PDB Short entry for 6E8Z
HEADER    OXIDOREDUCTASE                          31-JUL-18   6E8Z              
TITLE     BINARY COMPLEX OF HUMAN GLYCEROL 3-PHOSPHATE DEHYDROGENASE WITH NAD   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)], CYTOPLASMIC;  
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: GPDH-C;                                                     
COMPND   5 EC: 1.1.1.8;                                                         
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: GPD1;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    OXIDOREDUCTASE                                                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    L.S.MYDY,A.M.GULICK                                                   
REVDAT   3   18-DEC-19 6E8Z    1       REMARK                                   
REVDAT   2   13-MAR-19 6E8Z    1       JRNL                                     
REVDAT   1   30-JAN-19 6E8Z    0                                                
JRNL        AUTH   L.S.MYDY,J.R.CRISTOBAL,R.D.KATIGBAK,P.BAUER,A.C.REYES,       
JRNL        AUTH 2 S.C.L.KAMERLIN,J.P.RICHARD,A.M.GULICK                        
JRNL        TITL   HUMAN GLYCEROL 3-PHOSPHATE DEHYDROGENASE: X-RAY CRYSTAL      
JRNL        TITL 2 STRUCTURES THAT GUIDE THE INTERPRETATION OF MUTAGENESIS      
JRNL        TITL 3 STUDIES.                                                     
JRNL        REF    BIOCHEMISTRY                  V.  58  1061 2019              
JRNL        REFN                   ISSN 1520-4995                               
JRNL        PMID   30640445                                                     
JRNL        DOI    10.1021/ACS.BIOCHEM.8B01103                                  
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.10 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (1.12_2829)                                   
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 33.96                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.070                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 93.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 37372                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.172                           
REMARK   3   R VALUE            (WORKING SET) : 0.169                           
REMARK   3   FREE R VALUE                     : 0.225                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.650                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 3284                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 36.1136 -  5.9636    0.96     2975   198  0.1649 0.1846        
REMARK   3     2  5.9636 -  4.7369    0.93     2978   104  0.1437 0.1990        
REMARK   3     3  4.7369 -  4.1391    0.97     3033   174  0.1236 0.1673        
REMARK   3     4  4.1391 -  3.7611    0.92     2903   117  0.1454 0.1447        
REMARK   3     5  3.7611 -  3.4917    0.95     3017   135  0.1526 0.2374        
REMARK   3     6  3.4917 -  3.2860    0.95     2982   115  0.1713 0.2179        
REMARK   3     7  3.2860 -  3.1215    0.96     3049   159  0.1819 0.2482        
REMARK   3     8  3.1215 -  2.9857    0.94     2929   167  0.1725 0.2218        
REMARK   3     9  2.9857 -  2.8708    0.88     2785   145  0.1783 0.2681        
REMARK   3    10  2.8708 -  2.7718    0.92     2862   150  0.1802 0.2576        
REMARK   3    11  2.7718 -  2.6852    0.94     2974   126  0.1861 0.2353        
REMARK   3    12  2.6852 -  2.6084    0.94     2969   136  0.1783 0.2703        
REMARK   3    13  2.6084 -  2.5398    0.94     2937   168  0.1854 0.2371        
REMARK   3    14  2.5398 -  2.4778    0.94     2994   136  0.1723 0.2323        
REMARK   3    15  2.4778 -  2.4215    0.91     2823   162  0.1824 0.2729        
REMARK   3    16  2.4215 -  2.3700    0.88     2740   149  0.1922 0.2604        
REMARK   3    17  2.3700 -  2.3226    0.90     2846   111  0.1999 0.2875        
REMARK   3    18  2.3226 -  2.2788    0.93     2956   153  0.2074 0.3091        
REMARK   3    19  2.2788 -  2.2381    0.92     2891   148  0.2127 0.2665        
REMARK   3    20  2.2381 -  2.2002    0.93     2943   112  0.2205 0.3265        
REMARK   3    21  2.2002 -  2.1647    0.93     2974   137  0.2312 0.3559        
REMARK   3    22  2.1647 -  2.1314    0.94     2929   163  0.2357 0.3080        
REMARK   3    23  2.1314 -  2.1000    0.91     2855   119  0.2510 0.3596        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.270            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.730           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 31.21                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 37.92                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.012           5258                                  
REMARK   3   ANGLE     :  1.160           7140                                  
REMARK   3   CHIRALITY :  0.058            832                                  
REMARK   3   PLANARITY :  0.008            915                                  
REMARK   3   DIHEDRAL  : 13.342           3086                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 6E8Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-18.                  
REMARK 100 THE DEPOSITION ID IS D_1000235793.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 05-MAR-17                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SSRL                               
REMARK 200  BEAMLINE                       : BL12-2                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97946                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.2.1                       
REMARK 200  DATA SCALING SOFTWARE          : AIMLESS                            
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 37384                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.100                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 33.960                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 96.6                               
REMARK 200  DATA REDUNDANCY                : 3.200                              
REMARK 200  R MERGE                    (I) : 0.04700                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 13.5000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.18                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.1                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.20                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.19500                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 1X0X                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 44.89                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM POTASSIUM CHLORIDE, 23% PEG       
REMARK 280  20000, 0.1 M BIS-TRIS PROPANE PH 7.0, 10 MM NAD; 10 MG/ML, VAPOR    
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 287K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       39.39000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 7570 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 24830 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     GLY A    46                                                      
REMARK 465     GLY A    47                                                      
REMARK 465     VAL A   122                                                      
REMARK 465     ASP A   123                                                      
REMARK 465     GLU A   124                                                      
REMARK 465     GLY A   125                                                      
REMARK 465     PRO A   126                                                      
REMARK 465     ASN A   127                                                      
REMARK 465     GLY A   128                                                      
REMARK 465     ASN A   293                                                      
REMARK 465     MET B     1                                                      
REMARK 465     GLY B   121                                                      
REMARK 465     VAL B   122                                                      
REMARK 465     ASP B   123                                                      
REMARK 465     GLU B   124                                                      
REMARK 465     GLY B   125                                                      
REMARK 465     PRO B   126                                                      
REMARK 465     ASN B   127                                                      
REMARK 465     LEU B   292                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ASP A  44    CG   OD1  OD2                                       
REMARK 470     ILE A  45    CG1  CG2  CD1                                       
REMARK 470     LYS A  48    CG   CD   CE   NZ                                   
REMARK 470     LEU A  50    CG   CD1  CD2                                       
REMARK 470     GLU A  59    CG   CD   OE1  OE2                                  
REMARK 470     VAL A  61    CG1  CG2                                            
REMARK 470     LYS A  68    CG   CD   CE   NZ                                   
REMARK 470     ASP A  85    CG   OD1  OD2                                       
REMARK 470     LYS A 100    CG   CD   CE   NZ                                   
REMARK 470     ARG A 269    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A 272    CG   CD   CE   NZ                                   
REMARK 470     LYS A 282    CG   CD   CE   NZ                                   
REMARK 470     GLU A 285    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 289    CG   CD   CE   NZ                                   
REMARK 470     LEU A 292    CG   CD1  CD2                                       
REMARK 470     LYS A 296    CG   CD   CE   NZ                                   
REMARK 470     LYS B  48    CG   CD   CE   NZ                                   
REMARK 470     LYS B  49    CG   CD   CE   NZ                                   
REMARK 470     ASP B  85    CG   OD1  OD2                                       
REMARK 470     LYS B 100    CG   CD   CE   NZ                                   
REMARK 470     ARG B 139    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS B 169    CG   CD   CE   NZ                                   
REMARK 470     ARG B 269    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS B 272    CG   CD   CE   NZ                                   
REMARK 470     GLU B 285    CG   CD   OE1  OE2                                  
REMARK 470     GLU B 290    CG   CD   OE1  OE2                                  
REMARK 470     ASN B 293    CG   OD1  ND2                                       
REMARK 470     GLN B 295    CG   CD   OE1  NE2                                  
REMARK 470     LYS B 296    CG   CD   CE   NZ                                   
REMARK 470     LYS B 318    CG   CD   CE   NZ                                   
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   OE2  GLU A   155     O    HOH A   501              2.06            
REMARK 500   O    CYS A   341     O    HOH A   502              2.12            
REMARK 500   O    HOH B   578     O    HOH B   611              2.15            
REMARK 500   OE1  GLU A    43     O    HOH A   503              2.16            
REMARK 500   OE1  GLN B   175     O    HOH B   501              2.16            
REMARK 500   OE1  GLN A   175     O    HOH A   504              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A  11       28.22   -145.92                                   
REMARK 500    LEU A  64       72.03   -115.97                                   
REMARK 500    SER A 283      159.62    -47.25                                   
REMARK 500    SER B  11       32.27   -147.94                                   
REMARK 500    LEU B  64       58.89   -150.56                                   
REMARK 500    LEU B 129        8.45     90.88                                   
REMARK 500    ASN B 344       48.08   -140.25                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                               K A 406   K                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ALA A  26   O                                                      
REMARK 620 2 ALA A  27   O    68.9                                              
REMARK 620 3 LEU A  29   O    80.3  99.0                                        
REMARK 620 4 PHE A  32   O    83.1 151.5  80.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                               K B 404   K                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ALA B  26   O                                                      
REMARK 620 2 ALA B  27   O    75.6                                              
REMARK 620 3 LEU B  29   O    85.5  97.9                                        
REMARK 620 4 PHE B  32   O    77.7 153.3  80.7                                  
REMARK 620 5 HOH B 584   O   140.9 142.3  95.0  63.9                            
REMARK 620 6 HOH B 598   O   133.4  64.5  77.7 139.4  84.2                      
REMARK 620 7 HOH B 507   O   109.6  65.3 152.2 124.5  87.6  75.0                
REMARK 620 N                    1     2     3     4     5     6                 
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 401                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 402                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue K A 406                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue NAD B 401                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 402                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 403                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AD1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue K B 404                   
DBREF  6E8Z A    1   349  UNP    P21695   GPDA_HUMAN       1    349             
DBREF  6E8Z B    1   349  UNP    P21695   GPDA_HUMAN       1    349             
SEQRES   1 A  349  MET ALA SER LYS LYS VAL CYS ILE VAL GLY SER GLY ASN          
SEQRES   2 A  349  TRP GLY SER ALA ILE ALA LYS ILE VAL GLY GLY ASN ALA          
SEQRES   3 A  349  ALA GLN LEU ALA GLN PHE ASP PRO ARG VAL THR MET TRP          
SEQRES   4 A  349  VAL PHE GLU GLU ASP ILE GLY GLY LYS LYS LEU THR GLU          
SEQRES   5 A  349  ILE ILE ASN THR GLN HIS GLU ASN VAL LYS TYR LEU PRO          
SEQRES   6 A  349  GLY HIS LYS LEU PRO PRO ASN VAL VAL ALA VAL PRO ASP          
SEQRES   7 A  349  VAL VAL GLN ALA ALA GLU ASP ALA ASP ILE LEU ILE PHE          
SEQRES   8 A  349  VAL VAL PRO HIS GLN PHE ILE GLY LYS ILE CYS ASP GLN          
SEQRES   9 A  349  LEU LYS GLY HIS LEU LYS ALA ASN ALA THR GLY ILE SER          
SEQRES  10 A  349  LEU ILE LYS GLY VAL ASP GLU GLY PRO ASN GLY LEU LYS          
SEQRES  11 A  349  LEU ILE SER GLU VAL ILE GLY GLU ARG LEU GLY ILE PRO          
SEQRES  12 A  349  MET SER VAL LEU MET GLY ALA ASN ILE ALA SER GLU VAL          
SEQRES  13 A  349  ALA ASP GLU LYS PHE CYS GLU THR THR ILE GLY CYS LYS          
SEQRES  14 A  349  ASP PRO ALA GLN GLY GLN LEU LEU LYS GLU LEU MET GLN          
SEQRES  15 A  349  THR PRO ASN PHE ARG ILE THR VAL VAL GLN GLU VAL ASP          
SEQRES  16 A  349  THR VAL GLU ILE CYS GLY ALA LEU LYS ASN VAL VAL ALA          
SEQRES  17 A  349  VAL GLY ALA GLY PHE CYS ASP GLY LEU GLY PHE GLY ASP          
SEQRES  18 A  349  ASN THR LYS ALA ALA VAL ILE ARG LEU GLY LEU MET GLU          
SEQRES  19 A  349  MET ILE ALA PHE ALA LYS LEU PHE CYS SER GLY PRO VAL          
SEQRES  20 A  349  SER SER ALA THR PHE LEU GLU SER CYS GLY VAL ALA ASP          
SEQRES  21 A  349  LEU ILE THR THR CYS TYR GLY GLY ARG ASN ARG LYS VAL          
SEQRES  22 A  349  ALA GLU ALA PHE ALA ARG THR GLY LYS SER ILE GLU GLN          
SEQRES  23 A  349  LEU GLU LYS GLU LEU LEU ASN GLY GLN LYS LEU GLN GLY          
SEQRES  24 A  349  PRO GLU THR ALA ARG GLU LEU TYR SER ILE LEU GLN HIS          
SEQRES  25 A  349  LYS GLY LEU VAL ASP LYS PHE PRO LEU PHE MET ALA VAL          
SEQRES  26 A  349  TYR LYS VAL CYS TYR GLU GLY GLN PRO VAL GLY GLU PHE          
SEQRES  27 A  349  ILE HIS CYS LEU GLN ASN HIS PRO GLU HIS MET                  
SEQRES   1 B  349  MET ALA SER LYS LYS VAL CYS ILE VAL GLY SER GLY ASN          
SEQRES   2 B  349  TRP GLY SER ALA ILE ALA LYS ILE VAL GLY GLY ASN ALA          
SEQRES   3 B  349  ALA GLN LEU ALA GLN PHE ASP PRO ARG VAL THR MET TRP          
SEQRES   4 B  349  VAL PHE GLU GLU ASP ILE GLY GLY LYS LYS LEU THR GLU          
SEQRES   5 B  349  ILE ILE ASN THR GLN HIS GLU ASN VAL LYS TYR LEU PRO          
SEQRES   6 B  349  GLY HIS LYS LEU PRO PRO ASN VAL VAL ALA VAL PRO ASP          
SEQRES   7 B  349  VAL VAL GLN ALA ALA GLU ASP ALA ASP ILE LEU ILE PHE          
SEQRES   8 B  349  VAL VAL PRO HIS GLN PHE ILE GLY LYS ILE CYS ASP GLN          
SEQRES   9 B  349  LEU LYS GLY HIS LEU LYS ALA ASN ALA THR GLY ILE SER          
SEQRES  10 B  349  LEU ILE LYS GLY VAL ASP GLU GLY PRO ASN GLY LEU LYS          
SEQRES  11 B  349  LEU ILE SER GLU VAL ILE GLY GLU ARG LEU GLY ILE PRO          
SEQRES  12 B  349  MET SER VAL LEU MET GLY ALA ASN ILE ALA SER GLU VAL          
SEQRES  13 B  349  ALA ASP GLU LYS PHE CYS GLU THR THR ILE GLY CYS LYS          
SEQRES  14 B  349  ASP PRO ALA GLN GLY GLN LEU LEU LYS GLU LEU MET GLN          
SEQRES  15 B  349  THR PRO ASN PHE ARG ILE THR VAL VAL GLN GLU VAL ASP          
SEQRES  16 B  349  THR VAL GLU ILE CYS GLY ALA LEU LYS ASN VAL VAL ALA          
SEQRES  17 B  349  VAL GLY ALA GLY PHE CYS ASP GLY LEU GLY PHE GLY ASP          
SEQRES  18 B  349  ASN THR LYS ALA ALA VAL ILE ARG LEU GLY LEU MET GLU          
SEQRES  19 B  349  MET ILE ALA PHE ALA LYS LEU PHE CYS SER GLY PRO VAL          
SEQRES  20 B  349  SER SER ALA THR PHE LEU GLU SER CYS GLY VAL ALA ASP          
SEQRES  21 B  349  LEU ILE THR THR CYS TYR GLY GLY ARG ASN ARG LYS VAL          
SEQRES  22 B  349  ALA GLU ALA PHE ALA ARG THR GLY LYS SER ILE GLU GLN          
SEQRES  23 B  349  LEU GLU LYS GLU LEU LEU ASN GLY GLN LYS LEU GLN GLY          
SEQRES  24 B  349  PRO GLU THR ALA ARG GLU LEU TYR SER ILE LEU GLN HIS          
SEQRES  25 B  349  LYS GLY LEU VAL ASP LYS PHE PRO LEU PHE MET ALA VAL          
SEQRES  26 B  349  TYR LYS VAL CYS TYR GLU GLY GLN PRO VAL GLY GLU PHE          
SEQRES  27 B  349  ILE HIS CYS LEU GLN ASN HIS PRO GLU HIS MET                  
HET    NAD  A 401      70                                                       
HET    PO4  A 402       5                                                       
HET    EDO  A 403      10                                                       
HET    EDO  A 404      10                                                       
HET    EDO  A 405      10                                                       
HET      K  A 406       1                                                       
HET    NAD  B 401      70                                                       
HET    PO4  B 402       5                                                       
HET    EDO  B 403      10                                                       
HET      K  B 404       1                                                       
HETNAM     NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE                                
HETNAM     PO4 PHOSPHATE ION                                                    
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETNAM       K POTASSIUM ION                                                    
HETSYN     EDO ETHYLENE GLYCOL                                                  
FORMUL   3  NAD    2(C21 H27 N7 O14 P2)                                         
FORMUL   4  PO4    2(O4 P 3-)                                                   
FORMUL   5  EDO    4(C2 H6 O2)                                                  
FORMUL   8    K    2(K 1+)                                                      
FORMUL  13  HOH   *230(H2 O)                                                    
HELIX    1 AA1 GLY A   12  LEU A   29  1                                  18    
HELIX    2 AA2 LYS A   49  HIS A   58  1                                  10    
HELIX    3 AA3 ASP A   78  GLU A   84  1                                   7    
HELIX    4 AA4 PRO A   94  GLN A   96  5                                   3    
HELIX    5 AA5 PHE A   97  LYS A  106  1                                  10    
HELIX    6 AA6 LEU A  131  GLY A  141  1                                  11    
HELIX    7 AA7 ILE A  152  ASP A  158  1                                   7    
HELIX    8 AA8 ASP A  170  GLN A  182  1                                  13    
HELIX    9 AA9 GLU A  193  GLY A  218  1                                  26    
HELIX   10 AB1 GLY A  220  CYS A  243  1                                  24    
HELIX   11 AB2 SER A  248  GLU A  254  5                                   7    
HELIX   12 AB3 GLY A  257  GLY A  268  1                                  12    
HELIX   13 AB4 GLY A  268  GLY A  281  1                                  14    
HELIX   14 AB5 SER A  283  LEU A  292  1                                  10    
HELIX   15 AB6 LEU A  297  GLY A  314  1                                  18    
HELIX   16 AB7 LEU A  315  LYS A  318  5                                   4    
HELIX   17 AB8 PHE A  319  GLU A  331  1                                  13    
HELIX   18 AB9 PRO A  334  GLN A  343  5                                  10    
HELIX   19 AC1 HIS A  345  MET A  349  5                                   5    
HELIX   20 AC2 GLY B   12  LEU B   29  1                                  18    
HELIX   21 AC3 LYS B   49  HIS B   58  1                                  10    
HELIX   22 AC4 ASP B   78  GLU B   84  1                                   7    
HELIX   23 AC5 PRO B   94  GLN B   96  5                                   3    
HELIX   24 AC6 PHE B   97  LYS B  106  1                                  10    
HELIX   25 AC7 LEU B  131  GLY B  141  1                                  11    
HELIX   26 AC8 ILE B  152  ASP B  158  1                                   7    
HELIX   27 AC9 ASP B  170  GLN B  182  1                                  13    
HELIX   28 AD1 GLU B  193  LEU B  217  1                                  25    
HELIX   29 AD2 GLY B  220  CYS B  243  1                                  24    
HELIX   30 AD3 SER B  248  GLU B  254  5                                   7    
HELIX   31 AD4 GLY B  257  GLY B  268  1                                  12    
HELIX   32 AD5 GLY B  268  GLY B  281  1                                  14    
HELIX   33 AD6 SER B  283  LEU B  291  1                                   9    
HELIX   34 AD7 LEU B  297  LYS B  313  1                                  17    
HELIX   35 AD8 GLY B  314  LYS B  318  5                                   5    
HELIX   36 AD9 PHE B  319  GLU B  331  1                                  13    
HELIX   37 AE1 PRO B  334  PHE B  338  5                                   5    
HELIX   38 AE2 ILE B  339  GLN B  343  5                                   5    
HELIX   39 AE3 HIS B  345  MET B  349  5                                   5    
SHEET    1 AA1 8 VAL A  73  VAL A  76  0                                        
SHEET    2 AA1 8 PHE A  32  TRP A  39  1  N  VAL A  36   O  VAL A  74           
SHEET    3 AA1 8 LYS A   4  VAL A   9  1  N  LYS A   4   O  ASP A  33           
SHEET    4 AA1 8 ILE A  88  PHE A  91  1  O  ILE A  90   N  VAL A   9           
SHEET    5 AA1 8 THR A 114  SER A 117  1  O  ILE A 116   N  PHE A  91           
SHEET    6 AA1 8 MET A 144  MET A 148  1  O  SER A 145   N  SER A 117           
SHEET    7 AA1 8 CYS A 162  GLY A 167 -1  O  GLY A 167   N  VAL A 146           
SHEET    8 AA1 8 PHE A 186  VAL A 191  1  O  THR A 189   N  ILE A 166           
SHEET    1 AA2 8 VAL B  73  VAL B  76  0                                        
SHEET    2 AA2 8 PHE B  32  TRP B  39  1  N  VAL B  36   O  VAL B  74           
SHEET    3 AA2 8 LYS B   4  VAL B   9  1  N  LYS B   4   O  ASP B  33           
SHEET    4 AA2 8 ILE B  88  PHE B  91  1  O  ILE B  88   N  CYS B   7           
SHEET    5 AA2 8 THR B 114  SER B 117  1  O  ILE B 116   N  PHE B  91           
SHEET    6 AA2 8 MET B 144  MET B 148  1  O  SER B 145   N  SER B 117           
SHEET    7 AA2 8 CYS B 162  GLY B 167 -1  O  THR B 165   N  MET B 148           
SHEET    8 AA2 8 PHE B 186  VAL B 191  1  O  VAL B 191   N  ILE B 166           
LINK         O   ALA A  26                 K     K A 406     1555   1555  2.64  
LINK         O   ALA A  27                 K     K A 406     1555   1555  3.18  
LINK         O   LEU A  29                 K     K A 406     1555   1555  2.64  
LINK         O   PHE A  32                 K     K A 406     1555   1555  2.77  
LINK         O   ALA B  26                 K     K B 404     1555   1555  2.73  
LINK         O   ALA B  27                 K     K B 404     1555   1555  3.02  
LINK         O   LEU B  29                 K     K B 404     1555   1555  2.50  
LINK         O   PHE B  32                 K     K B 404     1555   1555  2.65  
LINK         K     K B 404                 O   HOH B 584     1555   1555  2.83  
LINK         K     K B 404                 O   HOH B 598     1555   1555  3.41  
LINK         K     K B 404                 O   HOH B 507     1555   1655  2.86  
SITE     1 AC1 20 SER A  11  GLY A  12  ASN A  13  TRP A  14                    
SITE     2 AC1 20 TRP A  39  PHE A  41  VAL A  93  PRO A  94                    
SITE     3 AC1 20 PHE A  97  ILE A 119  LYS A 120  ASN A 151                    
SITE     4 AC1 20 ILE A 152  ALA A 153  HOH A 505  HOH A 527                    
SITE     5 AC1 20 HOH A 538  HOH A 547  HOH A 553  HOH A 554                    
SITE     1 AC2  5 LEU A 131  GLU A 134  ASP A 195  PHE A 242                    
SITE     2 AC2  5 SER A 244                                                     
SITE     1 AC3  4 ALA A 237  LYS A 318  PRO A 346  GLU A 347                    
SITE     1 AC4  4 LYS A 240  PRO A 246  VAL A 247  HOH A 511                    
SITE     1 AC5  7 LYS A 120  GLY A 149  ASN A 151  LYS A 204                    
SITE     2 AC5  7 ASP A 260  THR A 263  THR A 264                               
SITE     1 AC6  6 ALA A  26  ALA A  27  LEU A  29  PHE A  32                    
SITE     2 AC6  6 PRO A  34  ASN A 344                                          
SITE     1 AC7 21 SER B  11  GLY B  12  ASN B  13  TRP B  14                    
SITE     2 AC7 21 TRP B  39  PHE B  41  TYR B  63  VAL B  93                    
SITE     3 AC7 21 PRO B  94  PHE B  97  ILE B 119  LYS B 120                    
SITE     4 AC7 21 ASN B 151  ILE B 152  ALA B 153  HOH B 505                    
SITE     5 AC7 21 HOH B 511  HOH B 517  HOH B 533  HOH B 545                    
SITE     6 AC7 21 HOH B 586                                                     
SITE     1 AC8  4 GLU B 134  ASP B 195  PHE B 242  SER B 244                    
SITE     1 AC9  4 LYS B 318  HIS B 345  PRO B 346  GLU B 347                    
SITE     1 AD1  6 ALA B  26  ALA B  27  LEU B  29  PHE B  32                    
SITE     2 AD1  6 HOH B 507  HOH B 584                                          
CRYST1   63.580   78.780   69.179  90.00 104.32  90.00 P 1 21 1      4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.015728  0.000000  0.004015        0.00000                         
SCALE2      0.000000  0.012694  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.014919        0.00000