PDB Short entry for 6CDS HEADER SIGNALING PROTEIN 09-FEB-18 6CDS TITLE HUMAN NEUROFIBROMIN 2/MERLIN/SCHWANNOMIN RESIDUES 1-339 IN COMPLEX TITLE 2 WITH PIP2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MERLIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MOESIN-EZRIN-RADIXIN-LIKE PROTEIN,NEUROFIBROMIN-2, COMPND 5 SCHWANNOMERLIN,SCHWANNOMIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NF2, SCH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P1 KEYWDS NEUROFIBROMIN 2, SCHWANNOMIN, MERLIN, TUMOR SUPPRESSOR PROTEIN, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.CHINTHALAPUDI,A.J.SHARFF,G.BRICOGNE,T.IZARD REVDAT 4 04-OCT-23 6CDS 1 REMARK REVDAT 3 18-DEC-19 6CDS 1 REMARK REVDAT 2 20-FEB-19 6CDS 1 REMARK REVDAT 1 18-JUL-18 6CDS 0 JRNL AUTH K.CHINTHALAPUDI,V.MANDATI,J.ZHENG,A.J.SHARFF,G.BRICOGNE, JRNL AUTH 2 P.R.GRIFFIN,J.KISSIL,T.IZARD JRNL TITL LIPID BINDING PROMOTES THE OPEN CONFORMATION AND JRNL TITL 2 TUMOR-SUPPRESSIVE ACTIVITY OF NEUROFIBROMIN 2. JRNL REF NAT COMMUN V. 9 1338 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29626191 JRNL DOI 10.1038/S41467-018-03648-4 REMARK 2 REMARK 2 RESOLUTION. 2.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.13.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 74.8 REMARK 3 NUMBER OF REFLECTIONS : 19196 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 962 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 7.23 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 269 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2746 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 250 REMARK 3 BIN R VALUE (WORKING SET) : 0.2658 REMARK 3 BIN FREE R VALUE : 0.4045 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.06 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5395 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 222 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.89100 REMARK 3 B22 (A**2) : -4.30370 REMARK 3 B33 (A**2) : 5.19470 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00670 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.350 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.367 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.880 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 11037 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 19970 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2506 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1685 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 11037 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 705 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 11748 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.06 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.27 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: DOMAIN1 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6007 57.7988 54.3115 REMARK 3 T TENSOR REMARK 3 T11: -0.0758 T22: -0.1351 REMARK 3 T33: 0.0766 T12: 0.0504 REMARK 3 T13: 0.0179 T23: -0.0384 REMARK 3 L TENSOR REMARK 3 L11: 1.3810 L22: 4.1356 REMARK 3 L33: 0.9720 L12: 1.0293 REMARK 3 L13: 1.2925 L23: 1.6663 REMARK 3 S TENSOR REMARK 3 S11: 0.0355 S12: 0.0871 S13: -0.1997 REMARK 3 S21: 0.1294 S22: 0.1196 S23: -0.3620 REMARK 3 S31: -0.1462 S32: -0.0597 S33: -0.1551 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: DOMAIN2 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6096 45.2582 34.0631 REMARK 3 T TENSOR REMARK 3 T11: -0.0124 T22: -0.0657 REMARK 3 T33: 0.0543 T12: 0.0739 REMARK 3 T13: -0.0770 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.1898 L22: 2.1037 REMARK 3 L33: 0.1987 L12: -0.9102 REMARK 3 L13: -0.5944 L23: 0.9868 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: -0.0992 S13: 0.0466 REMARK 3 S21: -0.3510 S22: -0.0913 S23: 0.1400 REMARK 3 S31: -0.0469 S32: -0.2824 S33: 0.0351 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: DOMAIN3 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9296 28.0358 56.4705 REMARK 3 T TENSOR REMARK 3 T11: -0.0812 T22: -0.0629 REMARK 3 T33: 0.1308 T12: 0.0257 REMARK 3 T13: 0.0489 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: -0.0695 L22: 1.1764 REMARK 3 L33: 0.1015 L12: 0.0870 REMARK 3 L13: 0.2035 L23: -0.0823 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.0287 S13: -0.1224 REMARK 3 S21: 0.1103 S22: 0.1118 S23: -0.2653 REMARK 3 S31: 0.3161 S32: 0.2048 S33: -0.1364 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: DOMAIN4 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1222 41.7355 65.2907 REMARK 3 T TENSOR REMARK 3 T11: -0.1673 T22: 0.0904 REMARK 3 T33: 0.0694 T12: 0.0004 REMARK 3 T13: 0.0461 T23: -0.0814 REMARK 3 L TENSOR REMARK 3 L11: 0.2784 L22: 0.1624 REMARK 3 L33: 0.2487 L12: 0.1762 REMARK 3 L13: -0.8598 L23: 0.1030 REMARK 3 S TENSOR REMARK 3 S11: 0.0578 S12: -0.1657 S13: -0.0123 REMARK 3 S21: 0.0295 S22: -0.0663 S23: -0.0460 REMARK 3 S31: -0.1413 S32: -0.0284 S33: 0.0085 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: DOMAIN5 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0374 6.0066 -2.2262 REMARK 3 T TENSOR REMARK 3 T11: -0.1098 T22: -0.1670 REMARK 3 T33: 0.1503 T12: -0.0387 REMARK 3 T13: 0.0110 T23: -0.0274 REMARK 3 L TENSOR REMARK 3 L11: 1.8271 L22: 3.7919 REMARK 3 L33: 1.2662 L12: -2.1225 REMARK 3 L13: -0.5629 L23: 0.8503 REMARK 3 S TENSOR REMARK 3 S11: 0.0223 S12: -0.0093 S13: 0.0717 REMARK 3 S21: -0.1424 S22: 0.0634 S23: -0.4911 REMARK 3 S31: -0.0015 S32: -0.1174 S33: -0.0857 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: DOMAIN6 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8731 18.5787 17.7420 REMARK 3 T TENSOR REMARK 3 T11: 0.0269 T22: -0.1399 REMARK 3 T33: 0.0478 T12: -0.0395 REMARK 3 T13: 0.0326 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.4650 L22: 0.6993 REMARK 3 L33: 2.3166 L12: 0.3742 REMARK 3 L13: -0.1590 L23: 1.4480 REMARK 3 S TENSOR REMARK 3 S11: -0.1464 S12: 0.1329 S13: -0.0227 REMARK 3 S21: 0.2715 S22: -0.0178 S23: 0.1040 REMARK 3 S31: 0.1407 S32: -0.1309 S33: 0.1641 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: DOMAIN7 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2081 35.6451 -4.2806 REMARK 3 T TENSOR REMARK 3 T11: -0.1139 T22: -0.0643 REMARK 3 T33: 0.1236 T12: -0.0561 REMARK 3 T13: -0.0658 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: -0.1249 L22: 1.3377 REMARK 3 L33: 0.4831 L12: -0.1176 REMARK 3 L13: 0.7369 L23: -0.0121 REMARK 3 S TENSOR REMARK 3 S11: -0.0540 S12: 0.2138 S13: -0.0420 REMARK 3 S21: 0.0908 S22: 0.0548 S23: -0.3761 REMARK 3 S31: -0.2496 S32: 0.1243 S33: -0.0008 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: DOMAIN8 REMARK 3 ORIGIN FOR THE GROUP (A): 1.9011 22.3883 -13.3776 REMARK 3 T TENSOR REMARK 3 T11: -0.1155 T22: 0.0659 REMARK 3 T33: 0.0464 T12: -0.0007 REMARK 3 T13: -0.0193 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.4130 L22: 0.0886 REMARK 3 L33: 0.0518 L12: -0.2494 REMARK 3 L13: 0.1917 L23: 0.4664 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: 0.3157 S13: 0.0140 REMARK 3 S21: -0.0169 S22: -0.0950 S23: -0.0984 REMARK 3 S31: 0.0271 S32: 0.0083 S33: 0.0710 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE RESIDUE RANGES FOR EACH OF THE 8 TLS DOMAINS ARE AS FOLLOWS: REMARK 3 TLS DOMAIN 1: A15 - A103 AND A804, A810, A813, A814, A820, A825, REMARK 3 A829, A831, A832, A834, A835, A1004, A1005, A1017, A1020, A1023, REMARK 3 A1027, A1032, A1038, A1039, A1042, A1050, A1053, A1058, A1060, REMARK 3 A1062, A1067, A1068, A1071, A1072 REMARK 3 TLS DOMAINS 2: A104 - A219 AND A656, A803, A806, A807, A809, A815, REMARK 3 A816, A818, A821, A823, A830, A838, A839, A840, A1002, A1003, REMARK 3 A1006, A1007, A1009, A1025, A1029, A1030, A1031, A1033, A1034, REMARK 3 A1035, A1037, A1046, A1048, B1049, A1051, A1054, A1059, A1063 REMARK 3 TLS DOMAIN 3: A220 - A290 AND A801, A805, A811, A812, A817, A822, REMARK 3 A827, A833, A836, A837, A1010, A1011, A1013, A1021, A1024, A1026, REMARK 3 A1028, A1040, A1041, A1047, A1052, A1055, A1057, A1061, A1064, REMARK 3 A1065, A1066, A1070 REMARK 3 TLS DOMAIN 4: A291 - A339 AND A500, A690, A802, A808, A819, A824, REMARK 3 A826, A828, A1001, A1008, A1012, A1022, A1036, A1043, A1044, A1045, REMARK 3 A1056, A1069 REMARK 3 TLS DOMAIN 5: B15 - B103 AND A804, B810, B813, B814, B820, B825, REMARK 3 B829, B831, B832, B834, B835, B1073, B1075, B1079, B1082, B1084, REMARK 3 B1091, B1092, B1093, B1100, B1101, B1105, B1112, B1120, B1133, REMARK 3 B1134, B1138 REMARK 3 TLS DOMAIN 6: B104 - B219 AND B641, B803, B806, B807, B815, B816, REMARK 3 B818, B821, B823, B830, B834, B838, B839, B1074, B1076, B1080, REMARK 3 B1081, B1083, B1086, B1087, B1088, B1096, B1098, B1104, B1107, REMARK 3 B1110, B1111, B1113, B1114, B1115, B1117, B1118, B1122, B1123, REMARK 3 B1124, B1125, B1127, B1128, B1137, B1139, B1140 REMARK 3 TLS DOMAIN 7: B220 - B290 AND B671, B700, B801, B805, B809, B811, REMARK 3 B812, B817, B822, B827, B833, B836, B837, B8105, B1089, B1090, REMARK 3 B1094, B9105, B1099, B1103, B1108, B1109, B1116, B1129, B1130, REMARK 3 B1131, B1132, B1136, B1142, B1143 REMARK 3 TLS DOMAIN 8: B291 - B339 AND B500, B802, B808, B819, B824, B826, REMARK 3 B828, B1077, B1078, B1097, B1102, B1106, B1119, B1121, B1126, REMARK 3 B1135, B1141 REMARK 4 REMARK 4 6CDS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000231981. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI 111. ROSENBAUM-ROCK DOUBLE REMARK 200 -CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : SAGITALLY FOCUSING 2ND CRYSTAL, REMARK 200 ROSENBAUM-ROCK VERTICAL FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23131 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.710 REMARK 200 RESOLUTION RANGE LOW (A) : 96.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ISN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES (PH 7.5), 50 MM REMARK 280 MGCL2(H2O)6, 35 % PEG 550 MONOMETHYL ETHER, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.29500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 ILE A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 ARG A 8 REMARK 465 MET A 9 REMARK 465 SER A 10 REMARK 465 PHE A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 LEU A 14 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 3 REMARK 465 ALA B 4 REMARK 465 ILE B 5 REMARK 465 ALA B 6 REMARK 465 SER B 7 REMARK 465 ARG B 8 REMARK 465 MET B 9 REMARK 465 SER B 10 REMARK 465 PHE B 11 REMARK 465 SER B 12 REMARK 465 SER B 13 REMARK 465 LEU B 14 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 ARG A 16 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 ASN A 263 CG OD1 ND2 REMARK 470 ASP A 268 CG OD1 OD2 REMARK 470 LYS B 15 CG CD CE NZ REMARK 470 ARG B 16 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 17 CG CD CE NZ REMARK 470 GLN B 18 CG CD OE1 NE2 REMARK 470 ILE B 68 CG1 CG2 CD1 REMARK 470 LYS B 69 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 69 -114.28 60.54 REMARK 500 SER A 267 105.60 -160.29 REMARK 500 LYS B 69 -113.47 60.58 REMARK 500 SER B 267 105.80 -160.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1137 DISTANCE = 6.67 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PIO A 500 REMARK 610 PIO B 500 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PIO A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 656 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 690 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PIO B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 641 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 671 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 700 DBREF 6CDS A 1 339 UNP P35240 MERL_HUMAN 1 339 DBREF 6CDS B 1 339 UNP P35240 MERL_HUMAN 1 339 SEQADV 6CDS GLU A 302 UNP P35240 GLY 302 ENGINEERED MUTATION SEQADV 6CDS GLU B 302 UNP P35240 GLY 302 ENGINEERED MUTATION SEQRES 1 A 339 MET ALA GLY ALA ILE ALA SER ARG MET SER PHE SER SER SEQRES 2 A 339 LEU LYS ARG LYS GLN PRO LYS THR PHE THR VAL ARG ILE SEQRES 3 A 339 VAL THR MET ASP ALA GLU MET GLU PHE ASN CYS GLU MET SEQRES 4 A 339 LYS TRP LYS GLY LYS ASP LEU PHE ASP LEU VAL CYS ARG SEQRES 5 A 339 THR LEU GLY LEU ARG GLU THR TRP PHE PHE GLY LEU GLN SEQRES 6 A 339 TYR THR ILE LYS ASP THR VAL ALA TRP LEU LYS MET ASP SEQRES 7 A 339 LYS LYS VAL LEU ASP HIS ASP VAL SER LYS GLU GLU PRO SEQRES 8 A 339 VAL THR PHE HIS PHE LEU ALA LYS PHE TYR PRO GLU ASN SEQRES 9 A 339 ALA GLU GLU GLU LEU VAL GLN GLU ILE THR GLN HIS LEU SEQRES 10 A 339 PHE PHE LEU GLN VAL LYS LYS GLN ILE LEU ASP GLU LYS SEQRES 11 A 339 ILE TYR CYS PRO PRO GLU ALA SER VAL LEU LEU ALA SER SEQRES 12 A 339 TYR ALA VAL GLN ALA LYS TYR GLY ASP TYR ASP PRO SER SEQRES 13 A 339 VAL HIS LYS ARG GLY PHE LEU ALA GLN GLU GLU LEU LEU SEQRES 14 A 339 PRO LYS ARG VAL ILE ASN LEU TYR GLN MET THR PRO GLU SEQRES 15 A 339 MET TRP GLU GLU ARG ILE THR ALA TRP TYR ALA GLU HIS SEQRES 16 A 339 ARG GLY ARG ALA ARG ASP GLU ALA GLU MET GLU TYR LEU SEQRES 17 A 339 LYS ILE ALA GLN ASP LEU GLU MET TYR GLY VAL ASN TYR SEQRES 18 A 339 PHE ALA ILE ARG ASN LYS LYS GLY THR GLU LEU LEU LEU SEQRES 19 A 339 GLY VAL ASP ALA LEU GLY LEU HIS ILE TYR ASP PRO GLU SEQRES 20 A 339 ASN ARG LEU THR PRO LYS ILE SER PHE PRO TRP ASN GLU SEQRES 21 A 339 ILE ARG ASN ILE SER TYR SER ASP LYS GLU PHE THR ILE SEQRES 22 A 339 LYS PRO LEU ASP LYS LYS ILE ASP VAL PHE LYS PHE ASN SEQRES 23 A 339 SER SER LYS LEU ARG VAL ASN LYS LEU ILE LEU GLN LEU SEQRES 24 A 339 CYS ILE GLU ASN HIS ASP LEU PHE MET ARG ARG ARG LYS SEQRES 25 A 339 ALA ASP SER LEU GLU VAL GLN GLN MET LYS ALA GLN ALA SEQRES 26 A 339 ARG GLU GLU LYS ALA ARG LYS GLN MET GLU ARG GLN ARG SEQRES 27 A 339 LEU SEQRES 1 B 339 MET ALA GLY ALA ILE ALA SER ARG MET SER PHE SER SER SEQRES 2 B 339 LEU LYS ARG LYS GLN PRO LYS THR PHE THR VAL ARG ILE SEQRES 3 B 339 VAL THR MET ASP ALA GLU MET GLU PHE ASN CYS GLU MET SEQRES 4 B 339 LYS TRP LYS GLY LYS ASP LEU PHE ASP LEU VAL CYS ARG SEQRES 5 B 339 THR LEU GLY LEU ARG GLU THR TRP PHE PHE GLY LEU GLN SEQRES 6 B 339 TYR THR ILE LYS ASP THR VAL ALA TRP LEU LYS MET ASP SEQRES 7 B 339 LYS LYS VAL LEU ASP HIS ASP VAL SER LYS GLU GLU PRO SEQRES 8 B 339 VAL THR PHE HIS PHE LEU ALA LYS PHE TYR PRO GLU ASN SEQRES 9 B 339 ALA GLU GLU GLU LEU VAL GLN GLU ILE THR GLN HIS LEU SEQRES 10 B 339 PHE PHE LEU GLN VAL LYS LYS GLN ILE LEU ASP GLU LYS SEQRES 11 B 339 ILE TYR CYS PRO PRO GLU ALA SER VAL LEU LEU ALA SER SEQRES 12 B 339 TYR ALA VAL GLN ALA LYS TYR GLY ASP TYR ASP PRO SER SEQRES 13 B 339 VAL HIS LYS ARG GLY PHE LEU ALA GLN GLU GLU LEU LEU SEQRES 14 B 339 PRO LYS ARG VAL ILE ASN LEU TYR GLN MET THR PRO GLU SEQRES 15 B 339 MET TRP GLU GLU ARG ILE THR ALA TRP TYR ALA GLU HIS SEQRES 16 B 339 ARG GLY ARG ALA ARG ASP GLU ALA GLU MET GLU TYR LEU SEQRES 17 B 339 LYS ILE ALA GLN ASP LEU GLU MET TYR GLY VAL ASN TYR SEQRES 18 B 339 PHE ALA ILE ARG ASN LYS LYS GLY THR GLU LEU LEU LEU SEQRES 19 B 339 GLY VAL ASP ALA LEU GLY LEU HIS ILE TYR ASP PRO GLU SEQRES 20 B 339 ASN ARG LEU THR PRO LYS ILE SER PHE PRO TRP ASN GLU SEQRES 21 B 339 ILE ARG ASN ILE SER TYR SER ASP LYS GLU PHE THR ILE SEQRES 22 B 339 LYS PRO LEU ASP LYS LYS ILE ASP VAL PHE LYS PHE ASN SEQRES 23 B 339 SER SER LYS LEU ARG VAL ASN LYS LEU ILE LEU GLN LEU SEQRES 24 B 339 CYS ILE GLU ASN HIS ASP LEU PHE MET ARG ARG ARG LYS SEQRES 25 B 339 ALA ASP SER LEU GLU VAL GLN GLN MET LYS ALA GLN ALA SEQRES 26 B 339 ARG GLU GLU LYS ALA ARG LYS GLN MET GLU ARG GLN ARG SEQRES 27 B 339 LEU HET PIO A 500 33 HET PO4 A 656 5 HET PEG A 690 7 HET PIO B 500 33 HET PO4 B 641 5 HET GOL B 671 6 HET PEG B 700 7 HETNAM PIO [(2R)-2-OCTANOYLOXY-3-[OXIDANYL-[(1R,2R,3S,4R,5R,6S)-2, HETNAM 2 PIO 3,6-TRIS(OXIDANYL)-4,5-DIPHOSPHONOOXY-CYCLOHEXYL]OXY- HETNAM 3 PIO PHOSPHORYL]OXY-PROPYL] OCTANOATE HETNAM PO4 PHOSPHATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN PIO DIOCTANOYL L-ALPHA-PHOSPHATIDYL-D-MYO-INOSITOL 4,5- HETSYN 2 PIO DIPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 PIO 2(C25 H49 O19 P3) FORMUL 4 PO4 2(O4 P 3-) FORMUL 5 PEG 2(C4 H10 O3) FORMUL 8 GOL C3 H8 O3 FORMUL 10 HOH *222(H2 O) HELIX 1 AA1 LYS A 42 GLY A 55 1 14 HELIX 2 AA2 GLU A 58 TRP A 60 5 3 HELIX 3 AA3 LYS A 80 HIS A 84 5 5 HELIX 4 AA4 ASN A 104 LEU A 109 1 6 HELIX 5 AA5 GLN A 111 ASP A 128 1 18 HELIX 6 AA6 PRO A 134 GLY A 151 1 18 HELIX 7 AA7 PRO A 170 GLN A 178 1 9 HELIX 8 AA8 THR A 180 GLU A 194 1 15 HELIX 9 AA9 ALA A 199 GLN A 212 1 14 HELIX 10 AB1 LYS A 289 ARG A 338 1 50 HELIX 11 AB2 LYS B 42 GLY B 55 1 14 HELIX 12 AB3 GLU B 58 TRP B 60 5 3 HELIX 13 AB4 LYS B 80 HIS B 84 5 5 HELIX 14 AB5 ASN B 104 LEU B 109 1 6 HELIX 15 AB6 GLN B 111 ASP B 128 1 18 HELIX 16 AB7 PRO B 134 GLY B 151 1 18 HELIX 17 AB8 PRO B 170 ASN B 175 1 6 HELIX 18 AB9 GLU B 182 GLU B 194 1 13 HELIX 19 AC1 ALA B 199 GLN B 212 1 14 HELIX 20 AC2 LYS B 289 ARG B 338 1 50 SHEET 1 AA1 5 GLU A 32 GLU A 38 0 SHEET 2 AA1 5 THR A 21 VAL A 27 -1 N ILE A 26 O MET A 33 SHEET 3 AA1 5 VAL A 92 ALA A 98 1 O PHE A 94 N VAL A 27 SHEET 4 AA1 5 PHE A 62 ILE A 68 -1 N GLN A 65 O HIS A 95 SHEET 5 AA1 5 THR A 71 TRP A 74 -1 O ALA A 73 N TYR A 66 SHEET 1 AA2 7 ILE A 254 PRO A 257 0 SHEET 2 AA2 7 GLY A 240 TYR A 244 -1 N LEU A 241 O PHE A 256 SHEET 3 AA2 7 GLU A 231 VAL A 236 -1 N LEU A 233 O TYR A 244 SHEET 4 AA2 7 ASN A 220 ASN A 226 -1 N ILE A 224 O LEU A 232 SHEET 5 AA2 7 PHE A 283 ASN A 286 -1 O ASN A 286 N ARG A 225 SHEET 6 AA2 7 GLU A 270 PRO A 275 -1 N PHE A 271 O PHE A 285 SHEET 7 AA2 7 ILE A 261 TYR A 266 -1 N ARG A 262 O LYS A 274 SHEET 1 AA3 5 GLU B 32 GLU B 38 0 SHEET 2 AA3 5 THR B 21 VAL B 27 -1 N ILE B 26 O MET B 33 SHEET 3 AA3 5 VAL B 92 ALA B 98 1 O PHE B 94 N VAL B 27 SHEET 4 AA3 5 PHE B 62 ILE B 68 -1 N GLN B 65 O HIS B 95 SHEET 5 AA3 5 THR B 71 TRP B 74 -1 O ALA B 73 N TYR B 66 SHEET 1 AA4 7 ILE B 254 PRO B 257 0 SHEET 2 AA4 7 GLY B 240 TYR B 244 -1 N LEU B 241 O PHE B 256 SHEET 3 AA4 7 GLU B 231 ASP B 237 -1 N GLY B 235 O HIS B 242 SHEET 4 AA4 7 ASN B 220 ASN B 226 -1 N ILE B 224 O LEU B 232 SHEET 5 AA4 7 PHE B 283 ASN B 286 -1 O ASN B 286 N ARG B 225 SHEET 6 AA4 7 GLU B 270 PRO B 275 -1 N PHE B 271 O PHE B 285 SHEET 7 AA4 7 ILE B 261 TYR B 266 -1 N ARG B 262 O LYS B 274 CISPEP 1 GLU A 90 PRO A 91 0 -3.60 CISPEP 2 GLU B 90 PRO B 91 0 -3.40 SITE 1 AC1 5 THR A 59 TRP A 60 ARG A 309 ARG A 310 SITE 2 AC1 5 HOH A1069 SITE 1 AC2 6 GLN A 212 LEU A 214 GLU A 215 TYR A 217 SITE 2 AC2 6 HOH A1028 HOH A1051 SITE 1 AC3 5 ILE A 264 HIS A 304 LYS A 329 HOH A1047 SITE 2 AC3 5 HOH A1064 SITE 1 AC4 7 PHE B 47 THR B 59 TRP B 60 LEU B 306 SITE 2 AC4 7 ARG B 309 ARG B 310 HOH B1101 SITE 1 AC5 6 GLN B 212 LEU B 214 GLU B 215 TYR B 217 SITE 2 AC5 6 LEU B 239 HOH B 822 SITE 1 AC6 6 TYR B 101 VAL B 219 ASN B 220 TYR B 221 SITE 2 AC6 6 HOH B1132 HOH B1136 SITE 1 AC7 4 ILE B 264 ILE B 301 LYS B 329 HOH B1129 CRYST1 42.310 96.590 106.450 90.00 99.32 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023635 0.000000 0.003879 0.00000 SCALE2 0.000000 0.010353 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009520 0.00000