PDB Short entry for 5Y7Y HEADER TRANSCRIPTION 18-AUG-17 5Y7Y TITLE CRYSTAL STRUCTURE OF AHRR/ARNT COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARYL HYDROCARBON RECEPTOR REPRESSOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AHRR,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 77,BHLHE77; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 82-147,154-230,257-271,301-312; COMPND 10 SYNONYM: ARNT PROTEIN; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AHRR, BHLHE77, KIAA1234; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 12 ORGANISM_COMMON: BOVINE; SOURCE 13 ORGANISM_TAXID: 9913; SOURCE 14 GENE: ARNT; SOURCE 15 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 16 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS TRANSCRIPTIONAL REGULATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.SAKURAI,T.SHIMIZU,U.OHTO REVDAT 3 27-MAR-24 5Y7Y 1 REMARK REVDAT 2 21-FEB-18 5Y7Y 1 JRNL REVDAT 1 20-SEP-17 5Y7Y 0 JRNL AUTH S.SAKURAI,T.SHIMIZU,U.OHTO JRNL TITL THE CRYSTAL STRUCTURE OF THE AHRR-ARNT HETERODIMER REVEALS JRNL TITL 2 THE STRUCTURAL BASIS OF THE REPRESSION OF AHR-MEDIATED JRNL TITL 3 TRANSCRIPTION. JRNL REF J. BIOL. CHEM. V. 292 17609 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28904176 JRNL DOI 10.1074/JBC.M117.812974 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1542 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2095 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3742 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.27000 REMARK 3 B22 (A**2) : 2.27000 REMARK 3 B33 (A**2) : -4.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.298 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.237 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.178 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.653 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3830 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3701 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5161 ; 0.967 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8487 ; 0.716 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 455 ; 5.513 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;32.753 ;22.967 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 680 ;13.602 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;11.639 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 583 ; 0.053 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4235 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 922 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1847 ; 2.092 ; 7.921 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1846 ; 2.086 ; 7.920 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2293 ; 3.784 ;11.837 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2294 ; 3.784 ;11.837 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1983 ; 1.635 ; 8.024 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1983 ; 1.635 ; 8.024 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2869 ; 2.966 ;11.986 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4160 ; 5.908 ;61.392 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4161 ; 5.908 ;61.395 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5Y7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1300004820. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30559 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 20000, HEPES, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.89200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.44600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.33800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 PRO A 24 REMARK 465 GLU A 25 REMARK 465 PHE A 26 REMARK 465 PRO A 27 REMARK 465 ALA A 28 REMARK 465 VAL A 29 REMARK 465 GLY A 30 REMARK 465 ALA A 31 REMARK 465 GLU A 32 REMARK 465 LYS A 33 REMARK 465 SER A 34 REMARK 465 ASN A 35 REMARK 465 PRO A 36 REMARK 465 SER A 37 REMARK 465 SER A 92 REMARK 465 ARG A 93 REMARK 465 GLN A 94 REMARK 465 PRO A 95 REMARK 465 ALA A 96 REMARK 465 ALA A 97 REMARK 465 GLY A 98 REMARK 465 ALA A 99 REMARK 465 PRO A 100 REMARK 465 SER A 101 REMARK 465 PRO A 102 REMARK 465 GLY A 103 REMARK 465 ASP A 104 REMARK 465 SER A 105 REMARK 465 CYS A 106 REMARK 465 PRO A 107 REMARK 465 LEU A 108 REMARK 465 ALA A 109 REMARK 465 GLY A 110 REMARK 465 SER A 111 REMARK 465 ALA A 112 REMARK 465 VAL A 113 REMARK 465 LEU A 114 REMARK 465 VAL A 184 REMARK 465 VAL A 185 REMARK 465 PHE A 186 REMARK 465 GLY A 187 REMARK 465 GLN A 188 REMARK 465 PRO A 189 REMARK 465 PRO A 190 REMARK 465 PRO A 191 REMARK 465 LEU A 192 REMARK 465 GLU A 193 REMARK 465 THR A 194 REMARK 465 GLY A 195 REMARK 465 TRP A 209 REMARK 465 GLY A 210 REMARK 465 THR A 211 REMARK 465 GLY A 212 REMARK 465 THR A 213 REMARK 465 LEU A 279 REMARK 465 PRO A 280 REMARK 465 GLY B 78 REMARK 465 PRO B 79 REMARK 465 GLU B 80 REMARK 465 PHE B 81 REMARK 465 SER B 82 REMARK 465 SER B 83 REMARK 465 ALA B 84 REMARK 465 ASP B 85 REMARK 465 LYS B 86 REMARK 465 GLU B 87 REMARK 465 ARG B 88 REMARK 465 LEU B 89 REMARK 465 ALA B 90 REMARK 465 ARG B 91 REMARK 465 GLU B 92 REMARK 465 ASN B 93 REMARK 465 HIS B 94 REMARK 465 GLU B 255 REMARK 465 ASN B 256 REMARK 465 MET B 257 REMARK 465 GLY B 258 REMARK 465 PRO B 301 REMARK 465 HIS B 302 REMARK 465 PHE B 303 REMARK 465 VAL B 304 REMARK 465 ALA B 328 REMARK 465 TRP B 329 REMARK 465 PRO B 330 REMARK 465 PRO B 331 REMARK 465 GLY B 332 REMARK 465 SER B 333 REMARK 465 LYS B 334 REMARK 465 PHE B 335 REMARK 465 GLN B 344 REMARK 465 VAL B 345 REMARK 465 THR B 346 REMARK 465 SER B 347 REMARK 465 SER B 348 REMARK 465 PRO B 349 REMARK 465 ASN B 350 REMARK 465 CYS B 351 REMARK 465 THR B 352 REMARK 465 ASP B 353 REMARK 465 MET B 354 REMARK 465 SER B 355 REMARK 465 ASN B 356 REMARK 465 VAL B 357 REMARK 465 CYS B 358 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CZ ARG A 41 OD1 ASP B 452 3555 1.56 REMARK 500 NE ARG A 41 OD1 ASP B 452 3555 1.84 REMARK 500 NH2 ARG A 41 OD1 ASP B 452 3555 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 236 -85.50 -104.94 REMARK 500 GLU B 98 78.81 -107.84 REMARK 500 ASN B 147 -71.37 -106.56 REMARK 500 VAL B 186 72.21 33.08 REMARK 500 ASP B 216 16.90 -140.65 REMARK 500 ASP B 217 111.15 -165.59 REMARK 500 VAL B 218 -9.28 76.67 REMARK 500 TYR B 450 -49.56 115.30 REMARK 500 ASP B 452 11.18 56.93 REMARK 500 ILE B 454 -174.06 -68.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 DBREF 5Y7Y A 27 280 UNP A9YTQ3 AHRR_HUMAN 27 280 DBREF 5Y7Y B 82 464 UNP Q9BE97 ARNT_BOVIN 82 464 SEQADV 5Y7Y GLY A 23 UNP A9YTQ3 EXPRESSION TAG SEQADV 5Y7Y PRO A 24 UNP A9YTQ3 EXPRESSION TAG SEQADV 5Y7Y GLU A 25 UNP A9YTQ3 EXPRESSION TAG SEQADV 5Y7Y PHE A 26 UNP A9YTQ3 EXPRESSION TAG SEQADV 5Y7Y GLY B 78 UNP Q9BE97 EXPRESSION TAG SEQADV 5Y7Y PRO B 79 UNP Q9BE97 EXPRESSION TAG SEQADV 5Y7Y GLU B 80 UNP Q9BE97 EXPRESSION TAG SEQADV 5Y7Y PHE B 81 UNP Q9BE97 EXPRESSION TAG SEQADV 5Y7Y B UNP Q9BE97 THR 148 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 149 DELETION SEQADV 5Y7Y B UNP Q9BE97 THR 150 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASP 151 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 152 DELETION SEQADV 5Y7Y B UNP Q9BE97 THR 153 DELETION SEQADV 5Y7Y B UNP Q9BE97 TYR 154 DELETION SEQADV 5Y7Y B UNP Q9BE97 ALA 231 DELETION SEQADV 5Y7Y B UNP Q9BE97 LEU 232 DELETION SEQADV 5Y7Y B UNP Q9BE97 THR 233 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 234 DELETION SEQADV 5Y7Y B UNP Q9BE97 ARG 235 DELETION SEQADV 5Y7Y B UNP Q9BE97 ILE 236 DELETION SEQADV 5Y7Y B UNP Q9BE97 LEU 237 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASP 238 DELETION SEQADV 5Y7Y B UNP Q9BE97 LEU 239 DELETION SEQADV 5Y7Y B UNP Q9BE97 LYS 240 DELETION SEQADV 5Y7Y B UNP Q9BE97 THR 241 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 242 DELETION SEQADV 5Y7Y B UNP Q9BE97 THR 243 DELETION SEQADV 5Y7Y B UNP Q9BE97 VAL 244 DELETION SEQADV 5Y7Y B UNP Q9BE97 LYS 245 DELETION SEQADV 5Y7Y B UNP Q9BE97 LYS 246 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLU 247 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 248 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLN 249 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLN 250 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 251 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 252 DELETION SEQADV 5Y7Y B UNP Q9BE97 MET 253 DELETION SEQADV 5Y7Y B UNP Q9BE97 ARG 254 DELETION SEQADV 5Y7Y B UNP Q9BE97 MET 255 DELETION SEQADV 5Y7Y B UNP Q9BE97 CYS 256 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 272 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 273 DELETION SEQADV 5Y7Y B UNP Q9BE97 VAL 274 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASP 275 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 276 DELETION SEQADV 5Y7Y B UNP Q9BE97 VAL 277 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 278 DELETION SEQADV 5Y7Y B UNP Q9BE97 MET 279 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASN 280 DELETION SEQADV 5Y7Y B UNP Q9BE97 ARG 281 DELETION SEQADV 5Y7Y B UNP Q9BE97 LEU 282 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 283 DELETION SEQADV 5Y7Y B UNP Q9BE97 PHE 284 DELETION SEQADV 5Y7Y B UNP Q9BE97 VAL 285 DELETION SEQADV 5Y7Y B UNP Q9BE97 ARG 286 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASN 287 DELETION SEQADV 5Y7Y B UNP Q9BE97 ARG 288 DELETION SEQADV 5Y7Y B UNP Q9BE97 CYS 289 DELETION SEQADV 5Y7Y B UNP Q9BE97 ARG 290 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASN 291 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 292 DELETION SEQADV 5Y7Y B UNP Q9BE97 LEU 293 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 294 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 295 DELETION SEQADV 5Y7Y B UNP Q9BE97 ALA 296 DELETION SEQADV 5Y7Y B UNP Q9BE97 LYS 297 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASP 298 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 299 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLU 300 DELETION SEQADV 5Y7Y B UNP Q9BE97 ALA 318 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 319 DELETION SEQADV 5Y7Y B UNP Q9BE97 VAL 320 DELETION SEQADV 5Y7Y B UNP Q9BE97 SER 321 DELETION SEQADV 5Y7Y B UNP Q9BE97 LEU 322 DELETION SEQADV 5Y7Y B UNP Q9BE97 PRO 323 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASP 324 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASP 325 DELETION SEQADV 5Y7Y B UNP Q9BE97 ASP 326 DELETION SEQADV 5Y7Y B UNP Q9BE97 PRO 327 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLU 328 DELETION SEQADV 5Y7Y B UNP Q9BE97 ALA 329 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLY 330 DELETION SEQADV 5Y7Y B UNP Q9BE97 GLN 331 DELETION SEQRES 1 A 258 GLY PRO GLU PHE PRO ALA VAL GLY ALA GLU LYS SER ASN SEQRES 2 A 258 PRO SER LYS ARG HIS ARG ASP ARG LEU ASN ALA GLU LEU SEQRES 3 A 258 ASP HIS LEU ALA SER LEU LEU PRO PHE PRO PRO ASP ILE SEQRES 4 A 258 ILE SER LYS LEU ASP LYS LEU SER VAL LEU ARG LEU SER SEQRES 5 A 258 VAL SER TYR LEU ARG VAL LYS SER PHE PHE GLN VAL VAL SEQRES 6 A 258 GLN GLU GLN SER SER ARG GLN PRO ALA ALA GLY ALA PRO SEQRES 7 A 258 SER PRO GLY ASP SER CYS PRO LEU ALA GLY SER ALA VAL SEQRES 8 A 258 LEU GLU GLY ARG LEU LEU LEU GLU SER LEU ASN GLY PHE SEQRES 9 A 258 ALA LEU VAL VAL SER ALA GLU GLY THR ILE PHE TYR ALA SEQRES 10 A 258 SER ALA THR ILE VAL ASP TYR LEU GLY PHE HIS GLN THR SEQRES 11 A 258 ASP VAL MET HIS GLN ASN ILE TYR ASP TYR ILE HIS VAL SEQRES 12 A 258 ASP ASP ARG GLN ASP PHE CYS ARG GLN LEU HIS TRP ALA SEQRES 13 A 258 MET ASP PRO PRO GLN VAL VAL PHE GLY GLN PRO PRO PRO SEQRES 14 A 258 LEU GLU THR GLY ASP ASP ALA ILE LEU GLY ARG LEU LEU SEQRES 15 A 258 ARG ALA GLN GLU TRP GLY THR GLY THR PRO THR GLU TYR SEQRES 16 A 258 SER ALA PHE LEU THR ARG CYS PHE ILE CYS ARG VAL ARG SEQRES 17 A 258 CYS LEU LEU ASP SER THR SER GLY PHE LEU THR MET GLN SEQRES 18 A 258 PHE GLN GLY LYS LEU LYS PHE LEU PHE GLY GLN LYS LYS SEQRES 19 A 258 LYS ALA PRO SER GLY ALA MET LEU PRO PRO ARG LEU SER SEQRES 20 A 258 LEU PHE CYS ILE ALA ALA PRO VAL LEU LEU PRO SEQRES 1 B 311 GLY PRO GLU PHE SER SER ALA ASP LYS GLU ARG LEU ALA SEQRES 2 B 311 ARG GLU ASN HIS SER GLU ILE GLU ARG ARG ARG ARG ASN SEQRES 3 B 311 LYS MET THR ALA TYR ILE THR GLU LEU SER ASP MET VAL SEQRES 4 B 311 PRO THR CYS SER ALA LEU ALA ARG LYS PRO ASP LYS LEU SEQRES 5 B 311 THR ILE LEU ARG MET ALA VAL SER HIS MET LYS SER LEU SEQRES 6 B 311 ARG GLY THR GLY ASN LYS PRO SER PHE LEU THR ASP GLN SEQRES 7 B 311 GLU LEU LYS HIS LEU ILE LEU GLU ALA ALA ASP GLY PHE SEQRES 8 B 311 LEU PHE ILE VAL SER CYS GLU THR GLY ARG VAL VAL TYR SEQRES 9 B 311 VAL SER ASP SER VAL THR PRO VAL LEU ASN GLN PRO GLN SEQRES 10 B 311 SER GLU TRP PHE GLY SER THR LEU TYR ASP GLN VAL HIS SEQRES 11 B 311 PRO ASP ASP VAL ASP LYS LEU ARG GLU GLN LEU SER THR SEQRES 12 B 311 SER GLU ASN MET GLY SER ARG ARG SER PHE ILE CYS ARG SEQRES 13 B 311 MET ARG CYS GLY ASN PRO HIS PHE VAL VAL VAL HIS CYS SEQRES 14 B 311 THR GLY TYR ILE LYS ALA TRP PRO PRO GLY SER LYS PHE SEQRES 15 B 311 CYS LEU VAL ALA ILE GLY ARG LEU GLN VAL THR SER SER SEQRES 16 B 311 PRO ASN CYS THR ASP MET SER ASN VAL CYS GLN PRO THR SEQRES 17 B 311 GLU PHE ILE SER ARG HIS ASN ILE GLU GLY ILE PHE THR SEQRES 18 B 311 PHE VAL ASP HIS ARG CYS VAL ALA THR VAL GLY TYR GLN SEQRES 19 B 311 PRO GLN GLU LEU LEU GLY LYS ASN ILE VAL GLU PHE CYS SEQRES 20 B 311 HIS PRO GLU ASP GLN GLN LEU LEU ARG ASP SER PHE GLN SEQRES 21 B 311 GLN VAL VAL LYS LEU LYS GLY GLN VAL LEU SER VAL MET SEQRES 22 B 311 PHE ARG PHE ARG SER LYS ASN ARG GLU TRP LEU TRP VAL SEQRES 23 B 311 ARG THR SER SER PHE THR PHE GLN ASN PRO TYR SER ASP SEQRES 24 B 311 GLU ILE GLU TYR ILE ILE CYS THR ASN THR ASN VAL HET GOL A 301 6 HET GOL A 302 6 HET GOL B 501 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 HOH *22(H2 O) HELIX 1 AA1 LYS A 38 LEU A 54 1 17 HELIX 2 AA2 PRO A 58 SER A 63 1 6 HELIX 3 AA3 ASP A 66 GLN A 90 1 25 HELIX 4 AA4 GLY A 116 LEU A 123 1 8 HELIX 5 AA5 THR A 142 GLY A 148 1 7 HELIX 6 AA6 HIS A 150 MET A 155 1 6 HELIX 7 AA7 ASN A 158 ILE A 163 5 6 HELIX 8 AA8 HIS A 164 ASP A 166 5 3 HELIX 9 AA9 ASP A 167 HIS A 176 1 10 HELIX 10 AB1 ASP A 197 GLN A 207 1 11 HELIX 11 AB2 TYR A 217 PHE A 220 5 4 HELIX 12 AB3 GLU B 98 VAL B 116 1 19 HELIX 13 AB4 VAL B 116 ALA B 121 1 6 HELIX 14 AB5 ASP B 127 GLY B 144 1 18 HELIX 15 AB6 THR B 160 ALA B 172 1 13 HELIX 16 AB7 SER B 192 LEU B 197 1 6 HELIX 17 AB8 LEU B 209 VAL B 213 5 5 HELIX 18 AB9 ASP B 219 LEU B 225 1 7 HELIX 19 AC1 ARG B 379 GLY B 385 1 7 HELIX 20 AC2 GLN B 387 LEU B 392 1 6 HELIX 21 AC3 ASN B 395 CYS B 400 5 6 HELIX 22 AC4 HIS B 401 GLU B 403 5 3 HELIX 23 AC5 ASP B 404 LYS B 419 1 16 SHEET 1 AA1 5 ILE A 136 ALA A 139 0 SHEET 2 AA1 5 PHE A 126 VAL A 130 -1 N VAL A 129 O TYR A 138 SHEET 3 AA1 5 LEU A 268 PRO A 276 -1 O ALA A 274 N PHE A 126 SHEET 4 AA1 5 PHE A 239 PHE A 250 -1 N GLN A 243 O ALA A 275 SHEET 5 AA1 5 THR A 222 ARG A 230 -1 N VAL A 229 O LEU A 240 SHEET 1 AA2 5 TYR B 188 VAL B 189 0 SHEET 2 AA2 5 GLY B 174 VAL B 179 -1 N ILE B 178 O TYR B 188 SHEET 3 AA2 5 LEU B 337 ARG B 342 -1 O ALA B 339 N PHE B 177 SHEET 4 AA2 5 VAL B 306 TYR B 311 -1 N HIS B 307 O ARG B 342 SHEET 5 AA2 5 PHE B 263 CYS B 265 -1 N PHE B 263 O CYS B 308 SHEET 1 AA3 5 PHE B 373 VAL B 376 0 SHEET 2 AA3 5 GLU B 362 HIS B 367 -1 N ARG B 366 O THR B 374 SHEET 3 AA3 5 GLU B 455 ASN B 463 -1 O CYS B 459 N SER B 365 SHEET 4 AA3 5 TRP B 436 GLN B 447 -1 N ARG B 440 O THR B 462 SHEET 5 AA3 5 LEU B 423 ARG B 430 -1 N PHE B 429 O LEU B 437 CISPEP 1 GLU A 115 GLY A 116 0 4.26 CISPEP 2 SER B 95 GLU B 96 0 -2.77 CISPEP 3 GLY B 146 ASN B 147 0 -2.70 CISPEP 4 GLY B 184 ARG B 185 0 -4.57 CISPEP 5 HIS B 214 PRO B 215 0 2.64 CISPEP 6 PRO B 215 ASP B 216 0 -12.09 CISPEP 7 ASP B 217 VAL B 218 0 2.48 CISPEP 8 MET B 267 ARG B 268 0 -10.14 CISPEP 9 GLY B 270 ASN B 271 0 -0.36 SITE 1 AC1 7 SER A 131 GLU A 133 THR A 135 PHE A 137 SITE 2 AC1 7 GLN A 254 LYS A 256 HOH A 406 SITE 1 AC2 4 ARG A 230 SER A 237 PHE A 239 ARG B 434 SITE 1 AC3 5 PHE A 149 ASP A 161 ARG A 230 LYS B 394 SITE 2 AC3 5 GLU B 398 CRYST1 78.362 78.362 129.784 90.00 90.00 90.00 P 41 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012761 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012761 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007705 0.00000