PDB Short entry for 6DC0 HEADER SIGNALING PROTEIN 03-MAY-18 6DC0 TITLE TRIBBLES (TRIB1) PSEUDOKINASE FUSED TO CCAAT-ENHANCER BINDING PROTEIN TITLE 2 (C/EBPALPHA) DEGRON COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIBBLES HOMOLOG 1,CCAAT/ENHANCER-BINDING PROTEIN ALPHA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TRB-1,G-PROTEIN-COUPLED RECEPTOR-INDUCED GENE 2 PROTEIN,GIG- COMPND 5 2,SKIP1,C/EBP ALPHA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIB1, C8FW, GIG2, TRB1, CEBPA, CEBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRIBBLES, PSUEDOKINASE, CCAAT-ENHANCER BINDING PROTEIN, TRB1, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.A.JAMIESON,J.L.BREWSTER,P.D.MACE REVDAT 3 04-OCT-23 6DC0 1 REMARK REVDAT 2 01-JAN-20 6DC0 1 COMPND REVDAT 1 10-OCT-18 6DC0 0 JRNL AUTH S.A.JAMIESON,Z.RUAN,A.E.BURGESS,J.R.CURRY,H.D.MCMILLAN, JRNL AUTH 2 J.L.BREWSTER,A.K.DUNBIER,A.D.AXTMAN,N.KANNAN,P.D.MACE JRNL TITL SUBSTRATE BINDING ALLOSTERICALLY RELIEVES AUTOINHIBITION OF JRNL TITL 2 THE PSEUDOKINASE TRIB1. JRNL REF SCI SIGNAL V. 11 2018 JRNL REFN ESSN 1937-9145 JRNL PMID 30254053 JRNL DOI 10.1126/SCISIGNAL.AAU0597 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 23461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1222 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1669 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.3660 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4311 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 113.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : 1.34000 REMARK 3 B12 (A**2) : -0.21000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.533 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.340 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.326 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 39.462 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4416 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4263 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5967 ; 1.654 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9816 ; 1.338 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 531 ; 6.805 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 203 ;35.522 ;22.217 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 784 ;18.330 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;21.916 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 664 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4851 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1030 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2136 ; 3.774 ; 6.628 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2135 ; 3.769 ; 6.628 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2660 ; 5.853 ; 9.946 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2661 ; 5.853 ; 9.947 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2279 ; 4.115 ; 7.090 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2280 ; 4.114 ; 7.091 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3307 ; 6.676 ;10.454 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 18093 ;11.392 ;63.365 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 18090 ;11.392 ;63.362 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 89 508 B 89 508 30588 0.13 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 88 A 509 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8041 30.9651 184.7332 REMARK 3 T TENSOR REMARK 3 T11: 0.1725 T22: 0.2556 REMARK 3 T33: 0.3323 T12: -0.0752 REMARK 3 T13: -0.0457 T23: 0.2063 REMARK 3 L TENSOR REMARK 3 L11: 1.8370 L22: 4.2619 REMARK 3 L33: 1.7331 L12: -0.5991 REMARK 3 L13: 0.1312 L23: -1.3428 REMARK 3 S TENSOR REMARK 3 S11: 0.1204 S12: 0.0460 S13: 0.0607 REMARK 3 S21: 0.4067 S22: -0.2872 S23: 0.1490 REMARK 3 S31: 0.0847 S32: 0.0189 S33: 0.1669 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 89 B 516 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0676 61.2422 159.3720 REMARK 3 T TENSOR REMARK 3 T11: 0.1389 T22: 0.4412 REMARK 3 T33: 0.8130 T12: 0.1628 REMARK 3 T13: 0.1274 T23: 0.5374 REMARK 3 L TENSOR REMARK 3 L11: 2.6676 L22: 4.8588 REMARK 3 L33: 1.5133 L12: 1.5610 REMARK 3 L13: -0.2405 L23: -0.4649 REMARK 3 S TENSOR REMARK 3 S11: 0.2434 S12: 0.3407 S13: 0.3886 REMARK 3 S21: -0.5356 S22: -0.5982 S23: -0.4171 REMARK 3 S31: -0.0029 S32: -0.0080 S33: 0.3549 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6DC0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234287. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24777 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5CEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.8 M NA ACETATE, 0.1 M BIS-TRIS PROP REMARK 280 7 PH WITH 5% SODIUM CITRATE, PH 7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.90167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 221.80333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 166.35250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 277.25417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.45083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 110.90167 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 221.80333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 277.25417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 166.35250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 55.45083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 84 REMARK 465 ALA A 85 REMARK 465 PRO A 86 REMARK 465 GLY A 87 REMARK 465 LEU A 484 REMARK 465 GLU A 485 REMARK 465 GLY A 486 REMARK 465 SER A 487 REMARK 465 GLY A 488 REMARK 465 SER A 489 REMARK 465 SER A 490 REMARK 465 GLY A 491 REMARK 465 GLY A 492 REMARK 465 PRO A 493 REMARK 465 GLY A 494 REMARK 465 GLY A 495 REMARK 465 GLY A 496 REMARK 465 ILE A 497 REMARK 465 CYS A 498 REMARK 465 ILE A 510 REMARK 465 ASP A 511 REMARK 465 PRO A 512 REMARK 465 ALA A 513 REMARK 465 ALA A 514 REMARK 465 PHE A 515 REMARK 465 ASN A 516 REMARK 465 ASP A 517 REMARK 465 SER B 84 REMARK 465 ALA B 85 REMARK 465 PRO B 86 REMARK 465 GLY B 87 REMARK 465 PRO B 88 REMARK 465 GLU B 101 REMARK 465 ARG B 102 REMARK 465 ILE B 111 REMARK 465 HIS B 112 REMARK 465 GLU B 485 REMARK 465 GLY B 486 REMARK 465 SER B 487 REMARK 465 GLY B 488 REMARK 465 SER B 489 REMARK 465 SER B 490 REMARK 465 GLY B 491 REMARK 465 GLY B 492 REMARK 465 PRO B 493 REMARK 465 GLY B 494 REMARK 465 GLY B 495 REMARK 465 GLY B 496 REMARK 465 ASP B 517 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 209 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 218 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 91 -73.58 -114.71 REMARK 500 ALA A 92 96.24 -163.39 REMARK 500 ALA A 100 -62.98 -26.43 REMARK 500 GLU A 103 -74.83 -61.55 REMARK 500 HIS A 112 -76.87 -75.80 REMARK 500 THR A 113 -178.63 -68.37 REMARK 500 ASP A 237 16.72 -148.70 REMARK 500 LEU A 319 46.14 -89.06 REMARK 500 GLU A 501 68.88 -101.75 REMARK 500 ALA A 508 -2.19 -53.56 REMARK 500 ILE B 91 -73.15 -114.39 REMARK 500 ALA B 92 96.51 -163.46 REMARK 500 ASP B 237 16.87 -149.41 REMARK 500 LEU B 319 46.50 -89.49 REMARK 500 GLU B 501 69.56 -103.70 REMARK 500 REMARK 500 REMARK: NULL DBREF 6DC0 A 90 485 UNP Q96RU8 TRIB1_HUMAN 90 343 DBREF 6DC0 A 493 517 UNP P49715 CEBPA_HUMAN 51 75 DBREF 6DC0 B 90 485 UNP Q96RU8 TRIB1_HUMAN 90 343 DBREF 6DC0 B 493 517 UNP P49715 CEBPA_HUMAN 51 75 SEQADV 6DC0 SER A 84 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 ALA A 85 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 PRO A 86 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 GLY A 87 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 PRO A 88 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 SER A 89 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 GLY A 486 UNP Q96RU8 LINKER SEQADV 6DC0 SER A 487 UNP Q96RU8 LINKER SEQADV 6DC0 GLY A 488 UNP Q96RU8 LINKER SEQADV 6DC0 SER A 489 UNP Q96RU8 LINKER SEQADV 6DC0 SER A 490 UNP Q96RU8 LINKER SEQADV 6DC0 GLY A 491 UNP Q96RU8 LINKER SEQADV 6DC0 GLY A 492 UNP Q96RU8 LINKER SEQADV 6DC0 GLY A 494 UNP P49715 LEU 52 CONFLICT SEQADV 6DC0 SER B 84 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 ALA B 85 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 PRO B 86 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 GLY B 87 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 PRO B 88 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 SER B 89 UNP Q96RU8 EXPRESSION TAG SEQADV 6DC0 GLY B 486 UNP Q96RU8 LINKER SEQADV 6DC0 SER B 487 UNP Q96RU8 LINKER SEQADV 6DC0 GLY B 488 UNP Q96RU8 LINKER SEQADV 6DC0 SER B 489 UNP Q96RU8 LINKER SEQADV 6DC0 SER B 490 UNP Q96RU8 LINKER SEQADV 6DC0 GLY B 491 UNP Q96RU8 LINKER SEQADV 6DC0 GLY B 492 UNP Q96RU8 LINKER SEQADV 6DC0 GLY B 494 UNP P49715 LEU 52 CONFLICT SEQRES 1 A 292 SER ALA PRO GLY PRO SER ARG ILE ALA ASP TYR LEU LEU SEQRES 2 A 292 LEU PRO LEU ALA GLU ARG GLU HIS VAL SER ARG ALA LEU SEQRES 3 A 292 CYS ILE HIS THR GLY ARG GLU LEU ARG CYS LYS VAL PHE SEQRES 4 A 292 PRO ILE LYS HIS TYR GLN ASP LYS ILE ARG PRO TYR ILE SEQRES 5 A 292 GLN LEU PRO SER HIS SER ASN ILE THR GLY ILE VAL GLU SEQRES 6 A 292 VAL ILE LEU GLY GLU THR LYS ALA TYR VAL PHE PHE GLU SEQRES 7 A 292 LYS ASP PHE GLY ASP MET HIS SER TYR VAL ARG SER ARG SEQRES 8 A 292 LYS ARG LEU ARG GLU GLU GLU ALA ALA ARG LEU PHE LYS SEQRES 9 A 292 GLN ILE VAL SER ALA VAL ALA HIS CYS HIS GLN SER ALA SEQRES 10 A 292 ILE VAL LEU GLY ASP LEU LYS LEU ARG LYS PHE VAL PHE SEQRES 11 A 292 SER THR GLU GLU ARG THR GLN LEU ARG LEU GLU SER LEU SEQRES 12 A 292 GLU ASP THR HIS ILE MET LYS GLY GLU ASP ASP ALA LEU SEQRES 13 A 292 SER ASP LYS HIS GLY CYS PRO ALA TYR VAL SER PRO GLU SEQRES 14 A 292 ILE LEU ASN THR THR GLY THR TYR SER GLY LYS ALA ALA SEQRES 15 A 292 ASP VAL TRP SER LEU GLY VAL MET LEU TYR THR LEU LEU SEQRES 16 A 292 VAL GLY ARG TYR PRO PHE HIS ASP SER ASP PRO SER ALA SEQRES 17 A 292 LEU PHE SER LYS ILE ARG ARG GLY GLN PHE CYS ILE PRO SEQRES 18 A 292 GLU HIS ILE SER PRO LYS ALA ARG CYS LEU ILE ARG SER SEQRES 19 A 292 LEU LEU ARG ARG GLU PRO SER GLU ARG LEU THR ALA PRO SEQRES 20 A 292 GLU ILE LEU LEU HIS PRO TRP PHE GLU SER VAL LEU GLU SEQRES 21 A 292 GLY SER GLY SER SER GLY GLY PRO GLY GLY GLY ILE CYS SEQRES 22 A 292 GLU HIS GLU THR SER ILE ASP ILE SER ALA TYR ILE ASP SEQRES 23 A 292 PRO ALA ALA PHE ASN ASP SEQRES 1 B 292 SER ALA PRO GLY PRO SER ARG ILE ALA ASP TYR LEU LEU SEQRES 2 B 292 LEU PRO LEU ALA GLU ARG GLU HIS VAL SER ARG ALA LEU SEQRES 3 B 292 CYS ILE HIS THR GLY ARG GLU LEU ARG CYS LYS VAL PHE SEQRES 4 B 292 PRO ILE LYS HIS TYR GLN ASP LYS ILE ARG PRO TYR ILE SEQRES 5 B 292 GLN LEU PRO SER HIS SER ASN ILE THR GLY ILE VAL GLU SEQRES 6 B 292 VAL ILE LEU GLY GLU THR LYS ALA TYR VAL PHE PHE GLU SEQRES 7 B 292 LYS ASP PHE GLY ASP MET HIS SER TYR VAL ARG SER ARG SEQRES 8 B 292 LYS ARG LEU ARG GLU GLU GLU ALA ALA ARG LEU PHE LYS SEQRES 9 B 292 GLN ILE VAL SER ALA VAL ALA HIS CYS HIS GLN SER ALA SEQRES 10 B 292 ILE VAL LEU GLY ASP LEU LYS LEU ARG LYS PHE VAL PHE SEQRES 11 B 292 SER THR GLU GLU ARG THR GLN LEU ARG LEU GLU SER LEU SEQRES 12 B 292 GLU ASP THR HIS ILE MET LYS GLY GLU ASP ASP ALA LEU SEQRES 13 B 292 SER ASP LYS HIS GLY CYS PRO ALA TYR VAL SER PRO GLU SEQRES 14 B 292 ILE LEU ASN THR THR GLY THR TYR SER GLY LYS ALA ALA SEQRES 15 B 292 ASP VAL TRP SER LEU GLY VAL MET LEU TYR THR LEU LEU SEQRES 16 B 292 VAL GLY ARG TYR PRO PHE HIS ASP SER ASP PRO SER ALA SEQRES 17 B 292 LEU PHE SER LYS ILE ARG ARG GLY GLN PHE CYS ILE PRO SEQRES 18 B 292 GLU HIS ILE SER PRO LYS ALA ARG CYS LEU ILE ARG SER SEQRES 19 B 292 LEU LEU ARG ARG GLU PRO SER GLU ARG LEU THR ALA PRO SEQRES 20 B 292 GLU ILE LEU LEU HIS PRO TRP PHE GLU SER VAL LEU GLU SEQRES 21 B 292 GLY SER GLY SER SER GLY GLY PRO GLY GLY GLY ILE CYS SEQRES 22 B 292 GLU HIS GLU THR SER ILE ASP ILE SER ALA TYR ILE ASP SEQRES 23 B 292 PRO ALA ALA PHE ASN ASP FORMUL 3 HOH *40(H2 O) HELIX 1 AA1 ILE A 124 LEU A 137 1 14 HELIX 2 AA2 ASP A 166 ARG A 174 1 9 HELIX 3 AA3 ARG A 178 SER A 199 1 22 HELIX 4 AA4 LYS A 207 ARG A 209 5 3 HELIX 5 AA5 CYS A 245 VAL A 249 5 5 HELIX 6 AA6 SER A 250 THR A 256 1 7 HELIX 7 AA7 GLY A 262 GLY A 280 1 19 HELIX 8 AA8 ASP A 288 GLY A 299 1 12 HELIX 9 AA9 SER A 308 LEU A 319 1 12 HELIX 10 AB1 GLU A 322 ARG A 326 5 5 HELIX 11 AB2 THR A 328 LEU A 333 1 6 HELIX 12 AB3 PRO A 336 VAL A 341 1 6 HELIX 13 AB4 SER A 507 TYR A 509 5 3 HELIX 14 AB5 ILE B 124 LEU B 137 1 14 HELIX 15 AB6 ASP B 166 ARG B 174 1 9 HELIX 16 AB7 ARG B 178 SER B 199 1 22 HELIX 17 AB8 LYS B 207 ARG B 209 5 3 HELIX 18 AB9 CYS B 245 VAL B 249 5 5 HELIX 19 AC1 SER B 250 THR B 256 1 7 HELIX 20 AC2 GLY B 262 GLY B 280 1 19 HELIX 21 AC3 ASP B 288 GLY B 299 1 12 HELIX 22 AC4 SER B 308 LEU B 319 1 12 HELIX 23 AC5 GLU B 322 ARG B 326 5 5 HELIX 24 AC6 THR B 328 LEU B 333 1 6 HELIX 25 AC7 PRO B 336 LEU B 342 1 7 HELIX 26 AC8 SER B 507 ILE B 510 5 4 HELIX 27 AC9 ASP B 511 ASN B 516 1 6 SHEET 1 AA1 6 SER A 89 ARG A 90 0 SHEET 2 AA1 6 TYR A 94 LEU A 97 -1 O LEU A 96 N SER A 89 SHEET 3 AA1 6 VAL A 105 CYS A 110 -1 O ARG A 107 N LEU A 97 SHEET 4 AA1 6 GLU A 116 PRO A 123 -1 O LEU A 117 N ALA A 108 SHEET 5 AA1 6 LYS A 155 PHE A 160 -1 O PHE A 160 N ARG A 118 SHEET 6 AA1 6 GLU A 148 LEU A 151 -1 N GLU A 148 O PHE A 159 SHEET 1 AA2 2 ILE A 201 VAL A 202 0 SHEET 2 AA2 2 HIS A 230 ILE A 231 -1 O HIS A 230 N VAL A 202 SHEET 1 AA3 2 PHE A 211 PHE A 213 0 SHEET 2 AA3 2 LEU A 221 LEU A 223 -1 O ARG A 222 N VAL A 212 SHEET 1 AA4 2 ALA A 238 LEU A 239 0 SHEET 2 AA4 2 TYR A 260 SER A 261 -1 O TYR A 260 N LEU A 239 SHEET 1 AA5 2 HIS A 243 GLY A 244 0 SHEET 2 AA5 2 ILE B 504 ASP B 505 -1 O ILE B 504 N GLY A 244 SHEET 1 AA6 2 ILE A 504 ASP A 505 0 SHEET 2 AA6 2 HIS B 243 GLY B 244 -1 O GLY B 244 N ILE A 504 SHEET 1 AA7 5 LEU B 95 LEU B 97 0 SHEET 2 AA7 5 VAL B 105 LEU B 109 -1 O ARG B 107 N LEU B 97 SHEET 3 AA7 5 GLU B 116 PRO B 123 -1 O LEU B 117 N ALA B 108 SHEET 4 AA7 5 LYS B 155 PHE B 160 -1 O PHE B 160 N ARG B 118 SHEET 5 AA7 5 GLU B 148 LEU B 151 -1 N GLU B 148 O PHE B 159 SHEET 1 AA8 2 ILE B 201 VAL B 202 0 SHEET 2 AA8 2 HIS B 230 ILE B 231 -1 O HIS B 230 N VAL B 202 SHEET 1 AA9 2 PHE B 211 PHE B 213 0 SHEET 2 AA9 2 LEU B 221 LEU B 223 -1 O ARG B 222 N VAL B 212 SHEET 1 AB1 2 ALA B 238 LEU B 239 0 SHEET 2 AB1 2 TYR B 260 SER B 261 -1 O TYR B 260 N LEU B 239 CRYST1 98.809 98.809 332.705 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010121 0.005843 0.000000 0.00000 SCALE2 0.000000 0.011686 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003006 0.00000