PDB Short entry for 6EBT HEADER LYASE 07-AUG-18 6EBT TITLE CRYSTAL STRUCTURE OF RECOMBINANT MUTANT N107T OF HUMAN FUMARASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUMARATE HYDRATASE, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FUMARASE; COMPND 5 EC: 4.2.1.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A-SUMO KEYWDS HSFH, FUMARATE HYDRATASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.A.AJALLA,M.C.NONATO REVDAT 2 11-OCT-23 6EBT 1 REMARK REVDAT 1 21-AUG-19 6EBT 0 JRNL AUTH M.A.A.AJALLA,M.C.NONATO JRNL TITL CRYSTAL STRUCTURE OF RECOMBINANT MUTANT N107T OF HUMAN JRNL TITL 2 FUMARASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1-2575-000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 93.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 53492 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 93.6744 - 6.1368 1.00 2893 169 0.1862 0.1774 REMARK 3 2 6.1368 - 4.8710 1.00 2778 129 0.1680 0.1780 REMARK 3 3 4.8710 - 4.2553 1.00 2711 151 0.1154 0.1379 REMARK 3 4 4.2553 - 3.8662 1.00 2704 136 0.1167 0.1432 REMARK 3 5 3.8662 - 3.5891 1.00 2696 137 0.1314 0.1567 REMARK 3 6 3.5891 - 3.3775 1.00 2672 145 0.1337 0.1840 REMARK 3 7 3.3775 - 3.2083 1.00 2664 135 0.1419 0.1603 REMARK 3 8 3.2083 - 3.0687 1.00 2681 123 0.1404 0.2038 REMARK 3 9 3.0687 - 2.9505 1.00 2670 130 0.1489 0.1781 REMARK 3 10 2.9505 - 2.8487 1.00 2668 127 0.1449 0.2062 REMARK 3 11 2.8487 - 2.7596 1.00 2655 135 0.1466 0.1996 REMARK 3 12 2.7596 - 2.6807 1.00 2627 159 0.1477 0.2019 REMARK 3 13 2.6807 - 2.6102 1.00 2669 120 0.1484 0.1946 REMARK 3 14 2.6102 - 2.5465 1.00 2604 152 0.1598 0.2116 REMARK 3 15 2.5465 - 2.4886 1.00 2619 158 0.1714 0.2425 REMARK 3 16 2.4886 - 2.4356 1.00 2635 147 0.1797 0.2518 REMARK 3 17 2.4356 - 2.3869 1.00 2624 136 0.1814 0.2645 REMARK 3 18 2.3869 - 2.3418 1.00 2641 141 0.1887 0.2106 REMARK 3 19 2.3418 - 2.3000 1.00 2625 126 0.2034 0.2645 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7084 REMARK 3 ANGLE : 0.526 9619 REMARK 3 CHIRALITY : 0.039 1117 REMARK 3 PLANARITY : 0.003 1260 REMARK 3 DIHEDRAL : 9.498 4278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EBT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000234001. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : CHANNEL CUT CRYOGENICALLY COOLED REMARK 200 MONOCHROMATOR CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53547 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 94.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5UPP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M HEPES 16% (M/V) PEG 10000, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.09667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.04833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.07250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 19.02417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 95.12083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.09667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 38.04833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 19.02417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 57.07250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 95.12083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -187.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 94.40800 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -163.51945 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -19.02417 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 788 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 865 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 899 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 915 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 929 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 743 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 844 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 876 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 932 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 935 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 45 REMARK 465 SER A 46 REMARK 465 GLN A 47 REMARK 465 ASN A 48 REMARK 465 ALA B 45 REMARK 465 SER B 46 REMARK 465 GLN B 47 REMARK 465 ASN B 48 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 61 CE NZ REMARK 470 LYS A 80 CE NZ REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 LYS A 122 CE NZ REMARK 470 LYS A 213 NZ REMARK 470 LYS A 296 CD CE NZ REMARK 470 SER A 366 OG REMARK 470 LYS A 447 CE NZ REMARK 470 LYS A 467 CG CD CE NZ REMARK 470 LYS A 470 CG CD CE NZ REMARK 470 LYS A 473 CE NZ REMARK 470 LYS A 477 CD CE NZ REMARK 470 LYS A 483 CG CD CE NZ REMARK 470 GLU A 499 CG CD OE1 OE2 REMARK 470 LYS A 504 CG CD CE NZ REMARK 470 LYS B 61 CD CE NZ REMARK 470 LYS B 80 CD CE NZ REMARK 470 LYS B 115 CD CE NZ REMARK 470 LYS B 122 NZ REMARK 470 SER B 366 OG REMARK 470 GLU B 443 CG CD OE1 OE2 REMARK 470 LYS B 447 CD CE NZ REMARK 470 LYS B 467 CG CD CE NZ REMARK 470 LYS B 470 CE NZ REMARK 470 LYS B 473 CG CD CE NZ REMARK 470 LYS B 477 CG CD CE NZ REMARK 470 GLU B 499 CG CD OE1 OE2 REMARK 470 LYS B 502 NZ REMARK 470 LYS B 504 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS A 235 HG1 THR A 236 1.55 REMARK 500 HH12 ARG B 101 OE1 GLU B 105 1.58 REMARK 500 O HOH A 859 O HOH A 884 1.91 REMARK 500 O HOH A 935 O HOH A 937 2.03 REMARK 500 O HOH B 922 O HOH B 931 2.06 REMARK 500 O HOH B 890 O HOH B 937 2.08 REMARK 500 O HOH B 827 O HOH B 858 2.09 REMARK 500 O HOH A 890 O HOH A 920 2.10 REMARK 500 O HOH B 890 O HOH B 903 2.12 REMARK 500 O HOH A 935 O HOH A 940 2.14 REMARK 500 O HOH B 790 O HOH B 918 2.15 REMARK 500 O HOH A 768 O HOH A 904 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 888 O HOH B 909 12544 1.94 REMARK 500 O HOH B 908 O HOH B 908 9555 1.96 REMARK 500 O HOH A 859 O HOH A 908 12544 2.00 REMARK 500 O HOH B 917 O HOH B 931 9555 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 142 -152.05 -116.91 REMARK 500 THR A 277 -129.70 55.99 REMARK 500 ASN A 284 34.56 70.40 REMARK 500 PHE A 403 -115.91 53.91 REMARK 500 CYS A 434 -65.09 -147.26 REMARK 500 GLN B 142 -151.30 -126.30 REMARK 500 GLN B 142 -151.56 -126.30 REMARK 500 VAL B 206 -55.64 -120.09 REMARK 500 HIS B 235 17.47 59.99 REMARK 500 THR B 277 -133.41 54.70 REMARK 500 MET B 368 68.22 -117.87 REMARK 500 PHE B 403 -112.30 55.09 REMARK 500 VAL B 407 48.79 -109.40 REMARK 500 CYS B 434 -65.81 -145.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 603 DBREF 6EBT A 45 510 UNP P07954 FUMH_HUMAN 45 510 DBREF 6EBT B 45 510 UNP P07954 FUMH_HUMAN 45 510 SEQADV 6EBT THR A 107 UNP P07954 ASN 107 ENGINEERED MUTATION SEQADV 6EBT THR B 107 UNP P07954 ASN 107 ENGINEERED MUTATION SEQRES 1 A 466 ALA SER GLN ASN SER PHE ARG ILE GLU TYR ASP THR PHE SEQRES 2 A 466 GLY GLU LEU LYS VAL PRO ASN ASP LYS TYR TYR GLY ALA SEQRES 3 A 466 GLN THR VAL ARG SER THR MET ASN PHE LYS ILE GLY GLY SEQRES 4 A 466 VAL THR GLU ARG MET PRO THR PRO VAL ILE LYS ALA PHE SEQRES 5 A 466 GLY ILE LEU LYS ARG ALA ALA ALA GLU VAL THR GLN ASP SEQRES 6 A 466 TYR GLY LEU ASP PRO LYS ILE ALA ASN ALA ILE MET LYS SEQRES 7 A 466 ALA ALA ASP GLU VAL ALA GLU GLY LYS LEU ASN ASP HIS SEQRES 8 A 466 PHE PRO LEU VAL VAL TRP GLN THR GLY SER GLY THR GLN SEQRES 9 A 466 THR ASN MET ASN VAL ASN GLU VAL ILE SER ASN ARG ALA SEQRES 10 A 466 ILE GLU MET LEU GLY GLY GLU LEU GLY SER LYS ILE PRO SEQRES 11 A 466 VAL HIS PRO ASN ASP HIS VAL ASN LYS SER GLN SER SER SEQRES 12 A 466 ASN ASP THR PHE PRO THR ALA MET HIS ILE ALA ALA ALA SEQRES 13 A 466 ILE GLU VAL HIS GLU VAL LEU LEU PRO GLY LEU GLN LYS SEQRES 14 A 466 LEU HIS ASP ALA LEU ASP ALA LYS SER LYS GLU PHE ALA SEQRES 15 A 466 GLN ILE ILE LYS ILE GLY ARG THR HIS THR GLN ASP ALA SEQRES 16 A 466 VAL PRO LEU THR LEU GLY GLN GLU PHE SER GLY TYR VAL SEQRES 17 A 466 GLN GLN VAL LYS TYR ALA MET THR ARG ILE LYS ALA ALA SEQRES 18 A 466 MET PRO ARG ILE TYR GLU LEU ALA ALA GLY GLY THR ALA SEQRES 19 A 466 VAL GLY THR GLY LEU ASN THR ARG ILE GLY PHE ALA GLU SEQRES 20 A 466 LYS VAL ALA ALA LYS VAL ALA ALA LEU THR GLY LEU PRO SEQRES 21 A 466 PHE VAL THR ALA PRO ASN LYS PHE GLU ALA LEU ALA ALA SEQRES 22 A 466 HIS ASP ALA LEU VAL GLU LEU SER GLY ALA MET ASN THR SEQRES 23 A 466 THR ALA CYS SER LEU MET LYS ILE ALA ASN ASP ILE ARG SEQRES 24 A 466 PHE LEU GLY SER GLY PRO ARG SER GLY LEU GLY GLU LEU SEQRES 25 A 466 ILE LEU PRO GLU ASN GLU PRO GLY SER SER ILE MET PRO SEQRES 26 A 466 GLY LYS VAL ASN PRO THR GLN CYS GLU ALA MET THR MET SEQRES 27 A 466 VAL ALA ALA GLN VAL MET GLY ASN HIS VAL ALA VAL THR SEQRES 28 A 466 VAL GLY GLY SER ASN GLY HIS PHE GLU LEU ASN VAL PHE SEQRES 29 A 466 LYS PRO MET MET ILE LYS ASN VAL LEU HIS SER ALA ARG SEQRES 30 A 466 LEU LEU GLY ASP ALA SER VAL SER PHE THR GLU ASN CYS SEQRES 31 A 466 VAL VAL GLY ILE GLN ALA ASN THR GLU ARG ILE ASN LYS SEQRES 32 A 466 LEU MET ASN GLU SER LEU MET LEU VAL THR ALA LEU ASN SEQRES 33 A 466 PRO HIS ILE GLY TYR ASP LYS ALA ALA LYS ILE ALA LYS SEQRES 34 A 466 THR ALA HIS LYS ASN GLY SER THR LEU LYS GLU THR ALA SEQRES 35 A 466 ILE GLU LEU GLY TYR LEU THR ALA GLU GLN PHE ASP GLU SEQRES 36 A 466 TRP VAL LYS PRO LYS ASP MET LEU GLY PRO LYS SEQRES 1 B 466 ALA SER GLN ASN SER PHE ARG ILE GLU TYR ASP THR PHE SEQRES 2 B 466 GLY GLU LEU LYS VAL PRO ASN ASP LYS TYR TYR GLY ALA SEQRES 3 B 466 GLN THR VAL ARG SER THR MET ASN PHE LYS ILE GLY GLY SEQRES 4 B 466 VAL THR GLU ARG MET PRO THR PRO VAL ILE LYS ALA PHE SEQRES 5 B 466 GLY ILE LEU LYS ARG ALA ALA ALA GLU VAL THR GLN ASP SEQRES 6 B 466 TYR GLY LEU ASP PRO LYS ILE ALA ASN ALA ILE MET LYS SEQRES 7 B 466 ALA ALA ASP GLU VAL ALA GLU GLY LYS LEU ASN ASP HIS SEQRES 8 B 466 PHE PRO LEU VAL VAL TRP GLN THR GLY SER GLY THR GLN SEQRES 9 B 466 THR ASN MET ASN VAL ASN GLU VAL ILE SER ASN ARG ALA SEQRES 10 B 466 ILE GLU MET LEU GLY GLY GLU LEU GLY SER LYS ILE PRO SEQRES 11 B 466 VAL HIS PRO ASN ASP HIS VAL ASN LYS SER GLN SER SER SEQRES 12 B 466 ASN ASP THR PHE PRO THR ALA MET HIS ILE ALA ALA ALA SEQRES 13 B 466 ILE GLU VAL HIS GLU VAL LEU LEU PRO GLY LEU GLN LYS SEQRES 14 B 466 LEU HIS ASP ALA LEU ASP ALA LYS SER LYS GLU PHE ALA SEQRES 15 B 466 GLN ILE ILE LYS ILE GLY ARG THR HIS THR GLN ASP ALA SEQRES 16 B 466 VAL PRO LEU THR LEU GLY GLN GLU PHE SER GLY TYR VAL SEQRES 17 B 466 GLN GLN VAL LYS TYR ALA MET THR ARG ILE LYS ALA ALA SEQRES 18 B 466 MET PRO ARG ILE TYR GLU LEU ALA ALA GLY GLY THR ALA SEQRES 19 B 466 VAL GLY THR GLY LEU ASN THR ARG ILE GLY PHE ALA GLU SEQRES 20 B 466 LYS VAL ALA ALA LYS VAL ALA ALA LEU THR GLY LEU PRO SEQRES 21 B 466 PHE VAL THR ALA PRO ASN LYS PHE GLU ALA LEU ALA ALA SEQRES 22 B 466 HIS ASP ALA LEU VAL GLU LEU SER GLY ALA MET ASN THR SEQRES 23 B 466 THR ALA CYS SER LEU MET LYS ILE ALA ASN ASP ILE ARG SEQRES 24 B 466 PHE LEU GLY SER GLY PRO ARG SER GLY LEU GLY GLU LEU SEQRES 25 B 466 ILE LEU PRO GLU ASN GLU PRO GLY SER SER ILE MET PRO SEQRES 26 B 466 GLY LYS VAL ASN PRO THR GLN CYS GLU ALA MET THR MET SEQRES 27 B 466 VAL ALA ALA GLN VAL MET GLY ASN HIS VAL ALA VAL THR SEQRES 28 B 466 VAL GLY GLY SER ASN GLY HIS PHE GLU LEU ASN VAL PHE SEQRES 29 B 466 LYS PRO MET MET ILE LYS ASN VAL LEU HIS SER ALA ARG SEQRES 30 B 466 LEU LEU GLY ASP ALA SER VAL SER PHE THR GLU ASN CYS SEQRES 31 B 466 VAL VAL GLY ILE GLN ALA ASN THR GLU ARG ILE ASN LYS SEQRES 32 B 466 LEU MET ASN GLU SER LEU MET LEU VAL THR ALA LEU ASN SEQRES 33 B 466 PRO HIS ILE GLY TYR ASP LYS ALA ALA LYS ILE ALA LYS SEQRES 34 B 466 THR ALA HIS LYS ASN GLY SER THR LEU LYS GLU THR ALA SEQRES 35 B 466 ILE GLU LEU GLY TYR LEU THR ALA GLU GLN PHE ASP GLU SEQRES 36 B 466 TRP VAL LYS PRO LYS ASP MET LEU GLY PRO LYS HET GOL A 601 14 HET GOL A 602 14 HET GOL B 601 14 HET GOL B 602 14 HET GOL B 603 14 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 5(C3 H8 O3) FORMUL 8 HOH *488(H2 O) HELIX 1 AA1 GLY A 69 PHE A 79 1 11 HELIX 2 AA2 GLY A 83 ARG A 87 5 5 HELIX 3 AA3 PRO A 89 GLN A 108 1 20 HELIX 4 AA4 ASP A 109 GLY A 111 5 3 HELIX 5 AA5 ASP A 113 GLU A 129 1 17 HELIX 6 AA6 LEU A 132 PHE A 136 5 5 HELIX 7 AA7 GLY A 146 LEU A 165 1 20 HELIX 8 AA8 SER A 186 VAL A 206 1 21 HELIX 9 AA9 VAL A 206 PHE A 225 1 20 HELIX 10 AB1 LEU A 244 ALA A 265 1 22 HELIX 11 AB2 GLY A 288 GLY A 302 1 15 HELIX 12 AB3 ASN A 310 ALA A 317 1 8 HELIX 13 AB4 HIS A 318 GLY A 346 1 29 HELIX 14 AB5 PRO A 374 ASN A 400 1 27 HELIX 15 AB6 PHE A 408 ASN A 433 1 26 HELIX 16 AB7 CYS A 434 ILE A 438 5 5 HELIX 17 AB8 ASN A 441 SER A 452 1 12 HELIX 18 AB9 LEU A 453 ALA A 458 5 6 HELIX 19 AC1 LEU A 459 GLY A 464 1 6 HELIX 20 AC2 GLY A 464 GLY A 479 1 16 HELIX 21 AC3 THR A 481 LEU A 489 1 9 HELIX 22 AC4 THR A 493 VAL A 501 1 9 HELIX 23 AC5 LYS A 502 MET A 506 5 5 HELIX 24 AC6 GLY B 69 PHE B 79 1 11 HELIX 25 AC7 GLY B 83 ARG B 87 5 5 HELIX 26 AC8 PRO B 89 GLN B 108 1 20 HELIX 27 AC9 ASP B 109 GLY B 111 5 3 HELIX 28 AD1 ASP B 113 GLU B 129 1 17 HELIX 29 AD2 LEU B 132 PHE B 136 5 5 HELIX 30 AD3 GLY B 146 LEU B 165 1 20 HELIX 31 AD4 ASP B 189 VAL B 206 1 18 HELIX 32 AD5 VAL B 206 PHE B 225 1 20 HELIX 33 AD6 LEU B 244 ALA B 265 1 22 HELIX 34 AD7 GLY B 288 GLY B 302 1 15 HELIX 35 AD8 ASN B 310 ALA B 317 1 8 HELIX 36 AD9 HIS B 318 GLY B 346 1 29 HELIX 37 AE1 PRO B 374 ASN B 400 1 27 HELIX 38 AE2 PHE B 408 CYS B 434 1 27 HELIX 39 AE3 VAL B 435 ILE B 438 5 4 HELIX 40 AE4 ASN B 441 SER B 452 1 12 HELIX 41 AE5 LEU B 453 ALA B 458 5 6 HELIX 42 AE6 LEU B 459 GLY B 464 1 6 HELIX 43 AE7 GLY B 464 GLY B 479 1 16 HELIX 44 AE8 THR B 481 LEU B 489 1 9 HELIX 45 AE9 THR B 493 VAL B 501 1 9 HELIX 46 AF1 LYS B 502 MET B 506 5 5 SHEET 1 AA1 2 PHE A 50 ASP A 55 0 SHEET 2 AA1 2 GLY A 58 PRO A 63 -1 O LEU A 60 N GLU A 53 SHEET 1 AA2 2 ILE A 229 THR A 234 0 SHEET 2 AA2 2 GLN A 237 THR A 243 -1 O ALA A 239 N GLY A 232 SHEET 1 AA3 2 GLU A 271 LEU A 272 0 SHEET 2 AA3 2 VAL A 306 THR A 307 1 O VAL A 306 N LEU A 272 SHEET 1 AA4 2 LEU A 356 ILE A 357 0 SHEET 2 AA4 2 GLN A 439 ALA A 440 -1 O GLN A 439 N ILE A 357 SHEET 1 AA5 2 PHE B 50 ASP B 55 0 SHEET 2 AA5 2 GLY B 58 PRO B 63 -1 O VAL B 62 N ARG B 51 SHEET 1 AA6 2 ILE B 229 THR B 234 0 SHEET 2 AA6 2 GLN B 237 THR B 243 -1 O LEU B 242 N LYS B 230 SHEET 1 AA7 2 GLU B 271 LEU B 272 0 SHEET 2 AA7 2 VAL B 306 THR B 307 1 O VAL B 306 N LEU B 272 SHEET 1 AA8 2 LEU B 356 ILE B 357 0 SHEET 2 AA8 2 GLN B 439 ALA B 440 -1 O GLN B 439 N ILE B 357 CISPEP 1 ILE A 173 PRO A 174 0 -1.07 CISPEP 2 GLY A 348 PRO A 349 0 5.00 CISPEP 3 ILE B 173 PRO B 174 0 -4.09 CISPEP 4 GLY B 348 PRO B 349 0 6.86 SITE 1 AC1 4 GLY A 83 VAL A 84 ARG A 421 HOH A 806 SITE 1 AC2 3 SER A 186 SER A 187 HOH A 859 SITE 1 AC3 2 GLU B 129 HOH B 779 SITE 1 AC4 5 ALA B 295 LYS B 296 THR B 307 HOH B 704 SITE 2 AC4 5 HOH B 800 SITE 1 AC5 3 GLY B 83 VAL B 84 ARG B 421 CRYST1 188.816 188.816 114.145 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005296 0.003058 0.000000 0.00000 SCALE2 0.000000 0.006115 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008761 0.00000