PDB Short entry for 5YC8 HEADER MEMBRANE PROTEIN 06-SEP-17 5YC8 TITLE CRYSTAL STRUCTURE OF RATIONALLY THERMOSTABILIZED M2 MUSCARINIC TITLE 2 ACETYLCHOLINE RECEPTOR BOUND WITH NMS (HG-DERIVATIVE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUSCARINIC ACETYLCHOLINE RECEPTOR M2,REDESIGNED APO- COMPND 3 CYTOCHROME B562,MUSCARINIC ACETYLCHOLINE RECEPTOR M2; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 10-214,UNP RESIDUES 377-466; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CHRM2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS GPCR CRYSTALLOGRAPHY, RATIONALLY THERMOSTABILIZED MUTANT, MEMBRANE KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.SUNO,S.MAEDA,S.YASUDA,K.YAMASHITA,K.HIRATA,S.HORITA,M.S.TAWARAMOTO, AUTHOR 2 H.TSUJIMOTO,T.MURATA,M.KINOSHITA,M.YAMAMOTO,B.K.KOBILKA,S.IWATA, AUTHOR 3 T.KOBAYASHI REVDAT 3 26-FEB-20 5YC8 1 REMARK REVDAT 2 28-NOV-18 5YC8 1 JRNL REVDAT 1 21-NOV-18 5YC8 0 JRNL AUTH R.SUNO,S.LEE,S.MAEDA,S.YASUDA,K.YAMASHITA,K.HIRATA,S.HORITA, JRNL AUTH 2 M.S.TAWARAMOTO,H.TSUJIMOTO,T.MURATA,M.KINOSHITA,M.YAMAMOTO, JRNL AUTH 3 B.K.KOBILKA,N.VAIDEHI,S.IWATA,T.KOBAYASHI JRNL TITL STRUCTURAL INSIGHTS INTO THE SUBTYPE-SELECTIVE ANTAGONIST JRNL TITL 2 BINDING TO THE M2MUSCARINIC RECEPTOR JRNL REF NAT. CHEM. BIOL. V. 14 1150 2018 JRNL REFN ESSN 1552-4469 JRNL PMID 30420692 JRNL DOI 10.1038/S41589-018-0152-Y REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 32414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.330 REMARK 3 FREE R VALUE TEST SET COUNT : 1728 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0399 - 5.7211 1.00 2557 135 0.2053 0.2002 REMARK 3 2 5.7211 - 4.5421 1.00 2544 153 0.2342 0.3491 REMARK 3 3 4.5421 - 3.9682 1.00 2539 149 0.2067 0.2385 REMARK 3 4 3.9682 - 3.6055 1.00 2577 139 0.2147 0.2167 REMARK 3 5 3.6055 - 3.3471 1.00 2541 149 0.2437 0.2909 REMARK 3 6 3.3471 - 3.1498 1.00 2563 138 0.2499 0.3040 REMARK 3 7 3.1498 - 2.9921 1.00 2587 152 0.2534 0.2868 REMARK 3 8 2.9921 - 2.8619 1.00 2581 140 0.2538 0.2405 REMARK 3 9 2.8619 - 2.7517 1.00 2517 143 0.2668 0.2925 REMARK 3 10 2.7517 - 2.6568 1.00 2575 140 0.2811 0.3251 REMARK 3 11 2.6568 - 2.5737 1.00 2544 141 0.2976 0.3626 REMARK 3 12 2.5737 - 2.5001 1.00 2561 149 0.3151 0.2953 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3144 REMARK 3 ANGLE : 0.491 4291 REMARK 3 CHIRALITY : 0.036 511 REMARK 3 PLANARITY : 0.004 518 REMARK 3 DIHEDRAL : 11.470 1887 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 171.2794 35.5983 533.1464 REMARK 3 T TENSOR REMARK 3 T11: 0.2299 T22: 0.1279 REMARK 3 T33: 0.3072 T12: -0.0063 REMARK 3 T13: 0.0419 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.9517 L22: 1.9012 REMARK 3 L33: 5.0678 L12: -1.3240 REMARK 3 L13: -0.0509 L23: -0.9372 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: -0.0197 S13: 0.0379 REMARK 3 S21: 0.1806 S22: 0.0876 S23: 0.0369 REMARK 3 S31: -0.0855 S32: -0.0135 S33: -0.0491 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 189.3543 31.5579 531.8703 REMARK 3 T TENSOR REMARK 3 T11: 0.1814 T22: 0.3444 REMARK 3 T33: 0.3042 T12: -0.0266 REMARK 3 T13: -0.0093 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 1.0286 L22: 3.1597 REMARK 3 L33: 2.2668 L12: -0.0534 REMARK 3 L13: -0.5354 L23: -1.5175 REMARK 3 S TENSOR REMARK 3 S11: -0.0450 S12: -0.1159 S13: -0.0089 REMARK 3 S21: 0.1431 S22: -0.0691 S23: -0.1798 REMARK 3 S31: -0.0775 S32: 0.4821 S33: 0.1247 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 187.2912 14.5998 542.8896 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.2423 REMARK 3 T33: 0.4094 T12: 0.2139 REMARK 3 T13: -0.0414 T23: -0.0464 REMARK 3 L TENSOR REMARK 3 L11: 9.2411 L22: 4.9400 REMARK 3 L33: 3.9767 L12: 0.2672 REMARK 3 L13: 2.3510 L23: 4.1478 REMARK 3 S TENSOR REMARK 3 S11: -0.5545 S12: -1.4465 S13: -0.1992 REMARK 3 S21: 0.8484 S22: -0.2629 S23: -0.3691 REMARK 3 S31: 0.5828 S32: -0.1705 S33: 0.4097 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 OR (RESID 1001 THROUGH 1018 REMARK 3 )) REMARK 3 ORIGIN FOR THE GROUP (A): 171.4089 15.6593 564.9558 REMARK 3 T TENSOR REMARK 3 T11: 1.0357 T22: 1.2940 REMARK 3 T33: 0.6365 T12: 0.1233 REMARK 3 T13: -0.0956 T23: 0.2048 REMARK 3 L TENSOR REMARK 3 L11: 2.5351 L22: 2.5431 REMARK 3 L33: 6.9746 L12: 0.3312 REMARK 3 L13: -3.1885 L23: 2.3119 REMARK 3 S TENSOR REMARK 3 S11: -0.4781 S12: 0.1843 S13: 0.6829 REMARK 3 S21: -0.0044 S22: 0.5962 S23: -0.6168 REMARK 3 S31: 0.3429 S32: 0.9740 S33: -0.1149 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1019 THROUGH 1055 ) REMARK 3 ORIGIN FOR THE GROUP (A): 170.8885 12.1420 572.0083 REMARK 3 T TENSOR REMARK 3 T11: 1.1523 T22: 1.0724 REMARK 3 T33: 0.6809 T12: 0.1194 REMARK 3 T13: 0.0159 T23: 0.1335 REMARK 3 L TENSOR REMARK 3 L11: 5.8933 L22: 3.9776 REMARK 3 L33: 5.0177 L12: -0.8819 REMARK 3 L13: 1.3870 L23: -0.7141 REMARK 3 S TENSOR REMARK 3 S11: -0.5176 S12: -1.0348 S13: -1.0520 REMARK 3 S21: -0.2423 S22: 0.9351 S23: -0.1027 REMARK 3 S31: 0.0596 S32: 0.0059 S33: -0.3913 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1056 THROUGH 1080 ) REMARK 3 ORIGIN FOR THE GROUP (A): 166.2800 13.0564 579.2525 REMARK 3 T TENSOR REMARK 3 T11: 1.2812 T22: 2.0207 REMARK 3 T33: 0.8937 T12: -0.2015 REMARK 3 T13: -0.2933 T23: 0.6049 REMARK 3 L TENSOR REMARK 3 L11: 3.5510 L22: 1.1517 REMARK 3 L33: 1.0496 L12: -0.1404 REMARK 3 L13: 0.1627 L23: 0.8748 REMARK 3 S TENSOR REMARK 3 S11: 0.1989 S12: 0.1491 S13: -0.1460 REMARK 3 S21: -0.3501 S22: 0.4398 S23: 0.3519 REMARK 3 S31: 1.2204 S32: -0.6321 S33: -0.2912 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND ((RESID 1081 THROUGH 1106) OR (RESID REMARK 3 380 THROUGH 380) ) REMARK 3 ORIGIN FOR THE GROUP (A): 163.9257 20.7694 573.7725 REMARK 3 T TENSOR REMARK 3 T11: 1.0513 T22: 1.1839 REMARK 3 T33: 0.8708 T12: -0.0653 REMARK 3 T13: -0.0272 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 2.6101 L22: 2.2436 REMARK 3 L33: 2.8567 L12: -0.0290 REMARK 3 L13: 2.6263 L23: 0.6209 REMARK 3 S TENSOR REMARK 3 S11: 0.1238 S12: -1.5875 S13: -0.2652 REMARK 3 S21: 0.5571 S22: -0.0435 S23: 0.1469 REMARK 3 S31: -0.2252 S32: -0.4471 S33: -0.1339 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 381 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): 179.2281 19.6999 536.7767 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1305 REMARK 3 T33: 0.3089 T12: 0.0157 REMARK 3 T13: -0.0222 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 4.7166 L22: 4.7700 REMARK 3 L33: 6.7199 L12: 0.1995 REMARK 3 L13: -1.1294 L23: -0.4819 REMARK 3 S TENSOR REMARK 3 S11: -0.0327 S12: -0.4238 S13: -0.0982 REMARK 3 S21: 0.2461 S22: 0.0583 S23: 0.0064 REMARK 3 S31: -0.2774 S32: -0.1065 S33: -0.0170 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 412 THROUGH 458 ) REMARK 3 ORIGIN FOR THE GROUP (A): 171.2249 28.8013 536.3583 REMARK 3 T TENSOR REMARK 3 T11: 0.2861 T22: 0.2906 REMARK 3 T33: 0.3238 T12: -0.0422 REMARK 3 T13: -0.0504 T23: 0.0640 REMARK 3 L TENSOR REMARK 3 L11: 1.9880 L22: 3.9672 REMARK 3 L33: 7.7310 L12: -0.5002 REMARK 3 L13: -2.0777 L23: 3.5509 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: -0.2813 S13: 0.0312 REMARK 3 S21: 0.3112 S22: -0.0882 S23: 0.1573 REMARK 3 S31: -0.0459 S32: -0.0488 S33: 0.1104 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YC8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1300005015. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32428 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 49.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.49 REMARK 200 R MERGE (I) : 0.48700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 4.97900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX 1.11.1_2575 REMARK 200 STARTING MODEL: 5XBB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM MES-NAOH PH 6.2-7.0, 26-32% REMARK 280 PEG300, 300~500MM AMMONIUM FLUORIDE, 1% 1,2,3-HEPTANETRIOL, REMARK 280 0.5MM NMS AND 5% DMSO, 1MM HGCL2, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.50000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ASP A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 ASP A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 ASP A 9 REMARK 465 ASN A 10 REMARK 465 SER A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 THR A 15 REMARK 465 SER A 998 REMARK 465 ARG A 999 REMARK 465 ILE A 1000 REMARK 465 PRO A 377 REMARK 465 PRO A 378 REMARK 465 PRO A 379 REMARK 465 TYR A 459 REMARK 465 LYS A 460 REMARK 465 ASN A 461 REMARK 465 ILE A 462 REMARK 465 GLY A 463 REMARK 465 ALA A 464 REMARK 465 THR A 465 REMARK 465 ARG A 466 REMARK 465 LEU A 467 REMARK 465 GLU A 468 REMARK 465 VAL A 469 REMARK 465 LEU A 470 REMARK 465 PHE A 471 REMARK 465 GLN A 472 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1057 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 130 -50.58 -135.34 REMARK 500 PHE A 195 -57.48 -129.59 REMARK 500 PRO A1046 76.80 -61.80 REMARK 500 CYS A 413 87.25 -153.59 REMARK 500 TYR A 440 -36.81 -137.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 622 DISTANCE = 6.58 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 504 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 435 O REMARK 620 2 CYS A 439 SG 79.2 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5XBA RELATED DB: PDB REMARK 900 RELATED ID: 5XB9 RELATED DB: PDB REMARK 900 RELATED ID: 5XBG RELATED DB: PDB REMARK 900 RELATED ID: 5XBB RELATED DB: PDB DBREF 5YC8 A 10 214 UNP P08172 ACM2_HUMAN 10 214 DBREF 5YC8 A 998 1106 PDB 5YC8 5YC8 998 1106 DBREF 5YC8 A 326 466 UNP P08172 ACM2_HUMAN 377 466 SEQADV 5YC8 GLY A -1 UNP P08172 EXPRESSION TAG SEQADV 5YC8 PRO A 0 UNP P08172 EXPRESSION TAG SEQADV 5YC8 MET A 1 UNP P08172 EXPRESSION TAG SEQADV 5YC8 ASP A 2 UNP P08172 EXPRESSION TAG SEQADV 5YC8 ASP A 3 UNP P08172 EXPRESSION TAG SEQADV 5YC8 SER A 4 UNP P08172 EXPRESSION TAG SEQADV 5YC8 THR A 5 UNP P08172 EXPRESSION TAG SEQADV 5YC8 ASP A 6 UNP P08172 EXPRESSION TAG SEQADV 5YC8 SER A 7 UNP P08172 EXPRESSION TAG SEQADV 5YC8 SER A 8 UNP P08172 EXPRESSION TAG SEQADV 5YC8 ASP A 9 UNP P08172 EXPRESSION TAG SEQADV 5YC8 ARG A 110 UNP P08172 SER 110 ENGINEERED MUTATION SEQADV 5YC8 LEU A 467 UNP P08172 EXPRESSION TAG SEQADV 5YC8 GLU A 468 UNP P08172 EXPRESSION TAG SEQADV 5YC8 VAL A 469 UNP P08172 EXPRESSION TAG SEQADV 5YC8 LEU A 470 UNP P08172 EXPRESSION TAG SEQADV 5YC8 PHE A 471 UNP P08172 EXPRESSION TAG SEQADV 5YC8 GLN A 472 UNP P08172 EXPRESSION TAG SEQRES 1 A 421 GLY PRO MET ASP ASP SER THR ASP SER SER ASP ASN SER SEQRES 2 A 421 LEU ALA LEU THR SER PRO TYR LYS THR PHE GLU VAL VAL SEQRES 3 A 421 PHE ILE VAL LEU VAL ALA GLY SER LEU SER LEU VAL THR SEQRES 4 A 421 ILE ILE GLY ASN ILE LEU VAL MET VAL SER ILE LYS VAL SEQRES 5 A 421 ASN ARG HIS LEU GLN THR VAL ASN ASN TYR PHE LEU PHE SEQRES 6 A 421 SER LEU ALA CYS ALA ASP LEU ILE ILE GLY VAL PHE SER SEQRES 7 A 421 MET ASN LEU TYR THR LEU TYR THR VAL ILE GLY TYR TRP SEQRES 8 A 421 PRO LEU GLY PRO VAL VAL CYS ASP LEU TRP LEU ALA LEU SEQRES 9 A 421 ASP TYR VAL VAL SER ASN ALA ARG VAL MET ASN LEU LEU SEQRES 10 A 421 ILE ILE SER PHE ASP ARG TYR PHE CYS VAL THR LYS PRO SEQRES 11 A 421 LEU THR TYR PRO VAL LYS ARG THR THR LYS MET ALA GLY SEQRES 12 A 421 MET MET ILE ALA ALA ALA TRP VAL LEU SER PHE ILE LEU SEQRES 13 A 421 TRP ALA PRO ALA ILE LEU PHE TRP GLN PHE ILE VAL GLY SEQRES 14 A 421 VAL ARG THR VAL GLU ASP GLY GLU CYS TYR ILE GLN PHE SEQRES 15 A 421 PHE SER ASN ALA ALA VAL THR PHE GLY THR ALA ILE ALA SEQRES 16 A 421 ALA PHE TYR LEU PRO VAL ILE ILE MET THR VAL LEU TYR SEQRES 17 A 421 TRP HIS ILE SER ARG ALA SER LYS SER ARG ILE ALA ASP SEQRES 18 A 421 LEU GLU ASP ASN TRP GLU THR LEU ASN ASP ASN LEU LYS SEQRES 19 A 421 VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL LYS ASP SEQRES 20 A 421 ALA LEU THR LYS MET ARG ALA ALA ALA LEU ASP ALA GLN SEQRES 21 A 421 LYS ALA THR PRO PRO LYS LEU GLU ASP LYS SER PRO ASP SEQRES 22 A 421 SER PRO GLU MET LYS ASP PHE ARG HIS GLY PHE ASP ILE SEQRES 23 A 421 LEU VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN SEQRES 24 A 421 GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN SEQRES 25 A 421 LEU LYS THR THR ARG ASN ALA TYR ILE GLN LYS TYR LEU SEQRES 26 A 421 PRO PRO PRO SER ARG GLU LYS LYS VAL THR ARG THR ILE SEQRES 27 A 421 LEU ALA ILE LEU LEU ALA PHE ILE ILE THR TRP ALA PRO SEQRES 28 A 421 TYR ASN VAL MET VAL LEU ILE ASN THR PHE CYS ALA PRO SEQRES 29 A 421 CYS ILE PRO ASN THR VAL TRP THR ILE GLY TYR TRP LEU SEQRES 30 A 421 CYS TYR ILE ASN SER THR ILE ASN PRO ALA CYS TYR ALA SEQRES 31 A 421 LEU CYS ASN ALA THR PHE LYS LYS THR PHE LYS HIS LEU SEQRES 32 A 421 LEU MET CYS HIS TYR LYS ASN ILE GLY ALA THR ARG LEU SEQRES 33 A 421 GLU VAL LEU PHE GLN HET 3C0 A 501 23 HET HG A 502 1 HET HG A 503 1 HET HG A 504 1 HETNAM 3C0 N-METHYL SCOPOLAMINE HETNAM HG MERCURY (II) ION HETSYN 3C0 (1R,2R,4S,5S,7S)-7-{[(2S)-3-HYDROXY-2- HETSYN 2 3C0 PHENYLPROPANOYL]OXY}-9,9-DIMETHYL-3-OXA-9- HETSYN 3 3C0 AZONIATRICYCLO[3.3.1.0~2,4~]NONANE FORMUL 2 3C0 C18 H24 N O4 1+ FORMUL 3 HG 3(HG 2+) FORMUL 6 HOH *22(H2 O) HELIX 1 AA1 SER A 16 ASN A 51 1 36 HELIX 2 AA2 ARG A 52 GLN A 55 5 4 HELIX 3 AA3 THR A 56 PHE A 75 1 20 HELIX 4 AA4 PHE A 75 GLY A 87 1 13 HELIX 5 AA5 GLY A 92 LYS A 127 1 36 HELIX 6 AA6 TYR A 131 ARG A 135 5 5 HELIX 7 AA7 THR A 136 GLY A 167 1 32 HELIX 8 AA8 ILE A 178 SER A 182 5 5 HELIX 9 AA9 ASN A 183 PHE A 195 1 13 HELIX 10 AB1 PHE A 195 LYS A 214 1 20 HELIX 11 AB2 ASP A 1002 LYS A 1019 1 18 HELIX 12 AB3 ALA A 1023 LYS A 1042 1 20 HELIX 13 AB4 SER A 1055 GLY A 1082 1 28 HELIX 14 AB5 LYS A 1083 TYR A 1101 1 19 HELIX 15 AB6 ARG A 381 THR A 411 1 31 HELIX 16 AB7 PHE A 412 ILE A 417 5 6 HELIX 17 AB8 PRO A 418 ASN A 436 1 19 HELIX 18 AB9 PRO A 437 CYS A 443 5 7 HELIX 19 AC1 ASN A 444 MET A 456 1 13 SSBOND 1 CYS A 96 CYS A 176 1555 1555 2.03 SSBOND 2 CYS A 413 CYS A 416 1555 1555 2.03 LINK SG CYS A 67 HG HG A 502 1555 1555 2.64 LINK SG CYS A 67 HG HG A 503 1555 1555 2.68 LINK O ILE A 435 HG HG A 504 1555 1555 2.98 LINK SG CYS A 439 HG HG A 504 1555 1555 2.63 CRYST1 46.520 59.000 89.220 90.00 98.89 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021496 0.000000 0.003364 0.00000 SCALE2 0.000000 0.016949 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011345 0.00000