PDB Short entry for 5YFG HEADER PROTEIN TRANSPORT 21-SEP-17 5YFG TITLE SOLUTION STRUCTURE OF HUMAN MOG1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAN GUANINE NUCLEOTIDE RELEASE FACTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RANGNRF,RAN-BINDING PROTEIN MOG1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RANGRF, MOG1, RANGNRF, HSPC165, HSPC236, MDS5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B+ KEYWDS CENTRAL BETA SHEET, ALTERNATIVE SPLICING, CYTOPLASM, GUANINE- KEYWDS 2 NUCLEOTIDE RELEASING FACTOR, NUCLEUS, PROTEIN TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Q.HU,Y.LIU,X.BAO,H.LIU REVDAT 3 14-JUN-23 5YFG 1 REMARK REVDAT 2 11-APR-18 5YFG 1 JRNL REVDAT 1 01-NOV-17 5YFG 0 JRNL AUTH X.BAO,H.LIU,X.LIU,K.RUAN,Y.ZHANG,Z.ZHANG,Q.HU,Y.LIU,S.AKRAM, JRNL AUTH 2 J.ZHANG,Q.GONG,W.WANG,X.YUAN,J.LI,L.ZHAO,Z.DOU,R.TIAN,X.YAO, JRNL AUTH 3 J.WU,Y.SHI JRNL TITL MITOSIS-SPECIFIC ACETYLATION TUNES RAN EFFECTOR BINDING FOR JRNL TITL 2 CHROMOSOME SEGREGATION JRNL REF J MOL CELL BIOL V. 10 18 2018 JRNL REFN ESSN 1759-4685 JRNL PMID 29040603 JRNL DOI 10.1093/JMCB/MJX045 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, PROCHECK REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES, READ (CNS), REMARK 3 LASKOWSKI, MACARTHUR, SMITH, JONES, HUTCHINSON, REMARK 3 MORRIS, MOSS AND THORNTON (PROCHECK) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YFG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1300005155. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 0.9 MM [U-99% 15N] MOG1, 90% REMARK 210 H2O/10% D2O; 0.9 MM [U-13C] MOG1, REMARK 210 90% H2O/10% D2O; 0.9 MM [U-99% REMARK 210 13C; U-99% 15N] MOG1, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 CBCANH; 3D HNCA; 3D HN(CO)CA; 3D REMARK 210 HCCH-TOCSY; 3D HCCH-COSY; 3D REMARK 210 C(CO)NH-TOCSY; 3D HC(CO)NH-TOCSY; REMARK 210 3D HBHA(CO)NH; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TALOS, MOLMOL, NMRDRAW, NMRPIPE, REMARK 210 SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING, DISTANCE REMARK 210 GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 VAL A 187 REMARK 465 GLU A 188 REMARK 465 HIS A 189 REMARK 465 HIS A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 4 129.43 -170.11 REMARK 500 1 LEU A 18 96.39 179.14 REMARK 500 1 PRO A 19 -176.49 -56.01 REMARK 500 1 ALA A 56 -83.99 61.57 REMARK 500 1 HIS A 57 36.89 -172.00 REMARK 500 1 ALA A 77 99.54 61.35 REMARK 500 1 SER A 84 177.28 175.98 REMARK 500 1 TYR A 134 32.43 -165.29 REMARK 500 1 GLN A 135 67.53 60.14 REMARK 500 1 ASP A 148 43.72 -168.56 REMARK 500 1 SER A 151 -73.45 68.58 REMARK 500 1 SER A 159 159.48 63.16 REMARK 500 1 SER A 164 -161.34 -122.72 REMARK 500 1 ILE A 182 47.33 -108.34 REMARK 500 2 THR A 4 63.11 -100.50 REMARK 500 2 LEU A 54 99.14 -57.57 REMARK 500 2 ALA A 56 104.03 -44.05 REMARK 500 2 GLN A 75 63.94 -173.20 REMARK 500 2 ALA A 77 80.78 56.65 REMARK 500 2 ARG A 78 -75.87 -88.42 REMARK 500 2 SER A 84 -178.90 176.79 REMARK 500 2 GLU A 101 -179.44 -175.74 REMARK 500 2 ASN A 115 -45.83 -174.23 REMARK 500 2 GLN A 117 -50.83 -148.03 REMARK 500 2 TYR A 134 39.07 -172.54 REMARK 500 2 GLN A 135 73.51 56.32 REMARK 500 2 ASP A 148 109.88 69.69 REMARK 500 2 ARG A 150 75.09 60.33 REMARK 500 2 LEU A 158 83.19 59.79 REMARK 500 2 SER A 164 -154.62 -122.34 REMARK 500 3 THR A 4 114.16 -170.04 REMARK 500 3 VAL A 42 -65.34 -144.64 REMARK 500 3 ASP A 44 49.75 74.92 REMARK 500 3 ALA A 56 -81.57 62.78 REMARK 500 3 HIS A 57 34.03 -165.45 REMARK 500 3 GLN A 75 37.89 -158.59 REMARK 500 3 ALA A 77 81.75 55.48 REMARK 500 3 ARG A 96 -73.50 64.99 REMARK 500 3 GLN A 116 176.94 66.53 REMARK 500 3 TYR A 134 37.26 -171.50 REMARK 500 3 GLN A 135 73.32 58.64 REMARK 500 3 ARG A 150 32.19 -95.28 REMARK 500 3 SER A 152 -42.74 -152.13 REMARK 500 3 GLU A 156 102.65 70.50 REMARK 500 3 SER A 164 -157.38 -108.94 REMARK 500 3 HIS A 178 -62.73 -106.30 REMARK 500 3 ILE A 182 31.19 -92.70 REMARK 500 4 THR A 4 110.35 -167.20 REMARK 500 4 ASP A 24 99.74 -64.70 REMARK 500 4 PRO A 32 172.78 -57.49 REMARK 500 REMARK 500 THIS ENTRY HAS 350 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36117 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF HUMAN MOG1 DBREF 5YFG A 1 186 UNP Q9HD47 MOG1_HUMAN 1 186 SEQADV 5YFG VAL A 187 UNP Q9HD47 EXPRESSION TAG SEQADV 5YFG GLU A 188 UNP Q9HD47 EXPRESSION TAG SEQADV 5YFG HIS A 189 UNP Q9HD47 EXPRESSION TAG SEQADV 5YFG HIS A 190 UNP Q9HD47 EXPRESSION TAG SEQADV 5YFG HIS A 191 UNP Q9HD47 EXPRESSION TAG SEQADV 5YFG HIS A 192 UNP Q9HD47 EXPRESSION TAG SEQADV 5YFG HIS A 193 UNP Q9HD47 EXPRESSION TAG SEQADV 5YFG HIS A 194 UNP Q9HD47 EXPRESSION TAG SEQRES 1 A 194 MET GLU PRO THR ARG ASP CYS PRO LEU PHE GLY GLY ALA SEQRES 2 A 194 PHE SER ALA ILE LEU PRO MET GLY ALA ILE ASP VAL SER SEQRES 3 A 194 ASP LEU ARG PRO VAL PRO ASP ASN GLN GLU VAL PHE CYS SEQRES 4 A 194 HIS PRO VAL THR ASP GLN SER LEU ILE VAL GLU LEU LEU SEQRES 5 A 194 GLU LEU GLN ALA HIS VAL ARG GLY GLU ALA ALA ALA ARG SEQRES 6 A 194 TYR HIS PHE GLU ASP VAL GLY GLY VAL GLN GLY ALA ARG SEQRES 7 A 194 ALA VAL HIS VAL GLU SER VAL GLN PRO LEU SER LEU GLU SEQRES 8 A 194 ASN LEU ALA LEU ARG GLY ARG CYS GLN GLU ALA TRP VAL SEQRES 9 A 194 LEU SER GLY LYS GLN GLN ILE ALA LYS GLU ASN GLN GLN SEQRES 10 A 194 VAL ALA LYS ASP VAL THR LEU HIS GLN ALA LEU LEU ARG SEQRES 11 A 194 LEU PRO GLN TYR GLN THR ASP LEU LEU LEU THR PHE ASN SEQRES 12 A 194 GLN PRO PRO PRO ASP ASN ARG SER SER LEU GLY PRO GLU SEQRES 13 A 194 ASN LEU SER PRO ALA PRO TRP SER LEU GLY ASP PHE GLU SEQRES 14 A 194 GLN LEU VAL THR SER LEU THR LEU HIS ASP PRO ASN ILE SEQRES 15 A 194 PHE GLY PRO GLN VAL GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 SER A 26 LEU A 28 5 3 HELIX 2 AA2 GLY A 60 GLY A 72 1 13 HELIX 3 AA3 SER A 89 LEU A 93 5 5 HELIX 4 AA4 SER A 164 THR A 173 1 10 HELIX 5 AA5 SER A 174 THR A 176 5 3 SHEET 1 AA1 2 ASP A 6 PRO A 8 0 SHEET 2 AA1 2 SER A 15 ILE A 17 -1 O ALA A 16 N CYS A 7 SHEET 1 AA2 7 ILE A 23 ASP A 24 0 SHEET 2 AA2 7 GLN A 35 HIS A 40 -1 O CYS A 39 N ILE A 23 SHEET 3 AA2 7 GLN A 45 GLU A 50 -1 O LEU A 47 N PHE A 38 SHEET 4 AA2 7 THR A 136 GLN A 144 -1 O LEU A 139 N GLU A 50 SHEET 5 AA2 7 THR A 123 LEU A 131 -1 N LEU A 131 O THR A 136 SHEET 6 AA2 7 GLU A 101 LYS A 108 -1 N GLY A 107 O LEU A 124 SHEET 7 AA2 7 HIS A 81 PRO A 87 -1 N HIS A 81 O LYS A 108 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000