  271  LEU ARG THR LEU CYS THR GLN GLY LEU GLN ARG ILE PHE          
SEQRES  20 B  271  TYR LEU LYS LEU GLU ASP LEU VAL PRO PRO PRO ALA ILE          
SEQRES  21 B  271  ILE ASP LYS LEU PHE LEU ASP THR LEU PRO PHE                  
HET    RPG  A 601      24                                                       
HET    PGE  A 602      10                                                       
HET    PEG  A 603       7                                                       
HET     CL  A 604       1                                                       
HET     MG  A 605       1                                                       
HET    RPG  B 601      24                                                       
HET     CL  B 602       1                                                       
HETNAM     RPG (13E,15S)-15-HYDROXY-9-OXOPROSTA-10,13-DIEN-1-OIC ACID           
HETNAM     PGE TRIETHYLENE GLYCOL                                               
HETNAM     PEG DI(HYDROXYETHYL)ETHER                                            
HETNAM      CL CHLORIDE ION                                                     
HETNAM      MG MAGNESIUM ION                                                    
HETSYN     RPG PROSTAGLANDIN A1 (PGA1)                                          
FORMUL   3  RPG    2(C20 H32 O4)                                                
FORMUL   4  PGE    C6 H14 O4                                                    
FORMUL   5  PEG    C4 H10 O3                                                    
FORMUL   6   CL    2(CL 1-)                                                     
FORMUL   7   MG    MG 2+                                                        
FORMUL  10  HOH   *318(H2 O)                                                    
HELIX    1 AA1 SER A  363  ASP A  374  1                                  12    
HELIX    2 AA2 ALA A  378  LEU A  382  5                                   5    
HELIX    3 AA3 ASP A  399  LYS A  423  1                                  25    
HELIX    4 AA4 PRO A  431  SER A  455  1                                  25    
HELIX    5 AA5 ASN A  456  GLU A  459  5                                   4    
HELIX    6 AA6 ARG A  472  GLY A  480  1                                   9    
HELIX    7 AA7 GLU A  481  ASN A  495  1                                  15    
HELIX    8 AA8 ASP A  499  VAL A  512  1                                  14    
HELIX    9 AA9 GLU A  520  ASN A  543  1                                  24    
HELIX   10 AB1 ARG A  548  GLY A  557  1                                  10    
HELIX   11 AB2 GLY A  557  ASP A  580  1                                  24    
HELIX   12 AB3 PRO A  585  LEU A  596  1                                  12    
HELIX   13 AB4 SER B  363  ASP B  374  1                                  12    
HELIX   14 AB5 ALA B  378  LEU B  382  5                                   5    
HELIX   15 AB6 THR B  400  LYS B  423  1                                  24    
HELIX   16 AB7 GLY B  426  LEU B  430  5                                   5    
HELIX   17 AB8 PRO B  431  SER B  455  1                                  25    
HELIX   18 AB9 ASN B  456  GLU B  459  5                                   4    
HELIX   19 AC1 ARG B  472  GLY B  480  1                                   9    
HELIX   20 AC2 GLU B  481  ASN B  495  1                                  15    
HELIX   21 AC3 ASP B  499  VAL B  512  1                                  14    
HELIX   22 AC4 GLU B  520  ASN B  543  1                                  24    
HELIX   23 AC5 ARG B  548  ASP B  580  1                                  33    
HELIX   24 AC6 PRO B  585  LEU B  596  1                                  12    
SHEET    1 AA1 2 LYS A 461  ILE A 463  0                                        
SHEET    2 AA1 2 VAL A 469  HIS A 471 -1  O  LEU A 470   N  LEU A 462           
SHEET    1 AA2 2 LYS B 461  ILE B 463  0                                        
SHEET    2 AA2 2 VAL B 469  HIS B 471 -1  O  LEU B 470   N  LEU B 462           
LINK         SG  CYS A 566                 C11 RPG A 601     1555   1555  1.64  
LINK         O   PHE A 598                MG    MG A 605     1555   1555  2.22  
LINK         SG  CYS B 566                 C11 RPG B 601     1555   1555  1.62  
LINK        MG    MG A 605                 O   HOH A 736     1555   1555  2.23  
LINK        MG    MG A 605                 O   HOH A 784     1555   1555  2.78  
LINK         OD1 ASP B 594                MG    MG A 605     1555   4544  2.18  
LINK        MG    MG A 605                 O   HOH B 729     1555   3554  1.93  
SITE     1 AC1 13 GLU A 440  SER A 441  PHE A 443  LEU A 444                    
SITE     2 AC1 13 ARG A 563  CYS A 566  THR A 567  LEU A 591                    
SITE     3 AC1 13 PHE A 592  THR A 595  PRO A 597  HOH A 799                    
SITE     4 AC1 13 ALA B 586                                                     
SITE     1 AC2 12 ASP A 499  ILE A 500  SER A 501  HIS A 538                    
SITE     2 AC2 12 PHE A 541  ASN A 542  HOH A 733  ILE B 365                    
SITE     3 AC2 12 SER B 366  SER B 501  HIS B 538  PHE B 541                    
SITE     1 AC3  6 SER A 413  ILE A 417  ARG A 450  ARG A 454                    
SITE     2 AC3  6 CYS A 465  HOH A 769                                          
SITE     1 AC4  6 PHE A 598  HOH A 736  HOH A 784  ASP B 594                    
SITE     2 AC4  6 PHE B 598  HOH B 729                                          
SITE     1 AC5  6 SER B 413  ILE B 417  ARG B 450  ARG B 454                    
SITE     2 AC5  6 CYS B 465  HOH B 727                                          
SITE     1 AC6 17 GLU B 440  SER B 441  PHE B 443  LEU B 444                    
SITE     2 AC6 17 ARG B 515  HIS B 516  LEU B 562  ARG B 563                    
SITE     3 AC6 17 THR B 564  LEU B 565  THR B 567  GLN B 568                    
SITE     4 AC6 17 GLY B 569  LEU B 570  ILE B 573  THR B 595                    
SITE     5 AC6 17 HOH B 757                                                     
CRYST1   88.520  131.460   47.130  90.00  90.00  90.00 P 21 21 2     8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.011297  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.007607  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.021218        0.00000