PDB Short entry for 6ASO HEADER SPLICING 25-AUG-17 6ASO TITLE STRUCTURE OF YEAST U6 SNRNP WITH 3'-PHOSPHATE TERMINATED U6 RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: U4/U6 SNRNA-ASSOCIATED-SPLICING FACTOR PRP24; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: U4/U6 SNRNP PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: SMALL NUCLEAR RIBONUCLEOPROTEIN D HOMOLOG SNP3; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: SMX4 PROTEIN; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM4; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5; COMPND 22 CHAIN: E; COMPND 23 ENGINEERED: YES; COMPND 24 MOL_ID: 6; COMPND 25 MOLECULE: U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM6; COMPND 26 CHAIN: F; COMPND 27 ENGINEERED: YES; COMPND 28 MOL_ID: 7; COMPND 29 MOLECULE: U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7; COMPND 30 CHAIN: G; COMPND 31 ENGINEERED: YES; COMPND 32 MOL_ID: 8; COMPND 33 MOLECULE: U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8; COMPND 34 CHAIN: H; COMPND 35 ENGINEERED: YES; COMPND 36 MOL_ID: 9; COMPND 37 MOLECULE: SACCHAROMYCES CEREVISIAE STRAIN HB_S_GIMBLETTROAD_9 COMPND 38 CHROMOSOME XII SEQUENCE; COMPND 39 CHAIN: I; COMPND 40 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: PRP24, YMR268C, YM8156.10C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 4932; SOURCE 13 STRAIN: ATCC 204508 / S288C; SOURCE 14 GENE: LSM2, SMX5, SNP3, YBL026W, YBL0425; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 19 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 20 ORGANISM_TAXID: 4932; SOURCE 21 STRAIN: ATCC 204508 / S288C; SOURCE 22 GENE: LSM3, SMX4, USS2, YLR438C-A; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 27 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 28 ORGANISM_TAXID: 4932; SOURCE 29 STRAIN: ATCC 204508 / S288C; SOURCE 30 GENE: LSM4, SDB23, USS1, YER112W; SOURCE 31 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 32 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 33 MOL_ID: 5; SOURCE 34 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 35 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 36 ORGANISM_TAXID: 4932; SOURCE 37 STRAIN: ATCC 204508 / S288C; SOURCE 38 GENE: LSM5, YER146W; SOURCE 39 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 40 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 41 MOL_ID: 6; SOURCE 42 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 43 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 44 ORGANISM_TAXID: 4932; SOURCE 45 STRAIN: YJM789; SOURCE 46 GENE: LSM6, SCY_1265; SOURCE 47 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 48 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 49 MOL_ID: 7; SOURCE 50 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 51 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 52 ORGANISM_TAXID: 4932; SOURCE 53 STRAIN: ATCC 204508 / S288C; SOURCE 54 GENE: LSM7, YNL147W, N1202, N1780; SOURCE 55 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 56 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 57 MOL_ID: 8; SOURCE 58 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 59 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 60 ORGANISM_TAXID: 4932; SOURCE 61 STRAIN: ATCC 204508 / S288C; SOURCE 62 GENE: LSM8, YJR022W, J1464, YJR83.16; SOURCE 63 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 64 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 65 MOL_ID: 9; SOURCE 66 SYNTHETIC: YES; SOURCE 67 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 68 ORGANISM_TAXID: 4932 KEYWDS LSM2-8 SPLICEOSOME U6 PRP24, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR E.J.MONTEMAYOR,D.A.BROW,S.E.BUTCHER REVDAT 4 04-OCT-23 6ASO 1 REMARK REVDAT 3 21-OCT-20 6ASO 1 REMARK LINK REVDAT 2 01-JAN-20 6ASO 1 REMARK REVDAT 1 09-MAY-18 6ASO 0 JRNL AUTH E.J.MONTEMAYOR,A.L.DIDYCHUK,A.D.YAKE,G.K.SIDHU,D.A.BROW, JRNL AUTH 2 S.E.BUTCHER JRNL TITL ARCHITECTURE OF THE U6 SNRNP REVEALS SPECIFIC RECOGNITION OF JRNL TITL 2 3'-END PROCESSED U6 SNRNA. JRNL REF NAT COMMUN V. 9 1749 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29717126 JRNL DOI 10.1038/S41467-018-04145-4 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 73.6 REMARK 3 NUMBER OF REFLECTIONS : 32994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.880 REMARK 3 FREE R VALUE TEST SET COUNT : 2600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.6403 - 7.2280 0.99 2248 192 0.2283 0.2241 REMARK 3 2 7.2280 - 5.7389 0.99 2208 184 0.2308 0.2928 REMARK 3 3 5.7389 - 5.0140 1.00 2176 200 0.1841 0.2263 REMARK 3 4 5.0140 - 4.5558 1.00 2180 183 0.1492 0.2078 REMARK 3 5 4.5558 - 4.2294 1.00 2197 184 0.1448 0.2050 REMARK 3 6 4.2294 - 3.9801 1.00 2163 194 0.1592 0.2284 REMARK 3 7 3.9801 - 3.7808 1.00 2175 179 0.1685 0.2364 REMARK 3 8 3.7808 - 3.6163 1.00 2159 181 0.1780 0.2506 REMARK 3 9 3.6163 - 3.4771 1.00 2164 184 0.1942 0.2716 REMARK 3 10 3.4771 - 3.3571 0.96 2074 182 0.2098 0.2662 REMARK 3 11 3.3571 - 3.2522 0.82 1783 145 0.2161 0.2885 REMARK 3 12 3.2522 - 3.1592 0.72 1571 135 0.2299 0.3023 REMARK 3 13 3.1592 - 3.0761 0.62 1348 116 0.2788 0.2752 REMARK 3 14 3.0761 - 3.0010 0.55 1179 106 0.2738 0.3149 REMARK 3 15 3.0010 - 2.9328 0.46 987 82 0.2723 0.3138 REMARK 3 16 2.9328 - 2.8704 0.37 787 66 0.2757 0.3503 REMARK 3 17 2.8704 - 2.8130 0.29 616 54 0.2884 0.3541 REMARK 3 18 2.8130 - 2.7599 0.14 296 25 0.2780 0.3620 REMARK 3 19 2.7599 - 2.7106 0.04 83 8 0.3495 0.2673 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 8990 REMARK 3 ANGLE : 1.656 12455 REMARK 3 CHIRALITY : 0.086 1513 REMARK 3 PLANARITY : 0.011 1323 REMARK 3 DIHEDRAL : 17.974 3601 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'B' ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3110 87.1589 39.2833 REMARK 3 T TENSOR REMARK 3 T11: 0.5998 T22: 1.3144 REMARK 3 T33: 0.4167 T12: 0.3479 REMARK 3 T13: -0.1535 T23: -0.1322 REMARK 3 L TENSOR REMARK 3 L11: 0.8919 L22: 3.0412 REMARK 3 L33: 3.0014 L12: 0.4849 REMARK 3 L13: 0.2057 L23: -0.9318 REMARK 3 S TENSOR REMARK 3 S11: 0.0957 S12: -1.0565 S13: -0.1797 REMARK 3 S21: 0.6478 S22: 0.2120 S23: -0.5518 REMARK 3 S31: 0.0452 S32: 0.9710 S33: -0.0591 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'C' ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0032 97.0287 39.1487 REMARK 3 T TENSOR REMARK 3 T11: 0.7067 T22: 0.8265 REMARK 3 T33: -0.0992 T12: 0.2863 REMARK 3 T13: -0.0212 T23: -0.5484 REMARK 3 L TENSOR REMARK 3 L11: 1.8929 L22: 3.3645 REMARK 3 L33: 2.7186 L12: 0.3240 REMARK 3 L13: -0.4859 L23: 0.4891 REMARK 3 S TENSOR REMARK 3 S11: 0.0574 S12: -1.5345 S13: 0.7628 REMARK 3 S21: 0.4419 S22: 0.0687 S23: -0.2284 REMARK 3 S31: -0.4155 S32: 0.2868 S33: -0.1880 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'D' ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0993 58.3290 50.2440 REMARK 3 T TENSOR REMARK 3 T11: 1.7862 T22: 1.4775 REMARK 3 T33: 0.7061 T12: 0.4857 REMARK 3 T13: 0.0545 T23: 1.0365 REMARK 3 L TENSOR REMARK 3 L11: 1.0729 L22: 2.2744 REMARK 3 L33: 1.2345 L12: 0.3072 REMARK 3 L13: 0.2384 L23: -0.6962 REMARK 3 S TENSOR REMARK 3 S11: 0.2789 S12: 0.0445 S13: -0.2140 REMARK 3 S21: -0.2000 S22: 0.0497 S23: -0.0363 REMARK 3 S31: 0.4806 S32: -0.6190 S33: 0.2314 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'E' ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7666 77.0783 40.0474 REMARK 3 T TENSOR REMARK 3 T11: 0.7537 T22: 1.1951 REMARK 3 T33: 0.6492 T12: 0.0351 REMARK 3 T13: 0.2597 T23: 0.2673 REMARK 3 L TENSOR REMARK 3 L11: 3.0028 L22: 4.8189 REMARK 3 L33: 4.6512 L12: 1.0936 REMARK 3 L13: -0.4581 L23: -1.1389 REMARK 3 S TENSOR REMARK 3 S11: 0.0998 S12: -0.8779 S13: 0.1251 REMARK 3 S21: 0.0005 S22: 0.0399 S23: 0.4697 REMARK 3 S31: 0.6133 S32: -0.6037 S33: -0.0496 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'F' ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5574 91.9726 34.4837 REMARK 3 T TENSOR REMARK 3 T11: 0.6554 T22: 0.7714 REMARK 3 T33: -0.1929 T12: 0.4816 REMARK 3 T13: 0.1244 T23: -0.0646 REMARK 3 L TENSOR REMARK 3 L11: 3.3242 L22: 2.6528 REMARK 3 L33: 3.1685 L12: 0.7048 REMARK 3 L13: -0.6650 L23: -1.7684 REMARK 3 S TENSOR REMARK 3 S11: 0.3788 S12: -1.4535 S13: 0.6351 REMARK 3 S21: 0.1219 S22: 0.4719 S23: 0.7946 REMARK 3 S31: -0.5420 S32: -0.3538 S33: 0.3393 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN 'G' ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6876 61.7470 46.3970 REMARK 3 T TENSOR REMARK 3 T11: 1.3264 T22: 1.2916 REMARK 3 T33: 0.8576 T12: -0.1955 REMARK 3 T13: 0.1407 T23: 0.5189 REMARK 3 L TENSOR REMARK 3 L11: 2.7385 L22: 1.2822 REMARK 3 L33: 1.3358 L12: -0.1307 REMARK 3 L13: 1.9354 L23: 0.0339 REMARK 3 S TENSOR REMARK 3 S11: -0.2841 S12: -0.5840 S13: -0.3245 REMARK 3 S21: 0.7262 S22: 0.5897 S23: 0.6907 REMARK 3 S31: 1.1293 S32: -0.3678 S33: 0.0618 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN 'H' ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3322 76.9976 51.4466 REMARK 3 T TENSOR REMARK 3 T11: 1.1176 T22: 1.7189 REMARK 3 T33: 0.5555 T12: 0.3822 REMARK 3 T13: 0.0243 T23: 0.2184 REMARK 3 L TENSOR REMARK 3 L11: 0.7636 L22: 1.9839 REMARK 3 L33: 1.7484 L12: 0.6143 REMARK 3 L13: 1.0913 L23: 1.0545 REMARK 3 S TENSOR REMARK 3 S11: 0.0406 S12: -0.8417 S13: -0.2784 REMARK 3 S21: 0.8796 S22: -0.0392 S23: -0.6528 REMARK 3 S31: 0.5415 S32: 0.1276 S33: 0.0148 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN 'I' AND ((RESSEQ 33:38))) OR (CHAIN 'I' AND REMARK 3 ((RESSEQ 93:98))) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0059 59.9806 30.6847 REMARK 3 T TENSOR REMARK 3 T11: 1.6019 T22: 2.1382 REMARK 3 T33: 1.4596 T12: 0.3619 REMARK 3 T13: 0.4197 T23: 0.1732 REMARK 3 L TENSOR REMARK 3 L11: 2.8121 L22: 5.5522 REMARK 3 L33: 4.1697 L12: -1.9385 REMARK 3 L13: 3.1693 L23: -3.7630 REMARK 3 S TENSOR REMARK 3 S11: 0.9028 S12: -2.7708 S13: -0.4296 REMARK 3 S21: 1.4940 S22: 1.8343 S23: 2.8685 REMARK 3 S31: 0.6820 S32: -1.8173 S33: -1.9822 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ASO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229769. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40745 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.711 REMARK 200 RESOLUTION RANGE LOW (A) : 90.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 60.70 REMARK 200 R MERGE (I) : 0.44600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 58.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5VSU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 280 MM SODIUM POTASSIUM TARTRATE 22.5 REMARK 280 % GLYCEROL 17.5 % PEG 3,350 1 MM MANGANESE CHLORIDE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.69500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: NONAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -129.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 27 REMARK 465 LYS A 28 REMARK 465 LYS A 29 REMARK 465 ASN A 399 REMARK 465 HIS A 400 REMARK 465 SER A 401 REMARK 465 MET A 402 REMARK 465 LYS A 403 REMARK 465 HIS A 404 REMARK 465 VAL A 405 REMARK 465 LYS A 406 REMARK 465 PRO A 407 REMARK 465 SER A 408 REMARK 465 CYS A 409 REMARK 465 ILE A 410 REMARK 465 ASN A 411 REMARK 465 MET A 412 REMARK 465 MET A 413 REMARK 465 GLU A 414 REMARK 465 LYS A 415 REMARK 465 GLY A 416 REMARK 465 PRO A 417 REMARK 465 ASN A 418 REMARK 465 LEU A 419 REMARK 465 GLN A 420 REMARK 465 VAL A 421 REMARK 465 LYS A 422 REMARK 465 LYS A 423 REMARK 465 LYS A 424 REMARK 465 ILE A 425 REMARK 465 PRO A 426 REMARK 465 ASP A 427 REMARK 465 LYS A 428 REMARK 465 GLN A 429 REMARK 465 GLU A 430 REMARK 465 GLN A 431 REMARK 465 MET A 432 REMARK 465 SER A 433 REMARK 465 ASN A 434 REMARK 465 ASP A 435 REMARK 465 ASP A 436 REMARK 465 PHE A 437 REMARK 465 ARG A 438 REMARK 465 LYS A 439 REMARK 465 MET A 440 REMARK 465 PHE A 441 REMARK 465 LEU A 442 REMARK 465 GLY A 443 REMARK 465 GLU A 444 REMARK 465 HIS A 445 REMARK 465 HIS A 446 REMARK 465 HIS A 447 REMARK 465 HIS A 448 REMARK 465 HIS A 449 REMARK 465 HIS A 450 REMARK 465 SER C 80 REMARK 465 GLU C 81 REMARK 465 ASP C 82 REMARK 465 ASP C 83 REMARK 465 ASP C 84 REMARK 465 GLY C 85 REMARK 465 ALA C 86 REMARK 465 VAL C 87 REMARK 465 GLU C 88 REMARK 465 ILE C 89 REMARK 465 TRP C 90 REMARK 465 SER C 91 REMARK 465 HIS C 92 REMARK 465 PRO C 93 REMARK 465 GLN C 94 REMARK 465 PHE C 95 REMARK 465 GLU C 96 REMARK 465 LYS C 97 REMARK 465 MET D 1 REMARK 465 GLU D 45 REMARK 465 TYR D 46 REMARK 465 SER D 47 REMARK 465 GLU D 48 REMARK 465 GLU D 49 REMARK 465 SER D 50 REMARK 465 ALA D 51 REMARK 465 ILE D 52 REMARK 465 ASN D 53 REMARK 465 SER D 54 REMARK 465 GLU D 55 REMARK 465 ASP D 56 REMARK 465 ASN D 57 REMARK 465 ALA D 58 REMARK 465 GLU D 59 REMARK 465 SER D 60 REMARK 465 SER D 61 REMARK 465 LYS D 62 REMARK 465 ALA D 63 REMARK 465 VAL D 64 REMARK 465 LYS D 65 REMARK 465 LEU D 66 REMARK 465 ASN D 67 REMARK 465 GLU D 68 REMARK 465 ILE D 85 REMARK 465 ILE D 86 REMARK 465 ASP D 87 REMARK 465 LYS D 88 REMARK 465 VAL D 89 REMARK 465 LYS D 90 REMARK 465 GLN D 91 REMARK 465 GLN D 92 REMARK 465 ILE D 93 REMARK 465 MET E 1 REMARK 465 SER E 2 REMARK 465 LEU E 3 REMARK 465 PRO E 4 REMARK 465 GLU E 5 REMARK 465 ILE E 6 REMARK 465 LYS E 86 REMARK 465 LYS E 87 REMARK 465 THR E 88 REMARK 465 PRO E 89 REMARK 465 THR E 90 REMARK 465 GLU E 91 REMARK 465 ALA E 92 REMARK 465 LEU E 93 REMARK 465 GLY F -1 REMARK 465 SER F 0 REMARK 465 MET F 1 REMARK 465 SER F 2 REMARK 465 GLY F 3 REMARK 465 LYS F 4 REMARK 465 ALA F 5 REMARK 465 SER F 6 REMARK 465 THR F 7 REMARK 465 GLU F 8 REMARK 465 GLY F 9 REMARK 465 LYS F 85 REMARK 465 ILE F 86 REMARK 465 MET G 1 REMARK 465 HIS G 2 REMARK 465 GLN G 3 REMARK 465 GLN G 4 REMARK 465 HIS G 5 REMARK 465 SER G 6 REMARK 465 LYS G 7 REMARK 465 SER G 8 REMARK 465 GLU G 9 REMARK 465 ASN G 10 REMARK 465 LYS G 11 REMARK 465 PRO G 12 REMARK 465 GLN G 13 REMARK 465 GLN G 14 REMARK 465 GLN G 15 REMARK 465 ARG G 16 REMARK 465 LYS G 17 REMARK 465 LYS G 18 REMARK 465 PHE G 19 REMARK 465 GLU G 20 REMARK 465 GLY G 21 REMARK 465 PRO G 22 REMARK 465 LYS G 23 REMARK 465 ARG G 24 REMARK 465 GLU G 25 REMARK 465 ASN G 72 REMARK 465 PRO G 73 REMARK 465 ASP G 74 REMARK 465 ASP G 75 REMARK 465 GLU G 76 REMARK 465 ASN G 77 REMARK 465 ASN G 78 REMARK 465 THR G 79 REMARK 465 GLU G 80 REMARK 465 LEU G 81 REMARK 465 ILE G 82 REMARK 465 SER G 83 REMARK 465 LYS G 84 REMARK 465 GLU G 106 REMARK 465 GLY G 107 REMARK 465 SER G 108 REMARK 465 ASP G 109 REMARK 465 VAL G 110 REMARK 465 LEU G 111 REMARK 465 TYR G 112 REMARK 465 MET G 113 REMARK 465 GLN G 114 REMARK 465 LYS G 115 REMARK 465 MET H 1 REMARK 465 ILE H 45 REMARK 465 SER H 46 REMARK 465 GLY H 65 REMARK 465 LEU H 66 REMARK 465 ILE H 67 REMARK 465 ASP H 68 REMARK 465 ALA H 69 REMARK 465 GLU H 70 REMARK 465 ASN H 71 REMARK 465 ASP H 72 REMARK 465 ASP H 73 REMARK 465 SER H 74 REMARK 465 LEU H 75 REMARK 465 ALA H 76 REMARK 465 PRO H 77 REMARK 465 ILE H 78 REMARK 465 ASP H 79 REMARK 465 GLU H 80 REMARK 465 LYS H 81 REMARK 465 LYS H 82 REMARK 465 VAL H 83 REMARK 465 PRO H 84 REMARK 465 MET H 85 REMARK 465 LEU H 86 REMARK 465 LYS H 109 REMARK 465 HIS H 110 REMARK 465 HIS H 111 REMARK 465 HIS H 112 REMARK 465 HIS H 113 REMARK 465 HIS H 114 REMARK 465 HIS H 115 REMARK 465 G I 30 REMARK 465 G I 31 REMARK 465 U I 32 REMARK 465 U I 80 REMARK 465 A I 99 REMARK 465 U I 100 REMARK 465 U I 101 REMARK 465 U I 102 REMARK 465 A I 103 REMARK 465 U I 104 REMARK 465 U I 105 REMARK 465 U I 106 REMARK 465 C I 107 REMARK 465 G I 108 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 340 CG CD OE1 OE2 REMARK 470 LYS A 341 CG CD CE NZ REMARK 470 ASP B 47 CG OD1 OD2 REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 95 CG CD CE NZ REMARK 470 LYS H 17 CG CD CE NZ REMARK 470 CYS H 22 SG REMARK 470 ILE H 38 CG1 CG2 CD1 REMARK 470 CYS H 51 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 A I 56 O HOH I 301 2.12 REMARK 500 O ILE H 93 N ASN H 95 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 78 OP1 U I 74 2555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 40 CB - CG - CD1 ANGL. DEV. = -11.7 DEGREES REMARK 500 LEU A 114 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 LEU A 136 CB - CG - CD2 ANGL. DEV. = -14.4 DEGREES REMARK 500 ARG A 148 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 158 CG - CD - NE ANGL. DEV. = 15.6 DEGREES REMARK 500 ARG A 159 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 LEU A 276 CB - CG - CD2 ANGL. DEV. = -13.4 DEGREES REMARK 500 LEU A 327 CB - CG - CD1 ANGL. DEV. = -22.7 DEGREES REMARK 500 LEU A 369 CB - CG - CD2 ANGL. DEV. = -10.6 DEGREES REMARK 500 LEU C 5 CA - CB - CG ANGL. DEV. = -17.3 DEGREES REMARK 500 LEU C 75 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 C I 48 C6 - N1 - C2 ANGL. DEV. = -3.6 DEGREES REMARK 500 C I 48 C2 - N3 - C4 ANGL. DEV. = 3.0 DEGREES REMARK 500 C I 48 C5 - C6 - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 A I 49 C2 - N3 - C4 ANGL. DEV. = -3.1 DEGREES REMARK 500 G I 52 C6 - C5 - N7 ANGL. DEV. = -3.8 DEGREES REMARK 500 G I 52 N1 - C6 - O6 ANGL. DEV. = 4.3 DEGREES REMARK 500 G I 52 C5 - C6 - O6 ANGL. DEV. = -3.9 DEGREES REMARK 500 A I 56 N9 - C4 - C5 ANGL. DEV. = -2.7 DEGREES REMARK 500 A I 56 N1 - C6 - N6 ANGL. DEV. = 5.0 DEGREES REMARK 500 U I 111 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 306 -164.62 -72.61 REMARK 500 SER A 307 -28.07 -160.28 REMARK 500 ASP B 12 8.12 82.16 REMARK 500 ASP B 22 -5.74 91.75 REMARK 500 ASP B 47 -63.40 55.85 REMARK 500 GLU B 48 63.53 -106.50 REMARK 500 LYS B 49 19.23 -65.22 REMARK 500 LEU B 54 -145.29 -118.39 REMARK 500 THR B 92 42.38 -80.50 REMARK 500 GLU C 2 -73.38 -112.36 REMARK 500 ASN C 53 -101.20 50.38 REMARK 500 GLU C 55 136.94 74.34 REMARK 500 LEU C 56 18.48 157.28 REMARK 500 SER C 77 -158.32 -151.83 REMARK 500 ALA D 10 35.10 -92.53 REMARK 500 LYS D 11 84.59 -66.86 REMARK 500 ASN D 42 68.49 62.31 REMARK 500 LYS D 77 -60.10 -91.77 REMARK 500 ASP D 83 -86.10 157.64 REMARK 500 GLU F 57 -50.84 71.25 REMARK 500 LEU H 5 33.66 -96.05 REMARK 500 THR H 34 37.91 38.07 REMARK 500 ALA H 53 102.96 92.67 REMARK 500 GLU H 94 55.13 -46.94 REMARK 500 ASN H 95 63.55 22.69 REMARK 500 GLU H 96 -40.68 36.34 REMARK 500 LYS H 107 36.60 -95.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN H 95 GLU H 96 124.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG I 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 74 OD2 REMARK 620 2 U I 74 OP2 88.6 REMARK 620 3 A I 75 OP2 86.0 3.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG I 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A I 40 O3' REMARK 620 2 A I 40 O2' 56.1 REMARK 620 3 A I 41 OP2 54.0 106.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K I 202 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G I 60 O6 REMARK 620 2 G I 86 O6 58.7 REMARK 620 3 U I 87 O4 68.1 67.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN I 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K I 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG I 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG I 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VSU RELATED DB: PDB REMARK 900 SAME COMPLEX AS 5VSU, BUT WITH A DIFFERENT RNA DBREF 6ASO A 28 444 UNP P49960 PRP24_YEAST 28 444 DBREF 6ASO B 1 95 UNP P38203 LSM2_YEAST 1 95 DBREF 6ASO C 1 89 UNP P57743 LSM3_YEAST 1 89 DBREF 6ASO D 1 93 UNP P40070 LSM4_YEAST 1 93 DBREF 6ASO E 1 93 UNP P40089 LSM5_YEAST 1 93 DBREF 6ASO F 1 86 UNP A6ZYX7 LSM6_YEAS7 1 86 DBREF 6ASO G 1 115 UNP P53905 LSM7_YEAST 1 115 DBREF 6ASO H 1 109 UNP P47093 LSM8_YEAST 1 109 DBREF1 6ASO I 30 113 GB CP008060.1 DBREF2 6ASO I 1039023481 365992 366075 SEQADV 6ASO MET A 27 UNP P49960 INITIATING METHIONINE SEQADV 6ASO HIS A 445 UNP P49960 EXPRESSION TAG SEQADV 6ASO HIS A 446 UNP P49960 EXPRESSION TAG SEQADV 6ASO HIS A 447 UNP P49960 EXPRESSION TAG SEQADV 6ASO HIS A 448 UNP P49960 EXPRESSION TAG SEQADV 6ASO HIS A 449 UNP P49960 EXPRESSION TAG SEQADV 6ASO HIS A 450 UNP P49960 EXPRESSION TAG SEQADV 6ASO TRP C 90 UNP P57743 EXPRESSION TAG SEQADV 6ASO SER C 91 UNP P57743 EXPRESSION TAG SEQADV 6ASO HIS C 92 UNP P57743 EXPRESSION TAG SEQADV 6ASO PRO C 93 UNP P57743 EXPRESSION TAG SEQADV 6ASO GLN C 94 UNP P57743 EXPRESSION TAG SEQADV 6ASO PHE C 95 UNP P57743 EXPRESSION TAG SEQADV 6ASO GLU C 96 UNP P57743 EXPRESSION TAG SEQADV 6ASO LYS C 97 UNP P57743 EXPRESSION TAG SEQADV 6ASO GLY F -1 UNP A6ZYX7 EXPRESSION TAG SEQADV 6ASO SER F 0 UNP A6ZYX7 EXPRESSION TAG SEQADV 6ASO HIS H 110 UNP P47093 EXPRESSION TAG SEQADV 6ASO HIS H 111 UNP P47093 EXPRESSION TAG SEQADV 6ASO HIS H 112 UNP P47093 EXPRESSION TAG SEQADV 6ASO HIS H 113 UNP P47093 EXPRESSION TAG SEQADV 6ASO HIS H 114 UNP P47093 EXPRESSION TAG SEQADV 6ASO HIS H 115 UNP P47093 EXPRESSION TAG SEQADV 6ASO G I 62 GB 103902348 A 66024 CONFLICT SEQADV 6ASO G I 79 GB 103902348 A 66041 CONFLICT SEQRES 1 A 424 MET LYS LYS ALA ASN GLU ALA LEU THR ARG ASN ARG GLU SEQRES 2 A 424 LEU THR THR VAL LEU VAL LYS ASN LEU PRO LYS SER TYR SEQRES 3 A 424 ASN GLN ASN LYS VAL TYR LYS TYR PHE LYS HIS CYS GLY SEQRES 4 A 424 PRO ILE ILE HIS VAL ASP VAL ALA ASP SER LEU LYS LYS SEQRES 5 A 424 ASN PHE ARG PHE ALA ARG ILE GLU PHE ALA ARG TYR ASP SEQRES 6 A 424 GLY ALA LEU ALA ALA ILE THR LYS THR HIS LYS VAL VAL SEQRES 7 A 424 GLY GLN ASN GLU ILE ILE VAL SER HIS LEU THR GLU CYS SEQRES 8 A 424 THR LEU TRP MET THR ASN PHE PRO PRO SER TYR THR GLN SEQRES 9 A 424 ARG ASN ILE ARG ASP LEU LEU GLN ASP ILE ASN VAL VAL SEQRES 10 A 424 ALA LEU SER ILE ARG LEU PRO SER LEU ARG PHE ASN THR SEQRES 11 A 424 SER ARG ARG PHE ALA TYR ILE ASP VAL THR SER LYS GLU SEQRES 12 A 424 ASP ALA ARG TYR CYS VAL GLU LYS LEU ASN GLY LEU LYS SEQRES 13 A 424 ILE GLU GLY TYR THR LEU VAL THR LYS VAL SER ASN PRO SEQRES 14 A 424 LEU GLU LYS SER LYS ARG THR ASP SER ALA THR LEU GLU SEQRES 15 A 424 GLY ARG GLU ILE MET ILE ARG ASN LEU SER THR GLU LEU SEQRES 16 A 424 LEU ASP GLU ASN LEU LEU ARG GLU SER PHE GLU GLY PHE SEQRES 17 A 424 GLY SER ILE GLU LYS ILE ASN ILE PRO ALA GLY GLN LYS SEQRES 18 A 424 GLU HIS SER PHE ASN ASN CYS CYS ALA PHE MET VAL PHE SEQRES 19 A 424 GLU ASN LYS ASP SER ALA GLU ARG ALA LEU GLN MET ASN SEQRES 20 A 424 ARG SER LEU LEU GLY ASN ARG GLU ILE SER VAL SER LEU SEQRES 21 A 424 ALA ASP LYS LYS PRO PHE LEU GLU ARG ASN GLU VAL LYS SEQRES 22 A 424 ARG LEU LEU ALA SER ARG ASN SER LYS GLU LEU GLU THR SEQRES 23 A 424 LEU ILE CYS LEU PHE PRO LEU SER ASP LYS VAL SER PRO SEQRES 24 A 424 SER LEU ILE CYS GLN PHE LEU GLN GLU GLU ILE HIS ILE SEQRES 25 A 424 ASN GLU LYS ASP ILE ARG LYS ILE LEU LEU VAL SER ASP SEQRES 26 A 424 PHE ASN GLY ALA ILE ILE ILE PHE ARG ASP SER LYS PHE SEQRES 27 A 424 ALA ALA LYS MET LEU MET ILE LEU ASN GLY SER GLN PHE SEQRES 28 A 424 GLN GLY LYS VAL ILE ARG SER GLY THR ILE ASN ASP MET SEQRES 29 A 424 LYS ARG TYR TYR ASN ASN GLN GLN ASN HIS SER MET LYS SEQRES 30 A 424 HIS VAL LYS PRO SER CYS ILE ASN MET MET GLU LYS GLY SEQRES 31 A 424 PRO ASN LEU GLN VAL LYS LYS LYS ILE PRO ASP LYS GLN SEQRES 32 A 424 GLU GLN MET SER ASN ASP ASP PHE ARG LYS MET PHE LEU SEQRES 33 A 424 GLY GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 95 MET LEU PHE PHE SER PHE PHE LYS THR LEU VAL ASP GLN SEQRES 2 B 95 GLU VAL VAL VAL GLU LEU LYS ASN ASP ILE GLU ILE LYS SEQRES 3 B 95 GLY THR LEU GLN SER VAL ASP GLN PHE LEU ASN LEU LYS SEQRES 4 B 95 LEU ASP ASN ILE SER CYS THR ASP GLU LYS LYS TYR PRO SEQRES 5 B 95 HIS LEU GLY SER VAL ARG ASN ILE PHE ILE ARG GLY SER SEQRES 6 B 95 THR VAL ARG TYR VAL TYR LEU ASN LYS ASN MET VAL ASP SEQRES 7 B 95 THR ASN LEU LEU GLN ASP ALA THR ARG ARG GLU VAL MET SEQRES 8 B 95 THR GLU ARG LYS SEQRES 1 C 97 MET GLU THR PRO LEU ASP LEU LEU LYS LEU ASN LEU ASP SEQRES 2 C 97 GLU ARG VAL TYR ILE LYS LEU ARG GLY ALA ARG THR LEU SEQRES 3 C 97 VAL GLY THR LEU GLN ALA PHE ASP SER HIS CYS ASN ILE SEQRES 4 C 97 VAL LEU SER ASP ALA VAL GLU THR ILE TYR GLN LEU ASN SEQRES 5 C 97 ASN GLU GLU LEU SER GLU SER GLU ARG ARG CYS GLU MET SEQRES 6 C 97 VAL PHE ILE ARG GLY ASP THR VAL THR LEU ILE SER THR SEQRES 7 C 97 PRO SER GLU ASP ASP ASP GLY ALA VAL GLU ILE TRP SER SEQRES 8 C 97 HIS PRO GLN PHE GLU LYS SEQRES 1 D 93 MET LEU PRO LEU TYR LEU LEU THR ASN ALA LYS GLY GLN SEQRES 2 D 93 GLN MET GLN ILE GLU LEU LYS ASN GLY GLU ILE ILE GLN SEQRES 3 D 93 GLY ILE LEU THR ASN VAL ASP ASN TRP MET ASN LEU THR SEQRES 4 D 93 LEU SER ASN VAL THR GLU TYR SER GLU GLU SER ALA ILE SEQRES 5 D 93 ASN SER GLU ASP ASN ALA GLU SER SER LYS ALA VAL LYS SEQRES 6 D 93 LEU ASN GLU ILE TYR ILE ARG GLY THR PHE ILE LYS PHE SEQRES 7 D 93 ILE LYS LEU GLN ASP ASN ILE ILE ASP LYS VAL LYS GLN SEQRES 8 D 93 GLN ILE SEQRES 1 E 93 MET SER LEU PRO GLU ILE LEU PRO LEU GLU VAL ILE ASP SEQRES 2 E 93 LYS THR ILE ASN GLN LYS VAL LEU ILE VAL LEU GLN SER SEQRES 3 E 93 ASN ARG GLU PHE GLU GLY THR LEU VAL GLY PHE ASP ASP SEQRES 4 E 93 PHE VAL ASN VAL ILE LEU GLU ASP ALA VAL GLU TRP LEU SEQRES 5 E 93 ILE ASP PRO GLU ASP GLU SER ARG ASN GLU LYS VAL MET SEQRES 6 E 93 GLN HIS HIS GLY ARG MET LEU LEU SER GLY ASN ASN ILE SEQRES 7 E 93 ALA ILE LEU VAL PRO GLY GLY LYS LYS THR PRO THR GLU SEQRES 8 E 93 ALA LEU SEQRES 1 F 88 GLY SER MET SER GLY LYS ALA SER THR GLU GLY SER VAL SEQRES 2 F 88 THR THR GLU PHE LEU SER ASP ILE ILE GLY LYS THR VAL SEQRES 3 F 88 ASN VAL LYS LEU ALA SER GLY LEU LEU TYR SER GLY ARG SEQRES 4 F 88 LEU GLU SER ILE ASP GLY PHE MET ASN VAL ALA LEU SER SEQRES 5 F 88 SER ALA THR GLU HIS TYR GLU SER ASN ASN ASN LYS LEU SEQRES 6 F 88 LEU ASN LYS PHE ASN SER ASP VAL PHE LEU ARG GLY THR SEQRES 7 F 88 GLN VAL MET TYR ILE SER GLU GLN LYS ILE SEQRES 1 G 115 MET HIS GLN GLN HIS SER LYS SER GLU ASN LYS PRO GLN SEQRES 2 G 115 GLN GLN ARG LYS LYS PHE GLU GLY PRO LYS ARG GLU ALA SEQRES 3 G 115 ILE LEU ASP LEU ALA LYS TYR LYS ASP SER LYS ILE ARG SEQRES 4 G 115 VAL LYS LEU MET GLY GLY LYS LEU VAL ILE GLY VAL LEU SEQRES 5 G 115 LYS GLY TYR ASP GLN LEU MET ASN LEU VAL LEU ASP ASP SEQRES 6 G 115 THR VAL GLU TYR MET SER ASN PRO ASP ASP GLU ASN ASN SEQRES 7 G 115 THR GLU LEU ILE SER LYS ASN ALA ARG LYS LEU GLY LEU SEQRES 8 G 115 THR VAL ILE ARG GLY THR ILE LEU VAL SER LEU SER SER SEQRES 9 G 115 ALA GLU GLY SER ASP VAL LEU TYR MET GLN LYS SEQRES 1 H 115 MET SER ALA THR LEU LYS ASP TYR LEU ASN LYS ARG VAL SEQRES 2 H 115 VAL ILE ILE LYS VAL ASP GLY GLU CYS LEU ILE ALA SER SEQRES 3 H 115 LEU ASN GLY PHE ASP LYS ASN THR ASN LEU PHE ILE THR SEQRES 4 H 115 ASN VAL PHE ASN ARG ILE SER LYS GLU PHE ILE CYS LYS SEQRES 5 H 115 ALA GLN LEU LEU ARG GLY SER GLU ILE ALA LEU VAL GLY SEQRES 6 H 115 LEU ILE ASP ALA GLU ASN ASP ASP SER LEU ALA PRO ILE SEQRES 7 H 115 ASP GLU LYS LYS VAL PRO MET LEU LYS ASP THR LYS ASN SEQRES 8 H 115 LYS ILE GLU ASN GLU HIS VAL ILE TRP GLU LYS VAL TYR SEQRES 9 H 115 GLU SER LYS THR LYS HIS HIS HIS HIS HIS HIS SEQRES 1 I 84 G G U C A A U U U G A A A SEQRES 2 I 84 C A A U A C A G A G A U G SEQRES 3 I 84 A U C A G C G G U U C C C SEQRES 4 I 84 C U G C A U A A G G G U G SEQRES 5 I 84 A A C C G U U U U A C A A SEQRES 6 I 84 A G A G A U U U A U U U C SEQRES 7 I 84 G U U U U UBD MODRES 6ASO UBD I 113 U MODIFIED RESIDUE HET UBD I 113 24 HET K A 501 1 HET MN I 201 1 HET K I 202 1 HET MG I 203 1 HET MG I 204 1 HETNAM UBD URIDINE 3',5'-BIS(DIHYDROGEN PHOSPHATE) HETNAM K POTASSIUM ION HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION FORMUL 9 UBD C9 H14 N2 O12 P2 FORMUL 10 K 2(K 1+) FORMUL 11 MN MN 2+ FORMUL 13 MG 2(MG 2+) FORMUL 15 HOH *134(H2 O) HELIX 1 AA1 GLU A 32 THR A 41 1 10 HELIX 2 AA2 ASN A 53 LYS A 62 1 10 HELIX 3 AA3 HIS A 63 GLY A 65 5 3 HELIX 4 AA4 ARG A 89 THR A 98 1 10 HELIX 5 AA5 THR A 129 ILE A 140 1 12 HELIX 6 AA6 SER A 167 ASN A 179 1 13 HELIX 7 AA7 ASN A 194 LYS A 198 5 5 HELIX 8 AA8 ASP A 203 GLU A 208 1 6 HELIX 9 AA9 SER A 218 LEU A 222 5 5 HELIX 10 AB1 ASP A 223 GLU A 232 1 10 HELIX 11 AB2 GLY A 233 GLY A 235 5 3 HELIX 12 AB3 ASN A 262 LEU A 270 1 9 HELIX 13 AB4 GLN A 271 ASN A 273 5 3 HELIX 14 AB5 LYS A 289 SER A 304 1 16 HELIX 15 AB6 GLU A 309 GLU A 311 5 3 HELIX 16 AB7 SER A 324 GLU A 335 1 12 HELIX 17 AB8 ASN A 339 LYS A 341 5 3 HELIX 18 AB9 SER A 350 ASN A 353 5 4 HELIX 19 AC1 ASP A 361 ASN A 373 1 13 HELIX 20 AC2 THR A 386 GLN A 398 1 13 HELIX 21 AC3 LEU B 2 LEU B 10 1 9 HELIX 22 AC4 ASN B 73 VAL B 77 5 5 HELIX 23 AC5 ASP B 78 THR B 92 1 15 HELIX 24 AC6 THR C 3 LEU C 10 1 8 HELIX 25 AC7 PRO D 3 ASN D 9 1 7 HELIX 26 AC8 PRO E 8 LYS E 14 1 7 HELIX 27 AC9 VAL F 11 ASP F 18 1 8 HELIX 28 AD1 ASP G 29 LYS G 34 5 6 HELIX 29 AD2 GLU H 96 LYS H 107 1 12 SHEET 1 AA1 4 ILE A 67 ASP A 74 0 SHEET 2 AA1 4 ARG A 81 PHE A 87 -1 O GLU A 86 N HIS A 69 SHEET 3 AA1 4 THR A 42 LEU A 48 -1 N VAL A 43 O ILE A 85 SHEET 4 AA1 4 ILE A 110 HIS A 113 -1 O SER A 112 N LEU A 44 SHEET 1 AA2 2 VAL A 103 VAL A 104 0 SHEET 2 AA2 2 ASN A 107 GLU A 108 -1 O ASN A 107 N VAL A 104 SHEET 1 AA3 4 ALA A 144 ARG A 148 0 SHEET 2 AA3 4 PHE A 160 VAL A 165 -1 O TYR A 162 N ARG A 148 SHEET 3 AA3 4 THR A 118 THR A 122 -1 N LEU A 119 O ILE A 163 SHEET 4 AA3 4 VAL A 189 VAL A 192 -1 O LYS A 191 N TRP A 120 SHEET 1 AA4 2 LYS A 182 ILE A 183 0 SHEET 2 AA4 2 TYR A 186 THR A 187 -1 O TYR A 186 N ILE A 183 SHEET 1 AA5 4 ILE A 237 ASN A 241 0 SHEET 2 AA5 4 CYS A 254 PHE A 260 -1 O VAL A 259 N LYS A 239 SHEET 3 AA5 4 GLU A 211 LEU A 217 -1 N ILE A 214 O ALA A 256 SHEET 4 AA5 4 SER A 283 LEU A 286 -1 O SER A 283 N ARG A 215 SHEET 1 AA6 2 LEU A 276 LEU A 277 0 SHEET 2 AA6 2 ARG A 280 GLU A 281 -1 O ARG A 280 N LEU A 277 SHEET 1 AA7 4 ILE A 343 VAL A 349 0 SHEET 2 AA7 4 GLY A 354 PHE A 359 -1 O ILE A 358 N LYS A 345 SHEET 3 AA7 4 LEU A 313 PHE A 317 -1 N ILE A 314 O ILE A 357 SHEET 4 AA7 4 ARG A 383 GLY A 385 -1 O ARG A 383 N PHE A 317 SHEET 1 AA8 2 GLN A 376 PHE A 377 0 SHEET 2 AA8 2 LYS A 380 VAL A 381 -1 O LYS A 380 N PHE A 377 SHEET 1 AA918 PHE H 49 CYS H 51 0 SHEET 2 AA918 LEU H 36 PHE H 42 -1 N VAL H 41 O CYS H 51 SHEET 3 AA918 GLN H 54 LEU H 56 -1 O GLN H 54 N ILE H 38 SHEET 4 AA918 ILE D 76 LYS D 80 -1 N ILE D 79 O LEU H 55 SHEET 5 AA918 GLN D 14 LEU D 19 -1 N GLU D 18 O LYS D 77 SHEET 6 AA918 ILE D 24 VAL D 32 -1 O GLY D 27 N MET D 15 SHEET 7 AA918 LEU D 38 SER D 41 -1 O THR D 39 N THR D 30 SHEET 8 AA918 TYR D 70 ILE D 71 -1 O ILE D 71 N LEU D 38 SHEET 9 AA918 LEU G 99 SER G 104 -1 O LEU G 102 N TYR D 70 SHEET 10 AA918 LYS G 37 LEU G 42 -1 N LYS G 41 O VAL G 100 SHEET 11 AA918 LEU G 47 TYR G 55 -1 O VAL G 48 N VAL G 40 SHEET 12 AA918 LEU G 61 TYR G 69 -1 O VAL G 62 N LYS G 53 SHEET 13 AA918 ALA G 86 ILE G 94 -1 O ARG G 87 N GLU G 68 SHEET 14 AA918 ILE E 78 PRO E 83 -1 N LEU E 81 O VAL G 93 SHEET 15 AA918 LYS E 19 LEU E 24 -1 N VAL E 23 O ILE E 80 SHEET 16 AA918 ARG E 28 PHE E 37 -1 O GLY E 32 N VAL E 20 SHEET 17 AA918 VAL E 43 LEU E 52 -1 O ILE E 44 N VAL E 35 SHEET 18 AA918 GLU E 62 GLN E 66 -1 O MET E 65 N GLU E 50 SHEET 1 AB118 LEU F 63 LYS F 66 0 SHEET 2 AB118 VAL F 47 TYR F 56 -1 N GLU F 54 O LEU F 64 SHEET 3 AB118 VAL F 71 LEU F 73 -1 O VAL F 71 N LEU F 49 SHEET 4 AB118 VAL C 73 SER C 77 -1 N ILE C 76 O PHE F 72 SHEET 5 AB118 ARG C 15 LEU C 20 -1 N LYS C 19 O THR C 74 SHEET 6 AB118 ARG C 24 PHE C 33 -1 O GLY C 28 N VAL C 16 SHEET 7 AB118 ILE C 39 GLN C 50 -1 O SER C 42 N THR C 29 SHEET 8 AB118 SER C 57 ILE C 68 -1 O GLU C 64 N ASP C 43 SHEET 9 AB118 VAL B 67 LEU B 72 -1 N LEU B 72 O MET C 65 SHEET 10 AB118 GLU B 14 LEU B 19 -1 N VAL B 16 O TYR B 71 SHEET 11 AB118 GLU B 24 VAL B 32 -1 O ILE B 25 N VAL B 17 SHEET 12 AB118 LEU B 38 CYS B 45 -1 O SER B 44 N LYS B 26 SHEET 13 AB118 ASN B 59 ILE B 62 -1 O ILE B 60 N LEU B 40 SHEET 14 AB118 ILE H 61 VAL H 64 -1 O VAL H 64 N PHE B 61 SHEET 15 AB118 ARG H 12 LYS H 17 -1 N ILE H 16 O LEU H 63 SHEET 16 AB118 CYS H 22 GLY H 29 -1 O LEU H 23 N ILE H 15 SHEET 17 AB118 LEU H 36 PHE H 42 -1 O PHE H 42 N ILE H 24 SHEET 18 AB118 PHE H 49 CYS H 51 -1 O CYS H 51 N VAL H 41 SHEET 1 AB2 8 LEU F 63 LYS F 66 0 SHEET 2 AB2 8 VAL F 47 TYR F 56 -1 N GLU F 54 O LEU F 64 SHEET 3 AB2 8 LEU F 32 ILE F 41 -1 N LEU F 33 O HIS F 55 SHEET 4 AB2 8 THR F 23 LEU F 28 -1 N VAL F 24 O GLY F 36 SHEET 5 AB2 8 VAL F 78 GLU F 83 -1 O SER F 82 N ASN F 25 SHEET 6 AB2 8 ARG E 70 LEU E 73 -1 N LEU E 72 O ILE F 81 SHEET 7 AB2 8 VAL E 43 LEU E 52 -1 N VAL E 43 O LEU E 73 SHEET 8 AB2 8 GLU E 62 GLN E 66 -1 O MET E 65 N GLU E 50 LINK O3' U I 112 P1 UBD I 113 1555 1555 1.62 LINK OD2 ASP A 74 MG MG I 203 1555 2555 2.44 LINK O3' A I 40 MG MG I 204 1555 1555 2.69 LINK O2' A I 40 MG MG I 204 1555 1555 2.86 LINK OP2 A I 41 MG MG I 204 1555 1555 2.61 LINK O6 G I 60 K K I 202 1555 1555 3.04 LINK OP2 U I 74 MG MG I 203 1555 1555 2.47 LINK OP2 A I 75 MG MG I 203 1555 1555 2.31 LINK O6 G I 86 K K I 202 1555 1555 3.09 LINK O4 U I 87 K K I 202 1555 1555 2.87 CISPEP 1 PHE A 317 PRO A 318 0 -9.44 SITE 1 AC1 2 A I 44 U I 46 SITE 1 AC2 4 A I 59 G I 60 G I 86 U I 87 SITE 1 AC3 2 U I 74 A I 75 SITE 1 AC4 2 A I 40 A I 41 CRYST1 94.197 77.390 118.614 90.00 105.91 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010616 0.000000 0.003026 0.00000 SCALE2 0.000000 0.012922 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008767 0.00000