PDB Short entry for 5YUX HEADER DNA BINDING PROTEIN/DNA 23-NOV-17 5YUX TITLE DNA POLYMERASE IV - DNA TERNARY COMPLEX 8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: F, A; COMPND 4 FRAGMENT: UNP RESIDUES 2-351; COMPND 5 SYNONYM: POL IV,TRANSLESION SYNTHESIS POLYMERASE IV,TSL POLYMERASE COMPND 6 IV; COMPND 7 EC: 2.7.7.7; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DTN1; COMPND 11 CHAIN: G, B, C; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DTN2; COMPND 15 CHAIN: H; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DINB, DINP, B0231, JW0221; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 11 ORGANISM_TAXID: 83333; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 15 ORGANISM_TAXID: 83333 KEYWDS DNA POLYMERASE, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.KOTTUR,D.T.NAIR REVDAT 3 22-NOV-23 5YUX 1 LINK REVDAT 2 26-DEC-18 5YUX 1 REMARK REVDAT 1 19-DEC-18 5YUX 0 JRNL AUTH J.KOTTUR,D.T.NAIR JRNL TITL PYROPHOSPHATE HYDROLYSIS IS AN INTRINSIC AND CRITICAL STEP JRNL TITL 2 OF THE DNA SYNTHESIS REACTION JRNL REF NUCLEIC ACIDS RES. V. 46 5875 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 29850882 JRNL DOI 10.1093/NAR/GKY402 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.080 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 67598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 6667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6487 - 6.3329 0.94 3916 241 0.1492 0.1664 REMARK 3 2 6.3329 - 5.0288 1.00 4214 228 0.1616 0.1934 REMARK 3 3 5.0288 - 4.3938 1.00 4167 243 0.1467 0.2148 REMARK 3 4 4.3938 - 3.9923 1.00 4257 169 0.1405 0.2226 REMARK 3 5 3.9923 - 3.7063 1.00 4162 269 0.1557 0.2188 REMARK 3 6 3.7063 - 3.4879 1.00 4205 208 0.1662 0.2212 REMARK 3 7 3.4879 - 3.3133 1.00 4171 213 0.1663 0.1827 REMARK 3 8 3.3133 - 3.1691 1.00 4224 185 0.1639 0.2239 REMARK 3 9 3.1691 - 3.0471 0.99 4186 230 0.1811 0.2438 REMARK 3 10 3.0471 - 2.9420 0.99 4201 208 0.1968 0.2619 REMARK 3 11 2.9420 - 2.8500 1.00 4200 198 0.2010 0.2865 REMARK 3 12 2.8500 - 2.7686 0.99 4187 254 0.2056 0.2553 REMARK 3 13 2.7686 - 2.6957 0.99 4078 226 0.2019 0.2401 REMARK 3 14 2.6957 - 2.6299 0.99 4208 231 0.2152 0.3063 REMARK 3 15 2.6299 - 2.5702 0.98 4170 232 0.2237 0.2911 REMARK 3 16 2.5702 - 2.5155 0.99 4103 215 0.2239 0.2978 REMARK 3 17 2.5155 - 2.4652 0.98 4116 220 0.2234 0.2905 REMARK 3 18 2.4652 - 2.4186 0.99 4232 218 0.2234 0.2622 REMARK 3 19 2.4186 - 2.3754 0.99 4097 244 0.2342 0.3161 REMARK 3 20 2.3754 - 2.3352 0.97 4060 246 0.2313 0.2721 REMARK 3 21 2.3352 - 2.2975 0.99 4090 220 0.2364 0.3115 REMARK 3 22 2.2975 - 2.2622 0.97 4127 190 0.2400 0.2486 REMARK 3 23 2.2622 - 2.2289 0.98 4145 217 0.2573 0.2728 REMARK 3 24 2.2289 - 2.1975 0.99 4076 204 0.2540 0.3048 REMARK 3 25 2.1975 - 2.1678 0.96 4042 258 0.2462 0.2880 REMARK 3 26 2.1678 - 2.1397 0.98 4108 233 0.2541 0.2830 REMARK 3 27 2.1397 - 2.1129 0.98 4039 248 0.2664 0.3065 REMARK 3 28 2.1129 - 2.0875 0.95 4119 190 0.2721 0.3033 REMARK 3 29 2.0875 - 2.0632 0.97 4020 208 0.3009 0.3215 REMARK 3 30 2.0632 - 2.0400 0.97 4060 221 0.3155 0.3592 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7123 REMARK 3 ANGLE : 1.025 9929 REMARK 3 CHIRALITY : 0.056 1113 REMARK 3 PLANARITY : 0.006 1034 REMARK 3 DIHEDRAL : 20.971 4068 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6232 -13.9645 -69.9250 REMARK 3 T TENSOR REMARK 3 T11: 0.2350 T22: 0.2210 REMARK 3 T33: 0.4880 T12: -0.0250 REMARK 3 T13: 0.0953 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 2.1091 L22: 2.5108 REMARK 3 L33: 3.2391 L12: -0.6261 REMARK 3 L13: 1.6100 L23: -0.3388 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.2426 S13: -0.0621 REMARK 3 S21: -0.3406 S22: -0.0032 S23: -0.7782 REMARK 3 S31: 0.1252 S32: 0.2428 S33: 0.0066 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7042 3.3131 -69.1620 REMARK 3 T TENSOR REMARK 3 T11: 0.3112 T22: 0.2432 REMARK 3 T33: 0.5793 T12: 0.0099 REMARK 3 T13: -0.1325 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 1.3972 L22: 4.3686 REMARK 3 L33: 1.8331 L12: -0.4433 REMARK 3 L13: 0.5488 L23: 0.7108 REMARK 3 S TENSOR REMARK 3 S11: -0.1186 S12: 0.1804 S13: 0.7558 REMARK 3 S21: -0.3232 S22: -0.1963 S23: 0.1916 REMARK 3 S31: -0.4122 S32: -0.1334 S33: 0.2673 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2034 -14.6549 -44.3655 REMARK 3 T TENSOR REMARK 3 T11: 0.3338 T22: 0.2380 REMARK 3 T33: 0.5133 T12: 0.0439 REMARK 3 T13: -0.1296 T23: -0.0828 REMARK 3 L TENSOR REMARK 3 L11: 3.8230 L22: 2.6694 REMARK 3 L33: 2.4770 L12: -0.8095 REMARK 3 L13: -0.3401 L23: -0.6375 REMARK 3 S TENSOR REMARK 3 S11: -0.2761 S12: -0.3833 S13: 0.2586 REMARK 3 S21: 0.5706 S22: 0.0718 S23: -0.3514 REMARK 3 S31: -0.1217 S32: -0.0257 S33: 0.1819 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.7567 -18.9294 -63.9925 REMARK 3 T TENSOR REMARK 3 T11: 0.1540 T22: 0.4483 REMARK 3 T33: 0.3077 T12: -0.0571 REMARK 3 T13: 0.0255 T23: -0.1507 REMARK 3 L TENSOR REMARK 3 L11: 3.6175 L22: 3.0307 REMARK 3 L33: 2.4542 L12: 0.2178 REMARK 3 L13: 0.9858 L23: 0.1228 REMARK 3 S TENSOR REMARK 3 S11: -0.1725 S12: -0.4902 S13: 0.5844 REMARK 3 S21: -0.2022 S22: 0.1193 S23: 0.2194 REMARK 3 S31: 0.2063 S32: -0.5394 S33: 0.0268 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 10 OR RESID 76 REMARK 3 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9071 -8.1895 3.2892 REMARK 3 T TENSOR REMARK 3 T11: 0.6260 T22: 0.4082 REMARK 3 T33: 0.2975 T12: 0.0786 REMARK 3 T13: -0.1077 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 3.3867 L22: 1.7098 REMARK 3 L33: 1.7817 L12: 0.3689 REMARK 3 L13: -0.0952 L23: -0.0132 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: -0.2773 S13: -0.2389 REMARK 3 S21: 0.4696 S22: 0.0070 S23: -0.3143 REMARK 3 S31: 0.3249 S32: 0.3639 S33: -0.0399 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5596 8.6874 -14.5598 REMARK 3 T TENSOR REMARK 3 T11: 0.6291 T22: 0.3750 REMARK 3 T33: 0.2975 T12: -0.0655 REMARK 3 T13: 0.0248 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 4.4075 L22: 4.8541 REMARK 3 L33: 2.6541 L12: -0.6526 REMARK 3 L13: -0.4559 L23: -0.7605 REMARK 3 S TENSOR REMARK 3 S11: 0.1979 S12: -0.0450 S13: 0.3764 REMARK 3 S21: 0.1348 S22: -0.0824 S23: -0.3017 REMARK 3 S31: -0.7786 S32: 0.5649 S33: -0.1195 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.6141 -8.8857 -4.5093 REMARK 3 T TENSOR REMARK 3 T11: 0.6059 T22: 0.3928 REMARK 3 T33: 0.2405 T12: -0.0085 REMARK 3 T13: 0.0347 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 2.8289 L22: 3.7945 REMARK 3 L33: 1.5391 L12: 0.0621 REMARK 3 L13: 0.5698 L23: -1.0234 REMARK 3 S TENSOR REMARK 3 S11: 0.0837 S12: 0.0275 S13: 0.0378 REMARK 3 S21: -0.1216 S22: 0.0501 S23: 0.3968 REMARK 3 S31: 0.1863 S32: -0.3712 S33: -0.1475 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 241 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6957 -14.8661 -32.3950 REMARK 3 T TENSOR REMARK 3 T11: 0.4135 T22: 0.4022 REMARK 3 T33: 0.2319 T12: 0.1268 REMARK 3 T13: 0.0233 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 2.2824 L22: 4.0636 REMARK 3 L33: 4.8171 L12: -0.8611 REMARK 3 L13: -0.0982 L23: -0.1148 REMARK 3 S TENSOR REMARK 3 S11: -0.0865 S12: 0.0090 S13: -0.2560 REMARK 3 S21: 0.2056 S22: -0.1097 S23: -0.1587 REMARK 3 S31: 0.4934 S32: 0.4711 S33: 0.1837 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 860 THROUGH 874 ) OR CHAIN 'G' REMARK 3 AND (RESID 838 THROUGH 854) OR CHAIN 'F' AND (RESID REMARK 3 900 THROUGH 903) REMARK 3 ORIGIN FOR THE GROUP (A): -17.8533 -23.0023 -53.5773 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.3273 REMARK 3 T33: 0.3155 T12: -0.0120 REMARK 3 T13: 0.0683 T23: -0.0416 REMARK 3 L TENSOR REMARK 3 L11: 4.5931 L22: 3.1804 REMARK 3 L33: 1.9255 L12: 1.1874 REMARK 3 L13: -0.0918 L23: -1.6063 REMARK 3 S TENSOR REMARK 3 S11: -0.1006 S12: -0.6425 S13: -0.4185 REMARK 3 S21: 0.0896 S22: -0.1674 S23: -0.1924 REMARK 3 S31: 0.1089 S32: -0.2450 S33: 0.1799 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 838 THROUGH 854 ) OR CHAIN 'C' REMARK 3 AND (RESID 857 THROUGH 874) OR CHAIN 'A' AND (RESID REMARK 3 900 THROUGH 903) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8538 -19.3916 -23.0758 REMARK 3 T TENSOR REMARK 3 T11: 0.6088 T22: 0.4610 REMARK 3 T33: 0.3159 T12: 0.0151 REMARK 3 T13: 0.0028 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 1.8306 L22: 4.9797 REMARK 3 L33: 0.7899 L12: 2.9355 REMARK 3 L13: 1.1369 L23: 2.1085 REMARK 3 S TENSOR REMARK 3 S11: 0.1651 S12: -0.0772 S13: 0.0279 REMARK 3 S21: 0.0772 S22: -0.2264 S23: 0.1629 REMARK 3 S31: 0.1154 S32: -0.2713 S33: 0.0470 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YUX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1300005347. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68221 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 54.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IR1 REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% MPD , PH 5.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.54500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN F 342 REMARK 465 MET F 343 REMARK 465 GLU F 344 REMARK 465 ARG F 345 REMARK 465 GLN F 346 REMARK 465 LEU F 347 REMARK 465 VAL F 348 REMARK 465 LEU F 349 REMARK 465 GLY F 350 REMARK 465 LEU F 351 REMARK 465 GLN A 342 REMARK 465 MET A 343 REMARK 465 GLU A 344 REMARK 465 ARG A 345 REMARK 465 GLN A 346 REMARK 465 LEU A 347 REMARK 465 VAL A 348 REMARK 465 LEU A 349 REMARK 465 GLY A 350 REMARK 465 LEU A 351 REMARK 465 DT G 837 REMARK 465 DT G 855 REMARK 465 DT H 857 REMARK 465 DC H 858 REMARK 465 DT H 859 REMARK 465 DT B 837 REMARK 465 DT B 855 REMARK 465 DT C 856 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS F 64 CG CD CE NZ REMARK 470 LYS F 205 CG CD CE NZ REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 DG H 860 P OP1 OP2 REMARK 470 DC C 857 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 931 O HOH C 1036 2.10 REMARK 500 O HOH A 1134 O HOH C 1036 2.10 REMARK 500 OP1 DC G 853 O HOH G 902 2.15 REMARK 500 O6 DG C 862 O HOH C 1001 2.15 REMARK 500 O HOH A 1055 O HOH B 925 2.17 REMARK 500 O HOH F 1007 O HOH F 1197 2.18 REMARK 500 OP1 DT H 863 O HOH H 1001 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1144 O HOH A 1180 2455 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT G 839 O3' DT G 839 C3' -0.047 REMARK 500 DC H 873 O3' DC H 873 C3' 0.097 REMARK 500 DA C 859 O3' DA C 859 C3' -0.057 REMARK 500 DA C 867 O3' DA C 867 C3' -0.036 REMARK 500 DC C 873 O3' DC C 873 C3' 0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG G 842 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC G 853 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG H 869 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC C 873 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS F 11 51.29 38.16 REMARK 500 ALA F 56 -1.43 77.00 REMARK 500 SER F 101 -179.84 179.17 REMARK 500 LEU F 307 126.57 -39.05 REMARK 500 GLU A 133 -53.59 69.08 REMARK 500 PHE A 215 -34.32 56.68 REMARK 500 ASP A 230 91.72 -164.87 REMARK 500 LYS A 278 83.87 -155.89 REMARK 500 LEU A 281 19.15 59.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH F1219 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH F1220 DISTANCE = 6.52 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 ASP F 8 OD1 24.9 REMARK 620 3 MET F 9 O 77.6 91.6 REMARK 620 4 ASP F 103 OD2 94.5 74.9 86.2 REMARK 620 5 TTP F 900 O1A 102.1 86.5 175.3 89.1 REMARK 620 6 TTP F 900 O1B 163.7 171.1 92.1 97.4 89.2 REMARK 620 7 TTP F 900 O3G 84.3 103.6 95.0 178.1 89.7 84.1 REMARK 620 8 DPO F 903 O1 163.2 167.7 87.9 92.8 93.1 6.0 88.7 REMARK 620 9 DPO F 903 O7 93.1 114.7 86.7 168.3 98.1 73.6 13.7 77.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 ASP F 8 OD2 42.4 REMARK 620 3 ASP F 103 OD1 93.1 134.0 REMARK 620 4 GLU F 104 OE1 106.3 77.1 115.9 REMARK 620 5 TTP F 900 O1A 88.8 91.5 100.1 139.5 REMARK 620 6 DC H 873 O3' 138.9 122.5 98.1 103.9 50.4 REMARK 620 7 DC H 873 O3' 154.7 130.6 94.3 92.0 66.1 15.8 REMARK 620 8 DT H 874 OP1 90.9 92.9 100.1 138.5 2.1 48.3 64.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 MET A 9 O 91.1 REMARK 620 3 ASP A 103 OD2 81.1 83.0 REMARK 620 4 TTP A 900 O2A 90.1 170.4 87.8 REMARK 620 5 TTP A 900 O2B 171.1 86.3 90.1 91.1 REMARK 620 6 TTP A 900 O2G 102.9 98.7 175.5 90.3 85.9 REMARK 620 7 DPO A 903 O2 174.1 92.0 94.3 86.0 6.7 81.5 REMARK 620 8 DPO A 903 O7 110.9 94.3 167.8 94.2 77.9 8.9 73.9 REMARK 620 9 DT C 874 OP1 83.3 171.1 89.2 7.2 98.2 89.4 93.0 94.3 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 103 OD1 95.8 REMARK 620 3 GLU A 104 OE2 117.8 117.4 REMARK 620 4 TTP A 900 O2A 85.9 97.7 133.1 REMARK 620 5 DC C 873 O3' 145.7 93.4 86.3 60.1 REMARK 620 6 DT C 874 OP1 82.4 101.9 131.7 5.3 63.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DPO F 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DPO A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide TTP A 900 and DC REMARK 800 C 873 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide TTP F 900 and DC REMARK 800 H 873 DBREF 5YUX F 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YUX A 2 351 UNP Q47155 DPO4_ECOLI 2 351 DBREF 5YUX G 837 855 PDB 5YUX 5YUX 837 855 DBREF 5YUX H 857 874 PDB 5YUX 5YUX 857 874 DBREF 5YUX B 837 855 PDB 5YUX 5YUX 837 855 DBREF 5YUX C 856 874 PDB 5YUX 5YUX 856 874 SEQADV 5YUX GLY F 0 UNP Q47155 EXPRESSION TAG SEQADV 5YUX SER F 1 UNP Q47155 EXPRESSION TAG SEQADV 5YUX GLY A 0 UNP Q47155 EXPRESSION TAG SEQADV 5YUX SER A 1 UNP Q47155 EXPRESSION TAG SEQRES 1 F 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 F 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 F 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 F 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 F 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 F 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 F 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 F 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 F 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 F 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 F 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 F 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 F 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 F 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 F 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 F 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 F 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 F 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 F 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 F 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 F 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 F 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 F 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 F 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 F 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 F 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 F 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 F 352 LEU SEQRES 1 A 352 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 A 352 PHE ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 A 352 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 A 352 GLY VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 A 352 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 A 352 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 A 352 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 A 352 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 A 352 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 A 352 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 A 352 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 A 352 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 A 352 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 A 352 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 A 352 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 A 352 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 A 352 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 A 352 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 A 352 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 A 352 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 A 352 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 A 352 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 A 352 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 A 352 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 A 352 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 A 352 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 A 352 LEU LEU ASP PRO GLN MET GLU ARG GLN LEU VAL LEU GLY SEQRES 28 A 352 LEU SEQRES 1 G 19 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 G 19 DG DA DC DC DC DT SEQRES 1 H 18 DT DC DT DG DG DG DT DC DC DT DA DG DG SEQRES 2 H 18 DA DC DC DC DT SEQRES 1 B 19 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 B 19 DG DA DC DC DC DT SEQRES 1 C 19 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 C 19 DG DA DC DC DC DT HET TTP F 900 29 HET MG F 901 1 HET MG F 902 1 HET DPO F 903 9 HET TTP A 900 29 HET MG A 901 1 HET MG A 902 1 HET DPO A 903 9 HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM DPO DIPHOSPHATE FORMUL 7 TTP 2(C10 H17 N2 O14 P3) FORMUL 8 MG 4(MG 2+) FORMUL 10 DPO 2(O7 P2 4-) FORMUL 15 HOH *540(H2 O) HELIX 1 AA1 CYS F 11 ASN F 21 1 11 HELIX 2 AA2 PRO F 22 ARG F 25 5 4 HELIX 3 AA3 ASN F 45 LYS F 50 1 6 HELIX 4 AA4 PRO F 58 CYS F 66 1 9 HELIX 5 AA5 ARG F 75 ARG F 92 1 18 HELIX 6 AA6 VAL F 113 GLY F 117 5 5 HELIX 7 AA7 SER F 118 GLN F 135 1 18 HELIX 8 AA8 VAL F 145 ASN F 156 1 12 HELIX 9 AA9 THR F 165 ALA F 167 5 3 HELIX 10 AB1 GLU F 168 THR F 175 1 8 HELIX 11 AB2 PRO F 177 ILE F 181 5 5 HELIX 12 AB3 GLY F 185 MET F 195 1 11 HELIX 13 AB4 THR F 199 LYS F 205 1 7 HELIX 14 AB5 ASP F 207 GLY F 216 1 10 HELIX 15 AB6 GLY F 216 SER F 226 1 11 HELIX 16 AB7 HIS F 255 LYS F 278 1 24 HELIX 17 AB8 ASN F 308 ARG F 324 1 17 HELIX 18 AB9 CYS A 11 ASN A 21 1 11 HELIX 19 AC1 PRO A 22 ARG A 25 5 4 HELIX 20 AC2 ASN A 45 LYS A 50 1 6 HELIX 21 AC3 PRO A 58 CYS A 66 1 9 HELIX 22 AC4 ARG A 75 THR A 94 1 20 HELIX 23 AC5 VAL A 113 GLY A 117 5 5 HELIX 24 AC6 SER A 118 GLN A 135 1 18 HELIX 25 AC7 VAL A 145 MET A 155 1 11 HELIX 26 AC8 THR A 165 ALA A 167 5 3 HELIX 27 AC9 GLU A 168 THR A 175 1 8 HELIX 28 AD1 PRO A 177 ILE A 181 5 5 HELIX 29 AD2 GLY A 185 MET A 195 1 11 HELIX 30 AD3 THR A 199 LYS A 205 1 7 HELIX 31 AD4 ASP A 207 ARG A 214 1 8 HELIX 32 AD5 GLY A 216 SER A 226 1 11 HELIX 33 AD6 HIS A 255 LYS A 278 1 24 HELIX 34 AD7 ASN A 308 ARG A 324 1 17 SHEET 1 AA1 5 ILE F 97 SER F 101 0 SHEET 2 AA1 5 GLU F 104 ASP F 108 -1 O TYR F 106 N GLU F 98 SHEET 3 AA1 5 ILE F 4 MET F 9 -1 N ILE F 5 O LEU F 107 SHEET 4 AA1 5 ALA F 138 ALA F 143 -1 O GLY F 141 N HIS F 6 SHEET 5 AA1 5 GLN F 161 VAL F 163 1 O PHE F 162 N VAL F 142 SHEET 1 AA2 3 ILE F 41 ALA F 44 0 SHEET 2 AA2 3 ILE F 29 GLY F 32 -1 N ILE F 31 O SER F 42 SHEET 3 AA2 3 THR F 70 LEU F 72 1 O THR F 70 N ALA F 30 SHEET 1 AA3 4 SER F 242 ILE F 253 0 SHEET 2 AA3 4 VAL F 329 THR F 337 -1 O LEU F 334 N VAL F 245 SHEET 3 AA3 4 ARG F 285 PHE F 292 -1 N GLY F 287 O HIS F 335 SHEET 4 AA3 4 GLN F 297 VAL F 303 -1 O HIS F 302 N GLN F 286 SHEET 1 AA4 5 ILE A 97 SER A 101 0 SHEET 2 AA4 5 GLU A 104 ASP A 108 -1 O TYR A 106 N GLU A 98 SHEET 3 AA4 5 ILE A 4 MET A 9 -1 N ILE A 5 O LEU A 107 SHEET 4 AA4 5 ALA A 138 ALA A 143 -1 O SER A 139 N ASP A 8 SHEET 5 AA4 5 GLN A 161 VAL A 163 1 O PHE A 162 N VAL A 142 SHEET 1 AA5 3 ILE A 41 ALA A 44 0 SHEET 2 AA5 3 ILE A 29 GLY A 32 -1 N ILE A 31 O SER A 42 SHEET 3 AA5 3 THR A 70 LEU A 72 1 O LEU A 72 N ALA A 30 SHEET 1 AA6 4 SER A 242 ILE A 253 0 SHEET 2 AA6 4 VAL A 329 THR A 337 -1 O LEU A 334 N VAL A 245 SHEET 3 AA6 4 ARG A 285 PHE A 292 -1 N GLY A 287 O HIS A 335 SHEET 4 AA6 4 GLN A 297 VAL A 303 -1 O THR A 298 N LEU A 290 LINK PA ATTP F 900 O3'A DC H 873 1555 1555 1.57 LINK PA ATTP A 900 O3'A DC C 873 1555 1555 1.58 LINK OD1AASP F 8 MG MG F 901 1555 1555 2.11 LINK OD1BASP F 8 MG MG F 901 1555 1555 2.55 LINK OD1BASP F 8 MG MG F 902 1555 1555 2.40 LINK OD2AASP F 8 MG MG F 902 1555 1555 2.93 LINK O MET F 9 MG MG F 901 1555 1555 2.26 LINK OD2 ASP F 103 MG MG F 901 1555 1555 2.27 LINK OD1 ASP F 103 MG MG F 902 1555 1555 2.21 LINK OE1 GLU F 104 MG MG F 902 1555 1555 1.92 LINK O1AATTP F 900 MG MG F 901 1555 1555 2.14 LINK O1BATTP F 900 MG MG F 901 1555 1555 1.94 LINK O3GATTP F 900 MG MG F 901 1555 1555 2.41 LINK O1AATTP F 900 MG MG F 902 1555 1555 2.21 LINK MG MG F 901 O1 BDPO F 903 1555 1555 2.47 LINK MG MG F 901 O7 BDPO F 903 1555 1555 2.51 LINK MG MG F 901 OP1B DT H 874 1555 1555 2.22 LINK MG MG F 902 O3'A DC H 873 1555 1555 2.74 LINK MG MG F 902 O3'B DC H 873 1555 1555 2.59 LINK MG MG F 902 OP1B DT H 874 1555 1555 2.16 LINK OD1 ASP A 8 MG MG A 901 1555 1555 2.40 LINK OD1 ASP A 8 MG MG A 902 1555 1555 2.50 LINK O MET A 9 MG MG A 901 1555 1555 2.38 LINK OD2 ASP A 103 MG MG A 901 1555 1555 2.37 LINK OD1 ASP A 103 MG MG A 902 1555 1555 2.27 LINK OE2 GLU A 104 MG MG A 902 1555 1555 1.92 LINK O2AATTP A 900 MG MG A 901 1555 1555 2.20 LINK O2BATTP A 900 MG MG A 901 1555 1555 2.19 LINK O2GATTP A 900 MG MG A 901 1555 1555 2.57 LINK O2AATTP A 900 MG MG A 902 1555 1555 2.27 LINK MG MG A 901 O2 BDPO A 903 1555 1555 2.46 LINK MG MG A 901 O7 BDPO A 903 1555 1555 2.52 LINK MG MG A 901 OP1B DT C 874 1555 1555 2.15 LINK MG MG A 902 O3'B DC C 873 1555 1555 2.61 LINK MG MG A 902 OP1B DT C 874 1555 1555 2.08 CISPEP 1 LYS F 157 PRO F 158 0 -0.36 CISPEP 2 LYS A 157 PRO A 158 0 -2.85 SITE 1 AC1 7 ASP F 8 MET F 9 ASP F 103 TTP F 900 SITE 2 AC1 7 MG F 902 DPO F 903 DT H 874 SITE 1 AC2 7 ASP F 8 ASP F 103 GLU F 104 TTP F 900 SITE 2 AC2 7 MG F 901 DC H 873 DT H 874 SITE 1 AC3 14 ASP F 8 MET F 9 ASP F 10 CYS F 11 SITE 2 AC3 14 PHE F 12 THR F 43 ARG F 49 ASP F 103 SITE 3 AC3 14 LYS F 157 TTP F 900 MG F 901 HOH F1005 SITE 4 AC3 14 DT H 874 HOH H1017 SITE 1 AC4 8 ASP A 8 MET A 9 ASP A 103 LYS A 157 SITE 2 AC4 8 TTP A 900 MG A 902 DPO A 903 DT C 874 SITE 1 AC5 7 ASP A 8 ASP A 103 GLU A 104 TTP A 900 SITE 2 AC5 7 MG A 901 DC C 873 DT C 874 SITE 1 AC6 13 MET A 9 ASP A 10 CYS A 11 PHE A 12 SITE 2 AC6 13 THR A 43 ARG A 49 ASP A 103 LYS A 157 SITE 3 AC6 13 TTP A 900 MG A 901 HOH A1001 DT C 874 SITE 4 AC6 13 HOH C1007 SITE 1 AC7 27 ASP A 8 MET A 9 ASP A 10 CYS A 11 SITE 2 AC7 27 PHE A 12 PHE A 13 SER A 42 THR A 43 SITE 3 AC7 27 ARG A 49 ASP A 103 GLU A 104 LYS A 150 SITE 4 AC7 27 LYS A 157 MG A 901 MG A 902 DPO A 903 SITE 5 AC7 27 HOH A1001 DA B 840 DG B 841 DG B 842 SITE 6 AC7 27 DC C 872 DT C 874 HOH C1007 HOH C1016 SITE 7 AC7 27 HOH C1022 HOH C1026 HOH C1029 SITE 1 AC8 27 ASP F 8 MET F 9 ASP F 10 CYS F 11 SITE 2 AC8 27 PHE F 12 PHE F 13 SER F 42 THR F 43 SITE 3 AC8 27 ARG F 49 ASP F 103 GLU F 104 LYS F 150 SITE 4 AC8 27 LYS F 157 MG F 901 MG F 902 DPO F 903 SITE 5 AC8 27 HOH F1005 HOH F1021 DA G 840 DG G 841 SITE 6 AC8 27 DG G 842 DC H 872 DT H 874 HOH H1009 SITE 7 AC8 27 HOH H1015 HOH H1017 HOH H1021 CRYST1 86.070 57.090 109.990 90.00 94.50 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011618 0.000000 0.000914 0.00000 SCALE2 0.000000 0.017516 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009120 0.00000