PDB Short entry for 6CV8
HEADER    VIRAL PROTEIN                           27-MAR-18   6CV8              
TITLE     HADDOCK STRUCTURE OF THE ROUS SARCOMA VIRUS MATRIX PROTEIN (M-DOMAIN) 
TITLE    2 IN COMPLEX WITH INOSITOL 1,4,5-TRISPHOSPHATE                         
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: MATRIX PROTEIN P19;                                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ROUS SARCOMA VIRUS;                             
SOURCE   3 ORGANISM_COMMON: RSV-PRC;                                            
SOURCE   4 ORGANISM_TAXID: 11888;                                               
SOURCE   5 STRAIN: PRAGUE C;                                                    
SOURCE   6 GENE: GAG-POL;                                                       
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    RSV, ASV, GAG, IP3, VIRAL PROTEIN                                     
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    J.VLACH,J.S.SAAD                                                      
REVDAT   4   06-NOV-19 6CV8    1       REMARK                                   
REVDAT   3   19-DEC-18 6CV8    1       JRNL                                     
REVDAT   2   28-NOV-18 6CV8    1       JRNL                                     
REVDAT   1   24-OCT-18 6CV8    0                                                
JRNL        AUTH   J.VLACH,G.N.EASTEP,R.H.GHANAM,S.M.WATANABE,C.A.CARTER,       
JRNL        AUTH 2 J.S.SAAD                                                     
JRNL        TITL   STRUCTURAL BASIS FOR TARGETING AVIAN SARCOMA VIRUS GAG       
JRNL        TITL 2 POLYPROTEIN TO THE PLASMA MEMBRANE FOR VIRUS ASSEMBLY.       
JRNL        REF    J. BIOL. CHEM.                V. 293 18828 2018              
JRNL        REFN                   ESSN 1083-351X                               
JRNL        PMID   30309983                                                     
JRNL        DOI    10.1074/JBC.RA118.003944                                     
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ         
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 6CV8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-18.                  
REMARK 100 THE DEPOSITION ID IS D_1000233428.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 305                                
REMARK 210  PH                             : 6                                  
REMARK 210  IONIC STRENGTH                 : 100                                
REMARK 210  PRESSURE                       : 1 ATM                              
REMARK 210  SAMPLE CONTENTS                : 100 UM [U-98% 15N] MATRIX          
REMARK 210  PROTEIN, 50 MM SODIUM PHOSPHATE, 2 MM TCEP, 1.6 MM D-MYO-           
REMARK 210  INOSITOL-1,4,5-TRIPHOSPHATE, 95% H2O/5% D2O                         
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC                     
REMARK 210  SPECTROMETER FIELD STRENGTH    : 700 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE II                          
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE, ANALYSIS, HADDOCK         
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 200                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 GLU A   2      -36.21   -174.16                                   
REMARK 500  1 CYS A  16      -49.23   -138.19                                   
REMARK 500  1 ILE A  64      -74.73    -86.16                                   
REMARK 500  2 GLU A   2      -36.27   -174.11                                   
REMARK 500  2 CYS A  16      -49.33   -138.17                                   
REMARK 500  2 ILE A  64      -74.81    -86.06                                   
REMARK 500  3 GLU A   2      -36.16   -174.20                                   
REMARK 500  3 CYS A  16      -49.27   -138.23                                   
REMARK 500  3 ILE A  64      -74.79    -86.16                                   
REMARK 500  4 GLU A   2      -36.21   -174.14                                   
REMARK 500  4 CYS A  16      -49.36   -138.12                                   
REMARK 500  4 ILE A  64      -74.66    -86.15                                   
REMARK 500  5 GLU A   2      -36.29   -174.06                                   
REMARK 500  5 CYS A  16      -49.33   -138.19                                   
REMARK 500  5 ILE A  64      -74.78    -86.15                                   
REMARK 500  6 GLU A   2      -36.32   -174.07                                   
REMARK 500  6 CYS A  16      -49.25   -138.13                                   
REMARK 500  6 ILE A  64      -74.80    -86.19                                   
REMARK 500  7 GLU A   2      -36.27   -174.06                                   
REMARK 500  7 CYS A  16      -49.23   -138.16                                   
REMARK 500  7 ILE A  64      -74.79    -86.16                                   
REMARK 500  8 GLU A   2      -36.26   -174.14                                   
REMARK 500  8 CYS A  16      -49.28   -138.12                                   
REMARK 500  8 ILE A  64      -74.71    -86.23                                   
REMARK 500  9 GLU A   2      -36.31   -174.06                                   
REMARK 500  9 CYS A  16      -49.23   -138.23                                   
REMARK 500  9 ILE A  64      -74.81    -86.06                                   
REMARK 500 10 GLU A   2      -36.34   -174.12                                   
REMARK 500 10 CYS A  16      -49.28   -138.17                                   
REMARK 500 10 ILE A  64      -74.74    -86.23                                   
REMARK 500 11 GLU A   2      -36.18   -174.10                                   
REMARK 500 11 CYS A  16      -49.30   -138.17                                   
REMARK 500 11 ILE A  64      -74.79    -86.14                                   
REMARK 500 12 GLU A   2      -36.23   -174.02                                   
REMARK 500 12 CYS A  16      -49.19   -138.22                                   
REMARK 500 12 ILE A  64      -74.79    -86.09                                   
REMARK 500 13 GLU A   2      -36.27   -174.10                                   
REMARK 500 13 CYS A  16      -49.21   -138.20                                   
REMARK 500 13 ILE A  64      -74.77    -86.18                                   
REMARK 500 14 GLU A   2      -36.09   -174.10                                   
REMARK 500 14 CYS A  16      -49.30   -138.17                                   
REMARK 500 14 ILE A  64      -74.76    -86.11                                   
REMARK 500 15 GLU A   2      -36.15   -174.09                                   
REMARK 500 15 CYS A  16      -49.41   -138.15                                   
REMARK 500 15 ILE A  64      -74.80    -86.12                                   
REMARK 500 16 GLU A   2      -36.29   -174.09                                   
REMARK 500 16 CYS A  16      -49.31   -138.19                                   
REMARK 500 16 ILE A  64      -74.76    -86.09                                   
REMARK 500 17 GLU A   2      -36.25   -174.08                                   
REMARK 500 17 CYS A  16      -49.35   -138.16                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      60 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue I3P A 101                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 6CE5   RELATED DB: PDB                                   
REMARK 900 MA STRUCTURE USED FOR DOCKING                                        
REMARK 900 RELATED ID: 30404   RELATED DB: BMRB                                 
REMARK 900 RELATED ID: 6CUS   RELATED DB: PDB                                   
DBREF  6CV8 A    1    87  UNP    P03354   POL_RSVP         1     87             
SEQADV 6CV8 SER A    1  UNP  P03354    MET     1 ENGINEERED MUTATION            
SEQRES   1 A   87  SER GLU ALA VAL ILE LYS VAL ILE SER SER ALA CYS LYS          
SEQRES   2 A   87  THR TYR CYS GLY LYS THR SER PRO SER LYS LYS GLU ILE          
SEQRES   3 A   87  GLY ALA MET LEU SER LEU LEU GLN LYS GLU GLY LEU LEU          
SEQRES   4 A   87  MET SER PRO SER ASP LEU TYR SER PRO GLY SER TRP ASP          
SEQRES   5 A   87  PRO ILE THR ALA ALA LEU SER GLN ARG ALA MET ILE LEU          
SEQRES   6 A   87  GLY LYS SER GLY GLU LEU LYS THR TRP GLY LEU VAL LEU          
SEQRES   7 A   87  GLY ALA LEU LYS ALA ALA ARG GLU GLU                          
HET    I3P  A 101      34                                                       
HETNAM     I3P D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE                                
FORMUL   2  I3P    C6 H15 O15 P3                                                
HELIX    1 AA1 ALA A    3  SER A   10  1                                   8    
HELIX    2 AA2 ALA A   11  CYS A   16  1                                   6    
HELIX    3 AA3 GLY A   17  SER A   20  5                                   4    
HELIX    4 AA4 SER A   22  GLU A   36  1                                  15    
HELIX    5 AA5 SER A   41  SER A   47  5                                   7    
HELIX    6 AA6 SER A   50  GLY A   66  1                                  17    
HELIX    7 AA7 GLU A   70  ARG A   85  1                                  16    
SITE     1 AC1  6 LYS A   6  SER A   9  LYS A  13  SER A  22                    
SITE     2 AC1  6 LYS A  23  LYS A  24                                          
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000