PDB Short entry for 6FIE HEADER METAL BINDING PROTEIN 18-JAN-18 6FIE TITLE CRYSTALLOGRAPHIC STRUCTURE OF CALCIUM LOADED CALBINDIN-D28K. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALBINDIN; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: CALBINDIN D28,D-28K,VITAMIN D-DEPENDENT CALCIUM-BINDING COMPND 5 PROTEIN,AVIAN-TYPE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CALB1, CAB27; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS CALCIUM BINDING PROTEIN, BUFFER, IMPASE, EF-HAND, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.W.NOBLE,R.ALMALKI,S.M.ROE,A.WAGNER,R.DUMANC,J.R.ATACK REVDAT 2 17-OCT-18 6FIE 1 JRNL REVDAT 1 10-OCT-18 6FIE 0 JRNL AUTH J.W.NOBLE,R.ALMALKI,S.M.ROE,A.WAGNER,R.DUMAN,J.R.ATACK JRNL TITL THE X-RAY STRUCTURE OF HUMAN CALBINDIN-D28K: AN IMPROVED JRNL TITL 2 MODEL. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 74 1008 2018 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 30289411 JRNL DOI 10.1107/S2059798318011610 REMARK 2 REMARK 2 RESOLUTION. 1.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 41490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 2023 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.51 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.66 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2804 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2230 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2689 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE : 0.2290 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 115 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1996 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 177 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24250 REMARK 3 B22 (A**2) : 0.10910 REMARK 3 B33 (A**2) : 0.13340 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.083 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.085 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.091 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.082 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3980 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7169 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 896 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 60 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 582 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3980 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 268 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 4 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4472 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.01 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.38 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.07 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FIE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008384. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : DCM REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41505 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.510 REMARK 200 RESOLUTION RANGE LOW (A) : 29.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.85200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: I23 PARTIAL MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SAMPLE: 41.6MG/ML CALBINDIN-D28K IN REMARK 280 1MM CACL 5MM TRIS PH8.0 (HCL). RESERVOIR: 0.1M POTASSIUM REMARK 280 THIOCYANATE AND 30% W/V PEG 2000 MME., VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 42.30850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.11100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.30850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.11100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 66 REMARK 465 GLN B 67 REMARK 465 ARG B 68 REMARK 465 ASP B 69 REMARK 465 ASP B 70 REMARK 465 GLY B 71 REMARK 465 GLY B 259 REMARK 465 ASP B 260 REMARK 465 ASN B 261 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 LYS B 34 CD CE NZ REMARK 470 GLN B 37 CG CD OE1 NE2 REMARK 470 GLN B 41 OE1 NE2 REMARK 470 GLN B 45 OE1 NE2 REMARK 470 LYS B 48 CD CE NZ REMARK 470 GLU B 53 CG CD OE1 OE2 REMARK 470 ASP B 63 CG OD1 OD2 REMARK 470 GLN B 64 O OE1 NE2 REMARK 470 TYR B 65 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 72 CE NZ REMARK 470 LYS B 98 CD CE NZ REMARK 470 LYS B 128 CE NZ REMARK 470 LYS B 136 NZ REMARK 470 ASP B 140 OD1 OD2 REMARK 470 GLN B 174 OE1 NE2 REMARK 470 LYS B 180 CD CE NZ REMARK 470 GLU B 190 CD OE1 OE2 REMARK 470 LYS B 216 CE NZ REMARK 470 LYS B 223 CD CE NZ REMARK 470 GLN B 224 CG CD OE1 NE2 REMARK 470 ASP B 225 OD1 OD2 REMARK 470 ILE B 228 CG1 CG2 CD1 REMARK 470 LYS B 236 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 64 36.78 -94.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 24 OD1 REMARK 620 2 ASP B 26 OD1 83.7 REMARK 620 3 SER B 28 OG 91.1 72.8 REMARK 620 4 TYR B 30 O 88.9 152.1 80.4 REMARK 620 5 TYR B 30 O 92.0 152.6 80.2 3.1 REMARK 620 6 GLU B 35 OE1 110.5 125.0 152.2 82.8 81.9 REMARK 620 7 GLU B 35 OE2 96.9 74.6 145.3 133.2 132.8 51.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 111 OD1 REMARK 620 2 ASP B 113 OD1 80.2 REMARK 620 3 SER B 115 OG 89.1 78.9 REMARK 620 4 PHE B 117 O 87.0 152.3 76.3 REMARK 620 5 GLU B 119 OE1 171.3 99.3 82.3 89.6 REMARK 620 6 GLU B 122 OE1 107.4 128.0 149.8 79.3 79.9 REMARK 620 7 GLU B 122 OE2 95.8 75.0 152.2 131.2 92.5 53.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 155 OD1 REMARK 620 2 ASN B 157 OD1 80.0 REMARK 620 3 ASP B 159 OD1 84.2 78.6 REMARK 620 4 LYS B 161 O 86.3 150.2 73.8 REMARK 620 5 GLU B 166 OE1 103.9 125.3 155.5 83.6 REMARK 620 6 GLU B 166 OE2 92.7 74.8 153.3 132.6 50.7 REMARK 620 7 HOH B 439 O 166.1 90.4 84.0 97.4 89.9 94.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 199 OD1 REMARK 620 2 ASP B 201 OD1 84.4 REMARK 620 3 ASN B 203 OD1 86.7 76.8 REMARK 620 4 TYR B 205 O 81.9 154.6 81.2 REMARK 620 5 GLU B 210 OE1 114.6 123.9 150.1 81.3 REMARK 620 6 GLU B 210 OE2 90.5 78.2 154.9 123.0 51.2 REMARK 620 7 HOH B 442 O 163.2 79.5 85.0 111.1 78.9 90.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN B 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2G9B RELATED DB: PDB REMARK 900 NMR (RAT) DBREF 6FIE B 1 261 UNP P05937 CALB1_HUMAN 1 261 SEQADV 6FIE GLY B -2 UNP P05937 EXPRESSION TAG SEQADV 6FIE PRO B -1 UNP P05937 EXPRESSION TAG SEQADV 6FIE HIS B 0 UNP P05937 EXPRESSION TAG SEQRES 1 B 264 GLY PRO HIS MET ALA GLU SER HIS LEU GLN SER SER LEU SEQRES 2 B 264 ILE THR ALA SER GLN PHE PHE GLU ILE TRP LEU HIS PHE SEQRES 3 B 264 ASP ALA ASP GLY SER GLY TYR LEU GLU GLY LYS GLU LEU SEQRES 4 B 264 GLN ASN LEU ILE GLN GLU LEU GLN GLN ALA ARG LYS LYS SEQRES 5 B 264 ALA GLY LEU GLU LEU SER PRO GLU MET LYS THR PHE VAL SEQRES 6 B 264 ASP GLN TYR GLY GLN ARG ASP ASP GLY LYS ILE GLY ILE SEQRES 7 B 264 VAL GLU LEU ALA HIS VAL LEU PRO THR GLU GLU ASN PHE SEQRES 8 B 264 LEU LEU LEU PHE ARG CYS GLN GLN LEU LYS SER CYS GLU SEQRES 9 B 264 GLU PHE MET LYS THR TRP ARG LYS TYR ASP THR ASP HIS SEQRES 10 B 264 SER GLY PHE ILE GLU THR GLU GLU LEU LYS ASN PHE LEU SEQRES 11 B 264 LYS ASP LEU LEU GLU LYS ALA ASN LYS THR VAL ASP ASP SEQRES 12 B 264 THR LYS LEU ALA GLU TYR THR ASP LEU MET LEU LYS LEU SEQRES 13 B 264 PHE ASP SER ASN ASN ASP GLY LYS LEU GLU LEU THR GLU SEQRES 14 B 264 MET ALA ARG LEU LEU PRO VAL GLN GLU ASN PHE LEU LEU SEQRES 15 B 264 LYS PHE GLN GLY ILE LYS MET CYS GLY LYS GLU PHE ASN SEQRES 16 B 264 LYS ALA PHE GLU LEU TYR ASP GLN ASP GLY ASN GLY TYR SEQRES 17 B 264 ILE ASP GLU ASN GLU LEU ASP ALA LEU LEU LYS ASP LEU SEQRES 18 B 264 CYS GLU LYS ASN LYS GLN ASP LEU ASP ILE ASN ASN ILE SEQRES 19 B 264 THR THR TYR LYS LYS ASN ILE MET ALA LEU SER ASP GLY SEQRES 20 B 264 GLY LYS LEU TYR ARG THR ASP LEU ALA LEU ILE LEU CYS SEQRES 21 B 264 ALA GLY ASP ASN HET CA B 301 1 HET CA B 302 1 HET CA B 303 1 HET CA B 304 1 HET SCN B 305 3 HETNAM CA CALCIUM ION HETNAM SCN THIOCYANATE ION FORMUL 2 CA 4(CA 2+) FORMUL 6 SCN C N S 1- FORMUL 7 HOH *177(H2 O) HELIX 1 AA1 GLY B -2 HIS B 0 5 3 HELIX 2 AA2 MET B 1 LEU B 6 1 6 HELIX 3 AA3 THR B 12 ASP B 24 1 13 HELIX 4 AA4 GLY B 33 ALA B 50 1 18 HELIX 5 AA5 SER B 55 GLN B 64 1 10 HELIX 6 AA6 GLY B 74 LEU B 82 1 9 HELIX 7 AA7 GLU B 85 LEU B 91 1 7 HELIX 8 AA8 PHE B 92 ARG B 93 5 2 HELIX 9 AA9 CYS B 94 LYS B 98 5 5 HELIX 10 AB1 SER B 99 ASP B 111 1 13 HELIX 11 AB2 GLU B 119 ALA B 134 1 16 HELIX 12 AB3 ASP B 139 ASP B 155 1 17 HELIX 13 AB4 GLU B 163 ARG B 169 1 7 HELIX 14 AB5 ASN B 176 LYS B 185 5 10 HELIX 15 AB6 CYS B 187 ASP B 199 1 13 HELIX 16 AB7 ASP B 207 ASN B 222 1 16 HELIX 17 AB8 ASP B 227 ASN B 229 5 3 HELIX 18 AB9 ASN B 230 ALA B 240 1 11 HELIX 19 AC1 TYR B 248 CYS B 257 1 10 LINK OD1 ASP B 24 CA CA B 304 1555 1555 2.23 LINK OD1 ASP B 26 CA CA B 304 1555 1555 2.28 LINK OG SER B 28 CA CA B 304 1555 1555 2.50 LINK O ATYR B 30 CA CA B 304 1555 1555 2.31 LINK O BTYR B 30 CA CA B 304 1555 1555 2.32 LINK OE1 GLU B 35 CA CA B 304 1555 1555 2.36 LINK OE2 GLU B 35 CA CA B 304 1555 1555 2.66 LINK OD1 ASP B 111 CA CA B 302 1555 1555 2.34 LINK OD1 ASP B 113 CA CA B 302 1555 1555 2.38 LINK OG SER B 115 CA CA B 302 1555 1555 2.50 LINK O PHE B 117 CA CA B 302 1555 1555 2.42 LINK OE1 GLU B 119 CA CA B 302 1555 1555 2.32 LINK OE1 GLU B 122 CA CA B 302 1555 1555 2.41 LINK OE2 GLU B 122 CA CA B 302 1555 1555 2.51 LINK OD1 ASP B 155 CA CA B 303 1555 1555 2.30 LINK OD1 ASN B 157 CA CA B 303 1555 1555 2.30 LINK OD1 ASP B 159 CA CA B 303 1555 1555 2.32 LINK O LYS B 161 CA CA B 303 1555 1555 2.33 LINK OE1 GLU B 166 CA CA B 303 1555 1555 2.51 LINK OE2 GLU B 166 CA CA B 303 1555 1555 2.62 LINK OD1 ASP B 199 CA CA B 301 1555 1555 2.36 LINK OD1 ASP B 201 CA CA B 301 1555 1555 2.32 LINK OD1 ASN B 203 CA CA B 301 1555 1555 2.32 LINK O TYR B 205 CA CA B 301 1555 1555 2.35 LINK OE1 GLU B 210 CA CA B 301 1555 1555 2.57 LINK OE2 GLU B 210 CA CA B 301 1555 1555 2.53 LINK CA CA B 301 O HOH B 442 1555 1555 2.39 LINK CA CA B 303 O HOH B 439 1555 1555 2.32 SITE 1 AC1 6 ASP B 199 ASP B 201 ASN B 203 TYR B 205 SITE 2 AC1 6 GLU B 210 HOH B 442 SITE 1 AC2 6 ASP B 111 ASP B 113 SER B 115 PHE B 117 SITE 2 AC2 6 GLU B 119 GLU B 122 SITE 1 AC3 6 ASP B 155 ASN B 157 ASP B 159 LYS B 161 SITE 2 AC3 6 GLU B 166 HOH B 439 SITE 1 AC4 5 ASP B 24 ASP B 26 SER B 28 TYR B 30 SITE 2 AC4 5 GLU B 35 SITE 1 AC5 4 ALA B 50 GLY B 51 ASN B 203 TYR B 205 CRYST1 84.617 104.222 29.614 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011818 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009595 0.000000 0.00000 SCALE3 0.000000 0.000000 0.033768 0.00000