PDB Short entry for 6BGH
HEADER    TRANSCRIPTION                           28-OCT-17   6BGH              
TITLE     SOLUTION NMR STRUCTURE OF BRD3 ET DOMAIN BOUND TO BRG1 PEPTIDE        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 3;                          
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: RING3-LIKE PROTEIN;                                         
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: BRD3_ET;                                                   
COMPND   8 CHAIN: B;                                                            
COMPND   9 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: BRD3, KIAA0043, RING3L;                                        
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  10 ORGANISM_TAXID: 9606;                                                
SOURCE  11 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  12 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    TRANSCRIPTION BROMODOMAIN BET PROTEIN, TRANSCRIPTION                  
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    T.N.SZYSZKA,D.C.WAI,J.P.MACKAY                                        
REVDAT   1   21-MAR-18 6BGH    0                                                
JRNL        AUTH   T.N.SZYSZKA,D.C.WAI,J.P.MACKAY                               
JRNL        TITL   SOLUTION NMR STRUCTURE OF BRD3 ET DOMAIN BOUND TO BRG1       
JRNL        TITL 2 PEPTIDE                                                      
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER A. T. ET.AL.                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 6BGH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-17.                  
REMARK 100 THE DEPOSITION ID IS D_1000230643.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298; 298; 298                      
REMARK 210  PH                             : 7; 7; 7                            
REMARK 210  IONIC STRENGTH                 : 50 NACL; 50 NACL; 50 NACL          
REMARK 210  PRESSURE                       : 1 ATM; 1 ATM; 1 ATM                
REMARK 210  SAMPLE CONTENTS                : 300 UM BRD3_ET, 600 UM BRG1,       
REMARK 210                                   0.02 % ROCHE COMPLETE PROTEASE     
REMARK 210                                   INHIBITOR, 166 UM DSS, 90% H2O/    
REMARK 210                                   10% D2O; 300 UM [U-15N] BRD3_ET,   
REMARK 210                                   600 UM BRG1, 0.02 % ROCHE          
REMARK 210                                   COMPLETE PROTEASE INHIBITOR, 166   
REMARK 210                                   UM DSS, 90% H2O/10% D2O; 300 UM    
REMARK 210                                   [U-13C; U-15N] BRD3_ET, 600 UM     
REMARK 210                                   BRG1, 0.02 % ROCHE COMPLETE        
REMARK 210                                   PROTEASE INHIBITOR, 166 UM DSS,    
REMARK 210                                   90% H2O/10% D2O                    
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-13C HSQC; 3D 1H-13C NOESY;   
REMARK 210                                   3D 1H-15N NOESY; 3D 13C/15N (F2/   
REMARK 210                                   F1) FILTERED, 1H-1H NOESY; 2D      
REMARK 210                                   13C/15N (F2/F1) FILTERED, 1H-1H    
REMARK 210                                   NOESY; 2D 13C/15N (F2/F1)          
REMARK 210                                   FILTERED, 1H-1H TOCSY; 3D HCCH-    
REMARK 210                                   TOCSY; 3D HCCH-COSY; 2D 1H-1H      
REMARK 210                                   TOCSY; 2D 1H-1H NOESY; 3D HNCO;    
REMARK 210                                   2D 1H-15N HSQC; 3D HN(CA)CO; 3D    
REMARK 210                                   H(CC)(CO)HN; 3D HNCA; 3D CBCA(CO)  
REMARK 210                                   NH; 3D HNCACB                      
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ; 800 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCEIII                          
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 1000                               
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500 11 PRO A 611   N   -  CD  -  CG  ANGL. DEV. =  -9.7 DEGREES          
REMARK 500 17 PRO A 611   C   -  N   -  CA  ANGL. DEV. =  12.0 DEGREES          
REMARK 500 17 PRO A 611   CA  -  N   -  CD  ANGL. DEV. =  -8.8 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ASP A 562     -167.18   -176.51                                   
REMARK 500  1 SER A 563      -38.58   -145.23                                   
REMARK 500  1 GLU A 564       91.59     47.07                                   
REMARK 500  1 ARG A 602      -60.97    -97.82                                   
REMARK 500  1 LEU A 606      -78.04    -37.19                                   
REMARK 500  1 ASP A 608      -47.08   -150.67                                   
REMARK 500  1 SER A 609      -44.71    164.98                                   
REMARK 500  1 ASP A 617       -1.31    -59.80                                   
REMARK 500  1 SER B1592      -83.64   -148.69                                   
REMARK 500  1 LYS B1596       84.14    -64.69                                   
REMARK 500  1 LYS B1598       72.50     48.31                                   
REMARK 500  1 LEU B1599      107.20    -52.46                                   
REMARK 500  2 TYR A 561       87.29     53.35                                   
REMARK 500  2 GLU A 568      177.79     54.85                                   
REMARK 500  2 PRO A 611       -2.95    -53.68                                   
REMARK 500  2 ASP A 617       -0.12    -50.19                                   
REMARK 500  2 PHE A 618      -19.10    -47.80                                   
REMARK 500  2 VAL B1593     -162.14   -117.79                                   
REMARK 500  2 LYS B1594      135.43     82.59                                   
REMARK 500  2 ILE B1597      -81.63     41.10                                   
REMARK 500  2 LYS B1598       76.54     45.67                                   
REMARK 500  2 ARG B1601      -67.05     70.67                                   
REMARK 500  3 SER A 563      -36.51   -131.69                                   
REMARK 500  3 GLU A 564     -170.81     65.33                                   
REMARK 500  3 ILE A 616       79.04   -114.99                                   
REMARK 500  3 ASP A 617       -1.45    -51.64                                   
REMARK 500  3 PHE A 618      -18.16    -47.33                                   
REMARK 500  3 LYS B1596      104.40    -47.94                                   
REMARK 500  3 LYS B1598       78.35     52.73                                   
REMARK 500  4 LYS A 639       83.09     44.85                                   
REMARK 500  4 LYS B1596       81.83    -68.57                                   
REMARK 500  4 LYS B1598       91.87     57.47                                   
REMARK 500  5 TYR A 561      119.84     65.82                                   
REMARK 500  5 GLU A 564      168.52     55.62                                   
REMARK 500  5 LEU A 606      -77.57    -41.34                                   
REMARK 500  5 ASP A 608      -48.70   -153.58                                   
REMARK 500  5 SER A 609      -79.61    153.23                                   
REMARK 500  5 ASP A 612      -51.59   -120.46                                   
REMARK 500  5 GLU A 613      -45.97    152.01                                   
REMARK 500  5 PHE A 618       10.03    -49.80                                   
REMARK 500  5 LYS A 639      111.07     81.60                                   
REMARK 500  5 LYS A 640       33.94    -96.56                                   
REMARK 500  5 LYS B1594      117.09     68.97                                   
REMARK 500  5 LYS B1596      101.74    -52.03                                   
REMARK 500  5 ILE B1597      -74.75    -76.20                                   
REMARK 500  5 LYS B1598       73.10     51.87                                   
REMARK 500  6 TYR A 561      -82.70     59.31                                   
REMARK 500  6 SER A 563       30.69   -142.50                                   
REMARK 500  6 GLU A 564       92.64     49.86                                   
REMARK 500  6 GLU A 567     -149.82    -99.40                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     185 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1 ARG A 607         0.08    SIDE CHAIN                              
REMARK 500  1 ARG A 631         0.09    SIDE CHAIN                              
REMARK 500  4 ARG A 627         0.08    SIDE CHAIN                              
REMARK 500  6 ARG A 631         0.08    SIDE CHAIN                              
REMARK 500 10 ARG A 578         0.08    SIDE CHAIN                              
REMARK 500 10 ARG A 602         0.08    SIDE CHAIN                              
REMARK 500 10 ARG A 631         0.07    SIDE CHAIN                              
REMARK 500 11 ARG A 586         0.09    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 30368   RELATED DB: BMRB                                 
REMARK 900 SOLUTION NMR STRUCTURE OF BRD3 ET DOMAIN BOUND TO BRG1 PEPTIDE       
DBREF  6BGH A  557   643  UNP    Q15059   BRD3_HUMAN     557    643             
DBREF  6BGH B 1591  1602  PDB    6BGH     6BGH          1591   1602             
SEQRES   1 A   87  ALA SER ALA SER TYR ASP SER GLU GLU GLU GLU GLU GLY          
SEQRES   2 A   87  LEU PRO MET SER TYR ASP GLU LYS ARG GLN LEU SER LEU          
SEQRES   3 A   87  ASP ILE ASN ARG LEU PRO GLY GLU LYS LEU GLY ARG VAL          
SEQRES   4 A   87  VAL HIS ILE ILE GLN SER ARG GLU PRO SER LEU ARG ASP          
SEQRES   5 A   87  SER ASN PRO ASP GLU ILE GLU ILE ASP PHE GLU THR LEU          
SEQRES   6 A   87  LYS PRO THR THR LEU ARG GLU LEU GLU ARG TYR VAL LYS          
SEQRES   7 A   87  SER CYS LEU GLN LYS LYS GLN ARG LYS                          
SEQRES   1 B   12  ARG SER VAL LYS VAL LYS ILE LYS LEU GLY ARG LYS              
HELIX    1 AA1 ALA A  557  ASP A  562  1                                   6    
HELIX    2 AA2 SER A  573  LEU A  587  1                                  15    
HELIX    3 AA3 PRO A  588  GLN A  600  1                                  13    
HELIX    4 AA4 LYS A  622  LYS A  639  1                                  18    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000